2024-12-04 22:38:15,299 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 22:38:15,807 Running on GPU
2024-12-04 22:38:19,024 Found 6 citations for tools or databases
2024-12-04 22:38:19,024 Query 1/1: ATG16L1_KRT27 (length 1066)
2024-12-04 22:38:19,282 Sleeping for 7s. Reason: PENDING
2024-12-04 22:38:26,685 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:38:36,305 Sleeping for 9s. Reason: RUNNING
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2024-12-04 22:39:01,089 Sleeping for 5s. Reason: RUNNING
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2024-12-04 22:39:26,868 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:39:35,125 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:39:42,390 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:39:48,646 Sleeping for 8s. Reason: RUNNING
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2024-12-04 22:40:07,176 Sleeping for 6s. Reason: RUNNING
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2024-12-04 22:40:21,692 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:40:31,953 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:40:39,208 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:40:51,821 Sleeping for 5s. Reason: PENDING
2024-12-04 22:40:57,074 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:41:06,337 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:41:15,594 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:41:25,856 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:41:35,115 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:41:43,371 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:41:51,629 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:41:59,883 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:42:06,160 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:42:18,363 Setting max_seq=508, max_extra_seq=2048
2024-12-04 22:45:09,600 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.2 pTM=0.368 ipTM=0.201
2024-12-04 22:45:34,724 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60 pTM=0.369 ipTM=0.169 tol=14.9
2024-12-04 22:45:59,923 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.9 pTM=0.368 ipTM=0.243 tol=12
2024-12-04 22:46:25,162 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.7 pTM=0.368 ipTM=0.27 tol=7.74
2024-12-04 22:46:50,455 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62 pTM=0.368 ipTM=0.279 tol=6.05
2024-12-04 22:47:15,796 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.1 pTM=0.368 ipTM=0.281 tol=2.37
2024-12-04 22:47:41,158 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62.3 pTM=0.367 ipTM=0.278 tol=2.62
2024-12-04 22:48:06,539 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.5 pTM=0.367 ipTM=0.279 tol=2.18
2024-12-04 22:48:31,955 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.2 pTM=0.367 ipTM=0.275 tol=2.2
2024-12-04 22:48:57,398 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.2 pTM=0.366 ipTM=0.273 tol=2.68
2024-12-04 22:49:22,819 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.3 pTM=0.364 ipTM=0.275 tol=2.95
2024-12-04 22:49:48,253 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.7 pTM=0.363 ipTM=0.273 tol=4.66
2024-12-04 22:50:13,696 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.2 pTM=0.363 ipTM=0.271 tol=4.39
2024-12-04 22:50:39,124 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.2 pTM=0.364 ipTM=0.269 tol=2.24
2024-12-04 22:51:04,542 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.2 pTM=0.363 ipTM=0.267 tol=1.64
2024-12-04 22:51:29,954 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.4 pTM=0.364 ipTM=0.266 tol=2.75
2024-12-04 22:51:55,389 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.2 pTM=0.363 ipTM=0.268 tol=2.14
2024-12-04 22:52:20,828 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.3 pTM=0.364 ipTM=0.269 tol=2.18
2024-12-04 22:52:46,283 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.9 pTM=0.365 ipTM=0.267 tol=2.45
2024-12-04 22:53:11,725 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.8 pTM=0.365 ipTM=0.265 tol=2.02
2024-12-04 22:53:37,180 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.7 pTM=0.364 ipTM=0.266 tol=3.8
2024-12-04 22:54:02,644 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.2 pTM=0.365 ipTM=0.261 tol=3.6
2024-12-04 22:54:28,111 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.6 pTM=0.364 ipTM=0.271 tol=3.2
2024-12-04 22:54:53,582 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.1 pTM=0.364 ipTM=0.266 tol=3.55
2024-12-04 22:55:19,032 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.3 pTM=0.364 ipTM=0.264 tol=3
2024-12-04 22:55:44,487 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.4 pTM=0.364 ipTM=0.264 tol=2.56
2024-12-04 22:56:09,944 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.4 pTM=0.364 ipTM=0.263 tol=2.5
2024-12-04 22:56:35,420 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.2 pTM=0.364 ipTM=0.26 tol=3.61
2024-12-04 22:57:00,873 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.4 pTM=0.365 ipTM=0.262 tol=3.41
2024-12-04 22:57:26,326 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.4 pTM=0.365 ipTM=0.258 tol=1.63
2024-12-04 22:57:51,759 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.5 pTM=0.363 ipTM=0.262 tol=3.44
2024-12-04 22:57:51,760 alphafold2_multimer_v3_model_1_seed_000 took 927.2s (30 recycles)
2024-12-04 22:58:18,049 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.6 pTM=0.372 ipTM=0.154
2024-12-04 22:58:43,614 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.2 pTM=0.372 ipTM=0.176 tol=29.5
2024-12-04 22:59:09,171 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.8 pTM=0.371 ipTM=0.174 tol=11.5
2024-12-04 22:59:34,759 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61 pTM=0.368 ipTM=0.174 tol=9.3
2024-12-04 23:00:00,288 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59.2 pTM=0.368 ipTM=0.222 tol=28.6
2024-12-04 23:00:25,751 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.4 pTM=0.375 ipTM=0.323 tol=15.8
2024-12-04 23:00:51,225 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.8 pTM=0.376 ipTM=0.317 tol=9.62
2024-12-04 23:01:16,700 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.8 pTM=0.375 ipTM=0.31 tol=6.05
2024-12-04 23:01:42,188 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.4 pTM=0.371 ipTM=0.296 tol=5.35
2024-12-04 23:02:07,660 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.2 pTM=0.372 ipTM=0.303 tol=3.03
2024-12-04 23:02:33,141 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.5 pTM=0.369 ipTM=0.29 tol=5.11
2024-12-04 23:02:58,608 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64 pTM=0.371 ipTM=0.294 tol=3.94
2024-12-04 23:03:24,088 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.9 pTM=0.372 ipTM=0.285 tol=2.95
2024-12-04 23:03:49,628 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.7 pTM=0.37 ipTM=0.25 tol=17.2
2024-12-04 23:04:15,147 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.4 pTM=0.369 ipTM=0.258 tol=7.99
2024-12-04 23:04:40,635 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61 pTM=0.371 ipTM=0.261 tol=7.43
2024-12-04 23:05:06,084 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.8 pTM=0.37 ipTM=0.27 tol=9.98
2024-12-04 23:05:31,554 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.1 pTM=0.37 ipTM=0.249 tol=6.91
2024-12-04 23:05:56,993 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=59.6 pTM=0.373 ipTM=0.244 tol=4.86
2024-12-04 23:06:22,454 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.9 pTM=0.372 ipTM=0.249 tol=29
2024-12-04 23:06:47,930 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.1 pTM=0.372 ipTM=0.275 tol=16.5
2024-12-04 23:07:13,418 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.8 pTM=0.371 ipTM=0.286 tol=9.05
2024-12-04 23:07:38,894 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.8 pTM=0.37 ipTM=0.281 tol=12.5
2024-12-04 23:08:04,347 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.5 pTM=0.371 ipTM=0.291 tol=8.88
2024-12-04 23:08:29,783 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.7 pTM=0.37 ipTM=0.29 tol=8.79
2024-12-04 23:08:55,205 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.6 pTM=0.37 ipTM=0.273 tol=6.16
2024-12-04 23:09:20,644 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.5 pTM=0.369 ipTM=0.303 tol=5.64
2024-12-04 23:09:46,086 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.8 pTM=0.37 ipTM=0.285 tol=5.64
2024-12-04 23:10:11,533 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.3 pTM=0.371 ipTM=0.271 tol=4.79
2024-12-04 23:10:36,979 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.1 pTM=0.37 ipTM=0.296 tol=7.82
2024-12-04 23:11:02,413 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.2 pTM=0.371 ipTM=0.287 tol=6.55
2024-12-04 23:11:02,414 alphafold2_multimer_v3_model_2_seed_000 took 790.0s (30 recycles)
2024-12-04 23:11:28,576 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.6 pTM=0.374 ipTM=0.233
2024-12-04 23:11:54,019 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.1 pTM=0.392 ipTM=0.312 tol=17.7
2024-12-04 23:12:19,433 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.9 pTM=0.385 ipTM=0.316 tol=8.52
2024-12-04 23:12:44,910 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.1 pTM=0.39 ipTM=0.328 tol=21
2024-12-04 23:13:10,317 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.1 pTM=0.396 ipTM=0.344 tol=14.4
2024-12-04 23:13:35,704 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.5 pTM=0.393 ipTM=0.327 tol=4.47
2024-12-04 23:14:01,117 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.4 pTM=0.384 ipTM=0.309 tol=6.02
2024-12-04 23:14:26,520 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.7 pTM=0.387 ipTM=0.3 tol=31.4
2024-12-04 23:14:51,941 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.3 pTM=0.381 ipTM=0.296 tol=5.86
2024-12-04 23:15:17,319 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58.7 pTM=0.384 ipTM=0.289 tol=5
2024-12-04 23:15:42,765 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.6 pTM=0.377 ipTM=0.291 tol=12.1
2024-12-04 23:16:08,208 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.7 pTM=0.378 ipTM=0.271 tol=9.55
2024-12-04 23:16:33,645 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.2 pTM=0.376 ipTM=0.265 tol=4.68
2024-12-04 23:16:59,132 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.1 pTM=0.37 ipTM=0.274 tol=19
2024-12-04 23:17:24,594 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.1 pTM=0.369 ipTM=0.26 tol=9.9
2024-12-04 23:17:49,989 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.7 pTM=0.374 ipTM=0.217 tol=18.3
2024-12-04 23:18:15,357 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.6 pTM=0.375 ipTM=0.249 tol=15.6
2024-12-04 23:18:40,751 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.5 pTM=0.369 ipTM=0.262 tol=17
2024-12-04 23:19:06,142 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.2 pTM=0.373 ipTM=0.22 tol=25.8
2024-12-04 23:19:31,524 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.8 pTM=0.374 ipTM=0.215 tol=14.2
2024-12-04 23:19:56,916 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.7 pTM=0.374 ipTM=0.243 tol=14.3
2024-12-04 23:20:22,366 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.2 pTM=0.372 ipTM=0.219 tol=14
2024-12-04 23:20:47,813 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59 pTM=0.373 ipTM=0.246 tol=13.7
2024-12-04 23:21:13,256 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.6 pTM=0.372 ipTM=0.224 tol=13.9
2024-12-04 23:21:38,707 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.3 pTM=0.371 ipTM=0.245 tol=13.2
2024-12-04 23:22:04,135 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.5 pTM=0.375 ipTM=0.22 tol=13.4
2024-12-04 23:22:29,554 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.2 pTM=0.372 ipTM=0.252 tol=14.9
2024-12-04 23:22:54,988 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56.7 pTM=0.378 ipTM=0.231 tol=13.6
2024-12-04 23:23:20,450 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.4 pTM=0.369 ipTM=0.248 tol=13.9
2024-12-04 23:23:45,915 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56.1 pTM=0.376 ipTM=0.221 tol=15
2024-12-04 23:24:11,368 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58.8 pTM=0.373 ipTM=0.244 tol=13.9
2024-12-04 23:24:11,369 alphafold2_multimer_v3_model_3_seed_000 took 788.3s (30 recycles)
2024-12-04 23:24:37,630 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.9 pTM=0.376 ipTM=0.251
2024-12-04 23:25:03,138 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.3 pTM=0.375 ipTM=0.266 tol=12.4
2024-12-04 23:25:28,652 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.7 pTM=0.371 ipTM=0.236 tol=8.02
2024-12-04 23:25:54,200 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=54.3 pTM=0.368 ipTM=0.217 tol=4.68
2024-12-04 23:26:19,762 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54.1 pTM=0.368 ipTM=0.198 tol=6.38
2024-12-04 23:26:45,420 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.4 pTM=0.366 ipTM=0.184 tol=29.3
2024-12-04 23:27:11,081 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.8 pTM=0.368 ipTM=0.208 tol=27.7
2024-12-04 23:27:36,654 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.6 pTM=0.37 ipTM=0.158 tol=25.2
2024-12-04 23:28:02,260 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.2 pTM=0.367 ipTM=0.184 tol=19
2024-12-04 23:28:27,831 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.5 pTM=0.368 ipTM=0.175 tol=6.93
2024-12-04 23:28:53,403 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.6 pTM=0.367 ipTM=0.179 tol=8.43
2024-12-04 23:29:18,987 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.5 pTM=0.369 ipTM=0.172 tol=5.77
2024-12-04 23:29:44,563 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.6 pTM=0.372 ipTM=0.166 tol=7.12
2024-12-04 23:30:10,113 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.4 pTM=0.368 ipTM=0.203 tol=9.41
2024-12-04 23:30:35,732 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.7 pTM=0.37 ipTM=0.188 tol=5.34
2024-12-04 23:31:01,340 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.8 pTM=0.371 ipTM=0.197 tol=6.43
2024-12-04 23:31:26,966 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.1 pTM=0.369 ipTM=0.14 tol=12.4
2024-12-04 23:31:52,654 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.1 pTM=0.369 ipTM=0.147 tol=9.3
2024-12-04 23:32:18,265 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=54.5 pTM=0.368 ipTM=0.204 tol=19.3
2024-12-04 23:32:43,885 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.9 pTM=0.368 ipTM=0.173 tol=11.5
2024-12-04 23:33:09,509 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.6 pTM=0.368 ipTM=0.168 tol=9.01
2024-12-04 23:33:35,133 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.2 pTM=0.368 ipTM=0.179 tol=6.22
2024-12-04 23:34:00,740 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.6 pTM=0.37 ipTM=0.149 tol=12.9
2024-12-04 23:34:26,399 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.4 pTM=0.371 ipTM=0.137 tol=10.6
2024-12-04 23:34:51,974 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.4 pTM=0.37 ipTM=0.209 tol=16.7
2024-12-04 23:35:17,602 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.5 pTM=0.368 ipTM=0.172 tol=12.4
2024-12-04 23:35:43,265 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.9 pTM=0.371 ipTM=0.14 tol=9.63
2024-12-04 23:36:08,858 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.1 pTM=0.37 ipTM=0.227 tol=15.2
2024-12-04 23:36:34,485 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.9 pTM=0.372 ipTM=0.182 tol=8.21
2024-12-04 23:37:00,069 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.4 pTM=0.376 ipTM=0.216 tol=10.7
2024-12-04 23:37:25,713 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.7 pTM=0.378 ipTM=0.198 tol=11.1
2024-12-04 23:37:25,714 alphafold2_multimer_v3_model_4_seed_000 took 793.6s (30 recycles)
2024-12-04 23:37:51,944 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.5 pTM=0.367 ipTM=0.162
2024-12-04 23:38:17,477 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.9 pTM=0.367 ipTM=0.251 tol=22.8
2024-12-04 23:38:42,972 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.8 pTM=0.365 ipTM=0.291 tol=8.22
2024-12-04 23:39:08,452 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.3 pTM=0.366 ipTM=0.292 tol=7.83
2024-12-04 23:39:33,944 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.6 pTM=0.368 ipTM=0.29 tol=4.82
2024-12-04 23:39:59,442 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.1 pTM=0.367 ipTM=0.295 tol=6.52
2024-12-04 23:40:24,931 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61 pTM=0.366 ipTM=0.289 tol=5.99
2024-12-04 23:40:50,444 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.7 pTM=0.365 ipTM=0.292 tol=5.28
2024-12-04 23:41:15,965 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60.8 pTM=0.365 ipTM=0.29 tol=6.2
2024-12-04 23:41:41,474 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.8 pTM=0.365 ipTM=0.294 tol=5.6
2024-12-04 23:42:06,978 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.7 pTM=0.364 ipTM=0.288 tol=5.91
2024-12-04 23:42:32,529 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.1 pTM=0.366 ipTM=0.292 tol=5.87
2024-12-04 23:42:58,062 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.5 pTM=0.365 ipTM=0.283 tol=3.4
2024-12-04 23:43:23,596 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.8 pTM=0.365 ipTM=0.291 tol=3.1
2024-12-04 23:43:49,129 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60.4 pTM=0.365 ipTM=0.284 tol=3.53
2024-12-04 23:44:14,658 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.8 pTM=0.365 ipTM=0.289 tol=4.87
2024-12-04 23:44:40,195 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.5 pTM=0.365 ipTM=0.287 tol=4.22
2024-12-04 23:45:05,736 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.2 pTM=0.365 ipTM=0.292 tol=4.54
2024-12-04 23:45:31,300 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60.7 pTM=0.365 ipTM=0.286 tol=2.5
2024-12-04 23:45:56,878 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61 pTM=0.365 ipTM=0.293 tol=2.62
2024-12-04 23:46:22,427 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.9 pTM=0.364 ipTM=0.291 tol=5.17
2024-12-04 23:46:47,991 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.1 pTM=0.365 ipTM=0.297 tol=3.26
2024-12-04 23:47:13,527 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.7 pTM=0.364 ipTM=0.291 tol=3.87
2024-12-04 23:47:39,048 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.2 pTM=0.365 ipTM=0.299 tol=4.95
2024-12-04 23:48:04,584 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.1 pTM=0.364 ipTM=0.297 tol=3.37
2024-12-04 23:48:30,121 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.3 pTM=0.365 ipTM=0.301 tol=5.64
2024-12-04 23:48:55,626 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.9 pTM=0.365 ipTM=0.297 tol=3.77
2024-12-04 23:49:21,144 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.8 pTM=0.365 ipTM=0.3 tol=2.31
2024-12-04 23:49:46,634 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=60.8 pTM=0.365 ipTM=0.296 tol=2.29
2024-12-04 23:50:12,111 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61 pTM=0.365 ipTM=0.299 tol=2.23
2024-12-04 23:50:37,558 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.1 pTM=0.365 ipTM=0.299 tol=3
2024-12-04 23:50:37,559 alphafold2_multimer_v3_model_5_seed_000 took 791.1s (30 recycles)
2024-12-04 23:50:38,257 reranking models by 'multimer' metric
2024-12-04 23:50:42,789 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 23:51:59,119 Relaxation took 80.9s
2024-12-04 23:51:59,119 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.1 pTM=0.365 ipTM=0.299
2024-12-04 23:53:08,035 Relaxation took 68.9s
2024-12-04 23:53:08,035 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.2 pTM=0.371 ipTM=0.287
2024-12-04 23:54:58,024 Relaxation took 110.0s
2024-12-04 23:54:58,024 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.5 pTM=0.363 ipTM=0.262
2024-12-04 23:56:13,379 Relaxation took 75.4s
2024-12-04 23:56:13,379 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58.8 pTM=0.373 ipTM=0.244
2024-12-04 23:58:33,834 Relaxation took 140.5s
2024-12-04 23:58:33,834 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.7 pTM=0.378 ipTM=0.198
2024-12-04 23:58:35,936 Done