2024-12-04 19:04:09,400 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 19:04:09,733 Running on GPU
2024-12-04 19:04:14,338 Found 6 citations for tools or databases
2024-12-04 19:04:14,338 Query 1/1: ARNT_SLX1A (length 1064)
2024-12-04 19:04:14,633 Sleeping for 10s. Reason: PENDING
2024-12-04 19:04:24,892 Sleeping for 6s. Reason: RUNNING
2024-12-04 19:04:31,155 Sleeping for 9s. Reason: RUNNING
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2024-12-04 19:05:09,185 Sleeping for 8s. Reason: RUNNING
2024-12-04 19:05:17,454 Sleeping for 8s. Reason: RUNNING
2024-12-04 19:05:25,713 Sleeping for 8s. Reason: RUNNING
2024-12-04 19:05:33,978 Sleeping for 6s. Reason: RUNNING
2024-12-04 19:05:40,237 Sleeping for 7s. Reason: RUNNING
2024-12-04 19:05:47,497 Sleeping for 8s. Reason: RUNNING
2024-12-04 19:05:55,753 Sleeping for 8s. Reason: RUNNING
2024-12-04 19:06:04,009 Sleeping for 10s. Reason: RUNNING
2024-12-04 19:06:14,272 Sleeping for 9s. Reason: RUNNING
2024-12-04 19:06:23,535 Sleeping for 5s. Reason: RUNNING
2024-12-04 19:06:28,792 Sleeping for 6s. Reason: RUNNING
2024-12-04 19:06:35,056 Sleeping for 10s. Reason: RUNNING
2024-12-04 19:06:45,323 Sleeping for 7s. Reason: RUNNING
2024-12-04 19:06:52,577 Sleeping for 5s. Reason: RUNNING
2024-12-04 19:06:57,838 Sleeping for 8s. Reason: RUNNING
2024-12-04 19:07:08,326 Sleeping for 10s. Reason: PENDING
2024-12-04 19:07:18,589 Sleeping for 6s. Reason: RUNNING
2024-12-04 19:07:25,197 Sleeping for 10s. Reason: RUNNING
2024-12-04 19:07:35,465 Sleeping for 6s. Reason: RUNNING
2024-12-04 19:07:41,721 Sleeping for 5s. Reason: RUNNING
2024-12-04 19:07:46,973 Sleeping for 9s. Reason: RUNNING
2024-12-04 19:07:56,238 Sleeping for 6s. Reason: RUNNING
2024-12-04 19:08:02,494 Sleeping for 9s. Reason: RUNNING
2024-12-04 19:08:11,757 Sleeping for 7s. Reason: RUNNING
2024-12-04 19:08:19,012 Sleeping for 9s. Reason: RUNNING
2024-12-04 19:08:28,270 Sleeping for 9s. Reason: RUNNING
2024-12-04 19:08:37,532 Sleeping for 7s. Reason: RUNNING
2024-12-04 19:08:44,789 Sleeping for 7s. Reason: RUNNING
2024-12-04 19:08:52,050 Sleeping for 7s. Reason: RUNNING
2024-12-04 19:09:02,025 Setting max_seq=508, max_extra_seq=2048
2024-12-04 19:11:18,496 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=45.5 pTM=0.337 ipTM=0.201
2024-12-04 19:11:39,982 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.9 pTM=0.329 ipTM=0.197 tol=16.7
2024-12-04 19:12:01,599 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=46.2 pTM=0.326 ipTM=0.19 tol=10.4
2024-12-04 19:12:23,268 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.8 pTM=0.328 ipTM=0.193 tol=9.59
2024-12-04 19:12:44,937 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.2 pTM=0.326 ipTM=0.195 tol=7.22
2024-12-04 19:13:06,686 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.9 pTM=0.327 ipTM=0.193 tol=6.01
2024-12-04 19:13:28,468 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.8 pTM=0.327 ipTM=0.197 tol=3.59
2024-12-04 19:13:50,238 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.7 pTM=0.329 ipTM=0.199 tol=3.89
2024-12-04 19:14:12,020 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=46.9 pTM=0.33 ipTM=0.2 tol=5.41
2024-12-04 19:14:33,845 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47 pTM=0.329 ipTM=0.199 tol=5.21
2024-12-04 19:14:55,679 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.1 pTM=0.331 ipTM=0.206 tol=4.96
2024-12-04 19:15:17,507 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.2 pTM=0.329 ipTM=0.195 tol=7.33
2024-12-04 19:15:39,328 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.1 pTM=0.331 ipTM=0.197 tol=4.88
2024-12-04 19:16:01,170 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=46.7 pTM=0.331 ipTM=0.201 tol=6.43
2024-12-04 19:16:23,016 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.8 pTM=0.327 ipTM=0.197 tol=6.5
2024-12-04 19:16:44,879 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.1 pTM=0.328 ipTM=0.193 tol=3.54
2024-12-04 19:17:06,711 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=46.9 pTM=0.328 ipTM=0.199 tol=4.41
2024-12-04 19:17:28,565 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.7 pTM=0.333 ipTM=0.216 tol=4.06
2024-12-04 19:17:50,399 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=46 pTM=0.331 ipTM=0.202 tol=19.8
2024-12-04 19:18:12,238 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.7 pTM=0.331 ipTM=0.196 tol=13.3
2024-12-04 19:18:34,114 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=46.8 pTM=0.326 ipTM=0.194 tol=7.86
2024-12-04 19:18:56,000 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=46.7 pTM=0.328 ipTM=0.206 tol=8.73
2024-12-04 19:19:17,872 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=46.6 pTM=0.327 ipTM=0.198 tol=11.1
2024-12-04 19:19:39,779 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.2 pTM=0.331 ipTM=0.201 tol=9.23
2024-12-04 19:20:01,648 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.1 pTM=0.332 ipTM=0.206 tol=6.89
2024-12-04 19:20:23,498 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46.7 pTM=0.333 ipTM=0.208 tol=7.16
2024-12-04 19:20:45,333 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47 pTM=0.329 ipTM=0.204 tol=3.73
2024-12-04 19:21:07,157 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47 pTM=0.329 ipTM=0.199 tol=5.93
2024-12-04 19:21:28,984 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=46.8 pTM=0.33 ipTM=0.202 tol=6.17
2024-12-04 19:21:50,844 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=46.8 pTM=0.329 ipTM=0.202 tol=4.88
2024-12-04 19:22:12,715 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47 pTM=0.328 ipTM=0.198 tol=4.4
2024-12-04 19:22:12,716 alphafold2_multimer_v3_model_1_seed_000 took 784.4s (30 recycles)
2024-12-04 19:22:35,200 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.6 pTM=0.323 ipTM=0.178
2024-12-04 19:22:57,024 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=45.4 pTM=0.328 ipTM=0.201 tol=16
2024-12-04 19:23:18,888 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.5 pTM=0.331 ipTM=0.203 tol=9.5
2024-12-04 19:23:40,745 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46.8 pTM=0.331 ipTM=0.222 tol=5.64
2024-12-04 19:24:02,610 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.1 pTM=0.329 ipTM=0.202 tol=3.58
2024-12-04 19:24:24,478 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=46.6 pTM=0.329 ipTM=0.209 tol=4.47
2024-12-04 19:24:46,359 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.1 pTM=0.325 ipTM=0.193 tol=4.77
2024-12-04 19:25:08,226 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=46.9 pTM=0.33 ipTM=0.2 tol=4.18
2024-12-04 19:25:30,105 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.8 pTM=0.327 ipTM=0.192 tol=4.45
2024-12-04 19:25:51,962 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=46.8 pTM=0.327 ipTM=0.194 tol=3.53
2024-12-04 19:26:13,841 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.2 pTM=0.327 ipTM=0.193 tol=4.03
2024-12-04 19:26:35,712 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.2 pTM=0.327 ipTM=0.194 tol=2.72
2024-12-04 19:26:57,603 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47 pTM=0.329 ipTM=0.202 tol=3.75
2024-12-04 19:27:19,489 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.3 pTM=0.325 ipTM=0.187 tol=3.04
2024-12-04 19:27:41,375 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.2 pTM=0.326 ipTM=0.189 tol=2.9
2024-12-04 19:28:03,282 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47.1 pTM=0.326 ipTM=0.188 tol=2.99
2024-12-04 19:28:25,209 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.3 pTM=0.327 ipTM=0.197 tol=3.35
2024-12-04 19:28:47,070 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47 pTM=0.325 ipTM=0.192 tol=3.84
2024-12-04 19:29:08,940 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.2 pTM=0.326 ipTM=0.188 tol=4.01
2024-12-04 19:29:30,789 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=46.8 pTM=0.328 ipTM=0.193 tol=2.93
2024-12-04 19:29:52,645 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.1 pTM=0.33 ipTM=0.207 tol=2.88
2024-12-04 19:30:14,504 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=46.9 pTM=0.327 ipTM=0.193 tol=4.32
2024-12-04 19:30:36,352 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=46.9 pTM=0.328 ipTM=0.197 tol=5.33
2024-12-04 19:30:58,240 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=46.9 pTM=0.327 ipTM=0.198 tol=5.66
2024-12-04 19:31:20,135 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.2 pTM=0.328 ipTM=0.199 tol=4.21
2024-12-04 19:31:42,049 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46.3 pTM=0.326 ipTM=0.195 tol=6.72
2024-12-04 19:32:03,963 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47 pTM=0.325 ipTM=0.186 tol=6.7
2024-12-04 19:32:25,848 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47 pTM=0.324 ipTM=0.186 tol=4.91
2024-12-04 19:32:47,732 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.1 pTM=0.328 ipTM=0.191 tol=5.7
2024-12-04 19:33:09,621 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=46.8 pTM=0.326 ipTM=0.195 tol=5.12
2024-12-04 19:33:31,543 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47 pTM=0.326 ipTM=0.189 tol=3.37
2024-12-04 19:33:31,543 alphafold2_multimer_v3_model_2_seed_000 took 678.1s (30 recycles)
2024-12-04 19:33:54,176 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=46 pTM=0.34 ipTM=0.257
2024-12-04 19:34:16,150 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=44.8 pTM=0.337 ipTM=0.197 tol=14
2024-12-04 19:34:38,102 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45.5 pTM=0.344 ipTM=0.232 tol=9.67
2024-12-04 19:35:00,108 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=45.7 pTM=0.328 ipTM=0.187 tol=8.01
2024-12-04 19:35:22,092 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=46.1 pTM=0.33 ipTM=0.186 tol=6.04
2024-12-04 19:35:44,069 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=45.8 pTM=0.334 ipTM=0.21 tol=6.23
2024-12-04 19:36:06,033 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=46.1 pTM=0.331 ipTM=0.19 tol=6.4
2024-12-04 19:36:28,014 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=46.2 pTM=0.331 ipTM=0.181 tol=7.29
2024-12-04 19:36:50,012 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=45.8 pTM=0.332 ipTM=0.187 tol=5.89
2024-12-04 19:37:12,026 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=46.1 pTM=0.333 ipTM=0.188 tol=7.92
2024-12-04 19:37:34,023 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=46.5 pTM=0.34 ipTM=0.241 tol=10.1
2024-12-04 19:37:55,996 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=45.7 pTM=0.329 ipTM=0.186 tol=7.62
2024-12-04 19:38:17,997 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.5 pTM=0.329 ipTM=0.19 tol=5.85
2024-12-04 19:38:40,013 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=46.3 pTM=0.33 ipTM=0.182 tol=4.02
2024-12-04 19:39:02,011 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=46.3 pTM=0.332 ipTM=0.189 tol=9.23
2024-12-04 19:39:24,002 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=46 pTM=0.338 ipTM=0.222 tol=5.23
2024-12-04 19:39:46,011 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=45.7 pTM=0.33 ipTM=0.193 tol=9.27
2024-12-04 19:40:07,990 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=46.2 pTM=0.334 ipTM=0.194 tol=5.64
2024-12-04 19:40:29,989 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=46.2 pTM=0.332 ipTM=0.191 tol=3.39
2024-12-04 19:40:52,004 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=46.6 pTM=0.332 ipTM=0.186 tol=3.55
2024-12-04 19:41:14,003 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=46.7 pTM=0.331 ipTM=0.185 tol=4.14
2024-12-04 19:41:36,021 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=46.9 pTM=0.33 ipTM=0.182 tol=4.51
2024-12-04 19:41:58,021 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=46.7 pTM=0.331 ipTM=0.186 tol=3.45
2024-12-04 19:42:20,022 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.1 pTM=0.331 ipTM=0.186 tol=3.01
2024-12-04 19:42:42,030 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.4 pTM=0.329 ipTM=0.185 tol=6.39
2024-12-04 19:43:04,070 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=45.9 pTM=0.334 ipTM=0.215 tol=7.52
2024-12-04 19:43:26,082 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.3 pTM=0.333 ipTM=0.209 tol=6.91
2024-12-04 19:43:48,071 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46.8 pTM=0.331 ipTM=0.196 tol=5.05
2024-12-04 19:44:10,058 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=46.8 pTM=0.332 ipTM=0.187 tol=2.65
2024-12-04 19:44:32,058 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46.9 pTM=0.331 ipTM=0.186 tol=5.69
2024-12-04 19:44:54,065 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.1 pTM=0.33 ipTM=0.184 tol=5.65
2024-12-04 19:44:54,066 alphafold2_multimer_v3_model_3_seed_000 took 681.8s (30 recycles)
2024-12-04 19:45:16,674 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.2 pTM=0.341 ipTM=0.288
2024-12-04 19:45:38,605 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.3 pTM=0.347 ipTM=0.346 tol=18.6
2024-12-04 19:46:00,585 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=43.8 pTM=0.325 ipTM=0.215 tol=11.6
2024-12-04 19:46:22,581 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=43.9 pTM=0.325 ipTM=0.199 tol=6.27
2024-12-04 19:46:44,535 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=44.8 pTM=0.357 ipTM=0.377 tol=9.41
2024-12-04 19:47:06,495 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.8 pTM=0.331 ipTM=0.247 tol=9.66
2024-12-04 19:47:28,505 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=44.3 pTM=0.328 ipTM=0.2 tol=6.11
2024-12-04 19:47:50,463 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44.6 pTM=0.343 ipTM=0.284 tol=6.77
2024-12-04 19:48:12,465 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.2 pTM=0.327 ipTM=0.193 tol=6.77
2024-12-04 19:48:34,460 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=44.6 pTM=0.325 ipTM=0.187 tol=5.57
2024-12-04 19:48:56,489 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=45 pTM=0.323 ipTM=0.187 tol=8.89
2024-12-04 19:49:18,502 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=44.4 pTM=0.324 ipTM=0.192 tol=3.98
2024-12-04 19:49:40,543 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=44.6 pTM=0.324 ipTM=0.19 tol=10.1
2024-12-04 19:50:02,520 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=44.4 pTM=0.331 ipTM=0.211 tol=11.7
2024-12-04 19:50:24,555 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=44.9 pTM=0.323 ipTM=0.187 tol=11.4
2024-12-04 19:50:46,570 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=44.3 pTM=0.326 ipTM=0.19 tol=7.71
2024-12-04 19:51:08,638 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=44.7 pTM=0.319 ipTM=0.192 tol=7.62
2024-12-04 19:51:30,624 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=44.6 pTM=0.323 ipTM=0.193 tol=8.77
2024-12-04 19:51:52,627 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=44.5 pTM=0.324 ipTM=0.189 tol=5.08
2024-12-04 19:52:14,601 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=44.3 pTM=0.327 ipTM=0.202 tol=7.83
2024-12-04 19:52:36,592 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=44.8 pTM=0.324 ipTM=0.192 tol=6.07
2024-12-04 19:52:58,579 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=44.6 pTM=0.328 ipTM=0.201 tol=5.69
2024-12-04 19:53:20,565 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=44.4 pTM=0.328 ipTM=0.196 tol=6.77
2024-12-04 19:53:42,523 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=44.8 pTM=0.328 ipTM=0.192 tol=6.14
2024-12-04 19:54:04,490 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=44.6 pTM=0.329 ipTM=0.201 tol=4.2
2024-12-04 19:54:26,425 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=44.5 pTM=0.33 ipTM=0.2 tol=7.01
2024-12-04 19:54:48,392 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=44.1 pTM=0.328 ipTM=0.193 tol=3.95
2024-12-04 19:55:10,330 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=44.1 pTM=0.332 ipTM=0.199 tol=4.95
2024-12-04 19:55:32,293 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=44.3 pTM=0.328 ipTM=0.198 tol=6.09
2024-12-04 19:55:54,288 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=44.1 pTM=0.327 ipTM=0.194 tol=6.45
2024-12-04 19:56:16,303 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=44.5 pTM=0.33 ipTM=0.202 tol=7.33
2024-12-04 19:56:16,304 alphafold2_multimer_v3_model_4_seed_000 took 681.5s (30 recycles)
2024-12-04 19:56:38,913 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45 pTM=0.334 ipTM=0.444
2024-12-04 19:57:00,916 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=43.9 pTM=0.321 ipTM=0.199 tol=14.9
2024-12-04 19:57:22,952 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.4 pTM=0.321 ipTM=0.189 tol=10.4
2024-12-04 19:57:44,971 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46 pTM=0.323 ipTM=0.188 tol=9.15
2024-12-04 19:58:07,025 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.2 pTM=0.323 ipTM=0.183 tol=4.4
2024-12-04 19:58:29,078 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.2 pTM=0.326 ipTM=0.188 tol=8.25
2024-12-04 19:58:51,107 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.8 pTM=0.326 ipTM=0.188 tol=7.8
2024-12-04 19:59:13,134 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.7 pTM=0.327 ipTM=0.188 tol=5.91
2024-12-04 19:59:35,170 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.4 pTM=0.326 ipTM=0.195 tol=6.71
2024-12-04 19:59:57,171 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.5 pTM=0.328 ipTM=0.197 tol=6.14
2024-12-04 20:00:19,200 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.4 pTM=0.33 ipTM=0.201 tol=5.44
2024-12-04 20:00:41,237 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.4 pTM=0.329 ipTM=0.193 tol=5.99
2024-12-04 20:01:03,234 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.1 pTM=0.331 ipTM=0.194 tol=6.34
2024-12-04 20:01:25,238 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.3 pTM=0.328 ipTM=0.192 tol=6.3
2024-12-04 20:01:47,238 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.8 pTM=0.33 ipTM=0.199 tol=8.49
2024-12-04 20:02:09,245 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.6 pTM=0.328 ipTM=0.187 tol=4.61
2024-12-04 20:02:31,247 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.7 pTM=0.328 ipTM=0.186 tol=6.25
2024-12-04 20:02:53,276 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.3 pTM=0.331 ipTM=0.201 tol=5.7
2024-12-04 20:03:15,268 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.1 pTM=0.334 ipTM=0.207 tol=6.43
2024-12-04 20:03:37,281 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.6 pTM=0.331 ipTM=0.197 tol=7.56
2024-12-04 20:03:59,282 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.2 pTM=0.331 ipTM=0.191 tol=5.14
2024-12-04 20:04:21,305 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.4 pTM=0.327 ipTM=0.185 tol=4.63
2024-12-04 20:04:43,309 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46.8 pTM=0.329 ipTM=0.189 tol=5.58
2024-12-04 20:05:05,291 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.3 pTM=0.328 ipTM=0.189 tol=4.78
2024-12-04 20:05:27,275 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.1 pTM=0.331 ipTM=0.196 tol=3.59
2024-12-04 20:05:49,268 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47 pTM=0.33 ipTM=0.194 tol=4.46
2024-12-04 20:06:11,288 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47 pTM=0.328 ipTM=0.198 tol=5.14
2024-12-04 20:06:33,301 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.7 pTM=0.328 ipTM=0.184 tol=7
2024-12-04 20:06:55,335 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.4 pTM=0.327 ipTM=0.183 tol=5.28
2024-12-04 20:07:17,417 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46.9 pTM=0.328 ipTM=0.189 tol=5.32
2024-12-04 20:07:39,447 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.4 pTM=0.327 ipTM=0.188 tol=6.53
2024-12-04 20:07:39,448 alphafold2_multimer_v3_model_5_seed_000 took 682.5s (30 recycles)
2024-12-04 20:07:40,144 reranking models by 'multimer' metric
2024-12-04 20:07:45,151 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 20:09:40,660 Relaxation took 120.5s
2024-12-04 20:09:40,661 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=44.5 pTM=0.33 ipTM=0.202
2024-12-04 20:11:25,124 Relaxation took 104.5s
2024-12-04 20:11:25,124 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47 pTM=0.328 ipTM=0.198
2024-12-04 20:13:28,600 Relaxation took 123.5s
2024-12-04 20:13:28,600 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47 pTM=0.326 ipTM=0.189
2024-12-04 20:15:27,658 Relaxation took 119.1s
2024-12-04 20:15:27,658 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.4 pTM=0.327 ipTM=0.188
2024-12-04 20:16:55,866 Relaxation took 88.2s
2024-12-04 20:16:55,866 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.1 pTM=0.33 ipTM=0.184
2024-12-04 20:16:57,759 Done