2024-12-04 16:34:46,164 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 16:34:47,905 Running on GPU
2024-12-04 16:34:52,482 Found 6 citations for tools or databases
2024-12-04 16:34:52,482 Query 1/1: AHR_TRIM52 (length 1145)
2024-12-04 16:34:53,042 Sleeping for 6s. Reason: PENDING
2024-12-04 16:34:59,295 Sleeping for 7s. Reason: PENDING
2024-12-04 16:35:06,561 Sleeping for 10s. Reason: PENDING
2024-12-04 16:35:16,818 Sleeping for 6s. Reason: PENDING
2024-12-04 16:35:23,074 Sleeping for 8s. Reason: PENDING
2024-12-04 16:35:31,333 Sleeping for 9s. Reason: PENDING
2024-12-04 16:35:40,588 Sleeping for 10s. Reason: PENDING
2024-12-04 16:35:50,851 Sleeping for 7s. Reason: PENDING
2024-12-04 16:35:58,110 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:36:03,372 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:36:08,633 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:36:17,891 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:36:28,151 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:36:33,405 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:36:38,663 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:36:44,924 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:36:53,177 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:36:58,435 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:37:08,692 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:37:16,944 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:37:26,198 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:37:33,459 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:37:41,718 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:37:48,980 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:37:54,248 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:37:59,499 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:38:04,756 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:38:13,009 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:38:22,259 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:38:29,516 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:38:37,767 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:38:48,023 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:38:56,282 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:39:04,539 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:39:09,792 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:39:15,054 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:39:21,312 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:39:28,566 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:39:36,826 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:39:43,083 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:39:50,955 Sleeping for 5s. Reason: PENDING
2024-12-04 16:39:56,217 Sleeping for 8s. Reason: PENDING
2024-12-04 16:40:04,471 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:40:10,726 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:40:19,993 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:40:26,247 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:40:33,500 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:40:40,759 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:40:51,021 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:41:00,284 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:41:10,547 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:41:18,799 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:41:29,060 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:41:35,317 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:41:45,580 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:41:51,839 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:42:03,247 Setting max_seq=508, max_extra_seq=2048
2024-12-04 16:45:19,398 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=38.5 pTM=0.285 ipTM=0.177
2024-12-04 16:45:49,476 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=37.3 pTM=0.317 ipTM=0.372 tol=16.3
2024-12-04 16:46:19,737 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=36.8 pTM=0.273 ipTM=0.198 tol=13.1
2024-12-04 16:46:50,026 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=37.4 pTM=0.277 ipTM=0.19 tol=9.38
2024-12-04 16:47:20,387 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=38.8 pTM=0.306 ipTM=0.361 tol=8.03
2024-12-04 16:47:50,846 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=40.2 pTM=0.308 ipTM=0.379 tol=12.2
2024-12-04 16:48:21,295 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=40.9 pTM=0.312 ipTM=0.385 tol=8.48
2024-12-04 16:48:51,761 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41.1 pTM=0.312 ipTM=0.391 tol=6.11
2024-12-04 16:49:22,266 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=40.7 pTM=0.314 ipTM=0.397 tol=6.82
2024-12-04 16:49:52,784 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=40.9 pTM=0.317 ipTM=0.407 tol=6.16
2024-12-04 16:50:23,312 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=41.2 pTM=0.319 ipTM=0.413 tol=3.2
2024-12-04 16:50:53,907 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=41 pTM=0.321 ipTM=0.42 tol=4.73
2024-12-04 16:51:24,467 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=41.3 pTM=0.322 ipTM=0.424 tol=3.64
2024-12-04 16:51:55,051 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=41 pTM=0.322 ipTM=0.424 tol=2.23
2024-12-04 16:52:25,624 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=41.5 pTM=0.324 ipTM=0.431 tol=7.8
2024-12-04 16:52:56,185 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=41.1 pTM=0.323 ipTM=0.431 tol=3.06
2024-12-04 16:53:26,738 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=41.7 pTM=0.324 ipTM=0.432 tol=4.93
2024-12-04 16:53:57,229 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=41.6 pTM=0.323 ipTM=0.429 tol=5.3
2024-12-04 16:54:27,717 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=41.7 pTM=0.325 ipTM=0.43 tol=6.38
2024-12-04 16:54:58,223 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=41.2 pTM=0.323 ipTM=0.426 tol=6.73
2024-12-04 16:55:28,721 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=41.5 pTM=0.323 ipTM=0.427 tol=6.45
2024-12-04 16:55:59,192 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=41.1 pTM=0.323 ipTM=0.429 tol=6.04
2024-12-04 16:56:29,660 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=41.3 pTM=0.325 ipTM=0.432 tol=2.54
2024-12-04 16:57:00,102 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=41.3 pTM=0.323 ipTM=0.43 tol=7.38
2024-12-04 16:57:30,570 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=41.7 pTM=0.323 ipTM=0.428 tol=4.04
2024-12-04 16:58:01,040 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=41.4 pTM=0.321 ipTM=0.423 tol=5.38
2024-12-04 16:58:31,493 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=41.7 pTM=0.323 ipTM=0.427 tol=3.55
2024-12-04 16:59:01,955 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=41.3 pTM=0.324 ipTM=0.427 tol=4.88
2024-12-04 16:59:32,431 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=41.4 pTM=0.325 ipTM=0.433 tol=4.25
2024-12-04 17:00:02,875 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=41.4 pTM=0.324 ipTM=0.433 tol=2.81
2024-12-04 17:00:33,351 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=40.6 pTM=0.325 ipTM=0.434 tol=10.7
2024-12-04 17:00:33,352 alphafold2_multimer_v3_model_1_seed_000 took 1104.8s (30 recycles)
2024-12-04 17:01:04,466 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=37 pTM=0.277 ipTM=0.185
2024-12-04 17:01:34,892 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=39.2 pTM=0.285 ipTM=0.192 tol=17
2024-12-04 17:02:05,341 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=40.1 pTM=0.292 ipTM=0.186 tol=13.1
2024-12-04 17:02:35,802 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=41.3 pTM=0.298 ipTM=0.193 tol=8.8
2024-12-04 17:03:06,296 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=41.5 pTM=0.298 ipTM=0.188 tol=6.91
2024-12-04 17:03:36,768 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=41.7 pTM=0.299 ipTM=0.18 tol=8.91
2024-12-04 17:04:07,251 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=42.2 pTM=0.304 ipTM=0.196 tol=6.77
2024-12-04 17:04:37,714 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=42.1 pTM=0.309 ipTM=0.213 tol=6.01
2024-12-04 17:05:08,152 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=42 pTM=0.309 ipTM=0.212 tol=4.82
2024-12-04 17:05:38,628 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=42.1 pTM=0.306 ipTM=0.205 tol=4.07
2024-12-04 17:06:09,109 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=42.2 pTM=0.307 ipTM=0.202 tol=3.38
2024-12-04 17:06:39,579 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=42.1 pTM=0.306 ipTM=0.201 tol=3.96
2024-12-04 17:07:10,019 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=42.1 pTM=0.306 ipTM=0.199 tol=2.82
2024-12-04 17:07:40,462 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41.9 pTM=0.304 ipTM=0.195 tol=2.86
2024-12-04 17:08:10,906 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=42 pTM=0.306 ipTM=0.199 tol=2.63
2024-12-04 17:08:41,382 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41.9 pTM=0.306 ipTM=0.196 tol=3.4
2024-12-04 17:09:11,842 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=42.1 pTM=0.306 ipTM=0.196 tol=3.39
2024-12-04 17:09:42,280 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=42.1 pTM=0.305 ipTM=0.195 tol=3.03
2024-12-04 17:10:12,719 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=41.9 pTM=0.306 ipTM=0.194 tol=4.16
2024-12-04 17:10:43,193 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=42 pTM=0.304 ipTM=0.194 tol=3.41
2024-12-04 17:11:13,661 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.9 pTM=0.303 ipTM=0.192 tol=3.3
2024-12-04 17:11:44,110 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=41.9 pTM=0.305 ipTM=0.194 tol=2.8
2024-12-04 17:12:14,533 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=42 pTM=0.305 ipTM=0.196 tol=2.2
2024-12-04 17:12:44,974 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=42 pTM=0.307 ipTM=0.202 tol=4.27
2024-12-04 17:13:15,407 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=42.2 pTM=0.306 ipTM=0.197 tol=3.86
2024-12-04 17:13:45,825 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=41.6 pTM=0.303 ipTM=0.191 tol=6.08
2024-12-04 17:14:16,250 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=41.6 pTM=0.302 ipTM=0.188 tol=5.16
2024-12-04 17:14:46,667 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=42 pTM=0.301 ipTM=0.19 tol=9.38
2024-12-04 17:15:17,107 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=42 pTM=0.302 ipTM=0.188 tol=5.46
2024-12-04 17:15:47,573 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=41.7 pTM=0.304 ipTM=0.189 tol=5.6
2024-12-04 17:16:18,015 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=41.5 pTM=0.304 ipTM=0.192 tol=3.8
2024-12-04 17:16:18,016 alphafold2_multimer_v3_model_2_seed_000 took 943.9s (30 recycles)
2024-12-04 17:16:49,357 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=36.6 pTM=0.283 ipTM=0.182
2024-12-04 17:17:19,831 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=38.7 pTM=0.303 ipTM=0.18 tol=18.3
2024-12-04 17:17:50,332 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=39.6 pTM=0.311 ipTM=0.21 tol=10.8
2024-12-04 17:18:20,833 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=40.8 pTM=0.323 ipTM=0.246 tol=12.6
2024-12-04 17:18:51,350 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=40.4 pTM=0.312 ipTM=0.205 tol=5.76
2024-12-04 17:19:21,870 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=38.1 pTM=0.309 ipTM=0.361 tol=12.5
2024-12-04 17:19:52,431 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=39.3 pTM=0.312 ipTM=0.306 tol=11.9
2024-12-04 17:20:22,972 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=38.8 pTM=0.308 ipTM=0.243 tol=9.84
2024-12-04 17:20:53,530 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=40 pTM=0.313 ipTM=0.21 tol=8.1
2024-12-04 17:21:24,037 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=40.4 pTM=0.316 ipTM=0.212 tol=5.05
2024-12-04 17:21:54,536 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=39.8 pTM=0.315 ipTM=0.373 tol=12.3
2024-12-04 17:22:25,130 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=38.9 pTM=0.308 ipTM=0.203 tol=7.26
2024-12-04 17:22:55,732 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=39.8 pTM=0.315 ipTM=0.207 tol=9.04
2024-12-04 17:23:26,314 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=40.1 pTM=0.314 ipTM=0.211 tol=4.23
2024-12-04 17:23:56,915 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=40 pTM=0.314 ipTM=0.207 tol=3.3
2024-12-04 17:24:27,481 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=40.5 pTM=0.318 ipTM=0.232 tol=3.71
2024-12-04 17:24:58,054 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=40.4 pTM=0.314 ipTM=0.223 tol=4.18
2024-12-04 17:25:28,643 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=39.4 pTM=0.3 ipTM=0.317 tol=12.8
2024-12-04 17:25:59,284 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=39.5 pTM=0.306 ipTM=0.194 tol=7.83
2024-12-04 17:26:29,937 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=39 pTM=0.302 ipTM=0.194 tol=10.5
2024-12-04 17:27:00,563 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=39.2 pTM=0.309 ipTM=0.361 tol=13.1
2024-12-04 17:27:31,203 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=39 pTM=0.302 ipTM=0.208 tol=12
2024-12-04 17:28:01,777 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=39 pTM=0.303 ipTM=0.191 tol=7.99
2024-12-04 17:28:32,339 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=38.5 pTM=0.302 ipTM=0.183 tol=6.86
2024-12-04 17:29:02,932 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=39 pTM=0.312 ipTM=0.375 tol=14.1
2024-12-04 17:29:33,514 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=39.1 pTM=0.307 ipTM=0.191 tol=11.2
2024-12-04 17:30:04,026 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=38.8 pTM=0.304 ipTM=0.193 tol=11.7
2024-12-04 17:30:34,545 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=38.7 pTM=0.314 ipTM=0.36 tol=11.8
2024-12-04 17:31:05,136 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=39.1 pTM=0.301 ipTM=0.191 tol=13.6
2024-12-04 17:31:35,696 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=40 pTM=0.311 ipTM=0.203 tol=8.74
2024-12-04 17:32:06,235 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=38.8 pTM=0.307 ipTM=0.365 tol=13.5
2024-12-04 17:32:06,236 alphafold2_multimer_v3_model_3_seed_000 took 947.4s (30 recycles)
2024-12-04 17:32:37,442 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=35.9 pTM=0.281 ipTM=0.211
2024-12-04 17:33:07,924 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=37.1 pTM=0.278 ipTM=0.195 tol=22.1
2024-12-04 17:33:38,410 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=36.8 pTM=0.288 ipTM=0.23 tol=15.5
2024-12-04 17:34:08,856 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=40.7 pTM=0.34 ipTM=0.426 tol=13.5
2024-12-04 17:34:39,350 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=39.5 pTM=0.326 ipTM=0.411 tol=7.5
2024-12-04 17:35:09,885 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=40.2 pTM=0.339 ipTM=0.414 tol=8.84
2024-12-04 17:35:40,346 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=40.8 pTM=0.342 ipTM=0.422 tol=5.81
2024-12-04 17:36:10,841 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=40.9 pTM=0.345 ipTM=0.418 tol=4.7
2024-12-04 17:36:41,303 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=40.9 pTM=0.349 ipTM=0.427 tol=7.29
2024-12-04 17:37:11,793 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=40.8 pTM=0.349 ipTM=0.424 tol=4.95
2024-12-04 17:37:42,275 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=40.8 pTM=0.337 ipTM=0.422 tol=8.93
2024-12-04 17:38:12,761 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=41.2 pTM=0.344 ipTM=0.427 tol=3.53
2024-12-04 17:38:43,254 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=41 pTM=0.342 ipTM=0.427 tol=3.66
2024-12-04 17:39:13,745 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=40.7 pTM=0.339 ipTM=0.425 tol=5.26
2024-12-04 17:39:44,177 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=41.8 pTM=0.36 ipTM=0.481 tol=10
2024-12-04 17:40:14,613 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=41.2 pTM=0.345 ipTM=0.456 tol=4.21
2024-12-04 17:40:45,061 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=40.9 pTM=0.354 ipTM=0.479 tol=10.4
2024-12-04 17:41:15,536 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=40.9 pTM=0.349 ipTM=0.461 tol=4.47
2024-12-04 17:41:46,034 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=41.4 pTM=0.368 ipTM=0.487 tol=3.8
2024-12-04 17:42:16,528 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=41.2 pTM=0.344 ipTM=0.46 tol=11.8
2024-12-04 17:42:46,993 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=41.9 pTM=0.366 ipTM=0.484 tol=4.82
2024-12-04 17:43:17,441 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=41.6 pTM=0.358 ipTM=0.468 tol=6
2024-12-04 17:43:47,919 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=41.4 pTM=0.353 ipTM=0.475 tol=3.55
2024-12-04 17:44:18,394 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=41.6 pTM=0.361 ipTM=0.464 tol=2.7
2024-12-04 17:44:48,854 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=41.4 pTM=0.365 ipTM=0.483 tol=3.06
2024-12-04 17:45:19,292 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=41.6 pTM=0.368 ipTM=0.474 tol=3.71
2024-12-04 17:45:49,755 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=41.2 pTM=0.359 ipTM=0.469 tol=3.33
2024-12-04 17:46:20,216 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=41.2 pTM=0.361 ipTM=0.467 tol=5.08
2024-12-04 17:46:50,679 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=41.6 pTM=0.371 ipTM=0.479 tol=4.79
2024-12-04 17:47:21,119 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=41.5 pTM=0.354 ipTM=0.465 tol=2.67
2024-12-04 17:47:51,582 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=41.6 pTM=0.352 ipTM=0.473 tol=2.69
2024-12-04 17:47:51,583 alphafold2_multimer_v3_model_4_seed_000 took 944.5s (30 recycles)
2024-12-04 17:48:22,968 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=36.9 pTM=0.269 ipTM=0.182
2024-12-04 17:48:53,587 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=38.6 pTM=0.283 ipTM=0.222 tol=16.9
2024-12-04 17:49:24,183 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=37.7 pTM=0.275 ipTM=0.206 tol=13.6
2024-12-04 17:49:54,744 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=38.2 pTM=0.279 ipTM=0.198 tol=10.3
2024-12-04 17:50:25,326 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=39.2 pTM=0.293 ipTM=0.205 tol=11.1
2024-12-04 17:50:55,925 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=39.7 pTM=0.293 ipTM=0.193 tol=10.8
2024-12-04 17:51:26,506 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=39 pTM=0.292 ipTM=0.178 tol=8.05
2024-12-04 17:51:57,089 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=38.9 pTM=0.293 ipTM=0.185 tol=10.6
2024-12-04 17:52:27,681 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=38.9 pTM=0.296 ipTM=0.179 tol=5.85
2024-12-04 17:52:58,221 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=38.8 pTM=0.293 ipTM=0.176 tol=3.79
2024-12-04 17:53:28,795 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=38.5 pTM=0.3 ipTM=0.248 tol=9.55
2024-12-04 17:53:59,346 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=39 pTM=0.29 ipTM=0.236 tol=6.88
2024-12-04 17:54:29,894 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=40.2 pTM=0.296 ipTM=0.265 tol=8.95
2024-12-04 17:55:00,433 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=40 pTM=0.294 ipTM=0.275 tol=5.43
2024-12-04 17:55:30,959 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=40.1 pTM=0.298 ipTM=0.261 tol=4.65
2024-12-04 17:56:01,478 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=40 pTM=0.296 ipTM=0.277 tol=8.87
2024-12-04 17:56:32,007 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=40.2 pTM=0.291 ipTM=0.282 tol=4.96
2024-12-04 17:57:02,560 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=40.7 pTM=0.291 ipTM=0.287 tol=9.77
2024-12-04 17:57:33,090 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=40.8 pTM=0.302 ipTM=0.286 tol=13
2024-12-04 17:58:03,569 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=40.4 pTM=0.303 ipTM=0.284 tol=10
2024-12-04 17:58:34,019 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=40.2 pTM=0.304 ipTM=0.262 tol=7.58
2024-12-04 17:59:04,503 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=40.1 pTM=0.308 ipTM=0.245 tol=7.14
2024-12-04 17:59:34,985 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=39.9 pTM=0.307 ipTM=0.222 tol=6.36
2024-12-04 18:00:05,511 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=39.4 pTM=0.299 ipTM=0.199 tol=6.68
2024-12-04 18:00:36,076 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=39.4 pTM=0.303 ipTM=0.192 tol=7.59
2024-12-04 18:01:06,657 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=39.1 pTM=0.295 ipTM=0.169 tol=6.12
2024-12-04 18:01:37,285 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=39.2 pTM=0.29 ipTM=0.193 tol=5.79
2024-12-04 18:02:07,930 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=39.9 pTM=0.299 ipTM=0.179 tol=5.29
2024-12-04 18:02:38,542 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=39.1 pTM=0.295 ipTM=0.172 tol=8.86
2024-12-04 18:03:09,163 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=39.2 pTM=0.298 ipTM=0.161 tol=8.52
2024-12-04 18:03:39,822 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=38.9 pTM=0.296 ipTM=0.16 tol=8.35
2024-12-04 18:03:39,823 alphafold2_multimer_v3_model_5_seed_000 took 947.4s (30 recycles)
2024-12-04 18:03:40,626 reranking models by 'multimer' metric
2024-12-04 18:03:45,013 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 18:05:50,900 Relaxation took 130.3s
2024-12-04 18:05:50,900 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=41.6 pTM=0.352 ipTM=0.473
2024-12-04 18:07:34,925 Relaxation took 104.0s
2024-12-04 18:07:34,925 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=40.6 pTM=0.325 ipTM=0.434
2024-12-04 18:10:00,937 Relaxation took 146.0s
2024-12-04 18:10:00,938 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=38.8 pTM=0.307 ipTM=0.365
2024-12-04 18:12:22,533 Relaxation took 141.6s
2024-12-04 18:12:22,533 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=41.5 pTM=0.304 ipTM=0.192
2024-12-04 18:14:45,798 Relaxation took 143.3s
2024-12-04 18:14:45,798 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=38.9 pTM=0.296 ipTM=0.16
2024-12-04 18:14:48,159 Done