2024-12-04 22:30:16,073 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 22:30:16,380 Running on GPU
2024-12-04 22:30:22,232 Found 6 citations for tools or databases
2024-12-04 22:30:22,233 Query 1/1: ATG16L1_ATG5 (length 882)
2024-12-04 22:30:22,533 Sleeping for 7s. Reason: PENDING
2024-12-04 22:30:29,794 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:30:37,050 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:30:46,306 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:30:54,707 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:31:00,968 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:31:11,231 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:31:18,491 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:31:27,759 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:31:38,030 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:31:48,296 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:31:56,557 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:32:01,809 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:32:10,078 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:32:15,331 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:32:21,587 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:32:26,841 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:32:37,097 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:32:48,153 Sleeping for 9s. Reason: PENDING
2024-12-04 22:32:57,409 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:33:06,664 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:33:14,926 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:33:25,188 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:33:34,447 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:33:42,702 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:33:52,973 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:34:01,230 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:34:06,491 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:34:17,090 Setting max_seq=508, max_extra_seq=2048
2024-12-04 22:36:59,350 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=75.4 pTM=0.614 ipTM=0.938
2024-12-04 22:37:15,632 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=76.7 pTM=0.487 ipTM=0.94 tol=6.32
2024-12-04 22:37:31,946 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=77.5 pTM=0.494 ipTM=0.939 tol=2.14
2024-12-04 22:37:48,288 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=77.6 pTM=0.48 ipTM=0.938 tol=1.65
2024-12-04 22:38:04,648 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77.1 pTM=0.474 ipTM=0.935 tol=6.34
2024-12-04 22:38:21,023 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=76.9 pTM=0.454 ipTM=0.933 tol=3.18
2024-12-04 22:38:37,426 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75.3 pTM=0.465 ipTM=0.932 tol=6.61
2024-12-04 22:38:53,856 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=77 pTM=0.463 ipTM=0.934 tol=6.62
2024-12-04 22:39:10,285 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77.4 pTM=0.468 ipTM=0.934 tol=4.64
2024-12-04 22:39:26,724 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=77.6 pTM=0.464 ipTM=0.933 tol=1.31
2024-12-04 22:39:43,160 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.2 pTM=0.46 ipTM=0.932 tol=11.7
2024-12-04 22:39:59,617 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=75.8 pTM=0.448 ipTM=0.932 tol=4.62
2024-12-04 22:40:16,070 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=76.7 pTM=0.446 ipTM=0.932 tol=6.68
2024-12-04 22:40:32,530 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=77.4 pTM=0.457 ipTM=0.933 tol=2.77
2024-12-04 22:40:48,987 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=77.1 pTM=0.45 ipTM=0.933 tol=3.75
2024-12-04 22:41:05,434 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=77.6 pTM=0.471 ipTM=0.934 tol=3.64
2024-12-04 22:41:21,897 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=77.7 pTM=0.46 ipTM=0.933 tol=1.67
2024-12-04 22:41:38,364 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=77.4 pTM=0.455 ipTM=0.934 tol=1.03
2024-12-04 22:41:54,812 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=77.3 pTM=0.452 ipTM=0.931 tol=2.25
2024-12-04 22:42:11,280 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=77.4 pTM=0.462 ipTM=0.934 tol=2.29
2024-12-04 22:42:27,726 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=77.3 pTM=0.47 ipTM=0.932 tol=1.57
2024-12-04 22:42:44,210 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=77.6 pTM=0.507 ipTM=0.937 tol=2.62
2024-12-04 22:43:00,676 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=77.4 pTM=0.487 ipTM=0.935 tol=1.91
2024-12-04 22:43:17,175 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.2 pTM=0.631 ipTM=0.938 tol=14.5
2024-12-04 22:43:33,673 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=75.9 pTM=0.465 ipTM=0.935 tol=11.2
2024-12-04 22:43:50,139 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=76.2 pTM=0.491 ipTM=0.933 tol=10.3
2024-12-04 22:44:06,605 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=76.7 pTM=0.489 ipTM=0.935 tol=6.07
2024-12-04 22:44:23,065 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=76.8 pTM=0.486 ipTM=0.935 tol=1.92
2024-12-04 22:44:39,516 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=76.9 pTM=0.471 ipTM=0.933 tol=2.29
2024-12-04 22:44:55,964 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=76.8 pTM=0.469 ipTM=0.932 tol=1.85
2024-12-04 22:45:12,410 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=76.8 pTM=0.454 ipTM=0.932 tol=1.53
2024-12-04 22:45:12,411 alphafold2_multimer_v3_model_1_seed_000 took 649.0s (30 recycles)
2024-12-04 22:45:29,406 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.3 pTM=0.502 ipTM=0.932
2024-12-04 22:45:45,950 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=77.6 pTM=0.516 ipTM=0.941 tol=9.07
2024-12-04 22:46:02,494 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=77.5 pTM=0.468 ipTM=0.938 tol=6.75
2024-12-04 22:46:18,989 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=78.1 pTM=0.478 ipTM=0.936 tol=3.4
2024-12-04 22:46:35,512 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=78.1 pTM=0.457 ipTM=0.935 tol=1.71
2024-12-04 22:46:52,031 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.4 pTM=0.467 ipTM=0.935 tol=1.21
2024-12-04 22:47:08,550 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.2 pTM=0.451 ipTM=0.935 tol=0.802
2024-12-04 22:47:25,058 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=78.4 pTM=0.462 ipTM=0.935 tol=1.22
2024-12-04 22:47:41,577 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=78.4 pTM=0.448 ipTM=0.935 tol=1.33
2024-12-04 22:47:58,089 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=78.8 pTM=0.453 ipTM=0.934 tol=2.33
2024-12-04 22:48:14,596 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=78.6 pTM=0.443 ipTM=0.935 tol=0.817
2024-12-04 22:48:31,117 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=78.8 pTM=0.443 ipTM=0.934 tol=1.67
2024-12-04 22:48:47,633 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=79 pTM=0.441 ipTM=0.934 tol=1.57
2024-12-04 22:49:04,167 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.9 pTM=0.449 ipTM=0.935 tol=2.89
2024-12-04 22:49:20,696 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=78.9 pTM=0.453 ipTM=0.935 tol=2.58
2024-12-04 22:49:37,224 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.1 pTM=0.457 ipTM=0.934 tol=3.43
2024-12-04 22:49:53,752 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.6 pTM=0.458 ipTM=0.935 tol=2.52
2024-12-04 22:50:10,259 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=78.6 pTM=0.473 ipTM=0.936 tol=2.99
2024-12-04 22:50:26,792 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=78.6 pTM=0.459 ipTM=0.934 tol=4.92
2024-12-04 22:50:43,348 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=78.6 pTM=0.457 ipTM=0.935 tol=1.75
2024-12-04 22:50:59,878 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78.6 pTM=0.463 ipTM=0.935 tol=1.45
2024-12-04 22:51:16,406 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=78.2 pTM=0.452 ipTM=0.934 tol=2.34
2024-12-04 22:51:32,905 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.8 pTM=0.455 ipTM=0.934 tol=2.43
2024-12-04 22:51:49,425 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.3 pTM=0.45 ipTM=0.935 tol=2.02
2024-12-04 22:52:05,952 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=78.6 pTM=0.452 ipTM=0.935 tol=1.62
2024-12-04 22:52:22,501 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78.6 pTM=0.453 ipTM=0.936 tol=2.87
2024-12-04 22:52:39,027 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.8 pTM=0.456 ipTM=0.934 tol=2.52
2024-12-04 22:52:55,559 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.8 pTM=0.453 ipTM=0.936 tol=1.94
2024-12-04 22:53:12,067 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=78.8 pTM=0.451 ipTM=0.933 tol=1.59
2024-12-04 22:53:28,588 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=78.7 pTM=0.446 ipTM=0.934 tol=1.89
2024-12-04 22:53:45,115 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.6 pTM=0.445 ipTM=0.933 tol=1.29
2024-12-04 22:53:45,116 alphafold2_multimer_v3_model_2_seed_000 took 512.2s (30 recycles)
2024-12-04 22:54:02,145 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.2 pTM=0.419 ipTM=0.924
2024-12-04 22:54:18,731 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.4 pTM=0.419 ipTM=0.926 tol=9.02
2024-12-04 22:54:35,334 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=77.2 pTM=0.424 ipTM=0.927 tol=8.54
2024-12-04 22:54:51,901 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.6 pTM=0.427 ipTM=0.923 tol=5.34
2024-12-04 22:55:08,488 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=78.1 pTM=0.43 ipTM=0.927 tol=4.1
2024-12-04 22:55:25,053 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.7 pTM=0.429 ipTM=0.923 tol=2.64
2024-12-04 22:55:41,619 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=77.6 pTM=0.429 ipTM=0.924 tol=2.27
2024-12-04 22:55:58,193 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=77.6 pTM=0.426 ipTM=0.921 tol=3.3
2024-12-04 22:56:14,751 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=77.6 pTM=0.427 ipTM=0.924 tol=2.58
2024-12-04 22:56:31,319 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=77.1 pTM=0.425 ipTM=0.92 tol=2.34
2024-12-04 22:56:47,893 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=76.4 pTM=0.42 ipTM=0.919 tol=9.39
2024-12-04 22:57:04,476 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=76.8 pTM=0.424 ipTM=0.923 tol=4.87
2024-12-04 22:57:21,041 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=76.9 pTM=0.422 ipTM=0.922 tol=4.12
2024-12-04 22:57:37,623 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77 pTM=0.422 ipTM=0.923 tol=2.22
2024-12-04 22:57:54,185 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=76.9 pTM=0.422 ipTM=0.922 tol=1.48
2024-12-04 22:58:10,768 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77 pTM=0.423 ipTM=0.923 tol=0.891
2024-12-04 22:58:27,352 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=77.2 pTM=0.422 ipTM=0.923 tol=1.72
2024-12-04 22:58:43,931 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77 pTM=0.423 ipTM=0.921 tol=0.967
2024-12-04 22:59:00,516 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=76.9 pTM=0.422 ipTM=0.921 tol=1.97
2024-12-04 22:59:17,115 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.1 pTM=0.423 ipTM=0.924 tol=1.79
2024-12-04 22:59:33,704 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.1 pTM=0.423 ipTM=0.921 tol=1.12
2024-12-04 22:59:50,289 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.1 pTM=0.423 ipTM=0.922 tol=1.27
2024-12-04 23:00:06,869 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.1 pTM=0.426 ipTM=0.924 tol=3.26
2024-12-04 23:00:23,452 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.1 pTM=0.429 ipTM=0.922 tol=4.42
2024-12-04 23:00:40,029 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.3 pTM=0.427 ipTM=0.923 tol=3.47
2024-12-04 23:00:56,599 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.4 pTM=0.427 ipTM=0.922 tol=2.43
2024-12-04 23:01:13,166 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77.4 pTM=0.428 ipTM=0.921 tol=1.91
2024-12-04 23:01:29,724 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.5 pTM=0.427 ipTM=0.92 tol=0.969
2024-12-04 23:01:46,297 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.6 pTM=0.425 ipTM=0.919 tol=1.49
2024-12-04 23:02:02,868 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.7 pTM=0.428 ipTM=0.922 tol=2.05
2024-12-04 23:02:19,425 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.6 pTM=0.426 ipTM=0.92 tol=3
2024-12-04 23:02:19,426 alphafold2_multimer_v3_model_3_seed_000 took 513.8s (30 recycles)
2024-12-04 23:02:36,443 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=74.1 pTM=0.567 ipTM=0.932
2024-12-04 23:02:53,063 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.1 pTM=0.478 ipTM=0.939 tol=6.14
2024-12-04 23:03:09,655 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=74.8 pTM=0.456 ipTM=0.936 tol=5.39
2024-12-04 23:03:26,269 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=75.1 pTM=0.459 ipTM=0.935 tol=3.98
2024-12-04 23:03:42,909 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=75.2 pTM=0.435 ipTM=0.931 tol=4.18
2024-12-04 23:03:59,509 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=75.1 pTM=0.452 ipTM=0.93 tol=7.62
2024-12-04 23:04:16,103 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=75.2 pTM=0.444 ipTM=0.93 tol=6.38
2024-12-04 23:04:32,724 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=75.4 pTM=0.441 ipTM=0.93 tol=2.86
2024-12-04 23:04:49,340 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=75.1 pTM=0.459 ipTM=0.931 tol=5.72
2024-12-04 23:05:05,951 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=75.2 pTM=0.453 ipTM=0.932 tol=8.06
2024-12-04 23:05:22,597 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=74.4 pTM=0.43 ipTM=0.928 tol=9.38
2024-12-04 23:05:39,206 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=75.6 pTM=0.461 ipTM=0.93 tol=10.4
2024-12-04 23:05:55,803 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=76.1 pTM=0.457 ipTM=0.927 tol=11.5
2024-12-04 23:06:12,403 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=75.4 pTM=0.472 ipTM=0.932 tol=16
2024-12-04 23:06:28,978 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.5 pTM=0.464 ipTM=0.93 tol=7.29
2024-12-04 23:06:45,560 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=75.1 pTM=0.449 ipTM=0.933 tol=4.88
2024-12-04 23:07:02,158 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.8 pTM=0.442 ipTM=0.928 tol=6.5
2024-12-04 23:07:18,740 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=75.2 pTM=0.478 ipTM=0.932 tol=5.12
2024-12-04 23:07:35,328 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=75.2 pTM=0.449 ipTM=0.929 tol=3.52
2024-12-04 23:07:51,921 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=75.1 pTM=0.455 ipTM=0.931 tol=4.3
2024-12-04 23:08:08,533 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.8 pTM=0.437 ipTM=0.928 tol=3.01
2024-12-04 23:08:25,136 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=75.1 pTM=0.441 ipTM=0.929 tol=3.04
2024-12-04 23:08:41,720 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=75 pTM=0.441 ipTM=0.93 tol=4.41
2024-12-04 23:08:58,303 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74.6 pTM=0.453 ipTM=0.931 tol=6.99
2024-12-04 23:09:14,917 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=74.8 pTM=0.435 ipTM=0.93 tol=6.65
2024-12-04 23:09:31,512 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=75.2 pTM=0.436 ipTM=0.928 tol=3.13
2024-12-04 23:09:48,143 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=75.8 pTM=0.464 ipTM=0.929 tol=9.15
2024-12-04 23:10:04,721 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=76.3 pTM=0.452 ipTM=0.928 tol=24.3
2024-12-04 23:10:21,277 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=75.8 pTM=0.45 ipTM=0.926 tol=5.72
2024-12-04 23:10:37,867 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=76 pTM=0.454 ipTM=0.928 tol=11.3
2024-12-04 23:10:54,445 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74.8 pTM=0.445 ipTM=0.925 tol=8.63
2024-12-04 23:10:54,446 alphafold2_multimer_v3_model_4_seed_000 took 514.5s (30 recycles)
2024-12-04 23:11:11,463 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.5 pTM=0.424 ipTM=0.926
2024-12-04 23:11:28,048 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=77.1 pTM=0.423 ipTM=0.931 tol=10
2024-12-04 23:11:44,606 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=77 pTM=0.425 ipTM=0.932 tol=6.59
2024-12-04 23:12:01,182 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=77.3 pTM=0.427 ipTM=0.932 tol=6.85
2024-12-04 23:12:17,746 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=76.9 pTM=0.429 ipTM=0.931 tol=2.7
2024-12-04 23:12:34,304 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=77.2 pTM=0.428 ipTM=0.93 tol=2.57
2024-12-04 23:12:50,872 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=77.2 pTM=0.43 ipTM=0.93 tol=2.11
2024-12-04 23:13:07,445 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=77.4 pTM=0.428 ipTM=0.929 tol=1.87
2024-12-04 23:13:24,008 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=77.1 pTM=0.43 ipTM=0.929 tol=1.83
2024-12-04 23:13:40,575 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=77.2 pTM=0.429 ipTM=0.93 tol=1.98
2024-12-04 23:13:57,132 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=77.1 pTM=0.428 ipTM=0.929 tol=1.96
2024-12-04 23:14:13,711 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=77.1 pTM=0.429 ipTM=0.93 tol=2.4
2024-12-04 23:14:30,287 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=77 pTM=0.429 ipTM=0.929 tol=2.67
2024-12-04 23:14:46,852 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.9 pTM=0.442 ipTM=0.932 tol=2.78
2024-12-04 23:15:03,411 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.7 pTM=0.463 ipTM=0.933 tol=2.6
2024-12-04 23:15:20,001 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.8 pTM=0.449 ipTM=0.934 tol=3.73
2024-12-04 23:15:36,604 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76.7 pTM=0.427 ipTM=0.928 tol=6.52
2024-12-04 23:15:53,182 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=76.8 pTM=0.453 ipTM=0.933 tol=6.61
2024-12-04 23:16:09,779 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.6 pTM=0.433 ipTM=0.931 tol=1.82
2024-12-04 23:16:26,387 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=76.5 pTM=0.423 ipTM=0.928 tol=9.55
2024-12-04 23:16:43,004 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=76.9 pTM=0.423 ipTM=0.925 tol=5.45
2024-12-04 23:16:59,603 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=77.1 pTM=0.426 ipTM=0.928 tol=5.98
2024-12-04 23:17:16,197 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=77.2 pTM=0.432 ipTM=0.93 tol=4.31
2024-12-04 23:17:32,769 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=77 pTM=0.428 ipTM=0.927 tol=2.51
2024-12-04 23:17:49,352 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=77.1 pTM=0.43 ipTM=0.928 tol=1.81
2024-12-04 23:18:05,934 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76.9 pTM=0.43 ipTM=0.928 tol=3.06
2024-12-04 23:18:22,515 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=77 pTM=0.429 ipTM=0.928 tol=1.25
2024-12-04 23:18:39,096 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=76.9 pTM=0.436 ipTM=0.929 tol=2.72
2024-12-04 23:18:55,671 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76.9 pTM=0.438 ipTM=0.93 tol=2.66
2024-12-04 23:19:12,231 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76.8 pTM=0.44 ipTM=0.93 tol=1.65
2024-12-04 23:19:28,786 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.7 pTM=0.431 ipTM=0.926 tol=2.3
2024-12-04 23:19:28,786 alphafold2_multimer_v3_model_5_seed_000 took 513.9s (30 recycles)
2024-12-04 23:19:29,273 reranking models by 'multimer' metric
2024-12-04 23:19:34,001 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 23:20:36,273 Relaxation took 67.0s
2024-12-04 23:20:36,273 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=76.8 pTM=0.454 ipTM=0.932
2024-12-04 23:21:30,702 Relaxation took 54.4s
2024-12-04 23:21:30,702 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.6 pTM=0.445 ipTM=0.933
2024-12-04 23:22:29,597 Relaxation took 58.9s
2024-12-04 23:22:29,597 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.8 pTM=0.445 ipTM=0.925
2024-12-04 23:22:56,598 Relaxation took 27.0s
2024-12-04 23:22:56,598 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.7 pTM=0.431 ipTM=0.926
2024-12-04 23:23:40,457 Relaxation took 43.9s
2024-12-04 23:23:40,457 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.6 pTM=0.426 ipTM=0.92
2024-12-04 23:23:42,018 Done