2024-12-04 17:38:40,684 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-04 17:38:41,019 Running on GPU 2024-12-04 17:38:45,861 Found 6 citations for tools or databases 2024-12-04 17:38:45,861 Query 1/1: ANAPC4_MAGIX (length 1142) 2024-12-04 17:38:46,143 Sleeping for 5s. Reason: PENDING 2024-12-04 17:38:51,402 Sleeping for 8s. Reason: RUNNING 2024-12-04 17:38:59,661 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:39:09,925 Sleeping for 7s. Reason: RUNNING 2024-12-04 17:39:17,180 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:39:27,444 Sleeping for 6s. Reason: RUNNING 2024-12-04 17:39:33,699 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:39:43,967 Sleeping for 5s. Reason: RUNNING 2024-12-04 17:39:49,221 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:39:59,488 Sleeping for 9s. Reason: RUNNING 2024-12-04 17:40:08,749 Sleeping for 9s. Reason: RUNNING 2024-12-04 17:40:18,008 Sleeping for 7s. Reason: RUNNING 2024-12-04 17:40:25,267 Sleeping for 8s. Reason: RUNNING 2024-12-04 17:40:33,522 Sleeping for 8s. Reason: RUNNING 2024-12-04 17:40:41,777 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:40:52,038 Sleeping for 8s. Reason: RUNNING 2024-12-04 17:41:00,300 Sleeping for 5s. Reason: RUNNING 2024-12-04 17:41:05,550 Sleeping for 6s. Reason: RUNNING 2024-12-04 17:41:11,811 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:41:22,067 Sleeping for 6s. Reason: RUNNING 2024-12-04 17:41:28,327 Sleeping for 7s. Reason: RUNNING 2024-12-04 17:41:35,582 Sleeping for 7s. Reason: RUNNING 2024-12-04 17:41:42,838 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:41:53,093 Sleeping for 8s. Reason: RUNNING 2024-12-04 17:42:02,826 Sleeping for 9s. Reason: PENDING 2024-12-04 17:42:12,075 Sleeping for 9s. Reason: RUNNING 2024-12-04 17:42:21,336 Sleeping for 8s. Reason: RUNNING 2024-12-04 17:42:29,592 Sleeping for 7s. Reason: RUNNING 2024-12-04 17:42:36,859 Sleeping for 9s. Reason: RUNNING 2024-12-04 17:42:46,113 Sleeping for 6s. Reason: RUNNING 2024-12-04 17:42:52,375 Sleeping for 8s. Reason: RUNNING 2024-12-04 17:43:00,629 Sleeping for 10s. Reason: RUNNING 2024-12-04 17:43:10,887 Sleeping for 9s. Reason: RUNNING 2024-12-04 17:43:20,147 Sleeping for 9s. Reason: RUNNING 2024-12-04 17:43:31,574 Setting max_seq=508, max_extra_seq=2048 2024-12-04 17:46:28,303 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.9 pTM=0.602 ipTM=0.155 2024-12-04 17:46:58,016 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.2 pTM=0.604 ipTM=0.149 tol=10.1 2024-12-04 17:47:27,864 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.2 pTM=0.602 ipTM=0.156 tol=6.21 2024-12-04 17:47:57,802 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.2 pTM=0.603 ipTM=0.149 tol=3.88 2024-12-04 17:48:27,822 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.2 pTM=0.602 ipTM=0.16 tol=3.38 2024-12-04 17:48:57,852 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.3 pTM=0.603 ipTM=0.154 tol=2.99 2024-12-04 17:49:27,940 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.8 pTM=0.605 ipTM=0.154 tol=2.92 2024-12-04 17:49:58,037 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.2 pTM=0.602 ipTM=0.155 tol=2.27 2024-12-04 17:50:28,171 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=63.5 pTM=0.603 ipTM=0.157 tol=2.78 2024-12-04 17:50:58,304 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.4 pTM=0.603 ipTM=0.156 tol=3.16 2024-12-04 17:51:28,454 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.5 pTM=0.604 ipTM=0.157 tol=2.9 2024-12-04 17:51:58,598 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.3 pTM=0.602 ipTM=0.159 tol=3.56 2024-12-04 17:52:28,740 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.9 pTM=0.606 ipTM=0.158 tol=1.79 2024-12-04 17:52:58,895 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.7 pTM=0.605 ipTM=0.158 tol=1.25 2024-12-04 17:53:29,047 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64 pTM=0.606 ipTM=0.161 tol=2.66 2024-12-04 17:53:59,195 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.9 pTM=0.606 ipTM=0.162 tol=1.14 2024-12-04 17:54:29,357 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.2 pTM=0.609 ipTM=0.162 tol=2.67 2024-12-04 17:54:59,490 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.9 pTM=0.606 ipTM=0.161 tol=2.42 2024-12-04 17:55:29,625 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.7 pTM=0.604 ipTM=0.162 tol=1.37 2024-12-04 17:55:59,775 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.8 pTM=0.605 ipTM=0.159 tol=1.78 2024-12-04 17:56:29,936 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.8 pTM=0.604 ipTM=0.159 tol=2 2024-12-04 17:57:00,061 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.5 pTM=0.604 ipTM=0.16 tol=1.3 2024-12-04 17:57:30,193 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.6 pTM=0.604 ipTM=0.161 tol=1.14 2024-12-04 17:58:00,321 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.9 pTM=0.605 ipTM=0.159 tol=1.32 2024-12-04 17:58:30,470 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.7 pTM=0.604 ipTM=0.162 tol=1.09 2024-12-04 17:59:00,579 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.5 pTM=0.604 ipTM=0.16 tol=1.54 2024-12-04 17:59:30,717 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.7 pTM=0.605 ipTM=0.161 tol=1.7 2024-12-04 18:00:00,820 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.3 pTM=0.604 ipTM=0.16 tol=1.2 2024-12-04 18:00:30,924 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.6 pTM=0.604 ipTM=0.162 tol=1.98 2024-12-04 18:01:01,034 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.5 pTM=0.604 ipTM=0.161 tol=1.34 2024-12-04 18:01:31,145 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.6 pTM=0.604 ipTM=0.163 tol=1.25 2024-12-04 18:01:31,146 alphafold2_multimer_v3_model_1_seed_000 took 1073.8s (30 recycles) 2024-12-04 18:02:02,100 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.8 pTM=0.609 ipTM=0.151 2024-12-04 18:02:32,248 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.8 pTM=0.61 ipTM=0.149 tol=10.7 2024-12-04 18:03:02,416 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.9 pTM=0.604 ipTM=0.15 tol=4.88 2024-12-04 18:03:32,590 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.2 pTM=0.605 ipTM=0.148 tol=2.92 2024-12-04 18:04:02,782 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.1 pTM=0.603 ipTM=0.148 tol=2.64 2024-12-04 18:04:32,978 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.4 pTM=0.606 ipTM=0.148 tol=2.24 2024-12-04 18:05:03,160 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.6 pTM=0.608 ipTM=0.147 tol=1.59 2024-12-04 18:05:33,351 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.6 pTM=0.606 ipTM=0.145 tol=2.11 2024-12-04 18:06:03,545 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.6 pTM=0.605 ipTM=0.146 tol=1.62 2024-12-04 18:06:33,740 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.6 pTM=0.606 ipTM=0.145 tol=1.79 2024-12-04 18:07:03,925 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.6 pTM=0.607 ipTM=0.145 tol=2.43 2024-12-04 18:07:34,119 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.5 pTM=0.605 ipTM=0.146 tol=3.37 2024-12-04 18:08:04,298 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.5 pTM=0.606 ipTM=0.145 tol=1.94 2024-12-04 18:08:34,479 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.9 pTM=0.61 ipTM=0.145 tol=1.46 2024-12-04 18:09:04,647 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.6 pTM=0.605 ipTM=0.146 tol=1.45 2024-12-04 18:09:34,818 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.4 pTM=0.605 ipTM=0.145 tol=2.21 2024-12-04 18:10:05,006 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.6 pTM=0.607 ipTM=0.144 tol=3.04 2024-12-04 18:10:35,198 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.6 pTM=0.607 ipTM=0.146 tol=1.55 2024-12-04 18:11:05,412 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.4 pTM=0.605 ipTM=0.144 tol=1.48 2024-12-04 18:11:35,595 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.6 pTM=0.606 ipTM=0.144 tol=2.32 2024-12-04 18:12:05,735 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.4 pTM=0.604 ipTM=0.144 tol=1.27 2024-12-04 18:12:35,880 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.5 pTM=0.605 ipTM=0.146 tol=2.64 2024-12-04 18:13:06,029 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.4 pTM=0.604 ipTM=0.145 tol=1.57 2024-12-04 18:13:36,160 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.6 pTM=0.605 ipTM=0.145 tol=1.36 2024-12-04 18:14:06,309 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.2 pTM=0.601 ipTM=0.145 tol=1.67 2024-12-04 18:14:36,466 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.4 pTM=0.604 ipTM=0.145 tol=1.96 2024-12-04 18:15:06,591 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.3 pTM=0.603 ipTM=0.144 tol=2.47 2024-12-04 18:15:36,768 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.5 pTM=0.604 ipTM=0.144 tol=1.69 2024-12-04 18:16:06,916 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.5 pTM=0.604 ipTM=0.144 tol=3 2024-12-04 18:16:37,085 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.2 pTM=0.603 ipTM=0.142 tol=3.08 2024-12-04 18:17:07,275 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.2 pTM=0.602 ipTM=0.142 tol=2.5 2024-12-04 18:17:07,276 alphafold2_multimer_v3_model_2_seed_000 took 935.3s (30 recycles) 2024-12-04 18:17:38,283 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.7 pTM=0.61 ipTM=0.165 2024-12-04 18:18:08,415 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62 pTM=0.606 ipTM=0.164 tol=9.57 2024-12-04 18:18:38,575 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.4 pTM=0.605 ipTM=0.163 tol=12 2024-12-04 18:19:08,776 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.4 pTM=0.603 ipTM=0.166 tol=6.86 2024-12-04 18:19:38,983 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.6 pTM=0.605 ipTM=0.164 tol=6.93 2024-12-04 18:20:09,161 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.7 pTM=0.606 ipTM=0.168 tol=5.5 2024-12-04 18:20:39,374 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.9 pTM=0.605 ipTM=0.162 tol=6.59 2024-12-04 18:21:09,558 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.5 pTM=0.604 ipTM=0.167 tol=6.75 2024-12-04 18:21:39,736 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.7 pTM=0.604 ipTM=0.161 tol=7.48 2024-12-04 18:22:09,919 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.7 pTM=0.604 ipTM=0.163 tol=3.89 2024-12-04 18:22:40,098 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63 pTM=0.606 ipTM=0.163 tol=3.5 2024-12-04 18:23:10,265 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.6 pTM=0.603 ipTM=0.161 tol=4.49 2024-12-04 18:23:40,438 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.7 pTM=0.604 ipTM=0.161 tol=3.67 2024-12-04 18:24:10,603 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.9 pTM=0.606 ipTM=0.162 tol=4.62 2024-12-04 18:24:40,764 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.8 pTM=0.603 ipTM=0.161 tol=5.08 2024-12-04 18:25:10,906 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.8 pTM=0.604 ipTM=0.164 tol=1.94 2024-12-04 18:25:41,051 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.9 pTM=0.606 ipTM=0.162 tol=2.05 2024-12-04 18:26:11,184 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.7 pTM=0.604 ipTM=0.163 tol=4.38 2024-12-04 18:26:41,325 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.7 pTM=0.604 ipTM=0.163 tol=3.17 2024-12-04 18:27:11,496 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.8 pTM=0.604 ipTM=0.164 tol=3.54 2024-12-04 18:27:41,648 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.8 pTM=0.604 ipTM=0.162 tol=3.74 2024-12-04 18:28:11,777 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.7 pTM=0.603 ipTM=0.166 tol=2.58 2024-12-04 18:28:41,907 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.4 pTM=0.601 ipTM=0.161 tol=4.52 2024-12-04 18:29:12,060 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.2 pTM=0.605 ipTM=0.164 tol=4.39 2024-12-04 18:29:42,219 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.7 pTM=0.603 ipTM=0.162 tol=4.65 2024-12-04 18:30:12,388 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63 pTM=0.605 ipTM=0.165 tol=3.3 2024-12-04 18:30:42,580 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.8 pTM=0.603 ipTM=0.161 tol=3.08 2024-12-04 18:31:12,782 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.6 pTM=0.603 ipTM=0.164 tol=2.91 2024-12-04 18:31:42,952 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.6 pTM=0.603 ipTM=0.162 tol=4.22 2024-12-04 18:32:13,122 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.6 pTM=0.603 ipTM=0.163 tol=2.07 2024-12-04 18:32:43,314 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63 pTM=0.604 ipTM=0.161 tol=3.37 2024-12-04 18:32:43,315 alphafold2_multimer_v3_model_3_seed_000 took 935.2s (30 recycles) 2024-12-04 18:33:14,243 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.1 pTM=0.61 ipTM=0.15 2024-12-04 18:33:44,374 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.2 pTM=0.61 ipTM=0.155 tol=8.63 2024-12-04 18:34:14,526 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.2 pTM=0.607 ipTM=0.161 tol=5.18 2024-12-04 18:34:44,710 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62.7 pTM=0.606 ipTM=0.155 tol=7.02 2024-12-04 18:35:14,873 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.1 pTM=0.603 ipTM=0.16 tol=4.14 2024-12-04 18:35:45,022 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.5 pTM=0.605 ipTM=0.158 tol=3.12 2024-12-04 18:36:15,182 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=62.7 pTM=0.607 ipTM=0.163 tol=3.17 2024-12-04 18:36:45,318 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.5 pTM=0.604 ipTM=0.156 tol=3.23 2024-12-04 18:37:15,452 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.6 pTM=0.606 ipTM=0.155 tol=1.82 2024-12-04 18:37:45,613 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.8 pTM=0.606 ipTM=0.154 tol=5.12 2024-12-04 18:38:15,754 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63 pTM=0.61 ipTM=0.173 tol=3.5 2024-12-04 18:38:45,896 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63 pTM=0.608 ipTM=0.189 tol=5.45 2024-12-04 18:39:16,010 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.1 pTM=0.611 ipTM=0.189 tol=4.32 2024-12-04 18:39:46,142 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.2 pTM=0.609 ipTM=0.166 tol=2.29 2024-12-04 18:40:16,293 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63 pTM=0.607 ipTM=0.161 tol=2.57 2024-12-04 18:40:46,432 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.2 pTM=0.61 ipTM=0.175 tol=1.75 2024-12-04 18:41:16,588 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.5 pTM=0.613 ipTM=0.217 tol=2.89 2024-12-04 18:41:46,741 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.4 pTM=0.613 ipTM=0.217 tol=2.78 2024-12-04 18:42:16,883 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.3 pTM=0.609 ipTM=0.179 tol=3.79 2024-12-04 18:42:47,035 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.3 pTM=0.608 ipTM=0.166 tol=2.39 2024-12-04 18:43:17,200 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.9 pTM=0.605 ipTM=0.157 tol=1.44 2024-12-04 18:43:47,370 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.9 pTM=0.606 ipTM=0.162 tol=4.64 2024-12-04 18:44:17,545 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.7 pTM=0.605 ipTM=0.158 tol=4.38 2024-12-04 18:44:47,710 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.2 pTM=0.608 ipTM=0.161 tol=4.25 2024-12-04 18:45:17,872 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.8 pTM=0.605 ipTM=0.17 tol=2.88 2024-12-04 18:45:48,047 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63 pTM=0.609 ipTM=0.19 tol=5.3 2024-12-04 18:46:18,233 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.9 pTM=0.607 ipTM=0.182 tol=1.65 2024-12-04 18:46:48,413 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.1 pTM=0.609 ipTM=0.178 tol=1.32 2024-12-04 18:47:18,591 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.1 pTM=0.608 ipTM=0.187 tol=2.16 2024-12-04 18:47:48,772 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.9 pTM=0.606 ipTM=0.17 tol=3.25 2024-12-04 18:48:18,944 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.1 pTM=0.608 ipTM=0.174 tol=3.03 2024-12-04 18:48:18,945 alphafold2_multimer_v3_model_4_seed_000 took 934.8s (30 recycles) 2024-12-04 18:48:50,008 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.6 pTM=0.607 ipTM=0.149 2024-12-04 18:49:20,204 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.9 pTM=0.609 ipTM=0.151 tol=10.7 2024-12-04 18:49:50,424 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63 pTM=0.608 ipTM=0.153 tol=6.94 2024-12-04 18:50:20,623 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.4 pTM=0.609 ipTM=0.163 tol=4.41 2024-12-04 18:50:50,799 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.3 pTM=0.609 ipTM=0.17 tol=3.92 2024-12-04 18:51:20,964 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.6 pTM=0.61 ipTM=0.173 tol=2.56 2024-12-04 18:51:51,143 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.6 pTM=0.611 ipTM=0.174 tol=3.47 2024-12-04 18:52:21,317 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.6 pTM=0.612 ipTM=0.178 tol=1.87 2024-12-04 18:52:51,531 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.7 pTM=0.612 ipTM=0.169 tol=2.39 2024-12-04 18:53:21,800 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.8 pTM=0.613 ipTM=0.168 tol=1.91 2024-12-04 18:53:52,037 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.7 pTM=0.614 ipTM=0.169 tol=3.08 2024-12-04 18:54:22,265 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.7 pTM=0.613 ipTM=0.166 tol=1.56 2024-12-04 18:54:52,501 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.5 pTM=0.613 ipTM=0.168 tol=3.42 2024-12-04 18:55:22,756 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.9 pTM=0.615 ipTM=0.17 tol=3.42 2024-12-04 18:55:53,000 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.4 pTM=0.611 ipTM=0.169 tol=2.84 2024-12-04 18:56:23,235 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.7 pTM=0.614 ipTM=0.161 tol=2.76 2024-12-04 18:56:53,470 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.6 pTM=0.613 ipTM=0.17 tol=2.94 2024-12-04 18:57:23,682 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.5 pTM=0.613 ipTM=0.171 tol=2.53 2024-12-04 18:57:53,883 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.7 pTM=0.615 ipTM=0.174 tol=2.58 2024-12-04 18:58:24,093 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.8 pTM=0.614 ipTM=0.177 tol=3.34 2024-12-04 18:58:54,294 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.5 pTM=0.612 ipTM=0.175 tol=1.97 2024-12-04 18:59:24,501 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.4 pTM=0.612 ipTM=0.171 tol=3.16 2024-12-04 18:59:54,712 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.3 pTM=0.612 ipTM=0.167 tol=2.37 2024-12-04 19:00:24,932 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.6 pTM=0.613 ipTM=0.177 tol=1.6 2024-12-04 19:00:55,174 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.3 pTM=0.612 ipTM=0.172 tol=1.63 2024-12-04 19:01:25,407 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.6 pTM=0.614 ipTM=0.177 tol=1.83 2024-12-04 19:01:55,665 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.4 pTM=0.613 ipTM=0.174 tol=1.52 2024-12-04 19:02:25,917 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.6 pTM=0.615 ipTM=0.172 tol=1.91 2024-12-04 19:02:56,151 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.4 pTM=0.612 ipTM=0.181 tol=3.09 2024-12-04 19:03:26,391 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.3 pTM=0.611 ipTM=0.175 tol=1.8 2024-12-04 19:03:56,629 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.5 pTM=0.613 ipTM=0.178 tol=1.21 2024-12-04 19:03:56,631 alphafold2_multimer_v3_model_5_seed_000 took 936.9s (30 recycles) 2024-12-04 19:03:57,425 reranking models by 'multimer' metric 2024-12-04 19:04:01,784 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-04 19:05:25,691 Relaxation took 88.3s 2024-12-04 19:05:25,691 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.5 pTM=0.613 ipTM=0.178 2024-12-04 19:07:14,753 Relaxation took 109.1s 2024-12-04 19:07:14,753 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.1 pTM=0.608 ipTM=0.174 2024-12-04 19:08:32,519 Relaxation took 77.8s 2024-12-04 19:08:32,519 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.6 pTM=0.604 ipTM=0.163 2024-12-04 19:10:20,149 Relaxation took 107.6s 2024-12-04 19:10:20,149 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63 pTM=0.604 ipTM=0.161 2024-12-04 19:11:42,653 Relaxation took 82.5s 2024-12-04 19:11:42,653 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.2 pTM=0.602 ipTM=0.142 2024-12-04 19:11:44,868 Done