2024-12-04 17:35:14,381 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-04 17:35:14,698 Running on GPU 2024-12-04 17:35:18,468 Found 6 citations for tools or databases 2024-12-04 17:35:18,468 Query 1/1: ANAPC4_C11orf51 (length 929) 2024-12-04 17:35:18,767 Sleeping for 6s. Reason: PENDING 2024-12-04 17:35:25,030 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:35:35,288 Sleeping for 5s. Reason: RUNNING 2024-12-04 17:35:40,546 Sleeping for 5s. Reason: RUNNING 2024-12-04 17:35:45,802 Sleeping for 7s. Reason: RUNNING 2024-12-04 17:35:53,066 Sleeping for 9s. Reason: RUNNING 2024-12-04 17:36:02,366 Sleeping for 7s. Reason: RUNNING 2024-12-04 17:36:09,627 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:36:19,889 Sleeping for 7s. Reason: RUNNING 2024-12-04 17:36:27,146 Sleeping for 8s. Reason: RUNNING 2024-12-04 17:36:35,404 Sleeping for 7s. Reason: RUNNING 2024-12-04 17:36:42,657 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:36:52,921 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:37:04,009 Sleeping for 8s. Reason: PENDING 2024-12-04 17:37:12,263 Sleeping for 5s. Reason: RUNNING 2024-12-04 17:37:17,528 Sleeping for 8s. Reason: RUNNING 2024-12-04 17:37:25,785 Sleeping for 6s. Reason: RUNNING 2024-12-04 17:37:32,043 Sleeping for 5s. Reason: RUNNING 2024-12-04 17:37:37,293 Sleeping for 9s. Reason: RUNNING 2024-12-04 17:37:46,552 Sleeping for 6s. Reason: RUNNING 2024-12-04 17:37:52,808 Sleeping for 9s. Reason: RUNNING 2024-12-04 17:38:02,064 Sleeping for 6s. Reason: RUNNING 2024-12-04 17:38:08,316 Sleeping for 7s. Reason: RUNNING 2024-12-04 17:38:15,576 Sleeping for 6s. Reason: RUNNING 2024-12-04 17:38:23,265 Setting max_seq=508, max_extra_seq=2048 2024-12-04 17:41:29,253 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.1 pTM=0.708 ipTM=0.171 2024-12-04 17:41:48,413 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.1 pTM=0.717 ipTM=0.186 tol=5.99 2024-12-04 17:42:07,629 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.2 pTM=0.709 ipTM=0.179 tol=2.29 2024-12-04 17:42:26,883 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.5 pTM=0.708 ipTM=0.18 tol=2.29 2024-12-04 17:42:46,179 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.6 pTM=0.708 ipTM=0.177 tol=1.62 2024-12-04 17:43:05,507 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.1 pTM=0.711 ipTM=0.178 tol=2.28 2024-12-04 17:43:24,845 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.8 pTM=0.708 ipTM=0.177 tol=2.39 2024-12-04 17:43:44,206 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.8 pTM=0.707 ipTM=0.177 tol=1.58 2024-12-04 17:44:03,567 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.5 pTM=0.706 ipTM=0.18 tol=1.28 2024-12-04 17:44:22,944 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.8 pTM=0.709 ipTM=0.184 tol=2.88 2024-12-04 17:44:42,313 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.6 pTM=0.707 ipTM=0.183 tol=2.13 2024-12-04 17:45:01,685 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.8 pTM=0.71 ipTM=0.191 tol=1.45 2024-12-04 17:45:21,066 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.9 pTM=0.713 ipTM=0.187 tol=1.92 2024-12-04 17:45:40,428 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.6 pTM=0.709 ipTM=0.189 tol=1.71 2024-12-04 17:45:59,818 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70.9 pTM=0.711 ipTM=0.189 tol=1.16 2024-12-04 17:46:19,197 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.6 pTM=0.709 ipTM=0.191 tol=0.958 2024-12-04 17:46:38,589 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.9 pTM=0.71 ipTM=0.186 tol=0.99 2024-12-04 17:46:57,985 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.6 pTM=0.708 ipTM=0.188 tol=2.11 2024-12-04 17:47:17,387 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=70.8 pTM=0.707 ipTM=0.188 tol=0.928 2024-12-04 17:47:36,786 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.8 pTM=0.71 ipTM=0.193 tol=0.922 2024-12-04 17:47:56,181 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.4 pTM=0.707 ipTM=0.194 tol=0.681 2024-12-04 17:48:15,587 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.5 pTM=0.707 ipTM=0.191 tol=0.889 2024-12-04 17:48:34,999 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=70.9 pTM=0.71 ipTM=0.194 tol=1.52 2024-12-04 17:48:54,404 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.8 pTM=0.711 ipTM=0.197 tol=0.878 2024-12-04 17:49:13,797 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.8 pTM=0.711 ipTM=0.191 tol=2.04 2024-12-04 17:49:33,214 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.9 pTM=0.713 ipTM=0.188 tol=1.14 2024-12-04 17:49:52,612 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.8 pTM=0.708 ipTM=0.192 tol=1.73 2024-12-04 17:50:12,023 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.8 pTM=0.71 ipTM=0.185 tol=0.843 2024-12-04 17:50:31,435 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.6 pTM=0.708 ipTM=0.185 tol=1.17 2024-12-04 17:50:50,851 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70.6 pTM=0.708 ipTM=0.182 tol=1.6 2024-12-04 17:51:10,264 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.6 pTM=0.708 ipTM=0.184 tol=1.07 2024-12-04 17:51:10,265 alphafold2_multimer_v3_model_1_seed_000 took 760.9s (30 recycles) 2024-12-04 17:51:30,257 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.6 pTM=0.714 ipTM=0.183 2024-12-04 17:51:49,694 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.2 pTM=0.718 ipTM=0.196 tol=6.26 2024-12-04 17:52:09,112 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.5 pTM=0.71 ipTM=0.195 tol=3.11 2024-12-04 17:52:28,542 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71 pTM=0.71 ipTM=0.197 tol=2.87 2024-12-04 17:52:47,973 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.4 pTM=0.712 ipTM=0.191 tol=1.46 2024-12-04 17:53:07,415 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.2 pTM=0.708 ipTM=0.186 tol=4.88 2024-12-04 17:53:26,851 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.5 pTM=0.71 ipTM=0.193 tol=2.2 2024-12-04 17:53:46,280 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.2 pTM=0.706 ipTM=0.193 tol=2.09 2024-12-04 17:54:05,729 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.1 pTM=0.704 ipTM=0.175 tol=3.44 2024-12-04 17:54:25,167 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.4 pTM=0.707 ipTM=0.185 tol=1.85 2024-12-04 17:54:44,617 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.2 pTM=0.707 ipTM=0.192 tol=1.56 2024-12-04 17:55:04,068 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.4 pTM=0.709 ipTM=0.176 tol=3.89 2024-12-04 17:55:23,521 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.2 pTM=0.707 ipTM=0.18 tol=1.6 2024-12-04 17:55:42,961 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.2 pTM=0.706 ipTM=0.181 tol=0.971 2024-12-04 17:56:02,420 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.3 pTM=0.708 ipTM=0.181 tol=0.679 2024-12-04 17:56:21,853 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.1 pTM=0.705 ipTM=0.182 tol=1.05 2024-12-04 17:56:41,282 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.1 pTM=0.705 ipTM=0.182 tol=1.27 2024-12-04 17:57:00,709 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.8 pTM=0.703 ipTM=0.185 tol=0.61 2024-12-04 17:57:20,139 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.2 pTM=0.706 ipTM=0.187 tol=0.959 2024-12-04 17:57:39,581 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.2 pTM=0.708 ipTM=0.189 tol=1.27 2024-12-04 17:57:58,984 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.6 pTM=0.703 ipTM=0.189 tol=0.979 2024-12-04 17:58:18,403 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=70.8 pTM=0.704 ipTM=0.188 tol=1.16 2024-12-04 17:58:37,832 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.9 pTM=0.706 ipTM=0.19 tol=1.05 2024-12-04 17:58:57,257 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71 pTM=0.706 ipTM=0.189 tol=1.44 2024-12-04 17:59:16,670 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71 pTM=0.707 ipTM=0.194 tol=1.8 2024-12-04 17:59:36,078 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.1 pTM=0.708 ipTM=0.186 tol=2.01 2024-12-04 17:59:55,488 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71 pTM=0.704 ipTM=0.187 tol=1.86 2024-12-04 18:00:14,914 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=70.8 pTM=0.704 ipTM=0.194 tol=1.59 2024-12-04 18:00:34,327 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71 pTM=0.705 ipTM=0.189 tol=1.32 2024-12-04 18:00:53,759 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=70.8 pTM=0.706 ipTM=0.195 tol=1.29 2024-12-04 18:01:13,168 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71 pTM=0.705 ipTM=0.201 tol=1.94 2024-12-04 18:01:13,169 alphafold2_multimer_v3_model_2_seed_000 took 602.4s (30 recycles) 2024-12-04 18:01:33,176 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.1 pTM=0.711 ipTM=0.176 2024-12-04 18:01:52,623 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.8 pTM=0.713 ipTM=0.187 tol=7.05 2024-12-04 18:02:12,038 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.1 pTM=0.708 ipTM=0.205 tol=2.92 2024-12-04 18:02:31,484 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.6 pTM=0.709 ipTM=0.201 tol=3 2024-12-04 18:02:50,914 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.8 pTM=0.711 ipTM=0.217 tol=2.84 2024-12-04 18:03:10,368 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.2 pTM=0.715 ipTM=0.216 tol=1.97 2024-12-04 18:03:29,792 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.9 pTM=0.71 ipTM=0.217 tol=1.25 2024-12-04 18:03:49,218 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.9 pTM=0.711 ipTM=0.217 tol=0.922 2024-12-04 18:04:08,650 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.3 pTM=0.715 ipTM=0.224 tol=0.734 2024-12-04 18:04:28,071 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.1 pTM=0.713 ipTM=0.216 tol=2.39 2024-12-04 18:04:47,509 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.4 pTM=0.715 ipTM=0.215 tol=1.57 2024-12-04 18:05:06,946 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.3 pTM=0.714 ipTM=0.213 tol=0.931 2024-12-04 18:05:26,381 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.3 pTM=0.714 ipTM=0.216 tol=1.36 2024-12-04 18:05:45,819 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.3 pTM=0.715 ipTM=0.22 tol=0.7 2024-12-04 18:06:05,254 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.2 pTM=0.712 ipTM=0.219 tol=1.11 2024-12-04 18:06:24,681 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.9 pTM=0.71 ipTM=0.222 tol=1.08 2024-12-04 18:06:44,117 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.1 pTM=0.711 ipTM=0.216 tol=0.791 2024-12-04 18:07:03,545 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.6 pTM=0.709 ipTM=0.217 tol=0.712 2024-12-04 18:07:22,971 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.9 pTM=0.71 ipTM=0.218 tol=1.04 2024-12-04 18:07:42,374 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.9 pTM=0.712 ipTM=0.22 tol=1.24 2024-12-04 18:08:01,790 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.4 pTM=0.707 ipTM=0.219 tol=1.49 2024-12-04 18:08:21,203 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.5 pTM=0.708 ipTM=0.229 tol=1.54 2024-12-04 18:08:40,611 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.9 pTM=0.711 ipTM=0.226 tol=0.871 2024-12-04 18:09:00,030 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.9 pTM=0.711 ipTM=0.227 tol=1.01 2024-12-04 18:09:19,458 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.9 pTM=0.71 ipTM=0.22 tol=1.07 2024-12-04 18:09:38,893 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71 pTM=0.713 ipTM=0.221 tol=1.34 2024-12-04 18:09:58,322 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.8 pTM=0.708 ipTM=0.225 tol=1.56 2024-12-04 18:10:17,745 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.8 pTM=0.71 ipTM=0.231 tol=0.873 2024-12-04 18:10:37,166 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.8 pTM=0.711 ipTM=0.244 tol=0.765 2024-12-04 18:10:56,591 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.9 pTM=0.711 ipTM=0.239 tol=0.711 2024-12-04 18:11:16,012 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.9 pTM=0.71 ipTM=0.242 tol=1.12 2024-12-04 18:11:16,013 alphafold2_multimer_v3_model_3_seed_000 took 602.3s (30 recycles) 2024-12-04 18:11:36,010 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67.7 pTM=0.712 ipTM=0.184 2024-12-04 18:11:55,436 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.8 pTM=0.705 ipTM=0.185 tol=7.88 2024-12-04 18:12:14,858 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.3 pTM=0.704 ipTM=0.181 tol=3.78 2024-12-04 18:12:34,292 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.6 pTM=0.702 ipTM=0.181 tol=2.96 2024-12-04 18:12:53,723 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.1 pTM=0.704 ipTM=0.18 tol=1.39 2024-12-04 18:13:13,154 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.2 pTM=0.703 ipTM=0.181 tol=1.05 2024-12-04 18:13:32,576 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70 pTM=0.708 ipTM=0.176 tol=1.53 2024-12-04 18:13:51,987 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.6 pTM=0.706 ipTM=0.181 tol=1.96 2024-12-04 18:14:11,395 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.7 pTM=0.707 ipTM=0.181 tol=1.79 2024-12-04 18:14:30,804 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.9 pTM=0.706 ipTM=0.18 tol=2.38 2024-12-04 18:14:50,222 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.9 pTM=0.708 ipTM=0.178 tol=1.3 2024-12-04 18:15:09,639 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.8 pTM=0.705 ipTM=0.18 tol=1.49 2024-12-04 18:15:29,060 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.2 pTM=0.711 ipTM=0.184 tol=1.61 2024-12-04 18:15:48,490 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.9 pTM=0.707 ipTM=0.186 tol=1.23 2024-12-04 18:16:07,908 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.7 pTM=0.706 ipTM=0.181 tol=1.82 2024-12-04 18:16:27,342 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.4 pTM=0.705 ipTM=0.181 tol=1.23 2024-12-04 18:16:46,779 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.8 pTM=0.707 ipTM=0.181 tol=1.75 2024-12-04 18:17:06,216 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.8 pTM=0.706 ipTM=0.178 tol=1.52 2024-12-04 18:17:25,650 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.6 pTM=0.704 ipTM=0.182 tol=1.69 2024-12-04 18:17:45,087 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.8 pTM=0.707 ipTM=0.182 tol=1.83 2024-12-04 18:18:04,502 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.2 pTM=0.703 ipTM=0.187 tol=1.7 2024-12-04 18:18:23,920 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.5 pTM=0.704 ipTM=0.182 tol=1.86 2024-12-04 18:18:43,342 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.4 pTM=0.705 ipTM=0.184 tol=2.91 2024-12-04 18:19:02,765 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.9 pTM=0.708 ipTM=0.181 tol=1.88 2024-12-04 18:19:22,181 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.6 pTM=0.706 ipTM=0.186 tol=1.27 2024-12-04 18:19:41,615 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.8 pTM=0.707 ipTM=0.179 tol=1.65 2024-12-04 18:20:01,034 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.7 pTM=0.705 ipTM=0.18 tol=1.91 2024-12-04 18:20:20,464 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.9 pTM=0.707 ipTM=0.177 tol=1.79 2024-12-04 18:20:39,895 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.9 pTM=0.707 ipTM=0.188 tol=1.23 2024-12-04 18:20:59,327 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.9 pTM=0.705 ipTM=0.178 tol=1.7 2024-12-04 18:21:18,738 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.8 pTM=0.705 ipTM=0.182 tol=1.51 2024-12-04 18:21:18,738 alphafold2_multimer_v3_model_4_seed_000 took 602.2s (30 recycles) 2024-12-04 18:21:38,781 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.2 pTM=0.709 ipTM=0.147 2024-12-04 18:21:58,252 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69 pTM=0.706 ipTM=0.142 tol=5.06 2024-12-04 18:22:17,718 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.7 pTM=0.708 ipTM=0.152 tol=3.73 2024-12-04 18:22:37,198 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70.2 pTM=0.712 ipTM=0.154 tol=3.96 2024-12-04 18:22:56,655 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.4 pTM=0.712 ipTM=0.153 tol=4.25 2024-12-04 18:23:16,117 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.5 pTM=0.713 ipTM=0.152 tol=2.1 2024-12-04 18:23:35,575 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.4 pTM=0.712 ipTM=0.151 tol=1.71 2024-12-04 18:23:55,023 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.4 pTM=0.711 ipTM=0.153 tol=1.62 2024-12-04 18:24:14,489 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.6 pTM=0.713 ipTM=0.151 tol=1.71 2024-12-04 18:24:33,958 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.6 pTM=0.713 ipTM=0.151 tol=1.89 2024-12-04 18:24:53,439 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.8 pTM=0.715 ipTM=0.151 tol=2.65 2024-12-04 18:25:12,906 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.6 pTM=0.711 ipTM=0.148 tol=2.49 2024-12-04 18:25:32,372 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.8 pTM=0.715 ipTM=0.149 tol=2.43 2024-12-04 18:25:51,851 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.8 pTM=0.714 ipTM=0.15 tol=1.09 2024-12-04 18:26:11,332 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.8 pTM=0.713 ipTM=0.145 tol=2.04 2024-12-04 18:26:30,793 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.4 pTM=0.711 ipTM=0.145 tol=4.71 2024-12-04 18:26:50,247 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.4 pTM=0.712 ipTM=0.149 tol=2.37 2024-12-04 18:27:09,699 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.5 pTM=0.712 ipTM=0.15 tol=3.43 2024-12-04 18:27:29,151 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.7 pTM=0.714 ipTM=0.154 tol=2.87 2024-12-04 18:27:48,596 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.6 pTM=0.714 ipTM=0.15 tol=3.75 2024-12-04 18:28:08,031 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.3 pTM=0.709 ipTM=0.151 tol=1.61 2024-12-04 18:28:27,471 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.3 pTM=0.709 ipTM=0.153 tol=3.25 2024-12-04 18:28:46,930 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.6 pTM=0.712 ipTM=0.152 tol=1.87 2024-12-04 18:29:06,389 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.4 pTM=0.712 ipTM=0.146 tol=3.34 2024-12-04 18:29:25,852 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.6 pTM=0.714 ipTM=0.145 tol=2.64 2024-12-04 18:29:45,309 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.2 pTM=0.712 ipTM=0.145 tol=2.7 2024-12-04 18:30:04,755 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.4 pTM=0.711 ipTM=0.15 tol=2.18 2024-12-04 18:30:24,186 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.4 pTM=0.712 ipTM=0.15 tol=1.93 2024-12-04 18:30:43,630 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.6 pTM=0.711 ipTM=0.156 tol=2.66 2024-12-04 18:31:03,066 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.4 pTM=0.711 ipTM=0.155 tol=1.55 2024-12-04 18:31:22,524 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.6 pTM=0.712 ipTM=0.155 tol=3.88 2024-12-04 18:31:22,525 alphafold2_multimer_v3_model_5_seed_000 took 603.2s (30 recycles) 2024-12-04 18:31:23,057 reranking models by 'multimer' metric 2024-12-04 18:31:24,294 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-04 18:32:35,377 Relaxation took 72.3s 2024-12-04 18:32:35,378 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.9 pTM=0.71 ipTM=0.242 2024-12-04 18:33:45,181 Relaxation took 69.8s 2024-12-04 18:33:45,181 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71 pTM=0.705 ipTM=0.201 2024-12-04 18:34:47,474 Relaxation took 62.3s 2024-12-04 18:34:47,475 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.6 pTM=0.708 ipTM=0.184 2024-12-04 18:35:40,384 Relaxation took 52.9s 2024-12-04 18:35:40,384 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.8 pTM=0.705 ipTM=0.182 2024-12-04 18:36:38,819 Relaxation took 58.4s 2024-12-04 18:36:38,819 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.6 pTM=0.712 ipTM=0.155 2024-12-04 18:36:40,613 Done