2024-12-04 22:50:50,692 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 22:50:51,023 Running on GPU
2024-12-04 22:50:56,222 Found 6 citations for tools or databases
2024-12-04 22:50:56,222 Query 1/1: ATG16L1_RAB33A (length 844)
2024-12-04 22:50:56,517 Sleeping for 7s. Reason: PENDING
2024-12-04 22:51:03,776 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:51:11,030 Sleeping for 10s. Reason: RUNNING
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2024-12-04 22:51:36,827 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:51:42,079 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:51:50,335 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:51:56,590 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:52:04,845 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:52:10,108 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:52:18,367 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:52:24,622 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:52:34,881 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:52:40,138 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:52:48,395 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:52:54,651 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:53:00,905 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:53:08,157 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:53:14,409 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:53:21,662 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:53:30,920 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:53:39,175 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:53:51,611 Sleeping for 9s. Reason: PENDING
2024-12-04 22:54:00,867 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:54:09,128 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:54:18,387 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:54:24,641 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:54:30,893 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:54:39,150 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:54:46,402 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:54:52,663 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:55:01,922 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:55:09,179 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:55:15,437 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:55:25,689 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:55:34,949 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:55:47,045 Setting max_seq=508, max_extra_seq=2048
2024-12-04 22:58:08,930 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66 pTM=0.442 ipTM=0.208
2024-12-04 22:58:23,653 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.1 pTM=0.437 ipTM=0.227 tol=18.2
2024-12-04 22:58:38,377 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.8 pTM=0.44 ipTM=0.206 tol=5.18
2024-12-04 22:58:53,116 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.6 pTM=0.438 ipTM=0.218 tol=2.88
2024-12-04 22:59:07,887 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.9 pTM=0.436 ipTM=0.222 tol=2.75
2024-12-04 22:59:22,637 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.6 pTM=0.453 ipTM=0.403 tol=5.2
2024-12-04 22:59:37,368 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.1 pTM=0.45 ipTM=0.608 tol=5.05
2024-12-04 22:59:52,102 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73 pTM=0.441 ipTM=0.593 tol=1.96
2024-12-04 23:00:06,889 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.2 pTM=0.442 ipTM=0.631 tol=2
2024-12-04 23:00:21,656 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.2 pTM=0.441 ipTM=0.614 tol=1.02
2024-12-04 23:00:36,440 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.2 pTM=0.442 ipTM=0.625 tol=0.709
2024-12-04 23:00:51,214 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.9 pTM=0.44 ipTM=0.612 tol=0.769
2024-12-04 23:01:05,990 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73 pTM=0.444 ipTM=0.638 tol=2.01
2024-12-04 23:01:20,770 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73 pTM=0.442 ipTM=0.622 tol=1.46
2024-12-04 23:01:35,557 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.2 pTM=0.444 ipTM=0.636 tol=1.71
2024-12-04 23:01:50,352 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.1 pTM=0.441 ipTM=0.628 tol=1.66
2024-12-04 23:02:05,148 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.2 pTM=0.444 ipTM=0.632 tol=1.63
2024-12-04 23:02:19,916 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.2 pTM=0.442 ipTM=0.631 tol=1.13
2024-12-04 23:02:34,680 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.1 pTM=0.443 ipTM=0.636 tol=0.804
2024-12-04 23:02:49,500 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.4 pTM=0.446 ipTM=0.642 tol=1.52
2024-12-04 23:03:04,301 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.4 pTM=0.447 ipTM=0.649 tol=1.62
2024-12-04 23:03:19,094 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.4 pTM=0.448 ipTM=0.651 tol=0.861
2024-12-04 23:03:33,877 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.4 pTM=0.449 ipTM=0.65 tol=1.12
2024-12-04 23:03:48,634 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.4 pTM=0.451 ipTM=0.645 tol=0.924
2024-12-04 23:04:03,397 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.6 pTM=0.448 ipTM=0.659 tol=1.47
2024-12-04 23:04:18,245 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.6 pTM=0.445 ipTM=0.66 tol=1.34
2024-12-04 23:04:33,051 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.6 pTM=0.46 ipTM=0.654 tol=1.56
2024-12-04 23:04:47,907 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=74.1 pTM=0.473 ipTM=0.654 tol=1.47
2024-12-04 23:05:02,737 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.5 pTM=0.45 ipTM=0.66 tol=1.82
2024-12-04 23:05:17,605 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.8 pTM=0.458 ipTM=0.663 tol=1.21
2024-12-04 23:05:32,455 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.6 pTM=0.448 ipTM=0.663 tol=1.07
2024-12-04 23:05:32,455 alphafold2_multimer_v3_model_1_seed_000 took 579.8s (30 recycles)
2024-12-04 23:05:47,819 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.8 pTM=0.453 ipTM=0.254
2024-12-04 23:06:02,758 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.1 pTM=0.424 ipTM=0.198 tol=15.9
2024-12-04 23:06:17,687 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.8 pTM=0.432 ipTM=0.185 tol=5.36
2024-12-04 23:06:32,616 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.5 pTM=0.432 ipTM=0.19 tol=2.61
2024-12-04 23:06:47,527 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69 pTM=0.43 ipTM=0.187 tol=3.43
2024-12-04 23:07:02,453 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.1 pTM=0.431 ipTM=0.184 tol=7.55
2024-12-04 23:07:17,319 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.9 pTM=0.436 ipTM=0.685 tol=15.2
2024-12-04 23:07:32,150 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.9 pTM=0.451 ipTM=0.621 tol=4.24
2024-12-04 23:07:46,949 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.2 pTM=0.445 ipTM=0.678 tol=3.35
2024-12-04 23:08:01,734 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.3 pTM=0.446 ipTM=0.639 tol=2.6
2024-12-04 23:08:16,582 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73 pTM=0.447 ipTM=0.665 tol=3.11
2024-12-04 23:08:31,413 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.9 pTM=0.445 ipTM=0.629 tol=4.93
2024-12-04 23:08:46,249 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.8 pTM=0.45 ipTM=0.665 tol=5.2
2024-12-04 23:09:01,085 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.1 pTM=0.449 ipTM=0.637 tol=3.19
2024-12-04 23:09:15,898 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.2 pTM=0.445 ipTM=0.654 tol=1.58
2024-12-04 23:09:30,717 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.3 pTM=0.447 ipTM=0.641 tol=3.24
2024-12-04 23:09:45,514 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.1 pTM=0.446 ipTM=0.645 tol=2.31
2024-12-04 23:10:00,352 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.3 pTM=0.45 ipTM=0.633 tol=1.67
2024-12-04 23:10:15,153 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.4 pTM=0.454 ipTM=0.655 tol=2.52
2024-12-04 23:10:29,987 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.6 pTM=0.463 ipTM=0.63 tol=3
2024-12-04 23:10:44,801 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.4 pTM=0.458 ipTM=0.667 tol=1.82
2024-12-04 23:10:59,611 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.4 pTM=0.456 ipTM=0.637 tol=2.7
2024-12-04 23:11:14,448 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.2 pTM=0.446 ipTM=0.663 tol=2.98
2024-12-04 23:11:29,271 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.1 pTM=0.451 ipTM=0.625 tol=3.52
2024-12-04 23:11:44,109 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.4 pTM=0.447 ipTM=0.672 tol=3.69
2024-12-04 23:11:58,929 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.3 pTM=0.448 ipTM=0.638 tol=4
2024-12-04 23:12:13,710 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.1 pTM=0.448 ipTM=0.667 tol=4.43
2024-12-04 23:12:28,524 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.2 pTM=0.448 ipTM=0.629 tol=2.15
2024-12-04 23:12:43,355 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.4 pTM=0.445 ipTM=0.675 tol=1.26
2024-12-04 23:12:58,159 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.2 pTM=0.445 ipTM=0.64 tol=2.34
2024-12-04 23:13:12,981 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.2 pTM=0.445 ipTM=0.669 tol=3.03
2024-12-04 23:13:12,982 alphafold2_multimer_v3_model_2_seed_000 took 460.1s (30 recycles)
2024-12-04 23:13:28,313 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66 pTM=0.443 ipTM=0.184
2024-12-04 23:13:43,226 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.6 pTM=0.432 ipTM=0.175 tol=15.8
2024-12-04 23:13:58,156 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69 pTM=0.432 ipTM=0.164 tol=5.66
2024-12-04 23:14:13,090 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.7 pTM=0.431 ipTM=0.406 tol=14.7
2024-12-04 23:14:27,958 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.9 pTM=0.431 ipTM=0.489 tol=3.29
2024-12-04 23:14:42,782 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.5 pTM=0.436 ipTM=0.551 tol=4.07
2024-12-04 23:14:57,623 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.2 pTM=0.432 ipTM=0.519 tol=4.68
2024-12-04 23:15:12,475 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.8 pTM=0.429 ipTM=0.576 tol=3.43
2024-12-04 23:15:27,336 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.2 pTM=0.435 ipTM=0.53 tol=3.38
2024-12-04 23:15:42,172 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.9 pTM=0.433 ipTM=0.598 tol=2.87
2024-12-04 23:15:57,023 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.6 pTM=0.436 ipTM=0.555 tol=1.21
2024-12-04 23:16:11,879 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.9 pTM=0.433 ipTM=0.598 tol=2.71
2024-12-04 23:16:26,711 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.7 pTM=0.437 ipTM=0.57 tol=3.16
2024-12-04 23:16:41,533 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.9 pTM=0.435 ipTM=0.603 tol=3.55
2024-12-04 23:16:56,356 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.8 pTM=0.438 ipTM=0.567 tol=3.65
2024-12-04 23:17:11,261 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.2 pTM=0.432 ipTM=0.601 tol=3.65
2024-12-04 23:17:26,130 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.5 pTM=0.434 ipTM=0.545 tol=2
2024-12-04 23:17:41,039 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.1 pTM=0.432 ipTM=0.594 tol=2.12
2024-12-04 23:17:55,945 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72.4 pTM=0.435 ipTM=0.539 tol=2.52
2024-12-04 23:18:10,816 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.9 pTM=0.437 ipTM=0.6 tol=1.04
2024-12-04 23:18:25,681 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.6 pTM=0.446 ipTM=0.557 tol=2.21
2024-12-04 23:18:40,546 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.9 pTM=0.457 ipTM=0.601 tol=4.68
2024-12-04 23:18:55,404 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.4 pTM=0.44 ipTM=0.557 tol=3.38
2024-12-04 23:19:10,287 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.9 pTM=0.433 ipTM=0.601 tol=4.14
2024-12-04 23:19:25,148 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.7 pTM=0.432 ipTM=0.545 tol=3.92
2024-12-04 23:19:40,026 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.1 pTM=0.433 ipTM=0.595 tol=3.2
2024-12-04 23:19:54,898 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.6 pTM=0.433 ipTM=0.535 tol=4.37
2024-12-04 23:20:09,768 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.9 pTM=0.431 ipTM=0.592 tol=2.13
2024-12-04 23:20:24,599 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.6 pTM=0.437 ipTM=0.559 tol=2.42
2024-12-04 23:20:39,452 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73 pTM=0.431 ipTM=0.581 tol=2.92
2024-12-04 23:20:54,279 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.3 pTM=0.434 ipTM=0.532 tol=1.53
2024-12-04 23:20:54,280 alphafold2_multimer_v3_model_3_seed_000 took 460.8s (30 recycles)
2024-12-04 23:21:09,644 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.8 pTM=0.431 ipTM=0.17
2024-12-04 23:21:24,546 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.8 pTM=0.44 ipTM=0.195 tol=13.5
2024-12-04 23:21:39,463 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.2 pTM=0.438 ipTM=0.37 tol=5.75
2024-12-04 23:21:54,362 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.9 pTM=0.442 ipTM=0.343 tol=6.56
2024-12-04 23:22:09,263 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.6 pTM=0.438 ipTM=0.256 tol=7.19
2024-12-04 23:22:24,164 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.8 pTM=0.443 ipTM=0.259 tol=7.13
2024-12-04 23:22:39,062 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.1 pTM=0.44 ipTM=0.193 tol=6.42
2024-12-04 23:22:54,015 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67 pTM=0.443 ipTM=0.202 tol=2.88
2024-12-04 23:23:08,901 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.8 pTM=0.443 ipTM=0.206 tol=4.65
2024-12-04 23:23:23,761 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.1 pTM=0.443 ipTM=0.203 tol=7.21
2024-12-04 23:23:38,618 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.6 pTM=0.438 ipTM=0.435 tol=4.36
2024-12-04 23:23:53,454 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.4 pTM=0.44 ipTM=0.387 tol=3.22
2024-12-04 23:24:08,299 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.8 pTM=0.441 ipTM=0.292 tol=14.2
2024-12-04 23:24:23,091 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.6 pTM=0.441 ipTM=0.609 tol=6.33
2024-12-04 23:24:37,881 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.2 pTM=0.442 ipTM=0.589 tol=5.92
2024-12-04 23:24:52,677 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.9 pTM=0.441 ipTM=0.582 tol=2.93
2024-12-04 23:25:07,481 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.6 pTM=0.443 ipTM=0.539 tol=2.92
2024-12-04 23:25:22,276 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.6 pTM=0.439 ipTM=0.553 tol=2.62
2024-12-04 23:25:37,071 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.2 pTM=0.439 ipTM=0.522 tol=4.46
2024-12-04 23:25:51,886 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.6 pTM=0.439 ipTM=0.542 tol=4.29
2024-12-04 23:26:06,704 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.6 pTM=0.438 ipTM=0.527 tol=1.95
2024-12-04 23:26:21,529 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.4 pTM=0.439 ipTM=0.536 tol=1.43
2024-12-04 23:26:36,329 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.5 pTM=0.441 ipTM=0.514 tol=2.45
2024-12-04 23:26:51,124 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.4 pTM=0.443 ipTM=0.521 tol=2.92
2024-12-04 23:27:05,919 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.6 pTM=0.441 ipTM=0.508 tol=1.42
2024-12-04 23:27:20,765 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.8 pTM=0.441 ipTM=0.522 tol=1.03
2024-12-04 23:27:35,601 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.4 pTM=0.442 ipTM=0.497 tol=1.55
2024-12-04 23:27:50,397 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.5 pTM=0.44 ipTM=0.509 tol=1.4
2024-12-04 23:28:05,193 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.1 pTM=0.441 ipTM=0.492 tol=1.36
2024-12-04 23:28:20,006 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.2 pTM=0.439 ipTM=0.494 tol=1.43
2024-12-04 23:28:34,846 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70 pTM=0.437 ipTM=0.472 tol=1.72
2024-12-04 23:28:34,847 alphafold2_multimer_v3_model_4_seed_000 took 460.1s (30 recycles)
2024-12-04 23:28:50,151 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.9 pTM=0.445 ipTM=0.21
2024-12-04 23:29:05,003 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.1 pTM=0.437 ipTM=0.181 tol=6.07
2024-12-04 23:29:19,895 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69 pTM=0.435 ipTM=0.175 tol=3.35
2024-12-04 23:29:34,769 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.1 pTM=0.433 ipTM=0.171 tol=3.94
2024-12-04 23:29:49,686 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.2 pTM=0.433 ipTM=0.179 tol=5.99
2024-12-04 23:30:04,625 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69 pTM=0.433 ipTM=0.173 tol=5.51
2024-12-04 23:30:19,575 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.9 pTM=0.437 ipTM=0.193 tol=5.59
2024-12-04 23:30:34,573 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.7 pTM=0.433 ipTM=0.173 tol=5.87
2024-12-04 23:30:49,533 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.9 pTM=0.435 ipTM=0.181 tol=3.13
2024-12-04 23:31:04,433 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.7 pTM=0.435 ipTM=0.181 tol=5.38
2024-12-04 23:31:19,327 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.5 pTM=0.436 ipTM=0.185 tol=6.01
2024-12-04 23:31:34,197 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.2 pTM=0.435 ipTM=0.18 tol=4.31
2024-12-04 23:31:49,073 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.3 pTM=0.434 ipTM=0.18 tol=4.29
2024-12-04 23:32:03,967 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.4 pTM=0.434 ipTM=0.181 tol=3.57
2024-12-04 23:32:18,833 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.2 pTM=0.436 ipTM=0.183 tol=5.91
2024-12-04 23:32:33,710 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.4 pTM=0.432 ipTM=0.173 tol=4.23
2024-12-04 23:32:48,589 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.2 pTM=0.435 ipTM=0.185 tol=6.36
2024-12-04 23:33:03,459 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.7 pTM=0.433 ipTM=0.175 tol=5.37
2024-12-04 23:33:18,343 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.6 pTM=0.434 ipTM=0.178 tol=2.8
2024-12-04 23:33:33,224 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.8 pTM=0.436 ipTM=0.183 tol=2.78
2024-12-04 23:33:48,166 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.6 pTM=0.435 ipTM=0.189 tol=4.7
2024-12-04 23:34:03,082 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.8 pTM=0.434 ipTM=0.181 tol=3.68
2024-12-04 23:34:17,975 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.9 pTM=0.435 ipTM=0.182 tol=3.37
2024-12-04 23:34:32,856 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.4 pTM=0.436 ipTM=0.182 tol=3.11
2024-12-04 23:34:47,773 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.4 pTM=0.433 ipTM=0.176 tol=2.73
2024-12-04 23:35:02,682 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.9 pTM=0.435 ipTM=0.181 tol=3.26
2024-12-04 23:35:17,567 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.2 pTM=0.433 ipTM=0.176 tol=2.04
2024-12-04 23:35:32,433 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.9 pTM=0.435 ipTM=0.182 tol=3.21
2024-12-04 23:35:47,329 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.8 pTM=0.434 ipTM=0.179 tol=5.01
2024-12-04 23:36:02,239 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69 pTM=0.434 ipTM=0.182 tol=3.59
2024-12-04 23:36:17,111 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69 pTM=0.434 ipTM=0.178 tol=1.14
2024-12-04 23:36:17,112 alphafold2_multimer_v3_model_5_seed_000 took 461.8s (30 recycles)
2024-12-04 23:36:17,569 reranking models by 'multimer' metric
2024-12-04 23:36:18,763 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 23:37:04,957 Relaxation took 47.4s
2024-12-04 23:37:04,957 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.2 pTM=0.445 ipTM=0.669
2024-12-04 23:37:29,941 Relaxation took 25.0s
2024-12-04 23:37:29,941 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.6 pTM=0.448 ipTM=0.663
2024-12-04 23:38:15,407 Relaxation took 45.5s
2024-12-04 23:38:15,408 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.3 pTM=0.434 ipTM=0.532
2024-12-04 23:39:11,144 Relaxation took 55.7s
2024-12-04 23:39:11,145 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70 pTM=0.437 ipTM=0.472
2024-12-04 23:40:04,097 Relaxation took 53.0s
2024-12-04 23:40:04,097 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69 pTM=0.434 ipTM=0.178
2024-12-04 23:40:05,730 Done