2024-12-11 13:24:13,228 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-11 13:24:14,765 Running on GPU
2024-12-11 13:24:19,113 Found 6 citations for tools or databases
2024-12-11 13:24:19,113 Query 1/1: AMOT_WWP1 (length 2006)
2024-12-11 13:24:19,585 Sleeping for 9s. Reason: PENDING
2024-12-11 13:24:28,846 Sleeping for 7s. Reason: PENDING
2024-12-11 13:24:36,105 Sleeping for 10s. Reason: PENDING
2024-12-11 13:24:46,365 Sleeping for 5s. Reason: PENDING
2024-12-11 13:24:51,619 Sleeping for 5s. Reason: PENDING
2024-12-11 13:24:56,881 Sleeping for 9s. Reason: PENDING
2024-12-11 13:25:06,142 Sleeping for 6s. Reason: PENDING
2024-12-11 13:25:12,404 Sleeping for 7s. Reason: PENDING
2024-12-11 13:25:19,674 Sleeping for 8s. Reason: PENDING
2024-12-11 13:25:27,939 Sleeping for 7s. Reason: PENDING
2024-12-11 13:25:35,197 Sleeping for 7s. Reason: PENDING
2024-12-11 13:25:42,455 Sleeping for 9s. Reason: PENDING
2024-12-11 13:25:51,720 Sleeping for 5s. Reason: PENDING
2024-12-11 13:25:56,973 Sleeping for 8s. Reason: PENDING
2024-12-11 13:26:05,240 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:26:15,500 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:26:25,772 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:26:32,028 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:26:42,291 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:26:47,546 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:26:57,806 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:27:05,065 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:27:13,326 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:27:18,585 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:27:27,849 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:27:33,114 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:27:42,380 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:27:48,644 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:27:54,906 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:28:04,176 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:28:11,432 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:28:18,693 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:28:24,950 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:28:33,206 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:28:43,474 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:28:50,742 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:28:59,873 Sleeping for 8s. Reason: PENDING
2024-12-11 13:29:08,133 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:29:14,395 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:29:23,666 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:29:29,922 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:29:38,186 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:29:46,441 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:29:51,703 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:29:57,963 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:30:03,227 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:30:08,488 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:30:13,748 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:30:23,007 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:30:31,264 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:30:37,519 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:30:46,773 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:30:57,044 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:31:05,303 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:31:14,565 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:31:30,489 Setting max_seq=508, max_extra_seq=2048
2024-12-11 13:37:36,530 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=41.5 pTM=0.321 ipTM=0.205
2024-12-11 13:39:40,734 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=41.9 pTM=0.335 ipTM=0.227 tol=21.5
2024-12-11 13:41:45,024 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=41.9 pTM=0.334 ipTM=0.203 tol=17.8
2024-12-11 13:43:49,256 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=42.2 pTM=0.334 ipTM=0.208 tol=11.7
2024-12-11 13:45:53,533 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=42.1 pTM=0.333 ipTM=0.209 tol=10.1
2024-12-11 13:47:57,795 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=41.8 pTM=0.332 ipTM=0.214 tol=14.9
2024-12-11 13:50:02,002 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=42 pTM=0.332 ipTM=0.216 tol=13
2024-12-11 13:52:06,157 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41.8 pTM=0.331 ipTM=0.217 tol=11.4
2024-12-11 13:54:10,267 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=42.3 pTM=0.331 ipTM=0.217 tol=17.1
2024-12-11 13:56:14,434 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=42.4 pTM=0.332 ipTM=0.217 tol=18.6
2024-12-11 13:58:18,611 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42.5 pTM=0.331 ipTM=0.219 tol=16.8
2024-12-11 14:00:22,817 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=42.5 pTM=0.331 ipTM=0.216 tol=11.8
2024-12-11 14:02:26,917 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=42.2 pTM=0.331 ipTM=0.217 tol=7.41
2024-12-11 14:04:30,819 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=42.6 pTM=0.331 ipTM=0.216 tol=4.11
2024-12-11 14:06:34,826 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42.3 pTM=0.33 ipTM=0.216 tol=3.26
2024-12-11 14:08:38,763 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=42.4 pTM=0.331 ipTM=0.216 tol=3.1
2024-12-11 14:10:42,836 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=42.5 pTM=0.33 ipTM=0.216 tol=4.45
2024-12-11 14:12:46,855 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=42.5 pTM=0.331 ipTM=0.215 tol=5.94
2024-12-11 14:14:51,069 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=42.4 pTM=0.33 ipTM=0.216 tol=4.76
2024-12-11 14:16:55,327 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42.3 pTM=0.331 ipTM=0.215 tol=5.07
2024-12-11 14:18:59,647 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=42.3 pTM=0.33 ipTM=0.215 tol=6.9
2024-12-11 14:21:03,915 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.3 pTM=0.33 ipTM=0.214 tol=5.22
2024-12-11 14:23:08,005 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42.3 pTM=0.328 ipTM=0.215 tol=7.29
2024-12-11 14:25:12,111 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=42.5 pTM=0.331 ipTM=0.216 tol=3.8
2024-12-11 14:27:16,183 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42.5 pTM=0.328 ipTM=0.215 tol=2.97
2024-12-11 14:29:20,316 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=42.4 pTM=0.329 ipTM=0.215 tol=2.81
2024-12-11 14:31:24,376 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=42.6 pTM=0.329 ipTM=0.215 tol=3.2
2024-12-11 14:33:28,455 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=42.8 pTM=0.331 ipTM=0.216 tol=2.73
2024-12-11 14:35:32,466 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=42.7 pTM=0.329 ipTM=0.216 tol=2.81
2024-12-11 14:37:36,422 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=42.6 pTM=0.33 ipTM=0.216 tol=2.64
2024-12-11 14:39:40,401 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=42.8 pTM=0.331 ipTM=0.217 tol=2.58
2024-12-11 14:39:40,403 alphafold2_multimer_v3_model_1_seed_000 took 4064.9s (30 recycles)
2024-12-11 14:41:47,897 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=41.4 pTM=0.319 ipTM=0.19
2024-12-11 14:43:52,250 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=43.2 pTM=0.334 ipTM=0.191 tol=26.6
2024-12-11 14:45:56,718 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=43.4 pTM=0.336 ipTM=0.193 tol=16
2024-12-11 14:48:01,006 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=43.5 pTM=0.335 ipTM=0.199 tol=12.8
2024-12-11 14:50:05,137 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=43.4 pTM=0.335 ipTM=0.194 tol=11.6
2024-12-11 14:52:09,310 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=43.1 pTM=0.334 ipTM=0.186 tol=10.3
2024-12-11 14:54:13,450 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=43.1 pTM=0.335 ipTM=0.195 tol=11.6
2024-12-11 14:56:17,798 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=43.4 pTM=0.335 ipTM=0.188 tol=10.2
2024-12-11 14:58:22,119 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=43.2 pTM=0.335 ipTM=0.188 tol=7.98
2024-12-11 15:00:26,347 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=43.4 pTM=0.336 ipTM=0.188 tol=8.58
2024-12-11 15:02:30,709 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=43.2 pTM=0.335 ipTM=0.188 tol=9.48
2024-12-11 15:04:35,062 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=43.2 pTM=0.336 ipTM=0.198 tol=8.85
2024-12-11 15:06:39,509 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=43.2 pTM=0.336 ipTM=0.189 tol=6.15
2024-12-11 15:08:43,898 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=43.4 pTM=0.335 ipTM=0.188 tol=9.07
2024-12-11 15:10:48,206 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=43.3 pTM=0.334 ipTM=0.186 tol=12.1
2024-12-11 15:12:52,617 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=43.4 pTM=0.333 ipTM=0.199 tol=13.1
2024-12-11 15:14:56,849 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=43.8 pTM=0.334 ipTM=0.212 tol=11.1
2024-12-11 15:17:01,045 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=43.7 pTM=0.333 ipTM=0.211 tol=8.91
2024-12-11 15:19:05,149 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=43.8 pTM=0.333 ipTM=0.214 tol=8.52
2024-12-11 15:21:09,246 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=43.8 pTM=0.333 ipTM=0.214 tol=9.91
2024-12-11 15:23:13,331 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=43.8 pTM=0.333 ipTM=0.214 tol=7.83
2024-12-11 15:25:17,447 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=43.8 pTM=0.333 ipTM=0.215 tol=7.5
2024-12-11 15:27:21,564 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=43.8 pTM=0.332 ipTM=0.215 tol=7.41
2024-12-11 15:29:25,616 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=43.5 pTM=0.333 ipTM=0.216 tol=5.81
2024-12-11 15:31:29,674 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=43.7 pTM=0.333 ipTM=0.216 tol=9.41
2024-12-11 15:33:33,693 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=43.5 pTM=0.333 ipTM=0.216 tol=9.2
2024-12-11 15:35:37,806 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=43.6 pTM=0.332 ipTM=0.216 tol=8.99
2024-12-11 15:37:41,911 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=43.6 pTM=0.333 ipTM=0.215 tol=8.76
2024-12-11 15:39:45,979 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=43.7 pTM=0.332 ipTM=0.215 tol=7.43
2024-12-11 15:41:50,053 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=43.4 pTM=0.333 ipTM=0.214 tol=7.26
2024-12-11 15:43:54,154 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=43.6 pTM=0.333 ipTM=0.214 tol=6.64
2024-12-11 15:43:54,156 alphafold2_multimer_v3_model_2_seed_000 took 3850.3s (30 recycles)
2024-12-11 15:46:02,055 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=40.2 pTM=0.32 ipTM=0.213
2024-12-11 15:48:06,792 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=41.4 pTM=0.328 ipTM=0.236 tol=26.4
2024-12-11 15:50:11,496 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=41.2 pTM=0.328 ipTM=0.194 tol=17.6
2024-12-11 15:52:16,144 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.2 pTM=0.33 ipTM=0.205 tol=12.4
2024-12-11 15:54:20,796 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=40.7 pTM=0.331 ipTM=0.26 tol=11
2024-12-11 15:56:25,467 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=40.9 pTM=0.329 ipTM=0.197 tol=9.16
2024-12-11 15:58:30,146 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41.8 pTM=0.33 ipTM=0.208 tol=9.19
2024-12-11 16:00:34,849 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.9 pTM=0.329 ipTM=0.198 tol=6.88
2024-12-11 16:02:39,689 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.3 pTM=0.33 ipTM=0.198 tol=8.28
2024-12-11 16:04:44,482 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.1 pTM=0.33 ipTM=0.198 tol=7.05
2024-12-11 16:06:49,254 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41 pTM=0.329 ipTM=0.2 tol=9.01
2024-12-11 16:08:53,980 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.5 pTM=0.33 ipTM=0.199 tol=8.05
2024-12-11 16:10:58,642 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=42.2 pTM=0.331 ipTM=0.207 tol=14.5
2024-12-11 16:13:03,222 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=42 pTM=0.332 ipTM=0.207 tol=9
2024-12-11 16:15:07,847 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=42.2 pTM=0.332 ipTM=0.208 tol=8.26
2024-12-11 16:17:12,374 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=42.3 pTM=0.332 ipTM=0.209 tol=5.7
2024-12-11 16:19:16,919 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=42.2 pTM=0.333 ipTM=0.207 tol=6.07
2024-12-11 16:21:21,485 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=42.2 pTM=0.332 ipTM=0.207 tol=8.05
2024-12-11 16:23:26,044 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=41.8 pTM=0.332 ipTM=0.207 tol=8.66
2024-12-11 16:25:30,676 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=41.7 pTM=0.331 ipTM=0.206 tol=11.9
2024-12-11 16:27:35,348 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=41.7 pTM=0.33 ipTM=0.205 tol=12.9
2024-12-11 16:29:39,893 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=42 pTM=0.333 ipTM=0.208 tol=8.31
2024-12-11 16:31:44,411 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=41.7 pTM=0.333 ipTM=0.212 tol=5.65
2024-12-11 16:33:48,961 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=42.1 pTM=0.333 ipTM=0.209 tol=5.24
2024-12-11 16:35:53,443 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=41.3 pTM=0.333 ipTM=0.204 tol=6.83
2024-12-11 16:37:57,942 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=41.3 pTM=0.334 ipTM=0.211 tol=6.63
2024-12-11 16:40:02,407 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=42.2 pTM=0.334 ipTM=0.219 tol=5.36
2024-12-11 16:42:06,783 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=41.9 pTM=0.335 ipTM=0.213 tol=9.22
2024-12-11 16:44:11,222 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41.3 pTM=0.334 ipTM=0.205 tol=9.39
2024-12-11 16:46:15,691 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=42.1 pTM=0.334 ipTM=0.211 tol=8.5
2024-12-11 16:48:20,168 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=41.5 pTM=0.335 ipTM=0.214 tol=8.7
2024-12-11 16:48:20,171 alphafold2_multimer_v3_model_3_seed_000 took 3862.6s (30 recycles)
2024-12-11 16:50:28,674 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=39.2 pTM=0.315 ipTM=0.191
2024-12-11 16:52:33,903 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=39.4 pTM=0.321 ipTM=0.191 tol=26.9
2024-12-11 16:54:39,329 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=39.5 pTM=0.323 ipTM=0.205 tol=18.3
2024-12-11 16:56:44,818 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=39.1 pTM=0.324 ipTM=0.206 tol=20
2024-12-11 16:58:50,272 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=39.3 pTM=0.326 ipTM=0.21 tol=14.9
2024-12-11 17:00:55,399 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=39 pTM=0.324 ipTM=0.213 tol=16.2
2024-12-11 17:03:00,530 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=39.4 pTM=0.325 ipTM=0.204 tol=11.2
2024-12-11 17:05:05,655 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=39.2 pTM=0.324 ipTM=0.206 tol=12.6
2024-12-11 17:07:10,749 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=39.8 pTM=0.327 ipTM=0.206 tol=14
2024-12-11 17:09:15,759 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=39.2 pTM=0.325 ipTM=0.209 tol=14
2024-12-11 17:11:20,780 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=39 pTM=0.324 ipTM=0.201 tol=13.7
2024-12-11 17:13:25,767 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=39.1 pTM=0.328 ipTM=0.207 tol=15.7
2024-12-11 17:15:30,786 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=38.7 pTM=0.326 ipTM=0.217 tol=13.3
2024-12-11 17:17:35,829 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=39.1 pTM=0.325 ipTM=0.203 tol=12.8
2024-12-11 17:19:40,884 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=39 pTM=0.326 ipTM=0.207 tol=14.3
2024-12-11 17:21:45,967 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=39.5 pTM=0.326 ipTM=0.203 tol=15.5
2024-12-11 17:23:51,240 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=39.2 pTM=0.323 ipTM=0.204 tol=13.6
2024-12-11 17:25:56,334 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=39.2 pTM=0.326 ipTM=0.204 tol=11.3
2024-12-11 17:28:01,314 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=39.1 pTM=0.325 ipTM=0.208 tol=10.6
2024-12-11 17:30:06,386 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=39.6 pTM=0.326 ipTM=0.205 tol=9.3
2024-12-11 17:32:11,567 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=39.3 pTM=0.326 ipTM=0.212 tol=9.41
2024-12-11 17:34:16,714 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=39.6 pTM=0.326 ipTM=0.209 tol=11.1
2024-12-11 17:36:21,839 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=39.3 pTM=0.323 ipTM=0.208 tol=8.55
2024-12-11 17:38:27,111 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=39.6 pTM=0.326 ipTM=0.211 tol=9.05
2024-12-11 17:40:32,487 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=39.4 pTM=0.323 ipTM=0.207 tol=11.9
2024-12-11 17:42:37,709 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=39.4 pTM=0.324 ipTM=0.208 tol=11.6
2024-12-11 17:44:42,879 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=39.4 pTM=0.324 ipTM=0.21 tol=11.7
2024-12-11 17:46:47,929 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=39.6 pTM=0.325 ipTM=0.207 tol=13.6
2024-12-11 17:48:53,035 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=39.2 pTM=0.324 ipTM=0.216 tol=10.5
2024-12-11 17:50:58,082 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=39.3 pTM=0.323 ipTM=0.206 tol=10.5
2024-12-11 17:53:03,055 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=39.3 pTM=0.323 ipTM=0.205 tol=12.2
2024-12-11 17:53:03,058 alphafold2_multimer_v3_model_4_seed_000 took 3879.5s (30 recycles)
2024-12-11 17:55:11,497 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=39.3 pTM=0.316 ipTM=0.182
2024-12-11 17:57:16,641 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=40.5 pTM=0.325 ipTM=0.188 tol=27.6
2024-12-11 17:59:21,698 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=40.6 pTM=0.323 ipTM=0.192 tol=19
2024-12-11 18:01:26,886 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=40.6 pTM=0.325 ipTM=0.196 tol=18.7
2024-12-11 18:03:32,189 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=40.7 pTM=0.325 ipTM=0.205 tol=13.8
2024-12-11 18:05:37,436 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=40.9 pTM=0.326 ipTM=0.21 tol=12.3
2024-12-11 18:07:42,584 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=41.9 pTM=0.325 ipTM=0.212 tol=13.5
2024-12-11 18:09:47,717 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.9 pTM=0.325 ipTM=0.213 tol=7.85
2024-12-11 18:11:52,849 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=41.9 pTM=0.326 ipTM=0.214 tol=8.48
2024-12-11 18:13:58,091 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=42 pTM=0.327 ipTM=0.213 tol=7.59
2024-12-11 18:16:03,218 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=41.9 pTM=0.327 ipTM=0.213 tol=10.2
2024-12-11 18:18:08,198 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=41.5 pTM=0.327 ipTM=0.215 tol=7.69
2024-12-11 18:20:13,246 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=41.5 pTM=0.327 ipTM=0.214 tol=12.3
2024-12-11 18:22:18,386 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41.8 pTM=0.327 ipTM=0.212 tol=10.6
2024-12-11 18:24:23,397 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.6 pTM=0.327 ipTM=0.212 tol=12.8
2024-12-11 18:26:28,188 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=41.6 pTM=0.326 ipTM=0.212 tol=10.4
2024-12-11 18:28:33,011 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42 pTM=0.327 ipTM=0.213 tol=8.95
2024-12-11 18:30:37,925 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.1 pTM=0.326 ipTM=0.215 tol=7.44
2024-12-11 18:32:42,887 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=41.8 pTM=0.327 ipTM=0.214 tol=7.05
2024-12-11 18:34:47,872 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=41.8 pTM=0.327 ipTM=0.215 tol=6.13
2024-12-11 18:36:52,885 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=42.1 pTM=0.328 ipTM=0.215 tol=14.5
2024-12-11 18:38:57,801 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=41.8 pTM=0.327 ipTM=0.214 tol=14.3
2024-12-11 18:41:02,533 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=41.9 pTM=0.326 ipTM=0.215 tol=6.45
2024-12-11 18:43:07,261 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=41.8 pTM=0.327 ipTM=0.214 tol=9.84
2024-12-11 18:45:12,106 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=41.8 pTM=0.326 ipTM=0.212 tol=10.9
2024-12-11 18:47:16,854 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=41.7 pTM=0.327 ipTM=0.213 tol=11.5
2024-12-11 18:49:21,631 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=41.9 pTM=0.326 ipTM=0.214 tol=12
2024-12-11 18:51:26,641 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=42 pTM=0.327 ipTM=0.212 tol=12.4
2024-12-11 18:53:31,637 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=41.9 pTM=0.326 ipTM=0.212 tol=11.5
2024-12-11 18:55:36,525 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=41.8 pTM=0.327 ipTM=0.211 tol=10.4
2024-12-11 18:57:41,480 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=41.9 pTM=0.327 ipTM=0.211 tol=10.4
2024-12-11 18:57:41,483 alphafold2_multimer_v3_model_5_seed_000 took 3875.0s (30 recycles)
2024-12-11 18:57:44,883 reranking models by 'multimer' metric
2024-12-11 18:57:50,230 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-11 19:05:04,491 Relaxation took 439.6s
2024-12-11 19:05:04,514 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=42.8 pTM=0.331 ipTM=0.217
2024-12-11 19:16:36,440 Relaxation took 691.9s
2024-12-11 19:16:36,456 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=41.5 pTM=0.335 ipTM=0.214
2024-12-11 19:24:21,372 Relaxation took 464.9s
2024-12-11 19:24:21,373 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=43.6 pTM=0.333 ipTM=0.214
2024-12-11 19:33:41,797 Relaxation took 560.4s
2024-12-11 19:33:41,798 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=41.9 pTM=0.327 ipTM=0.211
2024-12-11 19:45:20,351 Relaxation took 698.6s
2024-12-11 19:45:20,373 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=39.3 pTM=0.323 ipTM=0.205
2024-12-11 19:45:26,844 Done