2024-12-04 16:34:46,164 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 16:34:47,905 Running on GPU
2024-12-04 16:34:52,482 Found 6 citations for tools or databases
2024-12-04 16:34:52,482 Query 1/1: AHR_DNAJA2 (length 1260)
2024-12-04 16:34:53,059 Sleeping for 8s. Reason: PENDING
2024-12-04 16:35:01,318 Sleeping for 5s. Reason: PENDING
2024-12-04 16:35:06,569 Sleeping for 8s. Reason: PENDING
2024-12-04 16:35:14,832 Sleeping for 5s. Reason: PENDING
2024-12-04 16:35:20,095 Sleeping for 6s. Reason: PENDING
2024-12-04 16:35:26,358 Sleeping for 5s. Reason: PENDING
2024-12-04 16:35:31,612 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:35:38,872 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:35:44,123 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:35:52,379 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:36:00,635 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:36:07,895 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:36:14,156 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:36:21,410 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:36:29,673 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:36:37,939 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:36:44,193 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:36:52,449 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:36:57,698 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:37:06,962 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:37:12,212 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:37:18,465 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:37:25,730 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:37:31,990 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:37:38,250 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:37:48,512 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:37:55,769 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:38:06,025 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:38:14,286 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:38:23,539 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:38:28,796 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:38:39,051 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:38:46,306 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:38:54,561 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:39:02,819 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:39:11,072 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:39:16,329 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:39:26,583 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:39:33,838 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:39:41,102 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:39:51,367 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:40:00,634 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:40:09,894 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:40:20,446 Sleeping for 8s. Reason: PENDING
2024-12-04 16:40:28,704 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:40:34,959 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:40:40,212 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:40:49,469 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:40:57,728 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:41:06,982 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:41:15,244 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:41:22,505 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:41:27,762 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:41:36,021 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:41:45,278 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:41:50,533 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:41:59,793 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:42:05,051 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:42:14,310 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:42:24,570 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:42:34,834 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:42:42,100 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:42:47,348 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:42:56,602 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:43:02,859 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:43:12,550 Setting max_seq=508, max_extra_seq=2048
2024-12-04 16:45:58,559 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=48.8 pTM=0.305 ipTM=0.276
2024-12-04 16:46:38,453 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=48.8 pTM=0.334 ipTM=0.303 tol=20.5
2024-12-04 16:47:18,455 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.5 pTM=0.338 ipTM=0.317 tol=10.5
2024-12-04 16:47:58,548 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.8 pTM=0.33 ipTM=0.305 tol=5.53
2024-12-04 16:48:38,679 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49.7 pTM=0.331 ipTM=0.312 tol=3.45
2024-12-04 16:49:18,821 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=49.3 pTM=0.327 ipTM=0.292 tol=3.21
2024-12-04 16:49:58,964 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.8 pTM=0.334 ipTM=0.308 tol=2.92
2024-12-04 16:50:39,116 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.9 pTM=0.331 ipTM=0.301 tol=2.27
2024-12-04 16:51:19,304 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50 pTM=0.331 ipTM=0.307 tol=1.83
2024-12-04 16:51:59,479 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49.5 pTM=0.324 ipTM=0.282 tol=2.58
2024-12-04 16:52:39,660 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=49.4 pTM=0.323 ipTM=0.285 tol=2.92
2024-12-04 16:53:19,823 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.5 pTM=0.322 ipTM=0.279 tol=1.87
2024-12-04 16:53:59,988 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.2 pTM=0.322 ipTM=0.282 tol=1.77
2024-12-04 16:54:40,168 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.7 pTM=0.322 ipTM=0.277 tol=1.93
2024-12-04 16:55:20,341 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.3 pTM=0.326 ipTM=0.294 tol=2.36
2024-12-04 16:56:00,511 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.5 pTM=0.32 ipTM=0.274 tol=1.75
2024-12-04 16:56:40,685 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.3 pTM=0.322 ipTM=0.269 tol=1.48
2024-12-04 16:57:20,854 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.5 pTM=0.319 ipTM=0.271 tol=1.52
2024-12-04 16:58:01,017 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.3 pTM=0.319 ipTM=0.27 tol=1.79
2024-12-04 16:58:41,177 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.2 pTM=0.317 ipTM=0.264 tol=1.44
2024-12-04 16:59:21,329 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.8 pTM=0.32 ipTM=0.272 tol=1.74
2024-12-04 17:00:01,474 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.5 pTM=0.326 ipTM=0.291 tol=1.79
2024-12-04 17:00:41,626 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.2 pTM=0.323 ipTM=0.286 tol=1.64
2024-12-04 17:01:21,791 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.1 pTM=0.317 ipTM=0.264 tol=1.83
2024-12-04 17:02:01,986 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.6 pTM=0.316 ipTM=0.266 tol=2.4
2024-12-04 17:02:42,185 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.9 pTM=0.319 ipTM=0.274 tol=1.9
2024-12-04 17:03:22,359 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.7 pTM=0.317 ipTM=0.27 tol=2.29
2024-12-04 17:04:02,515 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.4 pTM=0.317 ipTM=0.263 tol=1.81
2024-12-04 17:04:42,678 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49 pTM=0.309 ipTM=0.245 tol=1.77
2024-12-04 17:05:22,785 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.7 pTM=0.314 ipTM=0.258 tol=2.2
2024-12-04 17:06:02,912 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.4 pTM=0.318 ipTM=0.272 tol=2.96
2024-12-04 17:06:02,913 alphafold2_multimer_v3_model_1_seed_000 took 1366.8s (30 recycles)
2024-12-04 17:06:43,905 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=47.8 pTM=0.298 ipTM=0.162
2024-12-04 17:07:24,037 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.9 pTM=0.29 ipTM=0.157 tol=16.3
2024-12-04 17:08:04,207 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.5 pTM=0.29 ipTM=0.183 tol=16.4
2024-12-04 17:08:44,444 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=50.3 pTM=0.289 ipTM=0.176 tol=11.1
2024-12-04 17:09:24,737 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.8 pTM=0.286 ipTM=0.158 tol=10
2024-12-04 17:10:05,012 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=49.8 pTM=0.286 ipTM=0.159 tol=6.68
2024-12-04 17:10:45,297 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.9 pTM=0.285 ipTM=0.158 tol=6.53
2024-12-04 17:11:25,541 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.1 pTM=0.288 ipTM=0.158 tol=6.5
2024-12-04 17:12:05,769 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=50 pTM=0.287 ipTM=0.158 tol=3.73
2024-12-04 17:12:45,989 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49.9 pTM=0.286 ipTM=0.157 tol=2.64
2024-12-04 17:13:26,219 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.2 pTM=0.287 ipTM=0.159 tol=2.54
2024-12-04 17:14:06,454 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.9 pTM=0.286 ipTM=0.159 tol=3.13
2024-12-04 17:14:46,689 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49.9 pTM=0.284 ipTM=0.157 tol=2.14
2024-12-04 17:15:26,925 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50 pTM=0.287 ipTM=0.158 tol=3.22
2024-12-04 17:16:07,149 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49.8 pTM=0.286 ipTM=0.158 tol=2.73
2024-12-04 17:16:47,379 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.9 pTM=0.286 ipTM=0.158 tol=2.41
2024-12-04 17:17:27,625 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.8 pTM=0.287 ipTM=0.16 tol=2.31
2024-12-04 17:18:07,868 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.1 pTM=0.288 ipTM=0.161 tol=2.56
2024-12-04 17:18:48,109 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.8 pTM=0.287 ipTM=0.16 tol=2.41
2024-12-04 17:19:28,332 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.8 pTM=0.285 ipTM=0.16 tol=2.51
2024-12-04 17:20:08,546 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.7 pTM=0.286 ipTM=0.158 tol=2.87
2024-12-04 17:20:48,729 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50 pTM=0.287 ipTM=0.158 tol=2.2
2024-12-04 17:21:28,894 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.5 pTM=0.285 ipTM=0.159 tol=2.21
2024-12-04 17:22:09,076 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49.9 pTM=0.286 ipTM=0.157 tol=2.17
2024-12-04 17:22:49,302 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=49.8 pTM=0.286 ipTM=0.159 tol=1.99
2024-12-04 17:23:29,507 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50 pTM=0.287 ipTM=0.16 tol=2.39
2024-12-04 17:24:09,710 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=49.9 pTM=0.287 ipTM=0.157 tol=2.2
2024-12-04 17:24:49,900 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.5 pTM=0.286 ipTM=0.157 tol=2.44
2024-12-04 17:25:30,096 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49.9 pTM=0.284 ipTM=0.157 tol=2.86
2024-12-04 17:26:10,303 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.4 pTM=0.287 ipTM=0.157 tol=2.68
2024-12-04 17:26:50,531 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50.2 pTM=0.287 ipTM=0.157 tol=2.4
2024-12-04 17:26:50,532 alphafold2_multimer_v3_model_2_seed_000 took 1246.7s (30 recycles)
2024-12-04 17:27:31,852 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.4 pTM=0.293 ipTM=0.153
2024-12-04 17:28:12,112 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.7 pTM=0.299 ipTM=0.173 tol=18.6
2024-12-04 17:28:52,515 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.7 pTM=0.28 ipTM=0.145 tol=15.4
2024-12-04 17:29:32,941 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.4 pTM=0.281 ipTM=0.15 tol=12.4
2024-12-04 17:30:13,382 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.2 pTM=0.289 ipTM=0.161 tol=13.7
2024-12-04 17:30:53,762 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.2 pTM=0.285 ipTM=0.154 tol=12.8
2024-12-04 17:31:34,201 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.2 pTM=0.289 ipTM=0.174 tol=10.9
2024-12-04 17:32:14,623 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.4 pTM=0.286 ipTM=0.149 tol=10.7
2024-12-04 17:32:55,080 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=46.7 pTM=0.283 ipTM=0.16 tol=14.7
2024-12-04 17:33:35,472 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.1 pTM=0.287 ipTM=0.156 tol=9.66
2024-12-04 17:34:15,857 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.6 pTM=0.286 ipTM=0.163 tol=8.13
2024-12-04 17:34:56,245 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.8 pTM=0.284 ipTM=0.15 tol=8.4
2024-12-04 17:35:36,666 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.2 pTM=0.287 ipTM=0.158 tol=9.66
2024-12-04 17:36:17,046 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48.3 pTM=0.292 ipTM=0.165 tol=13.8
2024-12-04 17:36:57,405 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48.6 pTM=0.293 ipTM=0.181 tol=9.84
2024-12-04 17:37:37,746 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48.9 pTM=0.299 ipTM=0.19 tol=7.8
2024-12-04 17:38:18,110 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49 pTM=0.3 ipTM=0.178 tol=5.54
2024-12-04 17:38:58,514 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48.5 pTM=0.29 ipTM=0.161 tol=4.77
2024-12-04 17:39:38,922 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48.4 pTM=0.305 ipTM=0.344 tol=9.27
2024-12-04 17:40:19,312 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=48.4 pTM=0.297 ipTM=0.167 tol=5.76
2024-12-04 17:40:59,741 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.2 pTM=0.292 ipTM=0.168 tol=8.63
2024-12-04 17:41:40,170 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=48.8 pTM=0.29 ipTM=0.159 tol=10.4
2024-12-04 17:42:20,617 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.1 pTM=0.293 ipTM=0.264 tol=11.1
2024-12-04 17:43:01,021 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.5 pTM=0.296 ipTM=0.172 tol=10.1
2024-12-04 17:43:41,460 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.8 pTM=0.288 ipTM=0.161 tol=9.91
2024-12-04 17:44:21,934 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47.6 pTM=0.283 ipTM=0.153 tol=11.9
2024-12-04 17:45:02,348 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=48.7 pTM=0.289 ipTM=0.155 tol=9.5
2024-12-04 17:45:42,754 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=48 pTM=0.289 ipTM=0.158 tol=8.62
2024-12-04 17:46:23,177 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48 pTM=0.289 ipTM=0.183 tol=10.4
2024-12-04 17:47:03,593 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.8 pTM=0.29 ipTM=0.156 tol=9.59
2024-12-04 17:47:44,024 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48 pTM=0.295 ipTM=0.224 tol=8.85
2024-12-04 17:47:44,025 alphafold2_multimer_v3_model_3_seed_000 took 1252.5s (30 recycles)
2024-12-04 17:48:25,262 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47 pTM=0.34 ipTM=0.31
2024-12-04 17:49:05,573 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.2 pTM=0.325 ipTM=0.21 tol=11.8
2024-12-04 17:49:45,885 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.3 pTM=0.34 ipTM=0.289 tol=7.53
2024-12-04 17:50:26,213 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.6 pTM=0.325 ipTM=0.242 tol=12.4
2024-12-04 17:51:06,569 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.2 pTM=0.337 ipTM=0.292 tol=6.06
2024-12-04 17:51:46,891 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.7 pTM=0.33 ipTM=0.25 tol=4.77
2024-12-04 17:52:27,222 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.2 pTM=0.332 ipTM=0.26 tol=3.39
2024-12-04 17:53:07,563 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49 pTM=0.325 ipTM=0.232 tol=2.61
2024-12-04 17:53:47,902 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.9 pTM=0.323 ipTM=0.228 tol=3.13
2024-12-04 17:54:28,289 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.4 pTM=0.311 ipTM=0.197 tol=3.66
2024-12-04 17:55:08,656 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.6 pTM=0.324 ipTM=0.23 tol=4.33
2024-12-04 17:55:49,027 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.8 pTM=0.315 ipTM=0.207 tol=4.54
2024-12-04 17:56:29,440 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48 pTM=0.303 ipTM=0.177 tol=3.62
2024-12-04 17:57:09,833 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47.6 pTM=0.3 ipTM=0.171 tol=8.58
2024-12-04 17:57:50,261 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.4 pTM=0.298 ipTM=0.171 tol=5.24
2024-12-04 17:58:30,727 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.4 pTM=0.294 ipTM=0.175 tol=16.6
2024-12-04 17:59:11,100 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.8 pTM=0.307 ipTM=0.18 tol=10.1
2024-12-04 17:59:51,464 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47.5 pTM=0.297 ipTM=0.173 tol=7.36
2024-12-04 18:00:31,903 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.5 pTM=0.313 ipTM=0.204 tol=18.9
2024-12-04 18:01:12,275 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48 pTM=0.303 ipTM=0.177 tol=9.69
2024-12-04 18:01:52,708 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47 pTM=0.296 ipTM=0.174 tol=7.35
2024-12-04 18:02:33,059 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.9 pTM=0.344 ipTM=0.323 tol=8.14
2024-12-04 18:03:13,406 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.6 pTM=0.314 ipTM=0.2 tol=4.3
2024-12-04 18:03:53,858 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.6 pTM=0.296 ipTM=0.156 tol=17.5
2024-12-04 18:04:34,259 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.8 pTM=0.306 ipTM=0.165 tol=11
2024-12-04 18:05:14,665 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.5 pTM=0.298 ipTM=0.163 tol=6.71
2024-12-04 18:05:55,104 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.8 pTM=0.297 ipTM=0.158 tol=8.02
2024-12-04 18:06:35,541 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48 pTM=0.296 ipTM=0.156 tol=5.8
2024-12-04 18:07:15,995 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47.4 pTM=0.299 ipTM=0.161 tol=6.03
2024-12-04 18:07:56,398 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.5 pTM=0.296 ipTM=0.158 tol=7.32
2024-12-04 18:08:36,812 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.9 pTM=0.295 ipTM=0.153 tol=5.24
2024-12-04 18:08:36,814 alphafold2_multimer_v3_model_4_seed_000 took 1251.8s (30 recycles)
2024-12-04 18:09:18,116 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48.3 pTM=0.32 ipTM=0.24
2024-12-04 18:09:58,425 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.7 pTM=0.305 ipTM=0.174 tol=14.4
2024-12-04 18:10:38,711 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=49.7 pTM=0.355 ipTM=0.328 tol=6.59
2024-12-04 18:11:19,004 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49.2 pTM=0.327 ipTM=0.24 tol=2.91
2024-12-04 18:11:59,314 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=49.1 pTM=0.327 ipTM=0.244 tol=5.75
2024-12-04 18:12:39,634 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=49.4 pTM=0.318 ipTM=0.222 tol=4.88
2024-12-04 18:13:19,955 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.1 pTM=0.319 ipTM=0.221 tol=4.73
2024-12-04 18:14:00,294 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=48.9 pTM=0.308 ipTM=0.197 tol=3.09
2024-12-04 18:14:40,603 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.3 pTM=0.322 ipTM=0.229 tol=3.96
2024-12-04 18:15:20,902 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.2 pTM=0.307 ipTM=0.199 tol=3.38
2024-12-04 18:16:01,207 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=48.9 pTM=0.33 ipTM=0.272 tol=2.24
2024-12-04 18:16:41,517 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.1 pTM=0.308 ipTM=0.21 tol=2.07
2024-12-04 18:17:21,823 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.3 pTM=0.327 ipTM=0.273 tol=3.76
2024-12-04 18:18:02,111 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.1 pTM=0.309 ipTM=0.209 tol=4.78
2024-12-04 18:18:42,413 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49 pTM=0.329 ipTM=0.279 tol=2.85
2024-12-04 18:19:22,698 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=48.9 pTM=0.306 ipTM=0.21 tol=4.04
2024-12-04 18:20:03,019 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.2 pTM=0.313 ipTM=0.224 tol=4.95
2024-12-04 18:20:43,331 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=49 pTM=0.305 ipTM=0.202 tol=5.06
2024-12-04 18:21:23,648 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=48.8 pTM=0.313 ipTM=0.224 tol=2.59
2024-12-04 18:22:03,967 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=48.7 pTM=0.302 ipTM=0.193 tol=1.9
2024-12-04 18:22:44,248 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.3 pTM=0.324 ipTM=0.245 tol=2.41
2024-12-04 18:23:24,568 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=49.1 pTM=0.306 ipTM=0.204 tol=4.37
2024-12-04 18:24:04,870 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=48.8 pTM=0.329 ipTM=0.281 tol=2.92
2024-12-04 18:24:45,187 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=49.1 pTM=0.308 ipTM=0.204 tol=4.62
2024-12-04 18:25:25,540 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49 pTM=0.307 ipTM=0.205 tol=4.83
2024-12-04 18:26:05,859 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.7 pTM=0.302 ipTM=0.19 tol=4.84
2024-12-04 18:26:46,177 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=48.6 pTM=0.321 ipTM=0.252 tol=5.46
2024-12-04 18:27:26,506 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=48.8 pTM=0.305 ipTM=0.202 tol=4.96
2024-12-04 18:28:06,856 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=48.7 pTM=0.3 ipTM=0.186 tol=2.47
2024-12-04 18:28:47,210 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=48.8 pTM=0.302 ipTM=0.189 tol=4.29
2024-12-04 18:29:27,555 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=48.6 pTM=0.303 ipTM=0.191 tol=3.93
2024-12-04 18:29:27,557 alphafold2_multimer_v3_model_5_seed_000 took 1249.8s (30 recycles)
2024-12-04 18:29:28,524 reranking models by 'multimer' metric
2024-12-04 18:29:32,553 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 18:32:04,183 Relaxation took 155.7s
2024-12-04 18:32:04,184 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.4 pTM=0.318 ipTM=0.272
2024-12-04 18:35:08,985 Relaxation took 184.8s
2024-12-04 18:35:08,985 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48 pTM=0.295 ipTM=0.224
2024-12-04 18:37:30,343 Relaxation took 141.4s
2024-12-04 18:37:30,343 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=48.6 pTM=0.303 ipTM=0.191
2024-12-04 18:40:55,890 Relaxation took 205.5s
2024-12-04 18:40:55,890 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50.2 pTM=0.287 ipTM=0.157
2024-12-04 18:42:41,105 Relaxation took 105.2s
2024-12-04 18:42:41,105 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.9 pTM=0.295 ipTM=0.153
2024-12-04 18:42:43,732 Done