2024-12-04 16:34:46,164 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 16:34:47,906 Running on GPU
2024-12-04 16:34:52,482 Found 6 citations for tools or databases
2024-12-04 16:34:52,483 Query 1/1: AMBRA1_HPS1 (length 1998)
2024-12-04 16:34:52,899 Sleeping for 6s. Reason: PENDING
2024-12-04 16:34:59,166 Sleeping for 8s. Reason: PENDING
2024-12-04 16:35:07,422 Sleeping for 6s. Reason: PENDING
2024-12-04 16:35:13,676 Sleeping for 7s. Reason: PENDING
2024-12-04 16:35:20,938 Sleeping for 8s. Reason: PENDING
2024-12-04 16:35:29,203 Sleeping for 10s. Reason: PENDING
2024-12-04 16:35:39,463 Sleeping for 6s. Reason: PENDING
2024-12-04 16:35:45,725 Sleeping for 9s. Reason: PENDING
2024-12-04 16:35:54,985 Sleeping for 7s. Reason: PENDING
2024-12-04 16:36:02,248 Sleeping for 7s. Reason: PENDING
2024-12-04 16:36:09,514 Sleeping for 10s. Reason: PENDING
2024-12-04 16:36:19,778 Sleeping for 8s. Reason: PENDING
2024-12-04 16:36:28,040 Sleeping for 5s. Reason: PENDING
2024-12-04 16:36:33,302 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:36:41,570 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:36:46,839 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:36:56,098 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:37:03,357 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:37:13,615 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:37:22,872 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:37:29,125 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:37:38,530 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:37:43,784 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:37:53,048 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:37:58,301 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:38:05,552 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:38:10,810 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:38:18,069 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:38:26,326 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:38:36,583 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:38:45,841 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:38:53,101 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:39:01,360 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:39:09,622 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:39:16,882 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:39:27,139 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:39:35,397 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:39:44,661 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:39:52,234 Sleeping for 9s. Reason: PENDING
2024-12-04 16:40:01,489 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:40:10,750 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:40:20,009 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:40:28,275 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:40:35,554 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:40:44,811 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:40:50,066 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:40:56,325 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:41:06,587 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:41:13,842 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:41:20,096 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:41:25,352 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:41:34,611 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:41:44,873 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:41:51,130 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:41:59,385 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:42:12,082 Setting max_seq=508, max_extra_seq=2048
2024-12-04 16:47:28,160 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49.2 pTM=0.425 ipTM=0.228
2024-12-04 16:50:05,053 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.3 pTM=0.432 ipTM=0.41 tol=15.5
2024-12-04 16:52:42,122 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.6 pTM=0.427 ipTM=0.26 tol=11.5
2024-12-04 16:55:19,240 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.1 pTM=0.424 ipTM=0.357 tol=9.16
2024-12-04 16:57:56,383 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.1 pTM=0.423 ipTM=0.24 tol=7.15
2024-12-04 17:00:33,485 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.2 pTM=0.421 ipTM=0.277 tol=7.68
2024-12-04 17:03:10,603 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.3 pTM=0.422 ipTM=0.306 tol=6.58
2024-12-04 17:05:47,740 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.2 pTM=0.421 ipTM=0.288 tol=6.59
2024-12-04 17:08:24,989 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.4 pTM=0.42 ipTM=0.236 tol=6.18
2024-12-04 17:11:02,151 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=50.3 pTM=0.422 ipTM=0.275 tol=6.15
2024-12-04 17:13:39,300 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.3 pTM=0.421 ipTM=0.276 tol=6.69
2024-12-04 17:16:16,443 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.2 pTM=0.426 ipTM=0.302 tol=6.64
2024-12-04 17:18:53,577 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=50.4 pTM=0.423 ipTM=0.227 tol=5.4
2024-12-04 17:21:30,710 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=50.3 pTM=0.421 ipTM=0.214 tol=9.65
2024-12-04 17:24:07,833 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.5 pTM=0.422 ipTM=0.215 tol=7.45
2024-12-04 17:26:44,891 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=50.5 pTM=0.422 ipTM=0.234 tol=6.87
2024-12-04 17:29:22,026 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.4 pTM=0.422 ipTM=0.249 tol=6.62
2024-12-04 17:31:59,150 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=50.4 pTM=0.42 ipTM=0.215 tol=6.38
2024-12-04 17:34:36,278 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=50.6 pTM=0.421 ipTM=0.258 tol=4.05
2024-12-04 17:37:13,443 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=50.6 pTM=0.421 ipTM=0.258 tol=4.14
2024-12-04 17:39:50,553 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=50.5 pTM=0.421 ipTM=0.247 tol=6.21
2024-12-04 17:42:27,660 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=50.6 pTM=0.421 ipTM=0.266 tol=8.56
2024-12-04 17:45:04,786 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=50.6 pTM=0.422 ipTM=0.249 tol=7.66
2024-12-04 17:47:41,896 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=50.6 pTM=0.421 ipTM=0.253 tol=5.61
2024-12-04 17:50:18,977 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=50.5 pTM=0.421 ipTM=0.242 tol=2.71
2024-12-04 17:52:56,116 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=50.7 pTM=0.42 ipTM=0.263 tol=3.89
2024-12-04 17:55:33,209 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=50.5 pTM=0.42 ipTM=0.234 tol=3.19
2024-12-04 17:58:10,296 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=50.7 pTM=0.422 ipTM=0.25 tol=3.11
2024-12-04 18:00:47,355 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=50.7 pTM=0.422 ipTM=0.253 tol=4.09
2024-12-04 18:03:24,430 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.7 pTM=0.421 ipTM=0.223 tol=5.14
2024-12-04 18:06:01,575 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50.7 pTM=0.422 ipTM=0.239 tol=2.79
2024-12-04 18:06:01,577 alphafold2_multimer_v3_model_1_seed_000 took 5025.1s (30 recycles)
2024-12-04 18:08:40,862 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.8 pTM=0.444 ipTM=0.333
2024-12-04 18:11:17,895 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51 pTM=0.447 ipTM=0.569 tol=16.6
2024-12-04 18:13:55,013 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.1 pTM=0.438 ipTM=0.542 tol=12.5
2024-12-04 18:16:32,214 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.1 pTM=0.432 ipTM=0.536 tol=7.97
2024-12-04 18:19:09,506 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=51.2 pTM=0.429 ipTM=0.534 tol=7
2024-12-04 18:21:46,625 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.2 pTM=0.43 ipTM=0.514 tol=10.6
2024-12-04 18:24:23,778 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=51.3 pTM=0.432 ipTM=0.532 tol=5.2
2024-12-04 18:27:00,989 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=51.4 pTM=0.43 ipTM=0.52 tol=5.38
2024-12-04 18:29:38,156 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51.6 pTM=0.432 ipTM=0.534 tol=4.44
2024-12-04 18:32:15,371 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.6 pTM=0.43 ipTM=0.517 tol=4.64
2024-12-04 18:34:52,647 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=51.6 pTM=0.43 ipTM=0.518 tol=4.77
2024-12-04 18:37:29,894 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=51.6 pTM=0.432 ipTM=0.526 tol=6.76
2024-12-04 18:40:06,958 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.5 pTM=0.435 ipTM=0.515 tol=9.45
2024-12-04 18:42:44,063 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=51.3 pTM=0.432 ipTM=0.531 tol=4.54
2024-12-04 18:45:21,208 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=51.4 pTM=0.433 ipTM=0.517 tol=3.8
2024-12-04 18:47:58,346 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=51.4 pTM=0.435 ipTM=0.515 tol=2.66
2024-12-04 18:50:35,468 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=51.4 pTM=0.436 ipTM=0.513 tol=3.63
2024-12-04 18:53:12,612 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=51.2 pTM=0.433 ipTM=0.504 tol=4.31
2024-12-04 18:55:49,790 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=51.5 pTM=0.435 ipTM=0.521 tol=4.52
2024-12-04 18:58:27,045 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=51.4 pTM=0.433 ipTM=0.501 tol=4.52
2024-12-04 19:01:04,261 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=51.3 pTM=0.435 ipTM=0.516 tol=4.58
2024-12-04 19:03:41,557 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51.3 pTM=0.432 ipTM=0.501 tol=3.68
2024-12-04 19:06:18,827 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=51.5 pTM=0.434 ipTM=0.525 tol=3.79
2024-12-04 19:08:56,055 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=51.4 pTM=0.431 ipTM=0.514 tol=4.22
2024-12-04 19:11:33,261 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=51.4 pTM=0.434 ipTM=0.511 tol=4.88
2024-12-04 19:14:10,543 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51.4 pTM=0.43 ipTM=0.519 tol=5.65
2024-12-04 19:16:47,771 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=51.4 pTM=0.431 ipTM=0.514 tol=4.47
2024-12-04 19:19:25,014 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51.3 pTM=0.432 ipTM=0.518 tol=4.75
2024-12-04 19:22:02,230 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=51.5 pTM=0.435 ipTM=0.527 tol=3.3
2024-12-04 19:24:39,421 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=51.3 pTM=0.434 ipTM=0.513 tol=3.21
2024-12-04 19:27:16,636 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=51.5 pTM=0.435 ipTM=0.524 tol=3.29
2024-12-04 19:27:16,638 alphafold2_multimer_v3_model_2_seed_000 took 4872.7s (30 recycles)
2024-12-04 19:29:56,326 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49.1 pTM=0.425 ipTM=0.328
2024-12-04 19:32:33,502 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=50.1 pTM=0.422 ipTM=0.226 tol=21.4
2024-12-04 19:35:10,797 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=50 pTM=0.419 ipTM=0.203 tol=14
2024-12-04 19:37:48,077 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=50.2 pTM=0.421 ipTM=0.219 tol=10.7
2024-12-04 19:40:25,398 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=50.2 pTM=0.422 ipTM=0.287 tol=8.55
2024-12-04 19:43:02,776 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=50.3 pTM=0.422 ipTM=0.258 tol=6.29
2024-12-04 19:45:40,167 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=50.2 pTM=0.422 ipTM=0.249 tol=6.84
2024-12-04 19:48:17,562 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=50.3 pTM=0.421 ipTM=0.205 tol=5.5
2024-12-04 19:50:54,906 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=50.5 pTM=0.425 ipTM=0.211 tol=5.16
2024-12-04 19:53:32,275 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=50.7 pTM=0.424 ipTM=0.218 tol=4.99
2024-12-04 19:56:09,772 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=50.6 pTM=0.426 ipTM=0.214 tol=4.43
2024-12-04 19:58:47,258 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.6 pTM=0.424 ipTM=0.206 tol=3.71
2024-12-04 20:01:24,644 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=50.6 pTM=0.426 ipTM=0.217 tol=3.56
2024-12-04 20:04:02,049 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=50.4 pTM=0.424 ipTM=0.206 tol=3.23
2024-12-04 20:06:39,547 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=50.7 pTM=0.427 ipTM=0.216 tol=3.81
2024-12-04 20:09:16,980 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.5 pTM=0.423 ipTM=0.203 tol=3.6
2024-12-04 20:11:54,495 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.7 pTM=0.427 ipTM=0.215 tol=3.24
2024-12-04 20:14:31,964 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.6 pTM=0.426 ipTM=0.209 tol=3.91
2024-12-04 20:17:09,375 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.8 pTM=0.427 ipTM=0.214 tol=4.22
2024-12-04 20:19:46,771 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50.6 pTM=0.425 ipTM=0.238 tol=4.32
2024-12-04 20:22:24,190 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.9 pTM=0.431 ipTM=0.408 tol=4.28
2024-12-04 20:25:01,650 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.7 pTM=0.423 ipTM=0.224 tol=3.34
2024-12-04 20:27:39,160 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50.9 pTM=0.426 ipTM=0.222 tol=3.91
2024-12-04 20:30:16,584 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.8 pTM=0.424 ipTM=0.242 tol=3.63
2024-12-04 20:32:54,034 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=50.8 pTM=0.426 ipTM=0.294 tol=2.63
2024-12-04 20:35:31,397 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.5 pTM=0.424 ipTM=0.208 tol=3.34
2024-12-04 20:38:08,811 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=50.6 pTM=0.423 ipTM=0.208 tol=7.42
2024-12-04 20:40:46,216 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.7 pTM=0.428 ipTM=0.466 tol=7.17
2024-12-04 20:43:23,659 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.8 pTM=0.427 ipTM=0.237 tol=3.9
2024-12-04 20:46:01,177 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50.7 pTM=0.423 ipTM=0.225 tol=3.91
2024-12-04 20:48:38,607 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.6 pTM=0.425 ipTM=0.23 tol=4.75
2024-12-04 20:48:38,609 alphafold2_multimer_v3_model_3_seed_000 took 4879.6s (30 recycles)
2024-12-04 20:51:18,233 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.5 pTM=0.435 ipTM=0.281
2024-12-04 20:53:55,611 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.5 pTM=0.436 ipTM=0.419 tol=16.7
2024-12-04 20:56:33,031 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=49.9 pTM=0.442 ipTM=0.658 tol=22.9
2024-12-04 20:59:10,419 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50.2 pTM=0.436 ipTM=0.534 tol=14.1
2024-12-04 21:01:47,627 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=50.6 pTM=0.434 ipTM=0.602 tol=9.74
2024-12-04 21:04:24,884 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=50.3 pTM=0.433 ipTM=0.562 tol=7.92
2024-12-04 21:07:02,077 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.3 pTM=0.435 ipTM=0.565 tol=11.2
2024-12-04 21:09:39,355 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50.1 pTM=0.434 ipTM=0.549 tol=9.08
2024-12-04 21:12:16,595 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=50.2 pTM=0.436 ipTM=0.559 tol=6.51
2024-12-04 21:14:53,861 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=50.5 pTM=0.434 ipTM=0.555 tol=5.96
2024-12-04 21:17:31,151 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50.4 pTM=0.433 ipTM=0.564 tol=6.63
2024-12-04 21:20:08,432 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=50.3 pTM=0.434 ipTM=0.556 tol=6.66
2024-12-04 21:22:45,688 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50.3 pTM=0.433 ipTM=0.568 tol=6.4
2024-12-04 21:25:22,935 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=50.4 pTM=0.435 ipTM=0.583 tol=6.87
2024-12-04 21:28:00,213 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=50.5 pTM=0.434 ipTM=0.584 tol=5.68
2024-12-04 21:30:37,498 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=50.2 pTM=0.434 ipTM=0.552 tol=4.73
2024-12-04 21:33:14,782 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=50.5 pTM=0.433 ipTM=0.574 tol=8.52
2024-12-04 21:35:52,064 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.6 pTM=0.432 ipTM=0.563 tol=5.06
2024-12-04 21:38:29,327 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.7 pTM=0.43 ipTM=0.573 tol=2.94
2024-12-04 21:41:06,655 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50.7 pTM=0.432 ipTM=0.568 tol=2.96
2024-12-04 21:43:43,890 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.7 pTM=0.433 ipTM=0.567 tol=6.23
2024-12-04 21:46:21,129 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50.5 pTM=0.434 ipTM=0.554 tol=5.23
2024-12-04 21:48:58,352 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.8 pTM=0.432 ipTM=0.573 tol=4.88
2024-12-04 21:51:35,562 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.6 pTM=0.431 ipTM=0.559 tol=3.25
2024-12-04 21:54:12,806 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50.8 pTM=0.431 ipTM=0.577 tol=3.54
2024-12-04 21:56:50,013 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=50.6 pTM=0.432 ipTM=0.569 tol=5.53
2024-12-04 21:59:27,229 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=50.7 pTM=0.43 ipTM=0.557 tol=6.89
2024-12-04 22:02:04,462 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.6 pTM=0.433 ipTM=0.559 tol=4.39
2024-12-04 22:04:41,702 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=50.9 pTM=0.432 ipTM=0.587 tol=3.65
2024-12-04 22:07:18,804 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=50.9 pTM=0.434 ipTM=0.592 tol=6.3
2024-12-04 22:09:56,009 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50.9 pTM=0.431 ipTM=0.566 tol=5.41
2024-12-04 22:09:56,011 alphafold2_multimer_v3_model_4_seed_000 took 4875.0s (30 recycles)
2024-12-04 22:12:35,612 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48.6 pTM=0.419 ipTM=0.201
2024-12-04 22:15:12,843 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.9 pTM=0.427 ipTM=0.209 tol=19.8
2024-12-04 22:17:50,117 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.1 pTM=0.423 ipTM=0.205 tol=13.2
2024-12-04 22:20:27,413 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.2 pTM=0.425 ipTM=0.211 tol=7.66
2024-12-04 22:23:04,697 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.5 pTM=0.422 ipTM=0.203 tol=10.6
2024-12-04 22:25:41,943 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.6 pTM=0.422 ipTM=0.204 tol=8.64
2024-12-04 22:28:19,298 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=50.6 pTM=0.423 ipTM=0.201 tol=7.86
2024-12-04 22:30:56,643 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=50.7 pTM=0.423 ipTM=0.202 tol=8.18
2024-12-04 22:33:33,946 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=50.7 pTM=0.424 ipTM=0.205 tol=5.85
2024-12-04 22:36:11,228 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=50.9 pTM=0.423 ipTM=0.203 tol=8.88
2024-12-04 22:38:48,522 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=50.7 pTM=0.424 ipTM=0.201 tol=8.55
2024-12-04 22:41:25,845 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50.7 pTM=0.425 ipTM=0.204 tol=4.2
2024-12-04 22:44:03,136 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=50.6 pTM=0.425 ipTM=0.205 tol=4.6
2024-12-04 22:46:40,399 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.6 pTM=0.425 ipTM=0.205 tol=8.66
2024-12-04 22:49:17,761 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=50.8 pTM=0.424 ipTM=0.201 tol=4.26
2024-12-04 22:51:55,011 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=50.5 pTM=0.425 ipTM=0.204 tol=7.98
2024-12-04 22:54:32,296 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=50.6 pTM=0.424 ipTM=0.205 tol=6.59
2024-12-04 22:57:09,454 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.6 pTM=0.424 ipTM=0.205 tol=5.07
2024-12-04 22:59:46,619 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.6 pTM=0.426 ipTM=0.205 tol=5.4
2024-12-04 23:02:23,829 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50.7 pTM=0.425 ipTM=0.207 tol=4.76
2024-12-04 23:05:01,078 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.8 pTM=0.425 ipTM=0.205 tol=4.13
2024-12-04 23:07:38,385 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50.8 pTM=0.427 ipTM=0.208 tol=3.95
2024-12-04 23:10:15,642 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.8 pTM=0.426 ipTM=0.211 tol=8.62
2024-12-04 23:12:52,853 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.8 pTM=0.426 ipTM=0.209 tol=4.75
2024-12-04 23:15:30,097 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.8 pTM=0.425 ipTM=0.206 tol=3.83
2024-12-04 23:18:07,354 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.7 pTM=0.426 ipTM=0.207 tol=3.4
2024-12-04 23:20:44,602 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.7 pTM=0.425 ipTM=0.202 tol=7.91
2024-12-04 23:23:21,799 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.6 pTM=0.424 ipTM=0.204 tol=4.42
2024-12-04 23:25:58,992 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.8 pTM=0.427 ipTM=0.21 tol=6.36
2024-12-04 23:28:36,188 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.7 pTM=0.426 ipTM=0.208 tol=6.75
2024-12-04 23:31:13,349 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.7 pTM=0.425 ipTM=0.21 tol=6.62
2024-12-04 23:31:13,351 alphafold2_multimer_v3_model_5_seed_000 took 4875.0s (30 recycles)
2024-12-04 23:31:15,697 reranking models by 'multimer' metric
2024-12-04 23:31:17,849 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 23:36:42,781 Relaxation took 327.1s
2024-12-04 23:36:42,781 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50.9 pTM=0.431 ipTM=0.566
2024-12-04 23:43:08,301 Relaxation took 385.5s
2024-12-04 23:43:08,301 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=51.5 pTM=0.435 ipTM=0.524
2024-12-04 23:50:23,089 Relaxation took 434.8s
2024-12-04 23:50:23,090 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50.7 pTM=0.422 ipTM=0.239
2024-12-04 23:57:26,744 Relaxation took 423.7s
2024-12-04 23:57:26,744 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.6 pTM=0.425 ipTM=0.23
2024-12-05 00:03:58,938 Relaxation took 392.2s
2024-12-05 00:03:58,939 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.7 pTM=0.425 ipTM=0.21
2024-12-05 00:04:04,287 Done