2024-12-04 16:34:46,164 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 16:34:47,906 Running on GPU
2024-12-04 16:34:52,483 Found 6 citations for tools or databases
2024-12-04 16:34:52,483 Query 1/1: AMBRA1_PPP4R1L (length 1713)
2024-12-04 16:34:52,860 Sleeping for 7s. Reason: PENDING
2024-12-04 16:35:00,116 Sleeping for 5s. Reason: PENDING
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2024-12-04 16:37:46,339 Sleeping for 5s. Reason: PENDING
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2024-12-04 16:38:04,118 Sleeping for 9s. Reason: PENDING
2024-12-04 16:38:13,524 Sleeping for 7s. Reason: PENDING
2024-12-04 16:38:20,792 Sleeping for 5s. Reason: PENDING
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2024-12-04 16:39:06,587 Sleeping for 10s. Reason: PENDING
2024-12-04 16:39:16,850 Sleeping for 6s. Reason: PENDING
2024-12-04 16:39:23,107 Sleeping for 5s. Reason: PENDING
2024-12-04 16:39:28,361 Sleeping for 7s. Reason: PENDING
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2024-12-04 16:39:46,146 Sleeping for 8s. Reason: PENDING
2024-12-04 16:39:54,406 Sleeping for 7s. Reason: PENDING
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2024-12-04 16:40:22,449 Sleeping for 6s. Reason: PENDING
2024-12-04 16:40:28,706 Sleeping for 7s. Reason: PENDING
2024-12-04 16:40:35,960 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:40:46,216 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:40:51,465 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:41:01,727 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:41:06,981 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:41:12,239 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:41:21,493 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:41:31,107 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:41:41,366 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:41:46,627 Sleeping for 7s. Reason: RUNNING
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2024-12-04 16:42:41,695 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:42:46,957 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:42:55,226 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:43:04,488 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:43:15,107 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:43:23,357 Sleeping for 6s. Reason: RUNNING
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2024-12-04 16:43:38,869 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:43:44,123 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:43:49,375 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:43:56,643 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:44:06,905 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:44:15,166 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:44:29,557 Sleeping for 8s. Reason: PENDING
2024-12-04 16:44:37,813 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:44:45,075 Sleeping for 6s. Reason: RUNNING
2024-12-04 16:44:51,332 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:44:59,586 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:45:04,838 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:45:10,095 Sleeping for 9s. Reason: RUNNING
2024-12-04 16:45:19,373 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:45:27,634 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:45:34,893 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:45:43,151 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:45:51,420 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:45:59,677 Sleeping for 10s. Reason: RUNNING
2024-12-04 16:46:09,934 Sleeping for 5s. Reason: RUNNING
2024-12-04 16:46:15,191 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:46:23,452 Sleeping for 7s. Reason: RUNNING
2024-12-04 16:46:30,711 Sleeping for 8s. Reason: RUNNING
2024-12-04 16:46:41,710 Setting max_seq=508, max_extra_seq=2048
2024-12-04 16:51:15,921 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=40.7 pTM=0.396 ipTM=0.251
2024-12-04 16:52:54,798 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=40.9 pTM=0.392 ipTM=0.251 tol=16.5
2024-12-04 16:54:33,888 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=40.5 pTM=0.384 ipTM=0.25 tol=15.5
2024-12-04 16:56:13,045 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=40.6 pTM=0.384 ipTM=0.241 tol=12.8
2024-12-04 16:57:52,148 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=41.2 pTM=0.385 ipTM=0.243 tol=10.5
2024-12-04 16:59:31,180 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=40.9 pTM=0.382 ipTM=0.242 tol=6.29
2024-12-04 17:01:10,258 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=40.9 pTM=0.383 ipTM=0.242 tol=7.06
2024-12-04 17:02:49,290 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41.1 pTM=0.385 ipTM=0.276 tol=6.81
2024-12-04 17:04:28,378 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=41.5 pTM=0.387 ipTM=0.305 tol=6.93
2024-12-04 17:06:07,551 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=41.3 pTM=0.387 ipTM=0.308 tol=8.38
2024-12-04 17:07:46,708 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=41.2 pTM=0.388 ipTM=0.317 tol=8.38
2024-12-04 17:09:25,867 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=41.3 pTM=0.392 ipTM=0.333 tol=8.51
2024-12-04 17:11:05,035 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=41.9 pTM=0.394 ipTM=0.345 tol=9.65
2024-12-04 17:12:44,136 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=41.6 pTM=0.392 ipTM=0.346 tol=5.19
2024-12-04 17:14:23,233 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=41.6 pTM=0.393 ipTM=0.348 tol=6.5
2024-12-04 17:16:02,290 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=41.5 pTM=0.392 ipTM=0.359 tol=8.4
2024-12-04 17:17:41,318 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=41.8 pTM=0.394 ipTM=0.369 tol=7.05
2024-12-04 17:19:20,375 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=41.6 pTM=0.393 ipTM=0.368 tol=6.98
2024-12-04 17:20:59,412 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=41.6 pTM=0.396 ipTM=0.374 tol=6.23
2024-12-04 17:22:38,452 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=41.6 pTM=0.395 ipTM=0.378 tol=6.36
2024-12-04 17:24:17,479 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=41.9 pTM=0.394 ipTM=0.374 tol=4.56
2024-12-04 17:25:56,469 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=41.9 pTM=0.396 ipTM=0.378 tol=8.16
2024-12-04 17:27:35,534 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=41.9 pTM=0.397 ipTM=0.378 tol=9.48
2024-12-04 17:29:14,590 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=41.7 pTM=0.395 ipTM=0.373 tol=6.46
2024-12-04 17:30:53,711 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=41.8 pTM=0.394 ipTM=0.375 tol=7.04
2024-12-04 17:32:32,759 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=41.8 pTM=0.395 ipTM=0.37 tol=6.19
2024-12-04 17:34:11,886 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=41.8 pTM=0.395 ipTM=0.375 tol=4.95
2024-12-04 17:35:51,011 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=41.7 pTM=0.393 ipTM=0.372 tol=8.45
2024-12-04 17:37:30,156 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=41.6 pTM=0.394 ipTM=0.369 tol=6.25
2024-12-04 17:39:09,250 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=41.7 pTM=0.394 ipTM=0.371 tol=7.96
2024-12-04 17:40:48,332 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=41.8 pTM=0.395 ipTM=0.372 tol=7.87
2024-12-04 17:40:48,334 alphafold2_multimer_v3_model_1_seed_000 took 3243.1s (30 recycles)
2024-12-04 17:42:28,965 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=41.3 pTM=0.415 ipTM=0.333
2024-12-04 17:44:08,180 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=42 pTM=0.386 ipTM=0.241 tol=14.1
2024-12-04 17:45:47,459 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.5 pTM=0.376 ipTM=0.228 tol=13.2
2024-12-04 17:47:26,787 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=41.5 pTM=0.372 ipTM=0.216 tol=8.51
2024-12-04 17:49:06,077 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=41.4 pTM=0.372 ipTM=0.257 tol=13.1
2024-12-04 17:50:45,386 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=41.7 pTM=0.374 ipTM=0.284 tol=10.4
2024-12-04 17:52:24,692 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=41.6 pTM=0.373 ipTM=0.278 tol=6.58
2024-12-04 17:54:03,989 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=41.6 pTM=0.372 ipTM=0.257 tol=6.73
2024-12-04 17:55:43,337 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=41.7 pTM=0.375 ipTM=0.24 tol=6.64
2024-12-04 17:57:22,578 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=41.8 pTM=0.377 ipTM=0.263 tol=5.49
2024-12-04 17:59:01,733 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=41.9 pTM=0.381 ipTM=0.318 tol=8.09
2024-12-04 18:00:40,960 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=42.1 pTM=0.381 ipTM=0.316 tol=7.26
2024-12-04 18:02:20,177 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=42.1 pTM=0.383 ipTM=0.325 tol=6.21
2024-12-04 18:03:59,367 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=42.1 pTM=0.384 ipTM=0.344 tol=7.18
2024-12-04 18:05:38,619 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=42.1 pTM=0.383 ipTM=0.353 tol=6.66
2024-12-04 18:07:17,844 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=42.3 pTM=0.385 ipTM=0.363 tol=5.14
2024-12-04 18:08:57,051 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=42.3 pTM=0.385 ipTM=0.366 tol=4.32
2024-12-04 18:10:36,251 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=42.4 pTM=0.385 ipTM=0.365 tol=3.58
2024-12-04 18:12:15,443 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=42.5 pTM=0.385 ipTM=0.373 tol=3.78
2024-12-04 18:13:54,633 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=42.3 pTM=0.384 ipTM=0.37 tol=3.13
2024-12-04 18:15:33,861 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=42.5 pTM=0.386 ipTM=0.371 tol=3.38
2024-12-04 18:17:13,031 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=42.2 pTM=0.387 ipTM=0.377 tol=3.95
2024-12-04 18:18:52,185 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=42.4 pTM=0.386 ipTM=0.373 tol=3.64
2024-12-04 18:20:31,304 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=42.3 pTM=0.387 ipTM=0.374 tol=3.88
2024-12-04 18:22:10,470 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=42.3 pTM=0.387 ipTM=0.374 tol=3.53
2024-12-04 18:23:49,643 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=42.3 pTM=0.388 ipTM=0.374 tol=3.77
2024-12-04 18:25:28,863 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=42.5 pTM=0.389 ipTM=0.379 tol=2.66
2024-12-04 18:27:08,070 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=42.5 pTM=0.392 ipTM=0.385 tol=4.14
2024-12-04 18:28:47,276 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=42.1 pTM=0.388 ipTM=0.38 tol=3.33
2024-12-04 18:30:26,519 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=42.3 pTM=0.393 ipTM=0.384 tol=3.47
2024-12-04 18:32:05,717 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=42.2 pTM=0.389 ipTM=0.382 tol=9.48
2024-12-04 18:32:05,719 alphafold2_multimer_v3_model_2_seed_000 took 3075.6s (30 recycles)
2024-12-04 18:33:47,008 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=40.2 pTM=0.387 ipTM=0.248
2024-12-04 18:35:26,626 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=40.7 pTM=0.384 ipTM=0.241 tol=24.1
2024-12-04 18:37:06,293 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=40.7 pTM=0.384 ipTM=0.257 tol=17.5
2024-12-04 18:38:45,863 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=40.4 pTM=0.379 ipTM=0.253 tol=10.3
2024-12-04 18:40:25,397 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=40.7 pTM=0.382 ipTM=0.25 tol=11
2024-12-04 18:42:04,807 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=40.6 pTM=0.385 ipTM=0.252 tol=12
2024-12-04 18:43:44,342 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=40.7 pTM=0.379 ipTM=0.242 tol=7.66
2024-12-04 18:45:23,922 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=40.9 pTM=0.383 ipTM=0.254 tol=11.8
2024-12-04 18:47:03,556 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41 pTM=0.381 ipTM=0.237 tol=10.4
2024-12-04 18:48:43,225 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.3 pTM=0.381 ipTM=0.236 tol=5.87
2024-12-04 18:50:22,900 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41 pTM=0.376 ipTM=0.236 tol=8.42
2024-12-04 18:52:02,507 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.3 pTM=0.376 ipTM=0.22 tol=7.93
2024-12-04 18:53:42,117 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.2 pTM=0.383 ipTM=0.245 tol=8.71
2024-12-04 18:55:21,743 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=41.5 pTM=0.38 ipTM=0.227 tol=7.05
2024-12-04 18:57:01,348 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41.3 pTM=0.38 ipTM=0.233 tol=6.47
2024-12-04 18:58:40,909 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.4 pTM=0.381 ipTM=0.238 tol=8.83
2024-12-04 19:00:20,519 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=41.2 pTM=0.378 ipTM=0.229 tol=7.92
2024-12-04 19:02:00,177 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=41.4 pTM=0.375 ipTM=0.22 tol=8.04
2024-12-04 19:03:39,858 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=41.2 pTM=0.376 ipTM=0.226 tol=6.99
2024-12-04 19:05:19,476 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=41.6 pTM=0.375 ipTM=0.219 tol=5.67
2024-12-04 19:06:59,099 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=41.6 pTM=0.377 ipTM=0.221 tol=5.39
2024-12-04 19:08:38,726 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=41.7 pTM=0.379 ipTM=0.227 tol=4.3
2024-12-04 19:10:18,277 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=41.4 pTM=0.378 ipTM=0.236 tol=8.63
2024-12-04 19:11:57,924 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=41.5 pTM=0.374 ipTM=0.218 tol=5.82
2024-12-04 19:13:37,625 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=41.3 pTM=0.378 ipTM=0.229 tol=5.26
2024-12-04 19:15:17,213 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=41.8 pTM=0.378 ipTM=0.219 tol=8.15
2024-12-04 19:16:56,806 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=41.7 pTM=0.385 ipTM=0.239 tol=7.34
2024-12-04 19:18:36,464 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=41.4 pTM=0.379 ipTM=0.225 tol=4.73
2024-12-04 19:20:16,068 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41.3 pTM=0.38 ipTM=0.243 tol=4.1
2024-12-04 19:21:55,784 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=41.4 pTM=0.37 ipTM=0.204 tol=10.1
2024-12-04 19:23:35,382 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=41.9 pTM=0.385 ipTM=0.234 tol=10.8
2024-12-04 19:23:35,383 alphafold2_multimer_v3_model_3_seed_000 took 3087.9s (30 recycles)
2024-12-04 19:25:16,349 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=39.3 pTM=0.403 ipTM=0.33
2024-12-04 19:26:55,858 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=39.1 pTM=0.392 ipTM=0.3 tol=22
2024-12-04 19:28:35,365 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=40.1 pTM=0.405 ipTM=0.333 tol=12.8
2024-12-04 19:30:14,858 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=39.5 pTM=0.397 ipTM=0.279 tol=17.9
2024-12-04 19:31:54,291 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=39.2 pTM=0.396 ipTM=0.284 tol=13.8
2024-12-04 19:33:33,759 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=39.6 pTM=0.399 ipTM=0.282 tol=10.6
2024-12-04 19:35:13,336 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=39.5 pTM=0.393 ipTM=0.286 tol=13.2
2024-12-04 19:36:52,814 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=39.8 pTM=0.398 ipTM=0.287 tol=9.32
2024-12-04 19:38:32,332 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=39.5 pTM=0.395 ipTM=0.282 tol=7.75
2024-12-04 19:40:11,863 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=40 pTM=0.399 ipTM=0.278 tol=7.84
2024-12-04 19:41:51,362 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=40.1 pTM=0.397 ipTM=0.288 tol=8.68
2024-12-04 19:43:30,864 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=40.1 pTM=0.4 ipTM=0.295 tol=6.55
2024-12-04 19:45:10,324 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=40.3 pTM=0.401 ipTM=0.287 tol=6.31
2024-12-04 19:46:49,703 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=40.2 pTM=0.402 ipTM=0.285 tol=6.37
2024-12-04 19:48:29,075 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=40.1 pTM=0.402 ipTM=0.296 tol=6.71
2024-12-04 19:50:08,472 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=40.7 pTM=0.403 ipTM=0.321 tol=5.94
2024-12-04 19:51:47,809 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=40.3 pTM=0.404 ipTM=0.294 tol=6.24
2024-12-04 19:53:27,237 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=40.7 pTM=0.406 ipTM=0.304 tol=5.91
2024-12-04 19:55:06,673 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=40.4 pTM=0.405 ipTM=0.301 tol=4.25
2024-12-04 19:56:46,205 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=40.8 pTM=0.406 ipTM=0.299 tol=5.53
2024-12-04 19:58:25,654 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=40.7 pTM=0.406 ipTM=0.293 tol=5.66
2024-12-04 20:00:05,100 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=40.9 pTM=0.406 ipTM=0.328 tol=3.17
2024-12-04 20:01:44,507 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=40.3 pTM=0.405 ipTM=0.294 tol=3.42
2024-12-04 20:03:23,921 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=40.9 pTM=0.407 ipTM=0.324 tol=5.45
2024-12-04 20:05:03,331 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=40.3 pTM=0.401 ipTM=0.294 tol=5.83
2024-12-04 20:06:42,791 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=40.6 pTM=0.407 ipTM=0.301 tol=5.94
2024-12-04 20:08:22,262 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=41.3 pTM=0.41 ipTM=0.337 tol=5.77
2024-12-04 20:10:01,768 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=40.7 pTM=0.41 ipTM=0.315 tol=4.41
2024-12-04 20:11:41,300 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=40.5 pTM=0.406 ipTM=0.305 tol=5.56
2024-12-04 20:13:20,813 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=40.6 pTM=0.408 ipTM=0.313 tol=6.26
2024-12-04 20:15:00,317 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=40.6 pTM=0.407 ipTM=0.317 tol=8.12
2024-12-04 20:15:00,319 alphafold2_multimer_v3_model_4_seed_000 took 3083.2s (30 recycles)
2024-12-04 20:16:41,606 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=39.9 pTM=0.387 ipTM=0.263
2024-12-04 20:18:21,245 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=40.1 pTM=0.385 ipTM=0.245 tol=17
2024-12-04 20:20:00,991 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=40.5 pTM=0.388 ipTM=0.247 tol=12.2
2024-12-04 20:21:40,624 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=41.2 pTM=0.388 ipTM=0.229 tol=9.58
2024-12-04 20:23:20,197 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=42.3 pTM=0.406 ipTM=0.236 tol=12.4
2024-12-04 20:24:59,673 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=42.1 pTM=0.409 ipTM=0.243 tol=11.5
2024-12-04 20:26:39,125 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=42.8 pTM=0.418 ipTM=0.267 tol=12.4
2024-12-04 20:28:18,589 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=42.5 pTM=0.414 ipTM=0.266 tol=8.86
2024-12-04 20:29:57,989 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=43.1 pTM=0.419 ipTM=0.261 tol=6.5
2024-12-04 20:31:37,408 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=43.1 pTM=0.425 ipTM=0.266 tol=5.5
2024-12-04 20:33:16,768 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.9 pTM=0.42 ipTM=0.257 tol=5.38
2024-12-04 20:34:56,142 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=42.5 pTM=0.416 ipTM=0.258 tol=6.62
2024-12-04 20:36:35,482 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=43.2 pTM=0.419 ipTM=0.262 tol=10
2024-12-04 20:38:14,834 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.4 pTM=0.415 ipTM=0.266 tol=8.38
2024-12-04 20:39:54,275 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=43.4 pTM=0.423 ipTM=0.26 tol=8.05
2024-12-04 20:41:33,674 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.8 pTM=0.415 ipTM=0.25 tol=5.79
2024-12-04 20:43:13,048 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=43.5 pTM=0.422 ipTM=0.255 tol=6.18
2024-12-04 20:44:52,453 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.7 pTM=0.417 ipTM=0.252 tol=4.64
2024-12-04 20:46:31,823 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.3 pTM=0.424 ipTM=0.253 tol=3.21
2024-12-04 20:48:11,145 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.8 pTM=0.418 ipTM=0.258 tol=4.3
2024-12-04 20:49:50,551 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.8 pTM=0.425 ipTM=0.251 tol=5.88
2024-12-04 20:51:29,964 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43 pTM=0.418 ipTM=0.251 tol=5.41
2024-12-04 20:53:09,342 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.6 pTM=0.422 ipTM=0.245 tol=3.59
2024-12-04 20:54:48,765 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43 pTM=0.414 ipTM=0.252 tol=5.95
2024-12-04 20:56:28,157 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=43.6 pTM=0.424 ipTM=0.25 tol=5.81
2024-12-04 20:58:07,550 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43 pTM=0.414 ipTM=0.249 tol=6.65
2024-12-04 20:59:46,976 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43.6 pTM=0.424 ipTM=0.251 tol=4.08
2024-12-04 21:01:26,354 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.2 pTM=0.424 ipTM=0.263 tol=6.95
2024-12-04 21:03:05,688 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43.5 pTM=0.428 ipTM=0.252 tol=5.84
2024-12-04 21:04:44,964 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.1 pTM=0.419 ipTM=0.247 tol=4.14
2024-12-04 21:06:24,257 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=43.4 pTM=0.421 ipTM=0.247 tol=6.32
2024-12-04 21:06:24,259 alphafold2_multimer_v3_model_5_seed_000 took 3082.2s (30 recycles)
2024-12-04 21:06:25,974 reranking models by 'multimer' metric
2024-12-04 21:06:32,210 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 21:11:09,113 Relaxation took 283.1s
2024-12-04 21:11:09,113 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=42.2 pTM=0.389 ipTM=0.382
2024-12-04 21:16:17,765 Relaxation took 308.7s
2024-12-04 21:16:17,765 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=41.8 pTM=0.395 ipTM=0.372
2024-12-04 21:21:13,859 Relaxation took 296.1s
2024-12-04 21:21:13,860 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=40.6 pTM=0.407 ipTM=0.317
2024-12-04 21:24:47,417 Relaxation took 213.6s
2024-12-04 21:24:47,418 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=43.4 pTM=0.421 ipTM=0.247
2024-12-04 21:29:24,807 Relaxation took 277.4s
2024-12-04 21:29:24,807 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=41.9 pTM=0.385 ipTM=0.234
2024-12-04 21:29:29,060 Done