2024-12-04 16:34:46,164 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 16:34:47,906 Running on GPU
2024-12-04 16:34:52,483 Found 6 citations for tools or databases
2024-12-04 16:34:52,483 Query 1/1: AMBRA1_FEM1A (length 1967)
2024-12-04 16:34:53,037 Sleeping for 5s. Reason: PENDING
2024-12-04 16:34:58,299 Sleeping for 5s. Reason: PENDING
2024-12-04 16:35:03,559 Sleeping for 5s. Reason: PENDING
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2024-12-04 16:35:56,354 Sleeping for 6s. Reason: PENDING
2024-12-04 16:36:02,616 Sleeping for 5s. Reason: PENDING
2024-12-04 16:36:07,870 Sleeping for 9s. Reason: PENDING
2024-12-04 16:36:17,127 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:36:24,387 Sleeping for 9s. Reason: RUNNING
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2024-12-04 16:36:40,911 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:36:48,167 Sleeping for 10s. Reason: RUNNING
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2024-12-04 16:37:06,694 Sleeping for 7s. Reason: RUNNING
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2024-12-04 16:37:49,988 Sleeping for 7s. Reason: RUNNING
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2024-12-04 16:38:03,503 Sleeping for 7s. Reason: RUNNING
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2024-12-04 16:38:39,540 Sleeping for 5s. Reason: RUNNING
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2024-12-04 16:38:52,053 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:39:00,312 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:39:09,573 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:39:17,825 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:39:27,079 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:39:34,332 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:39:40,585 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:39:45,846 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:39:55,108 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:40:03,364 Sleeping for 8s. Reason: RUNNING
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2024-12-04 16:40:17,872 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:40:24,134 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:40:36,012 Sleeping for 6s. Reason: PENDING
2024-12-04 16:40:42,270 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:40:51,527 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:41:01,795 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:41:09,053 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:41:16,309 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:41:24,566 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:41:33,822 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:41:43,080 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:41:49,335 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:41:59,597 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:42:04,858 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:42:12,113 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:42:21,369 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:42:26,649 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:42:31,908 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:42:41,174 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:42:50,455 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:42:55,709 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:43:01,963 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:43:09,222 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:43:15,483 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:43:31,936 Setting max_seq=508, max_extra_seq=2048
2024-12-04 16:48:53,623 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.3 pTM=0.416 ipTM=0.248
2024-12-04 16:51:26,702 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=52.4 pTM=0.419 ipTM=0.269 tol=11.8
2024-12-04 16:53:59,781 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=52.2 pTM=0.421 ipTM=0.307 tol=7.92
2024-12-04 16:56:32,915 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.3 pTM=0.42 ipTM=0.338 tol=5.98
2024-12-04 16:59:05,948 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=52.3 pTM=0.422 ipTM=0.296 tol=6.16
2024-12-04 17:01:38,997 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=52.2 pTM=0.421 ipTM=0.344 tol=5.43
2024-12-04 17:04:12,065 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.4 pTM=0.42 ipTM=0.364 tol=4.72
2024-12-04 17:06:45,211 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.5 pTM=0.422 ipTM=0.425 tol=5.59
2024-12-04 17:09:18,361 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.3 pTM=0.42 ipTM=0.426 tol=6.34
2024-12-04 17:11:51,473 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.5 pTM=0.421 ipTM=0.455 tol=5.3
2024-12-04 17:14:24,560 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.6 pTM=0.421 ipTM=0.459 tol=5.31
2024-12-04 17:16:57,631 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.7 pTM=0.423 ipTM=0.479 tol=5.29
2024-12-04 17:19:30,744 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.6 pTM=0.421 ipTM=0.466 tol=4.8
2024-12-04 17:22:03,862 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.8 pTM=0.421 ipTM=0.465 tol=4.02
2024-12-04 17:24:36,958 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.7 pTM=0.419 ipTM=0.462 tol=3.97
2024-12-04 17:27:10,053 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.6 pTM=0.42 ipTM=0.465 tol=3.81
2024-12-04 17:29:43,161 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.7 pTM=0.421 ipTM=0.462 tol=3.39
2024-12-04 17:32:16,262 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.6 pTM=0.421 ipTM=0.471 tol=3.73
2024-12-04 17:34:49,343 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.7 pTM=0.421 ipTM=0.452 tol=4.08
2024-12-04 17:37:22,437 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.8 pTM=0.423 ipTM=0.455 tol=3.55
2024-12-04 17:39:55,533 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.8 pTM=0.422 ipTM=0.468 tol=3.18
2024-12-04 17:42:28,605 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.7 pTM=0.422 ipTM=0.452 tol=3.1
2024-12-04 17:45:01,672 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.6 pTM=0.421 ipTM=0.441 tol=3.47
2024-12-04 17:47:34,726 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.6 pTM=0.421 ipTM=0.446 tol=3.3
2024-12-04 17:50:07,761 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.7 pTM=0.423 ipTM=0.46 tol=2.82
2024-12-04 17:52:40,785 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.7 pTM=0.422 ipTM=0.456 tol=2.78
2024-12-04 17:55:13,823 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.8 pTM=0.424 ipTM=0.464 tol=2.46
2024-12-04 17:57:46,817 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.6 pTM=0.423 ipTM=0.458 tol=3.06
2024-12-04 18:00:19,794 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.6 pTM=0.421 ipTM=0.466 tol=3.06
2024-12-04 18:02:52,779 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.5 pTM=0.423 ipTM=0.467 tol=2.29
2024-12-04 18:05:25,815 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.6 pTM=0.425 ipTM=0.471 tol=2.94
2024-12-04 18:05:25,818 alphafold2_multimer_v3_model_1_seed_000 took 4910.3s (30 recycles)
2024-12-04 18:08:01,041 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.8 pTM=0.428 ipTM=0.275
2024-12-04 18:10:34,176 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.4 pTM=0.425 ipTM=0.328 tol=14.7
2024-12-04 18:13:07,440 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.5 pTM=0.422 ipTM=0.343 tol=9.35
2024-12-04 18:15:40,712 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52.8 pTM=0.421 ipTM=0.393 tol=7.12
2024-12-04 18:18:13,871 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.8 pTM=0.422 ipTM=0.253 tol=9.32
2024-12-04 18:20:47,047 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.8 pTM=0.421 ipTM=0.242 tol=6.38
2024-12-04 18:23:20,195 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.8 pTM=0.423 ipTM=0.238 tol=13
2024-12-04 18:25:53,403 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.8 pTM=0.424 ipTM=0.236 tol=6.01
2024-12-04 18:28:26,611 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.7 pTM=0.423 ipTM=0.229 tol=4.69
2024-12-04 18:30:59,819 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52.8 pTM=0.424 ipTM=0.288 tol=4.52
2024-12-04 18:33:33,100 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53 pTM=0.423 ipTM=0.262 tol=5.78
2024-12-04 18:36:06,390 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53 pTM=0.424 ipTM=0.233 tol=5.36
2024-12-04 18:38:39,641 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52.8 pTM=0.423 ipTM=0.252 tol=4.84
2024-12-04 18:41:12,855 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.8 pTM=0.424 ipTM=0.286 tol=4.43
2024-12-04 18:43:46,081 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.8 pTM=0.422 ipTM=0.239 tol=6.39
2024-12-04 18:46:19,367 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52.8 pTM=0.423 ipTM=0.259 tol=5.22
2024-12-04 18:48:52,684 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52.9 pTM=0.424 ipTM=0.282 tol=6.44
2024-12-04 18:51:25,996 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.8 pTM=0.422 ipTM=0.245 tol=4.86
2024-12-04 18:53:59,277 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.9 pTM=0.424 ipTM=0.273 tol=4.33
2024-12-04 18:56:32,566 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.9 pTM=0.424 ipTM=0.272 tol=3.99
2024-12-04 18:59:05,841 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.9 pTM=0.422 ipTM=0.234 tol=3.86
2024-12-04 19:01:39,164 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53 pTM=0.424 ipTM=0.29 tol=3.8
2024-12-04 19:04:12,519 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.9 pTM=0.423 ipTM=0.272 tol=4.47
2024-12-04 19:06:45,875 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.8 pTM=0.42 ipTM=0.231 tol=4.79
2024-12-04 19:09:19,231 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52.8 pTM=0.421 ipTM=0.228 tol=5.36
2024-12-04 19:11:52,550 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.8 pTM=0.422 ipTM=0.324 tol=6.46
2024-12-04 19:14:25,930 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.9 pTM=0.421 ipTM=0.26 tol=5.47
2024-12-04 19:16:59,292 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.8 pTM=0.42 ipTM=0.226 tol=3.52
2024-12-04 19:19:32,659 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.8 pTM=0.422 ipTM=0.297 tol=3.49
2024-12-04 19:22:05,983 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.7 pTM=0.422 ipTM=0.245 tol=3.23
2024-12-04 19:24:39,339 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.7 pTM=0.421 ipTM=0.227 tol=4.32
2024-12-04 19:24:39,341 alphafold2_multimer_v3_model_2_seed_000 took 4751.3s (30 recycles)
2024-12-04 19:27:14,936 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51.5 pTM=0.422 ipTM=0.206
2024-12-04 19:29:48,384 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.6 pTM=0.407 ipTM=0.226 tol=30.6
2024-12-04 19:32:21,837 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.9 pTM=0.404 ipTM=0.228 tol=19.8
2024-12-04 19:34:55,495 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.2 pTM=0.406 ipTM=0.298 tol=15.4
2024-12-04 19:37:28,870 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.2 pTM=0.425 ipTM=0.345 tol=21.8
2024-12-04 19:40:02,362 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.5 pTM=0.421 ipTM=0.375 tol=14.9
2024-12-04 19:42:35,990 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.7 pTM=0.412 ipTM=0.303 tol=14.9
2024-12-04 19:45:09,614 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.8 pTM=0.413 ipTM=0.276 tol=11.3
2024-12-04 19:47:43,039 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.7 pTM=0.416 ipTM=0.256 tol=8.78
2024-12-04 19:50:16,530 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.8 pTM=0.409 ipTM=0.304 tol=13.2
2024-12-04 19:52:49,996 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.9 pTM=0.41 ipTM=0.349 tol=8.41
2024-12-04 19:55:23,532 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.9 pTM=0.415 ipTM=0.396 tol=9.27
2024-12-04 19:57:57,108 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53 pTM=0.414 ipTM=0.39 tol=7.14
2024-12-04 20:00:30,591 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.1 pTM=0.413 ipTM=0.405 tol=6.21
2024-12-04 20:03:04,079 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.1 pTM=0.41 ipTM=0.406 tol=5.69
2024-12-04 20:05:37,579 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53 pTM=0.41 ipTM=0.386 tol=5.27
2024-12-04 20:08:11,116 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53 pTM=0.41 ipTM=0.388 tol=3.89
2024-12-04 20:10:44,653 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=52.8 pTM=0.41 ipTM=0.401 tol=3.71
2024-12-04 20:13:18,197 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.9 pTM=0.409 ipTM=0.384 tol=3.91
2024-12-04 20:15:51,813 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.2 pTM=0.413 ipTM=0.386 tol=7.02
2024-12-04 20:18:25,297 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.1 pTM=0.415 ipTM=0.39 tol=6.03
2024-12-04 20:20:58,788 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53 pTM=0.411 ipTM=0.399 tol=4.39
2024-12-04 20:23:32,300 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53 pTM=0.409 ipTM=0.378 tol=5.87
2024-12-04 20:26:05,855 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.8 pTM=0.409 ipTM=0.368 tol=6.76
2024-12-04 20:28:39,411 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.7 pTM=0.409 ipTM=0.379 tol=4.46
2024-12-04 20:31:12,891 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.7 pTM=0.408 ipTM=0.37 tol=4.27
2024-12-04 20:33:46,383 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.7 pTM=0.408 ipTM=0.381 tol=5.04
2024-12-04 20:36:19,842 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.6 pTM=0.407 ipTM=0.37 tol=6.04
2024-12-04 20:38:53,304 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52.7 pTM=0.408 ipTM=0.38 tol=6.49
2024-12-04 20:41:26,873 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.7 pTM=0.408 ipTM=0.4 tol=4.32
2024-12-04 20:44:00,486 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.9 pTM=0.412 ipTM=0.404 tol=4.62
2024-12-04 20:44:00,488 alphafold2_multimer_v3_model_3_seed_000 took 4758.9s (30 recycles)
2024-12-04 20:46:35,812 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.9 pTM=0.546 ipTM=0.645
2024-12-04 20:49:08,833 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.7 pTM=0.548 ipTM=0.672 tol=15.1
2024-12-04 20:51:42,073 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.3 pTM=0.524 ipTM=0.58 tol=7.17
2024-12-04 20:54:15,268 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52 pTM=0.521 ipTM=0.585 tol=5.41
2024-12-04 20:56:48,482 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.9 pTM=0.509 ipTM=0.542 tol=6.96
2024-12-04 20:59:21,660 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51.7 pTM=0.509 ipTM=0.558 tol=10.7
2024-12-04 21:01:54,759 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52 pTM=0.506 ipTM=0.523 tol=11.6
2024-12-04 21:04:27,754 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=51.8 pTM=0.498 ipTM=0.497 tol=12.4
2024-12-04 21:07:00,812 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.1 pTM=0.503 ipTM=0.501 tol=6.7
2024-12-04 21:09:33,965 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52 pTM=0.5 ipTM=0.501 tol=7.81
2024-12-04 21:12:07,073 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.1 pTM=0.502 ipTM=0.499 tol=6.9
2024-12-04 21:14:40,191 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.1 pTM=0.504 ipTM=0.513 tol=8.26
2024-12-04 21:17:13,333 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.2 pTM=0.505 ipTM=0.507 tol=6.57
2024-12-04 21:19:46,422 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.2 pTM=0.509 ipTM=0.537 tol=8.68
2024-12-04 21:22:19,497 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.2 pTM=0.507 ipTM=0.518 tol=6.75
2024-12-04 21:24:52,560 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.1 pTM=0.504 ipTM=0.523 tol=4.43
2024-12-04 21:27:25,679 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.2 pTM=0.504 ipTM=0.507 tol=4.16
2024-12-04 21:29:58,786 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.9 pTM=0.498 ipTM=0.493 tol=5.78
2024-12-04 21:32:31,823 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.2 pTM=0.511 ipTM=0.523 tol=9.06
2024-12-04 21:35:04,858 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52 pTM=0.499 ipTM=0.492 tol=4.87
2024-12-04 21:37:37,898 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.3 pTM=0.515 ipTM=0.539 tol=3.5
2024-12-04 21:40:10,901 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.1 pTM=0.501 ipTM=0.507 tol=3.31
2024-12-04 21:42:43,998 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.3 pTM=0.508 ipTM=0.525 tol=4.55
2024-12-04 21:45:17,032 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.1 pTM=0.503 ipTM=0.507 tol=4.17
2024-12-04 21:47:50,091 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.3 pTM=0.506 ipTM=0.508 tol=2.97
2024-12-04 21:50:23,026 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.2 pTM=0.513 ipTM=0.547 tol=3.92
2024-12-04 21:52:56,020 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.2 pTM=0.506 ipTM=0.519 tol=3.56
2024-12-04 21:55:29,045 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51.8 pTM=0.494 ipTM=0.479 tol=3.46
2024-12-04 21:58:02,024 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.1 pTM=0.508 ipTM=0.52 tol=4.96
2024-12-04 22:00:35,050 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.1 pTM=0.503 ipTM=0.514 tol=3.55
2024-12-04 22:03:08,149 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51.9 pTM=0.491 ipTM=0.466 tol=3.05
2024-12-04 22:03:08,152 alphafold2_multimer_v3_model_4_seed_000 took 4745.4s (30 recycles)
2024-12-04 22:05:43,650 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.8 pTM=0.429 ipTM=0.378
2024-12-04 22:08:16,891 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.9 pTM=0.434 ipTM=0.31 tol=16.1
2024-12-04 22:10:49,943 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=51.7 pTM=0.436 ipTM=0.283 tol=11.3
2024-12-04 22:13:23,137 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.9 pTM=0.432 ipTM=0.315 tol=8.61
2024-12-04 22:15:56,431 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.1 pTM=0.428 ipTM=0.298 tol=10
2024-12-04 22:18:29,705 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=51.8 pTM=0.427 ipTM=0.292 tol=7.84
2024-12-04 22:21:02,993 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.2 pTM=0.428 ipTM=0.287 tol=11.1
2024-12-04 22:23:36,340 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.4 pTM=0.427 ipTM=0.284 tol=9.11
2024-12-04 22:26:09,633 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.2 pTM=0.427 ipTM=0.296 tol=7.34
2024-12-04 22:28:43,016 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.2 pTM=0.426 ipTM=0.282 tol=6.06
2024-12-04 22:31:16,357 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.4 pTM=0.427 ipTM=0.276 tol=4.41
2024-12-04 22:33:49,707 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.4 pTM=0.426 ipTM=0.258 tol=3.77
2024-12-04 22:36:23,057 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.4 pTM=0.428 ipTM=0.265 tol=5.5
2024-12-04 22:38:56,469 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.4 pTM=0.427 ipTM=0.257 tol=3.22
2024-12-04 22:41:29,848 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.2 pTM=0.426 ipTM=0.27 tol=2.97
2024-12-04 22:44:03,163 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.3 pTM=0.427 ipTM=0.27 tol=6.18
2024-12-04 22:46:36,517 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.2 pTM=0.427 ipTM=0.271 tol=3.19
2024-12-04 22:49:09,885 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.2 pTM=0.426 ipTM=0.285 tol=3.37
2024-12-04 22:51:43,234 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.3 pTM=0.426 ipTM=0.278 tol=3.72
2024-12-04 22:54:16,574 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.6 pTM=0.427 ipTM=0.251 tol=6.96
2024-12-04 22:56:49,831 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.3 pTM=0.428 ipTM=0.255 tol=4.54
2024-12-04 22:59:23,137 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.4 pTM=0.427 ipTM=0.264 tol=4.2
2024-12-04 23:01:56,458 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.4 pTM=0.426 ipTM=0.25 tol=3.92
2024-12-04 23:04:29,763 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.2 pTM=0.427 ipTM=0.247 tol=7.22
2024-12-04 23:07:03,241 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.2 pTM=0.427 ipTM=0.242 tol=6.14
2024-12-04 23:09:36,554 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.1 pTM=0.427 ipTM=0.245 tol=6.72
2024-12-04 23:12:09,885 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52.2 pTM=0.427 ipTM=0.247 tol=9.41
2024-12-04 23:14:43,207 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52 pTM=0.426 ipTM=0.238 tol=7.3
2024-12-04 23:17:16,482 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.2 pTM=0.427 ipTM=0.232 tol=9.3
2024-12-04 23:19:49,859 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52 pTM=0.428 ipTM=0.231 tol=7
2024-12-04 23:22:23,178 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.2 pTM=0.429 ipTM=0.242 tol=5.45
2024-12-04 23:22:23,181 alphafold2_multimer_v3_model_5_seed_000 took 4752.8s (30 recycles)
2024-12-04 23:22:25,416 reranking models by 'multimer' metric
2024-12-04 23:22:30,454 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 23:30:14,008 Relaxation took 468.6s
2024-12-04 23:30:14,009 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51.9 pTM=0.491 ipTM=0.466
2024-12-04 23:35:30,373 Relaxation took 316.4s
2024-12-04 23:35:30,373 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.6 pTM=0.425 ipTM=0.471
2024-12-04 23:42:36,206 Relaxation took 425.8s
2024-12-04 23:42:36,207 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.9 pTM=0.412 ipTM=0.404
2024-12-04 23:50:18,188 Relaxation took 462.0s
2024-12-04 23:50:18,188 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.2 pTM=0.429 ipTM=0.242
2024-12-04 23:56:08,332 Relaxation took 350.1s
2024-12-04 23:56:08,333 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.7 pTM=0.421 ipTM=0.227
2024-12-04 23:56:14,281 Done