2024-12-04 16:34:46,155 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-04 16:34:47,905 Running on GPU 2024-12-04 16:34:52,482 Found 6 citations for tools or databases 2024-12-04 16:34:52,482 Query 1/1: ANAPC1_CXorf66 (length 2305) 2024-12-04 16:34:52,864 Sleeping for 5s. Reason: PENDING 2024-12-04 16:34:58,119 Sleeping for 10s. Reason: PENDING 2024-12-04 16:35:08,384 Sleeping for 10s. Reason: PENDING 2024-12-04 16:35:18,654 Sleeping for 7s. Reason: PENDING 2024-12-04 16:35:25,909 Sleeping for 6s. Reason: PENDING 2024-12-04 16:35:32,168 Sleeping for 6s. Reason: PENDING 2024-12-04 16:35:38,426 Sleeping for 10s. Reason: PENDING 2024-12-04 16:35:48,684 Sleeping for 7s. Reason: PENDING 2024-12-04 16:35:55,940 Sleeping for 5s. Reason: PENDING 2024-12-04 16:36:01,197 Sleeping for 7s. Reason: PENDING 2024-12-04 16:36:08,455 Sleeping for 7s. Reason: PENDING 2024-12-04 16:36:15,710 Sleeping for 9s. Reason: PENDING 2024-12-04 16:36:24,966 Sleeping for 9s. Reason: PENDING 2024-12-04 16:36:34,221 Sleeping for 8s. Reason: PENDING 2024-12-04 16:36:42,482 Sleeping for 10s. Reason: PENDING 2024-12-04 16:36:52,743 Sleeping for 6s. Reason: PENDING 2024-12-04 16:36:59,005 Sleeping for 6s. Reason: PENDING 2024-12-04 16:37:05,265 Sleeping for 9s. Reason: PENDING 2024-12-04 16:37:14,528 Sleeping for 10s. Reason: PENDING 2024-12-04 16:37:24,785 Sleeping for 6s. Reason: PENDING 2024-12-04 16:37:31,036 Sleeping for 5s. Reason: PENDING 2024-12-04 16:37:36,291 Sleeping for 6s. Reason: PENDING 2024-12-04 16:37:42,545 Sleeping for 7s. Reason: PENDING 2024-12-04 16:37:49,798 Sleeping for 10s. Reason: PENDING 2024-12-04 16:38:00,064 Sleeping for 9s. Reason: PENDING 2024-12-04 16:38:09,325 Sleeping for 10s. Reason: PENDING 2024-12-04 16:38:19,581 Sleeping for 6s. Reason: PENDING 2024-12-04 16:38:25,837 Sleeping for 9s. Reason: PENDING 2024-12-04 16:38:35,091 Sleeping for 6s. Reason: PENDING 2024-12-04 16:38:41,368 Sleeping for 10s. Reason: PENDING 2024-12-04 16:38:51,624 Sleeping for 9s. Reason: PENDING 2024-12-04 16:39:00,883 Sleeping for 6s. Reason: PENDING 2024-12-04 16:39:07,140 Sleeping for 5s. Reason: PENDING 2024-12-04 16:39:12,392 Sleeping for 9s. Reason: PENDING 2024-12-04 16:39:21,660 Sleeping for 6s. Reason: PENDING 2024-12-04 16:39:27,924 Sleeping for 7s. Reason: PENDING 2024-12-04 16:39:35,179 Sleeping for 5s. Reason: PENDING 2024-12-04 16:39:40,437 Sleeping for 9s. Reason: PENDING 2024-12-04 16:39:49,699 Sleeping for 8s. Reason: PENDING 2024-12-04 16:39:57,954 Sleeping for 5s. Reason: PENDING 2024-12-04 16:40:03,208 Sleeping for 10s. Reason: PENDING 2024-12-04 16:40:13,467 Sleeping for 6s. Reason: PENDING 2024-12-04 16:40:19,721 Sleeping for 6s. Reason: RUNNING 2024-12-04 16:40:25,974 Sleeping for 10s. Reason: RUNNING 2024-12-04 16:40:36,237 Sleeping for 9s. Reason: RUNNING 2024-12-04 16:40:45,496 Sleeping for 10s. Reason: RUNNING 2024-12-04 16:40:55,753 Sleeping for 8s. Reason: RUNNING 2024-12-04 16:41:04,156 Sleeping for 5s. Reason: RUNNING 2024-12-04 16:41:09,409 Sleeping for 7s. Reason: RUNNING 2024-12-04 16:41:16,665 Sleeping for 10s. Reason: RUNNING 2024-12-04 16:41:26,922 Sleeping for 7s. Reason: RUNNING 2024-12-04 16:41:34,178 Sleeping for 10s. Reason: RUNNING 2024-12-04 16:41:44,436 Sleeping for 7s. Reason: RUNNING 2024-12-04 16:41:51,695 Sleeping for 5s. Reason: RUNNING 2024-12-04 16:41:56,947 Sleeping for 5s. Reason: RUNNING 2024-12-04 16:42:02,207 Sleeping for 9s. Reason: RUNNING 2024-12-04 16:42:11,469 Sleeping for 7s. Reason: RUNNING 2024-12-04 16:42:18,727 Sleeping for 10s. Reason: RUNNING 2024-12-04 16:42:28,988 Sleeping for 8s. Reason: RUNNING 2024-12-04 16:42:37,247 Sleeping for 9s. Reason: RUNNING 2024-12-04 16:42:46,502 Sleeping for 8s. Reason: RUNNING 2024-12-04 16:42:54,765 Sleeping for 10s. Reason: RUNNING 2024-12-04 16:43:05,024 Sleeping for 8s. Reason: RUNNING 2024-12-04 16:43:13,289 Sleeping for 10s. Reason: RUNNING 2024-12-04 16:43:23,549 Sleeping for 9s. Reason: RUNNING 2024-12-04 16:43:32,812 Sleeping for 5s. Reason: RUNNING 2024-12-04 16:43:38,064 Sleeping for 5s. Reason: RUNNING 2024-12-04 16:43:43,323 Sleeping for 9s. Reason: RUNNING 2024-12-04 16:43:52,589 Sleeping for 6s. Reason: RUNNING 2024-12-04 16:43:58,853 Sleeping for 10s. Reason: RUNNING 2024-12-04 16:44:09,115 Sleeping for 9s. Reason: RUNNING 2024-12-04 16:44:19,987 Sleeping for 10s. Reason: PENDING 2024-12-04 16:44:30,249 Sleeping for 6s. Reason: RUNNING 2024-12-04 16:44:36,508 Sleeping for 6s. Reason: RUNNING 2024-12-04 16:44:43,117 Sleeping for 7s. Reason: RUNNING 2024-12-04 16:44:50,376 Sleeping for 5s. Reason: RUNNING 2024-12-04 16:44:55,627 Sleeping for 7s. Reason: RUNNING 2024-12-04 16:45:02,891 Sleeping for 8s. Reason: RUNNING 2024-12-04 16:45:11,154 Sleeping for 5s. Reason: RUNNING 2024-12-04 16:45:16,406 Sleeping for 9s. Reason: RUNNING 2024-12-04 16:45:25,670 Sleeping for 5s. Reason: RUNNING 2024-12-04 16:45:30,931 Sleeping for 8s. Reason: RUNNING 2024-12-04 16:45:39,186 Sleeping for 7s. Reason: RUNNING 2024-12-04 16:45:46,442 Sleeping for 8s. Reason: RUNNING 2024-12-04 16:45:54,699 Sleeping for 6s. Reason: RUNNING 2024-12-04 16:46:00,954 Sleeping for 7s. Reason: RUNNING 2024-12-04 16:46:08,205 Sleeping for 10s. Reason: RUNNING 2024-12-04 16:46:18,491 Sleeping for 5s. Reason: RUNNING 2024-12-04 16:46:23,752 Sleeping for 10s. Reason: RUNNING 2024-12-04 16:46:36,166 Setting max_seq=508, max_extra_seq=1715 2024-12-04 16:53:39,780 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.4 pTM=0.631 ipTM=0.194 2024-12-04 16:57:32,172 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.9 pTM=0.631 ipTM=0.214 tol=10.9 2024-12-04 17:01:24,275 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.2 pTM=0.633 ipTM=0.21 tol=4.36 2024-12-04 17:05:16,441 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.5 pTM=0.633 ipTM=0.209 tol=2.77 2024-12-04 17:09:08,627 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.6 pTM=0.636 ipTM=0.207 tol=2.42 2024-12-04 17:13:00,822 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.6 pTM=0.635 ipTM=0.205 tol=3.12 2024-12-04 17:16:52,888 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.6 pTM=0.634 ipTM=0.204 tol=3.33 2024-12-04 17:20:45,035 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.6 pTM=0.636 ipTM=0.208 tol=2.11 2024-12-04 17:24:37,193 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.7 pTM=0.637 ipTM=0.205 tol=1.81 2024-12-04 17:28:29,316 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.6 pTM=0.633 ipTM=0.205 tol=1.85 2024-12-04 17:32:21,490 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.7 pTM=0.637 ipTM=0.204 tol=2.54 2024-12-04 17:36:13,707 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.7 pTM=0.637 ipTM=0.204 tol=2.03 2024-12-04 17:40:05,892 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.8 pTM=0.636 ipTM=0.205 tol=1.81 2024-12-04 17:43:57,984 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.8 pTM=0.637 ipTM=0.205 tol=2.66 2024-12-04 17:47:50,254 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.7 pTM=0.635 ipTM=0.204 tol=3.92 2024-12-04 17:51:42,493 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.7 pTM=0.636 ipTM=0.203 tol=2.93 2024-12-04 17:55:34,699 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.8 pTM=0.638 ipTM=0.203 tol=2.94 2024-12-04 17:59:26,882 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.6 pTM=0.634 ipTM=0.203 tol=3.4 2024-12-04 18:03:18,979 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.5 pTM=0.632 ipTM=0.203 tol=2.89 2024-12-04 18:07:11,139 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.7 pTM=0.635 ipTM=0.205 tol=3.46 2024-12-04 18:11:03,271 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.7 pTM=0.635 ipTM=0.203 tol=2.18 2024-12-04 18:14:55,337 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.8 pTM=0.636 ipTM=0.202 tol=3.12 2024-12-04 18:18:47,458 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.8 pTM=0.638 ipTM=0.207 tol=2.99 2024-12-04 18:22:39,711 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.6 pTM=0.635 ipTM=0.203 tol=1.46 2024-12-04 18:26:31,911 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.6 pTM=0.633 ipTM=0.202 tol=3.12 2024-12-04 18:30:24,109 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.6 pTM=0.634 ipTM=0.203 tol=1.04 2024-12-04 18:34:16,390 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.8 pTM=0.638 ipTM=0.205 tol=4.1 2024-12-04 18:38:08,647 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.6 pTM=0.637 ipTM=0.205 tol=1.61 2024-12-04 18:42:00,871 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.6 pTM=0.635 ipTM=0.202 tol=1.94 2024-12-04 18:45:53,059 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.5 pTM=0.633 ipTM=0.203 tol=1.67 2024-12-04 18:49:45,307 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.6 pTM=0.638 ipTM=0.202 tol=3.79 2024-12-04 18:49:45,310 alphafold2_multimer_v3_model_1_seed_000 took 7385.6s (30 recycles) 2024-12-04 18:53:40,834 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.2 pTM=0.632 ipTM=0.2 2024-12-04 18:57:33,248 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.7 pTM=0.631 ipTM=0.212 tol=7.38 2024-12-04 19:01:25,644 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.9 pTM=0.628 ipTM=0.213 tol=4.87 2024-12-04 19:05:18,051 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.1 pTM=0.627 ipTM=0.215 tol=4.17 2024-12-04 19:09:10,274 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.3 pTM=0.631 ipTM=0.215 tol=3.36 2024-12-04 19:13:02,603 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.4 pTM=0.631 ipTM=0.218 tol=2.63 2024-12-04 19:16:54,916 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.5 pTM=0.631 ipTM=0.218 tol=2.01 2024-12-04 19:20:47,327 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.6 pTM=0.632 ipTM=0.218 tol=2 2024-12-04 19:24:39,744 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.6 pTM=0.634 ipTM=0.221 tol=2.14 2024-12-04 19:28:32,115 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.6 pTM=0.63 ipTM=0.22 tol=2.37 2024-12-04 19:32:24,493 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.6 pTM=0.632 ipTM=0.22 tol=3.4 2024-12-04 19:36:16,877 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.8 pTM=0.637 ipTM=0.223 tol=3.35 2024-12-04 19:40:09,129 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.8 pTM=0.636 ipTM=0.221 tol=2.22 2024-12-04 19:44:01,486 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.8 pTM=0.636 ipTM=0.223 tol=1.96 2024-12-04 19:47:53,890 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.5 pTM=0.634 ipTM=0.225 tol=3.36 2024-12-04 19:51:46,305 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.7 pTM=0.639 ipTM=0.225 tol=3.78 2024-12-04 19:55:38,714 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.9 pTM=0.639 ipTM=0.225 tol=2.65 2024-12-04 19:59:30,992 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.8 pTM=0.637 ipTM=0.225 tol=1.99 2024-12-04 20:03:23,200 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.7 pTM=0.634 ipTM=0.224 tol=1.55 2024-12-04 20:07:15,590 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.9 pTM=0.637 ipTM=0.226 tol=2.59 2024-12-04 20:11:07,812 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.8 pTM=0.635 ipTM=0.223 tol=1.34 2024-12-04 20:15:00,112 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.8 pTM=0.636 ipTM=0.224 tol=1.04 2024-12-04 20:18:52,499 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.8 pTM=0.636 ipTM=0.222 tol=1.05 2024-12-04 20:22:44,887 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.8 pTM=0.635 ipTM=0.223 tol=1.22 2024-12-04 20:26:37,211 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.7 pTM=0.632 ipTM=0.222 tol=1.22 2024-12-04 20:30:29,576 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.6 pTM=0.632 ipTM=0.223 tol=2.52 2024-12-04 20:34:21,934 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.9 pTM=0.638 ipTM=0.225 tol=2.13 2024-12-04 20:38:14,158 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.8 pTM=0.637 ipTM=0.225 tol=1.93 2024-12-04 20:42:06,512 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.7 pTM=0.635 ipTM=0.225 tol=2.15 2024-12-04 20:45:58,852 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.6 pTM=0.634 ipTM=0.226 tol=2.3 2024-12-04 20:49:51,241 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.8 pTM=0.636 ipTM=0.226 tol=1.51 2024-12-04 20:49:51,244 alphafold2_multimer_v3_model_2_seed_000 took 7202.9s (30 recycles) 2024-12-04 20:53:46,940 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65 pTM=0.638 ipTM=0.191 2024-12-04 20:57:39,545 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.6 pTM=0.647 ipTM=0.195 tol=10.8 2024-12-04 21:01:32,086 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.2 pTM=0.659 ipTM=0.199 tol=6.33 2024-12-04 21:05:24,621 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.2 pTM=0.657 ipTM=0.202 tol=3.48 2024-12-04 21:09:17,213 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.2 pTM=0.659 ipTM=0.2 tol=3.92 2024-12-04 21:13:09,798 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.3 pTM=0.659 ipTM=0.201 tol=2.35 2024-12-04 21:17:02,370 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.3 pTM=0.657 ipTM=0.201 tol=2.46 2024-12-04 21:20:54,959 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.2 pTM=0.657 ipTM=0.2 tol=3.59 2024-12-04 21:24:47,530 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.5 pTM=0.662 ipTM=0.2 tol=2.61 2024-12-04 21:28:40,032 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.4 pTM=0.659 ipTM=0.203 tol=2.2 2024-12-04 21:32:32,480 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.4 pTM=0.662 ipTM=0.203 tol=2.71 2024-12-04 21:36:24,993 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.5 pTM=0.662 ipTM=0.204 tol=2.09 2024-12-04 21:40:17,465 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.4 pTM=0.66 ipTM=0.204 tol=2.79 2024-12-04 21:44:09,953 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.4 pTM=0.658 ipTM=0.204 tol=2.64 2024-12-04 21:48:02,295 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.4 pTM=0.659 ipTM=0.205 tol=2.76 2024-12-04 21:51:54,741 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66.4 pTM=0.659 ipTM=0.204 tol=2.46 2024-12-04 21:55:47,270 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.6 pTM=0.663 ipTM=0.205 tol=3 2024-12-04 21:59:39,592 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.4 pTM=0.66 ipTM=0.206 tol=2.59 2024-12-04 22:03:31,815 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.3 pTM=0.658 ipTM=0.204 tol=2.39 2024-12-04 22:07:24,202 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.4 pTM=0.661 ipTM=0.205 tol=2.12 2024-12-04 22:11:16,719 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.6 pTM=0.662 ipTM=0.204 tol=1.25 2024-12-04 22:15:09,238 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.4 pTM=0.659 ipTM=0.207 tol=2.25 2024-12-04 22:19:01,646 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.6 pTM=0.663 ipTM=0.208 tol=1.28 2024-12-04 22:22:54,042 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.6 pTM=0.661 ipTM=0.206 tol=1.5 2024-12-04 22:26:46,500 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.4 pTM=0.659 ipTM=0.206 tol=1.88 2024-12-04 22:30:38,994 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.3 pTM=0.659 ipTM=0.205 tol=1.4 2024-12-04 22:34:31,477 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.6 pTM=0.663 ipTM=0.204 tol=1.45 2024-12-04 22:38:23,917 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.4 pTM=0.661 ipTM=0.205 tol=1.31 2024-12-04 22:42:16,269 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.4 pTM=0.661 ipTM=0.205 tol=2.09 2024-12-04 22:46:08,593 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.3 pTM=0.657 ipTM=0.207 tol=1.93 2024-12-04 22:50:01,059 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.5 pTM=0.661 ipTM=0.205 tol=1.34 2024-12-04 22:50:01,063 alphafold2_multimer_v3_model_3_seed_000 took 7206.8s (30 recycles) 2024-12-04 22:53:56,938 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.6 pTM=0.659 ipTM=0.193 2024-12-04 22:57:49,442 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65 pTM=0.667 ipTM=0.216 tol=9.78 2024-12-04 23:01:41,977 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65 pTM=0.665 ipTM=0.228 tol=7.59 2024-12-04 23:05:34,507 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.9 pTM=0.662 ipTM=0.226 tol=3.66 2024-12-04 23:09:26,977 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.9 pTM=0.663 ipTM=0.224 tol=3.16 2024-12-04 23:13:19,481 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.1 pTM=0.663 ipTM=0.246 tol=3.31 2024-12-04 23:17:12,031 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.9 pTM=0.66 ipTM=0.268 tol=3.28 2024-12-04 23:21:04,624 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.9 pTM=0.658 ipTM=0.271 tol=3.28 2024-12-04 23:24:57,088 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.2 pTM=0.664 ipTM=0.273 tol=3.69 2024-12-04 23:28:49,575 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.2 pTM=0.662 ipTM=0.269 tol=4.46 2024-12-04 23:32:42,087 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.1 pTM=0.662 ipTM=0.272 tol=5.11 2024-12-04 23:36:34,656 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.1 pTM=0.663 ipTM=0.262 tol=2.28 2024-12-04 23:40:27,079 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.1 pTM=0.66 ipTM=0.262 tol=5.33 2024-12-04 23:44:19,514 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.9 pTM=0.661 ipTM=0.26 tol=4.13 2024-12-04 23:48:12,037 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.9 pTM=0.659 ipTM=0.265 tol=1.94 2024-12-04 23:52:04,544 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.1 pTM=0.661 ipTM=0.263 tol=1.9 2024-12-04 23:55:57,088 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.2 pTM=0.663 ipTM=0.26 tol=2.17 2024-12-04 23:59:49,525 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.1 pTM=0.664 ipTM=0.259 tol=4.58 2024-12-05 00:03:41,988 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65 pTM=0.661 ipTM=0.262 tol=4 2024-12-05 00:07:34,529 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.1 pTM=0.664 ipTM=0.267 tol=2.73 2024-12-05 00:11:27,076 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.2 pTM=0.665 ipTM=0.267 tol=4.38 2024-12-05 00:15:19,655 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.2 pTM=0.664 ipTM=0.262 tol=3.51 2024-12-05 00:19:12,176 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.2 pTM=0.664 ipTM=0.26 tol=4.42 2024-12-05 00:23:04,683 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.2 pTM=0.664 ipTM=0.263 tol=4.97 2024-12-05 00:26:57,142 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.2 pTM=0.661 ipTM=0.27 tol=4.2 2024-12-05 00:30:49,650 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.1 pTM=0.661 ipTM=0.26 tol=4.54 2024-12-05 00:34:42,097 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.2 pTM=0.664 ipTM=0.257 tol=2.05 2024-12-05 00:38:34,501 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.2 pTM=0.664 ipTM=0.266 tol=3.98 2024-12-05 00:42:27,035 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.1 pTM=0.664 ipTM=0.263 tol=1.67 2024-12-05 00:46:19,562 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.1 pTM=0.663 ipTM=0.27 tol=1.47 2024-12-05 00:50:12,101 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.2 pTM=0.663 ipTM=0.27 tol=1.2 2024-12-05 00:50:12,103 alphafold2_multimer_v3_model_4_seed_000 took 7208.0s (30 recycles) 2024-12-05 00:54:08,040 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.8 pTM=0.645 ipTM=0.192 2024-12-05 00:58:00,769 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.2 pTM=0.646 ipTM=0.197 tol=9.48 2024-12-05 01:01:53,491 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.4 pTM=0.648 ipTM=0.198 tol=3.23 2024-12-05 01:05:46,245 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.6 pTM=0.653 ipTM=0.198 tol=3.84 2024-12-05 01:09:38,901 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.8 pTM=0.655 ipTM=0.199 tol=3.41 2024-12-05 01:13:31,654 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.9 pTM=0.657 ipTM=0.198 tol=3.54 2024-12-05 01:17:24,287 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.9 pTM=0.658 ipTM=0.199 tol=2.87 2024-12-05 01:21:16,981 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.8 pTM=0.659 ipTM=0.199 tol=3.44 2024-12-05 01:25:09,721 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.9 pTM=0.661 ipTM=0.2 tol=3.38 2024-12-05 01:29:02,329 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.9 pTM=0.659 ipTM=0.201 tol=2.77 2024-12-05 01:32:54,918 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.9 pTM=0.661 ipTM=0.202 tol=7 2024-12-05 01:36:47,543 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.9 pTM=0.661 ipTM=0.203 tol=2.62 2024-12-05 01:40:40,167 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66 pTM=0.659 ipTM=0.203 tol=6.55 2024-12-05 01:44:32,914 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66 pTM=0.661 ipTM=0.202 tol=2.68 2024-12-05 01:48:25,626 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.9 pTM=0.659 ipTM=0.203 tol=2.7 2024-12-05 01:52:18,199 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.9 pTM=0.661 ipTM=0.204 tol=2.69 2024-12-05 01:56:10,706 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66 pTM=0.662 ipTM=0.204 tol=6.89 2024-12-05 02:00:03,336 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.9 pTM=0.662 ipTM=0.203 tol=3.81 2024-12-05 02:03:55,970 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.9 pTM=0.659 ipTM=0.206 tol=7.41 2024-12-05 02:07:48,622 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66 pTM=0.661 ipTM=0.204 tol=6.58 2024-12-05 02:11:41,158 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.9 pTM=0.661 ipTM=0.205 tol=3.24 2024-12-05 02:15:33,726 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.9 pTM=0.66 ipTM=0.205 tol=7.18 2024-12-05 02:19:26,290 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.1 pTM=0.661 ipTM=0.204 tol=6.79 2024-12-05 02:23:18,813 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66 pTM=0.661 ipTM=0.206 tol=5.64 2024-12-05 02:27:11,453 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.9 pTM=0.66 ipTM=0.205 tol=3.54 2024-12-05 02:31:04,053 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.9 pTM=0.659 ipTM=0.207 tol=3.1 2024-12-05 02:34:56,580 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.1 pTM=0.663 ipTM=0.207 tol=3.16 2024-12-05 02:38:49,107 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66 pTM=0.662 ipTM=0.209 tol=5.55 2024-12-05 02:42:41,695 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.9 pTM=0.662 ipTM=0.209 tol=5.55 2024-12-05 02:46:34,329 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66 pTM=0.66 ipTM=0.21 tol=6.5 2024-12-05 02:50:26,950 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66 pTM=0.661 ipTM=0.208 tol=3.4 2024-12-05 02:50:26,953 alphafold2_multimer_v3_model_5_seed_000 took 7211.8s (30 recycles) 2024-12-05 02:50:29,984 reranking models by 'multimer' metric 2024-12-05 02:50:33,368 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-05 02:57:56,316 Relaxation took 446.3s 2024-12-05 02:57:56,317 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.2 pTM=0.663 ipTM=0.27 2024-12-05 03:25:11,784 Relaxation took 1635.5s 2024-12-05 03:25:11,784 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.8 pTM=0.636 ipTM=0.226 2024-12-05 03:30:19,437 Relaxation took 307.7s 2024-12-05 03:30:19,437 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66 pTM=0.661 ipTM=0.208 2024-12-05 03:35:02,632 Relaxation took 283.2s 2024-12-05 03:35:02,633 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.5 pTM=0.661 ipTM=0.205 2024-12-05 03:40:03,436 Relaxation took 300.8s 2024-12-05 03:40:03,436 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.6 pTM=0.638 ipTM=0.202 2024-12-05 03:40:10,586 Done