2024-12-04 16:34:46,164 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 16:34:47,905 Running on GPU
2024-12-04 16:34:52,482 Found 6 citations for tools or databases
2024-12-04 16:34:52,482 Query 1/1: AIRE_GM2A (length 738)
2024-12-04 16:34:52,838 Sleeping for 6s. Reason: PENDING
2024-12-04 16:34:59,096 Sleeping for 6s. Reason: PENDING
2024-12-04 16:35:05,352 Sleeping for 5s. Reason: PENDING
2024-12-04 16:35:10,604 Sleeping for 8s. Reason: PENDING
2024-12-04 16:35:18,858 Sleeping for 7s. Reason: PENDING
2024-12-04 16:35:26,116 Sleeping for 6s. Reason: PENDING
2024-12-04 16:35:32,377 Sleeping for 10s. Reason: PENDING
2024-12-04 16:35:42,630 Sleeping for 8s. Reason: PENDING
2024-12-04 16:35:50,885 Sleeping for 7s. Reason: PENDING
2024-12-04 16:35:58,139 Sleeping for 7s. Reason: PENDING
2024-12-04 16:36:05,392 Sleeping for 5s. Reason: PENDING
2024-12-04 16:36:10,647 Sleeping for 8s. Reason: PENDING
2024-12-04 16:36:18,909 Sleeping for 6s. Reason: PENDING
2024-12-04 16:36:25,164 Sleeping for 7s. Reason: PENDING
2024-12-04 16:36:32,424 Sleeping for 8s. Reason: PENDING
2024-12-04 16:36:40,694 Sleeping for 8s. Reason: PENDING
2024-12-04 16:36:48,949 Sleeping for 10s. Reason: PENDING
2024-12-04 16:36:59,207 Sleeping for 9s. Reason: PENDING
2024-12-04 16:37:08,462 Sleeping for 9s. Reason: PENDING
2024-12-04 16:37:17,722 Sleeping for 7s. Reason: PENDING
2024-12-04 16:37:24,980 Sleeping for 10s. Reason: PENDING
2024-12-04 16:37:35,238 Sleeping for 7s. Reason: PENDING
2024-12-04 16:37:42,500 Sleeping for 6s. Reason: PENDING
2024-12-04 16:37:48,755 Sleeping for 5s. Reason: PENDING
2024-12-04 16:37:54,014 Sleeping for 9s. Reason: PENDING
2024-12-04 16:38:03,272 Sleeping for 6s. Reason: PENDING
2024-12-04 16:38:09,523 Sleeping for 10s. Reason: PENDING
2024-12-04 16:38:19,790 Sleeping for 5s. Reason: PENDING
2024-12-04 16:38:25,045 Sleeping for 7s. Reason: PENDING
2024-12-04 16:38:32,301 Sleeping for 5s. Reason: PENDING
2024-12-04 16:38:37,555 Sleeping for 9s. Reason: PENDING
2024-12-04 16:38:46,813 Sleeping for 5s. Reason: PENDING
2024-12-04 16:38:52,067 Sleeping for 10s. Reason: PENDING
2024-12-04 16:39:02,327 Sleeping for 7s. Reason: PENDING
2024-12-04 16:39:09,583 Sleeping for 6s. Reason: PENDING
2024-12-04 16:39:15,844 Sleeping for 8s. Reason: PENDING
2024-12-04 16:39:24,107 Sleeping for 5s. Reason: PENDING
2024-12-04 16:39:29,365 Sleeping for 8s. Reason: PENDING
2024-12-04 16:39:37,626 Sleeping for 10s. Reason: PENDING
2024-12-04 16:39:47,895 Sleeping for 7s. Reason: PENDING
2024-12-04 16:39:55,155 Sleeping for 9s. Reason: PENDING
2024-12-04 16:40:04,419 Sleeping for 10s. Reason: PENDING
2024-12-04 16:40:14,680 Sleeping for 6s. Reason: PENDING
2024-12-04 16:40:20,937 Sleeping for 9s. Reason: PENDING
2024-12-04 16:40:30,191 Sleeping for 9s. Reason: PENDING
2024-12-04 16:40:39,452 Sleeping for 5s. Reason: PENDING
2024-12-04 16:40:44,709 Sleeping for 5s. Reason: PENDING
2024-12-04 16:40:49,966 Sleeping for 6s. Reason: PENDING
2024-12-04 16:40:56,222 Sleeping for 6s. Reason: PENDING
2024-12-04 16:41:02,480 Sleeping for 7s. Reason: PENDING
2024-12-04 16:41:09,734 Sleeping for 6s. Reason: PENDING
2024-12-04 16:41:15,996 Sleeping for 8s. Reason: PENDING
2024-12-04 16:41:24,251 Sleeping for 9s. Reason: PENDING
2024-12-04 16:41:33,509 Sleeping for 9s. Reason: PENDING
2024-12-04 16:41:42,769 Sleeping for 7s. Reason: PENDING
2024-12-04 16:41:50,028 Sleeping for 6s. Reason: PENDING
2024-12-04 16:41:56,291 Sleeping for 9s. Reason: PENDING
2024-12-04 16:42:05,550 Sleeping for 9s. Reason: PENDING
2024-12-04 16:42:14,805 Sleeping for 6s. Reason: PENDING
2024-12-04 16:42:21,057 Sleeping for 10s. Reason: PENDING
2024-12-04 16:42:31,317 Sleeping for 6s. Reason: PENDING
2024-12-04 16:42:37,574 Sleeping for 7s. Reason: PENDING
2024-12-04 16:42:44,823 Sleeping for 5s. Reason: PENDING
2024-12-04 16:42:50,082 Sleeping for 6s. Reason: PENDING
2024-12-04 16:42:56,345 Sleeping for 7s. Reason: PENDING
2024-12-04 16:43:03,599 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:43:10,853 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:43:19,113 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:43:29,371 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:43:34,625 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:43:44,882 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:43:54,143 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:44:00,394 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:44:06,653 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:44:11,906 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:44:22,167 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:44:28,421 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:44:34,853 Sleeping for 8s. Reason: PENDING
2024-12-04 16:44:43,113 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:44:50,370 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:45:00,628 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:45:07,880 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:45:14,139 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:45:22,400 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:45:29,802 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:45:40,424 Setting max_seq=508, max_extra_seq=2048
2024-12-04 16:48:14,059 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=48 pTM=0.359 ipTM=0.317
2024-12-04 16:48:25,170 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.2 pTM=0.337 ipTM=0.273 tol=19.9
2024-12-04 16:48:36,287 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.4 pTM=0.367 ipTM=0.518 tol=12.3
2024-12-04 16:48:47,431 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51.9 pTM=0.384 ipTM=0.652 tol=4.79
2024-12-04 16:48:58,582 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=52.3 pTM=0.382 ipTM=0.661 tol=2.86
2024-12-04 16:49:09,757 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=52.6 pTM=0.385 ipTM=0.674 tol=2.25
2024-12-04 16:49:20,929 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.6 pTM=0.383 ipTM=0.677 tol=5.66
2024-12-04 16:49:32,120 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.9 pTM=0.388 ipTM=0.683 tol=4.54
2024-12-04 16:49:43,306 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.8 pTM=0.389 ipTM=0.674 tol=2.51
2024-12-04 16:49:54,505 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.9 pTM=0.389 ipTM=0.682 tol=1.71
2024-12-04 16:50:05,723 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53 pTM=0.389 ipTM=0.682 tol=1.72
2024-12-04 16:50:16,946 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.8 pTM=0.389 ipTM=0.68 tol=2.01
2024-12-04 16:50:28,177 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.8 pTM=0.387 ipTM=0.681 tol=4.53
2024-12-04 16:50:39,405 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.7 pTM=0.388 ipTM=0.687 tol=6.01
2024-12-04 16:50:50,644 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.9 pTM=0.388 ipTM=0.685 tol=2.61
2024-12-04 16:51:01,883 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.8 pTM=0.387 ipTM=0.686 tol=2.37
2024-12-04 16:51:13,125 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.8 pTM=0.388 ipTM=0.692 tol=1.64
2024-12-04 16:51:24,370 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.9 pTM=0.388 ipTM=0.689 tol=4.12
2024-12-04 16:51:35,609 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=53.1 pTM=0.387 ipTM=0.692 tol=4.77
2024-12-04 16:51:46,848 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.9 pTM=0.388 ipTM=0.692 tol=4.35
2024-12-04 16:51:58,091 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.7 pTM=0.386 ipTM=0.69 tol=1.24
2024-12-04 16:52:09,334 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.7 pTM=0.386 ipTM=0.69 tol=1.61
2024-12-04 16:52:20,579 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=53 pTM=0.388 ipTM=0.684 tol=1.5
2024-12-04 16:52:31,825 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.9 pTM=0.388 ipTM=0.687 tol=4.15
2024-12-04 16:52:43,072 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=53.1 pTM=0.39 ipTM=0.691 tol=3.8
2024-12-04 16:52:54,322 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.9 pTM=0.388 ipTM=0.692 tol=1.26
2024-12-04 16:53:05,567 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53 pTM=0.386 ipTM=0.689 tol=2.99
2024-12-04 16:53:16,813 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.7 pTM=0.386 ipTM=0.692 tol=4.23
2024-12-04 16:53:28,060 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.8 pTM=0.384 ipTM=0.692 tol=4.73
2024-12-04 16:53:39,298 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.6 pTM=0.387 ipTM=0.691 tol=1.12
2024-12-04 16:53:50,534 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.7 pTM=0.386 ipTM=0.687 tol=1.26
2024-12-04 16:53:50,534 alphafold2_multimer_v3_model_1_seed_000 took 486.4s (30 recycles)
2024-12-04 16:54:02,111 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.6 pTM=0.367 ipTM=0.428
2024-12-04 16:54:13,374 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.4 pTM=0.317 ipTM=0.237 tol=26.2
2024-12-04 16:54:24,620 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50.9 pTM=0.349 ipTM=0.333 tol=12.1
2024-12-04 16:54:35,874 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52.8 pTM=0.389 ipTM=0.706 tol=5.25
2024-12-04 16:54:47,122 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.5 pTM=0.388 ipTM=0.667 tol=5.72
2024-12-04 16:54:58,370 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.6 pTM=0.388 ipTM=0.664 tol=3.5
2024-12-04 16:55:09,615 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.1 pTM=0.395 ipTM=0.694 tol=2.96
2024-12-04 16:55:20,858 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54 pTM=0.396 ipTM=0.688 tol=2.28
2024-12-04 16:55:32,098 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.1 pTM=0.398 ipTM=0.695 tol=1.19
2024-12-04 16:55:43,340 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.1 pTM=0.396 ipTM=0.688 tol=1.23
2024-12-04 16:55:54,581 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.2 pTM=0.398 ipTM=0.698 tol=1.06
2024-12-04 16:56:05,829 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.7 pTM=0.395 ipTM=0.695 tol=1.11
2024-12-04 16:56:17,067 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54 pTM=0.396 ipTM=0.692 tol=1.24
2024-12-04 16:56:28,319 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.8 pTM=0.396 ipTM=0.688 tol=2.06
2024-12-04 16:56:39,558 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.9 pTM=0.395 ipTM=0.688 tol=1.16
2024-12-04 16:56:50,796 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.9 pTM=0.396 ipTM=0.689 tol=1.64
2024-12-04 16:57:02,029 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.8 pTM=0.395 ipTM=0.692 tol=2.07
2024-12-04 16:57:13,273 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.1 pTM=0.398 ipTM=0.691 tol=2.15
2024-12-04 16:57:24,519 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.1 pTM=0.398 ipTM=0.693 tol=2.75
2024-12-04 16:57:35,765 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.9 pTM=0.396 ipTM=0.694 tol=2.6
2024-12-04 16:57:47,008 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.1 pTM=0.398 ipTM=0.692 tol=5.32
2024-12-04 16:57:58,246 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54 pTM=0.397 ipTM=0.686 tol=4.26
2024-12-04 16:58:09,489 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54 pTM=0.396 ipTM=0.681 tol=1.94
2024-12-04 16:58:20,731 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.8 pTM=0.396 ipTM=0.683 tol=1.04
2024-12-04 16:58:31,968 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54 pTM=0.398 ipTM=0.686 tol=1.22
2024-12-04 16:58:43,194 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53.9 pTM=0.395 ipTM=0.684 tol=0.863
2024-12-04 16:58:54,437 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.9 pTM=0.396 ipTM=0.69 tol=1.76
2024-12-04 16:59:05,680 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.9 pTM=0.396 ipTM=0.69 tol=1.67
2024-12-04 16:59:16,926 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.1 pTM=0.397 ipTM=0.693 tol=1.01
2024-12-04 16:59:28,165 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.8 pTM=0.396 ipTM=0.691 tol=2.51
2024-12-04 16:59:39,400 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.7 pTM=0.397 ipTM=0.69 tol=2.16
2024-12-04 16:59:39,401 alphafold2_multimer_v3_model_2_seed_000 took 348.5s (30 recycles)
2024-12-04 16:59:50,972 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.7 pTM=0.351 ipTM=0.34
2024-12-04 17:00:02,243 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.3 pTM=0.309 ipTM=0.337 tol=16.3
2024-12-04 17:00:13,517 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.7 pTM=0.313 ipTM=0.3 tol=10.4
2024-12-04 17:00:24,774 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.8 pTM=0.32 ipTM=0.352 tol=6.02
2024-12-04 17:00:36,028 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48 pTM=0.321 ipTM=0.331 tol=5.79
2024-12-04 17:00:47,288 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.3 pTM=0.32 ipTM=0.345 tol=7.33
2024-12-04 17:00:58,547 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.1 pTM=0.32 ipTM=0.354 tol=4.78
2024-12-04 17:01:09,813 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.4 pTM=0.32 ipTM=0.353 tol=4.98
2024-12-04 17:01:21,070 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.1 pTM=0.318 ipTM=0.341 tol=5.16
2024-12-04 17:01:32,326 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.4 pTM=0.319 ipTM=0.355 tol=4.18
2024-12-04 17:01:43,586 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.1 pTM=0.317 ipTM=0.343 tol=4.53
2024-12-04 17:01:54,851 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=48.1 pTM=0.318 ipTM=0.338 tol=3.91
2024-12-04 17:02:06,117 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.3 pTM=0.317 ipTM=0.371 tol=5.57
2024-12-04 17:02:17,387 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48.2 pTM=0.318 ipTM=0.343 tol=5.73
2024-12-04 17:02:28,640 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48.4 pTM=0.319 ipTM=0.399 tol=5.93
2024-12-04 17:02:39,897 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48.1 pTM=0.317 ipTM=0.339 tol=5.98
2024-12-04 17:02:51,156 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.2 pTM=0.316 ipTM=0.388 tol=7.29
2024-12-04 17:03:02,427 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48.1 pTM=0.318 ipTM=0.356 tol=5.37
2024-12-04 17:03:13,680 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48.3 pTM=0.317 ipTM=0.381 tol=3.04
2024-12-04 17:03:24,952 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=48.4 pTM=0.319 ipTM=0.379 tol=5.29
2024-12-04 17:03:36,206 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.1 pTM=0.316 ipTM=0.358 tol=7.18
2024-12-04 17:03:47,458 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=48.3 pTM=0.319 ipTM=0.395 tol=6.46
2024-12-04 17:03:58,712 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.3 pTM=0.319 ipTM=0.356 tol=3.32
2024-12-04 17:04:09,960 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.3 pTM=0.32 ipTM=0.384 tol=2.42
2024-12-04 17:04:21,209 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.2 pTM=0.319 ipTM=0.344 tol=4.12
2024-12-04 17:04:32,450 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=48.5 pTM=0.319 ipTM=0.4 tol=4.01
2024-12-04 17:04:43,707 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=48.3 pTM=0.317 ipTM=0.36 tol=3.75
2024-12-04 17:04:54,951 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=48.3 pTM=0.318 ipTM=0.386 tol=4.91
2024-12-04 17:05:06,203 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48.3 pTM=0.317 ipTM=0.362 tol=5.1
2024-12-04 17:05:17,444 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=48.3 pTM=0.317 ipTM=0.399 tol=3.32
2024-12-04 17:05:28,688 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48.3 pTM=0.318 ipTM=0.344 tol=3.21
2024-12-04 17:05:28,688 alphafold2_multimer_v3_model_3_seed_000 took 348.9s (30 recycles)
2024-12-04 17:05:40,249 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45 pTM=0.348 ipTM=0.34
2024-12-04 17:05:51,481 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.2 pTM=0.323 ipTM=0.346 tol=22.8
2024-12-04 17:06:02,714 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.4 pTM=0.325 ipTM=0.315 tol=10.4
2024-12-04 17:06:13,944 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.1 pTM=0.329 ipTM=0.341 tol=7.06
2024-12-04 17:06:25,180 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.2 pTM=0.323 ipTM=0.315 tol=4.85
2024-12-04 17:06:36,410 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.7 pTM=0.332 ipTM=0.434 tol=3.14
2024-12-04 17:06:47,647 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.7 pTM=0.329 ipTM=0.308 tol=3.42
2024-12-04 17:06:58,884 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.7 pTM=0.326 ipTM=0.35 tol=3.92
2024-12-04 17:07:10,120 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.2 pTM=0.326 ipTM=0.297 tol=6.07
2024-12-04 17:07:21,372 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.7 pTM=0.326 ipTM=0.317 tol=11.5
2024-12-04 17:07:32,630 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.1 pTM=0.328 ipTM=0.335 tol=7.99
2024-12-04 17:07:43,893 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.3 pTM=0.326 ipTM=0.385 tol=3.5
2024-12-04 17:07:55,166 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.3 pTM=0.326 ipTM=0.32 tol=4.15
2024-12-04 17:08:06,429 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.2 pTM=0.329 ipTM=0.364 tol=2.51
2024-12-04 17:08:17,686 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48 pTM=0.328 ipTM=0.324 tol=2.49
2024-12-04 17:08:28,952 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.4 pTM=0.328 ipTM=0.402 tol=4.27
2024-12-04 17:08:40,213 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.5 pTM=0.329 ipTM=0.328 tol=3
2024-12-04 17:08:51,480 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.3 pTM=0.329 ipTM=0.385 tol=3.53
2024-12-04 17:09:02,736 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.7 pTM=0.33 ipTM=0.323 tol=5.55
2024-12-04 17:09:14,004 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.8 pTM=0.329 ipTM=0.395 tol=4.97
2024-12-04 17:09:25,268 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.5 pTM=0.327 ipTM=0.303 tol=1.99
2024-12-04 17:09:36,530 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.5 pTM=0.328 ipTM=0.358 tol=4.93
2024-12-04 17:09:47,790 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.5 pTM=0.329 ipTM=0.31 tol=3.11
2024-12-04 17:09:59,047 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.5 pTM=0.329 ipTM=0.347 tol=5.56
2024-12-04 17:10:10,305 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.4 pTM=0.329 ipTM=0.351 tol=5.58
2024-12-04 17:10:21,573 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.9 pTM=0.327 ipTM=0.387 tol=3.82
2024-12-04 17:10:32,828 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.7 pTM=0.329 ipTM=0.343 tol=4.79
2024-12-04 17:10:44,095 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.8 pTM=0.331 ipTM=0.415 tol=4.99
2024-12-04 17:10:55,348 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.8 pTM=0.329 ipTM=0.314 tol=4.7
2024-12-04 17:11:06,603 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.1 pTM=0.329 ipTM=0.347 tol=4.31
2024-12-04 17:11:17,862 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.8 pTM=0.33 ipTM=0.307 tol=3.62
2024-12-04 17:11:17,863 alphafold2_multimer_v3_model_4_seed_000 took 348.8s (30 recycles)
2024-12-04 17:11:29,440 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.8 pTM=0.381 ipTM=0.611
2024-12-04 17:11:40,713 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.2 pTM=0.375 ipTM=0.681 tol=17.8
2024-12-04 17:11:51,993 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.2 pTM=0.389 ipTM=0.745 tol=16.7
2024-12-04 17:12:03,256 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.2 pTM=0.387 ipTM=0.736 tol=7.09
2024-12-04 17:12:14,520 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.8 pTM=0.39 ipTM=0.74 tol=14.7
2024-12-04 17:12:25,787 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.7 pTM=0.389 ipTM=0.724 tol=8.64
2024-12-04 17:12:37,047 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.9 pTM=0.39 ipTM=0.737 tol=6.55
2024-12-04 17:12:48,312 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.6 pTM=0.387 ipTM=0.73 tol=8.73
2024-12-04 17:12:59,577 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.8 pTM=0.391 ipTM=0.733 tol=16
2024-12-04 17:13:10,839 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.4 pTM=0.388 ipTM=0.718 tol=8.01
2024-12-04 17:13:22,110 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53 pTM=0.391 ipTM=0.726 tol=11.2
2024-12-04 17:13:33,376 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.5 pTM=0.39 ipTM=0.731 tol=10.3
2024-12-04 17:13:44,647 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.1 pTM=0.39 ipTM=0.731 tol=13.9
2024-12-04 17:13:55,925 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.7 pTM=0.389 ipTM=0.728 tol=13.3
2024-12-04 17:14:07,201 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.9 pTM=0.388 ipTM=0.72 tol=10
2024-12-04 17:14:18,472 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.6 pTM=0.389 ipTM=0.729 tol=9.7
2024-12-04 17:14:29,735 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.3 pTM=0.392 ipTM=0.733 tol=10
2024-12-04 17:14:41,005 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.7 pTM=0.391 ipTM=0.729 tol=6.69
2024-12-04 17:14:52,268 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53 pTM=0.39 ipTM=0.733 tol=11.5
2024-12-04 17:15:03,537 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.9 pTM=0.392 ipTM=0.731 tol=8.84
2024-12-04 17:15:14,802 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53 pTM=0.388 ipTM=0.734 tol=13.5
2024-12-04 17:15:26,071 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.9 pTM=0.391 ipTM=0.731 tol=8.29
2024-12-04 17:15:37,340 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.7 pTM=0.387 ipTM=0.717 tol=3.87
2024-12-04 17:15:48,606 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.7 pTM=0.39 ipTM=0.727 tol=4.45
2024-12-04 17:15:59,880 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.1 pTM=0.391 ipTM=0.725 tol=5.27
2024-12-04 17:16:11,152 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.9 pTM=0.39 ipTM=0.726 tol=4.65
2024-12-04 17:16:22,421 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52.9 pTM=0.388 ipTM=0.734 tol=6.79
2024-12-04 17:16:33,690 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.9 pTM=0.391 ipTM=0.733 tol=5.84
2024-12-04 17:16:44,956 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53 pTM=0.387 ipTM=0.729 tol=5.85
2024-12-04 17:16:56,228 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.9 pTM=0.391 ipTM=0.733 tol=3.98
2024-12-04 17:17:07,496 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.2 pTM=0.39 ipTM=0.732 tol=7.08
2024-12-04 17:17:07,497 alphafold2_multimer_v3_model_5_seed_000 took 349.3s (30 recycles)
2024-12-04 17:17:07,839 reranking models by 'multimer' metric
2024-12-04 17:17:11,255 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 17:18:00,841 Relaxation took 53.0s
2024-12-04 17:18:00,841 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.2 pTM=0.39 ipTM=0.732
2024-12-04 17:18:41,734 Relaxation took 40.9s
2024-12-04 17:18:41,734 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.7 pTM=0.397 ipTM=0.69
2024-12-04 17:19:20,773 Relaxation took 39.0s
2024-12-04 17:19:20,773 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.7 pTM=0.386 ipTM=0.687
2024-12-04 17:20:06,091 Relaxation took 45.3s
2024-12-04 17:20:06,091 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48.3 pTM=0.318 ipTM=0.344
2024-12-04 17:20:54,621 Relaxation took 48.5s
2024-12-04 17:20:54,621 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.8 pTM=0.33 ipTM=0.307
2024-12-04 17:20:55,922 Done