2024-12-04 22:51:36,043 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 22:51:37,851 Running on GPU
2024-12-04 22:51:43,549 Found 6 citations for tools or databases
2024-12-04 22:51:43,550 Query 1/1: ATG16L1_RAB33B (length 836)
2024-12-04 22:51:43,858 Sleeping for 5s. Reason: PENDING
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2024-12-04 22:54:33,567 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:54:44,491 Sleeping for 6s. Reason: PENDING
2024-12-04 22:54:50,744 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:54:57,000 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:55:03,259 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:55:11,517 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:55:19,785 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:55:29,047 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:55:35,307 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:55:41,567 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:55:48,826 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:55:58,085 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:56:05,338 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:56:18,801 Setting max_seq=508, max_extra_seq=2048
2024-12-04 22:59:18,911 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65 pTM=0.449 ipTM=0.212
2024-12-04 22:59:36,600 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.9 pTM=0.451 ipTM=0.223 tol=15.6
2024-12-04 22:59:54,320 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.4 pTM=0.452 ipTM=0.228 tol=10.7
2024-12-04 23:00:12,025 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.2 pTM=0.445 ipTM=0.265 tol=7.05
2024-12-04 23:00:29,754 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.9 pTM=0.446 ipTM=0.333 tol=3.57
2024-12-04 23:00:47,511 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.8 pTM=0.45 ipTM=0.224 tol=2.57
2024-12-04 23:01:05,298 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.2 pTM=0.445 ipTM=0.203 tol=6.53
2024-12-04 23:01:23,091 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.1 pTM=0.449 ipTM=0.221 tol=3.14
2024-12-04 23:01:40,897 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.1 pTM=0.449 ipTM=0.218 tol=3.38
2024-12-04 23:01:58,688 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.5 pTM=0.449 ipTM=0.221 tol=6.06
2024-12-04 23:02:16,489 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.8 pTM=0.448 ipTM=0.215 tol=2.84
2024-12-04 23:02:34,278 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.8 pTM=0.449 ipTM=0.217 tol=3.18
2024-12-04 23:02:52,084 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.9 pTM=0.449 ipTM=0.216 tol=2.83
2024-12-04 23:03:09,894 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.6 pTM=0.448 ipTM=0.209 tol=1.79
2024-12-04 23:03:27,699 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.4 pTM=0.448 ipTM=0.211 tol=3.15
2024-12-04 23:03:45,500 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68.7 pTM=0.45 ipTM=0.239 tol=3.96
2024-12-04 23:04:03,302 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.4 pTM=0.447 ipTM=0.209 tol=3.53
2024-12-04 23:04:21,106 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.6 pTM=0.446 ipTM=0.211 tol=3.3
2024-12-04 23:04:38,930 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.1 pTM=0.445 ipTM=0.206 tol=4.92
2024-12-04 23:04:56,738 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.3 pTM=0.445 ipTM=0.202 tol=3.26
2024-12-04 23:05:14,540 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.3 pTM=0.445 ipTM=0.443 tol=6.06
2024-12-04 23:05:32,339 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.1 pTM=0.443 ipTM=0.421 tol=6.03
2024-12-04 23:05:50,137 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.4 pTM=0.443 ipTM=0.2 tol=6.65
2024-12-04 23:06:07,944 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.6 pTM=0.445 ipTM=0.21 tol=8.9
2024-12-04 23:06:25,755 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.2 pTM=0.444 ipTM=0.204 tol=4.14
2024-12-04 23:06:43,562 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.3 pTM=0.448 ipTM=0.308 tol=9.09
2024-12-04 23:07:01,356 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69 pTM=0.449 ipTM=0.415 tol=5.04
2024-12-04 23:07:19,150 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.4 pTM=0.451 ipTM=0.225 tol=3.63
2024-12-04 23:07:36,972 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.6 pTM=0.444 ipTM=0.201 tol=6.28
2024-12-04 23:07:54,776 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.8 pTM=0.444 ipTM=0.206 tol=5.58
2024-12-04 23:08:12,582 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.2 pTM=0.442 ipTM=0.199 tol=3.83
2024-12-04 23:08:12,583 alphafold2_multimer_v3_model_1_seed_000 took 705.3s (30 recycles)
2024-12-04 23:08:31,025 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.6 pTM=0.448 ipTM=0.2
2024-12-04 23:08:48,974 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.447 ipTM=0.214 tol=11.1
2024-12-04 23:09:06,972 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.8 pTM=0.446 ipTM=0.22 tol=7.56
2024-12-04 23:09:24,993 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.1 pTM=0.443 ipTM=0.206 tol=7.81
2024-12-04 23:09:42,993 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.5 pTM=0.444 ipTM=0.216 tol=3.46
2024-12-04 23:10:00,982 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.9 pTM=0.448 ipTM=0.224 tol=4.18
2024-12-04 23:10:18,956 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.6 pTM=0.457 ipTM=0.261 tol=2.55
2024-12-04 23:10:36,924 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.8 pTM=0.45 ipTM=0.229 tol=2.77
2024-12-04 23:10:54,868 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.4 pTM=0.457 ipTM=0.26 tol=2.77
2024-12-04 23:11:12,813 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.2 pTM=0.449 ipTM=0.228 tol=2.74
2024-12-04 23:11:30,761 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.4 pTM=0.458 ipTM=0.265 tol=4.33
2024-12-04 23:11:48,655 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.2 pTM=0.458 ipTM=0.549 tol=4.06
2024-12-04 23:12:06,533 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.1 pTM=0.464 ipTM=0.651 tol=5.36
2024-12-04 23:12:24,424 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.6 pTM=0.455 ipTM=0.621 tol=4.61
2024-12-04 23:12:42,299 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72 pTM=0.454 ipTM=0.63 tol=2.65
2024-12-04 23:13:00,158 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.8 pTM=0.448 ipTM=0.638 tol=3.12
2024-12-04 23:13:18,029 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72.1 pTM=0.461 ipTM=0.633 tol=3.66
2024-12-04 23:13:35,902 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73 pTM=0.45 ipTM=0.661 tol=3.85
2024-12-04 23:13:53,787 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.1 pTM=0.448 ipTM=0.669 tol=2.71
2024-12-04 23:14:11,673 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.1 pTM=0.448 ipTM=0.675 tol=1.09
2024-12-04 23:14:29,540 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.6 pTM=0.458 ipTM=0.684 tol=3.21
2024-12-04 23:14:47,406 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.1 pTM=0.449 ipTM=0.683 tol=2.12
2024-12-04 23:15:05,283 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.8 pTM=0.458 ipTM=0.685 tol=1.81
2024-12-04 23:15:23,155 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.2 pTM=0.452 ipTM=0.686 tol=1.89
2024-12-04 23:15:41,038 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73 pTM=0.451 ipTM=0.688 tol=2.8
2024-12-04 23:15:58,922 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.3 pTM=0.453 ipTM=0.688 tol=1.53
2024-12-04 23:16:16,780 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.5 pTM=0.464 ipTM=0.683 tol=4.64
2024-12-04 23:16:34,646 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.2 pTM=0.45 ipTM=0.689 tol=2.83
2024-12-04 23:16:52,514 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.8 pTM=0.454 ipTM=0.689 tol=1.64
2024-12-04 23:17:10,378 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.1 pTM=0.447 ipTM=0.69 tol=2
2024-12-04 23:17:28,240 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.9 pTM=0.461 ipTM=0.69 tol=3.22
2024-12-04 23:17:28,240 alphafold2_multimer_v3_model_2_seed_000 took 555.1s (30 recycles)
2024-12-04 23:17:46,723 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.9 pTM=0.442 ipTM=0.23
2024-12-04 23:18:04,668 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.2 pTM=0.445 ipTM=0.204 tol=14.4
2024-12-04 23:18:22,629 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.1 pTM=0.443 ipTM=0.191 tol=8.01
2024-12-04 23:18:40,564 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.6 pTM=0.448 ipTM=0.499 tol=12.9
2024-12-04 23:18:58,492 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=69.5 pTM=0.443 ipTM=0.192 tol=4.78
2024-12-04 23:19:16,429 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.5 pTM=0.443 ipTM=0.538 tol=4.99
2024-12-04 23:19:34,382 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=69.4 pTM=0.438 ipTM=0.175 tol=4.94
2024-12-04 23:19:52,333 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.5 pTM=0.438 ipTM=0.315 tol=3.7
2024-12-04 23:20:10,270 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.9 pTM=0.438 ipTM=0.412 tol=4.7
2024-12-04 23:20:28,230 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.4 pTM=0.439 ipTM=0.19 tol=4.95
2024-12-04 23:20:46,170 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.7 pTM=0.441 ipTM=0.416 tol=3.86
2024-12-04 23:21:04,113 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.3 pTM=0.454 ipTM=0.242 tol=3.96
2024-12-04 23:21:22,039 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.4 pTM=0.466 ipTM=0.453 tol=6.89
2024-12-04 23:21:40,000 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.3 pTM=0.451 ipTM=0.227 tol=7.86
2024-12-04 23:21:57,961 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.9 pTM=0.461 ipTM=0.267 tol=5.71
2024-12-04 23:22:15,882 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.6 pTM=0.453 ipTM=0.488 tol=9.56
2024-12-04 23:22:33,821 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.1 pTM=0.438 ipTM=0.186 tol=5.75
2024-12-04 23:22:51,793 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.2 pTM=0.452 ipTM=0.237 tol=5.5
2024-12-04 23:23:09,735 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.8 pTM=0.444 ipTM=0.44 tol=7.93
2024-12-04 23:23:27,709 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.1 pTM=0.442 ipTM=0.199 tol=5.67
2024-12-04 23:23:45,695 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=69.3 pTM=0.443 ipTM=0.2 tol=6.56
2024-12-04 23:24:03,630 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.4 pTM=0.453 ipTM=0.353 tol=7.51
2024-12-04 23:24:21,566 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.4 pTM=0.446 ipTM=0.207 tol=3.85
2024-12-04 23:24:39,530 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.2 pTM=0.443 ipTM=0.202 tol=3.68
2024-12-04 23:24:57,449 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.9 pTM=0.438 ipTM=0.421 tol=7.36
2024-12-04 23:25:15,382 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.4 pTM=0.44 ipTM=0.191 tol=5.98
2024-12-04 23:25:33,295 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.2 pTM=0.435 ipTM=0.387 tol=4.65
2024-12-04 23:25:51,215 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.2 pTM=0.445 ipTM=0.204 tol=4.33
2024-12-04 23:26:09,133 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.4 pTM=0.444 ipTM=0.198 tol=4.46
2024-12-04 23:26:27,013 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.4 pTM=0.45 ipTM=0.377 tol=6.84
2024-12-04 23:26:44,924 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.1 pTM=0.44 ipTM=0.187 tol=5.7
2024-12-04 23:26:44,924 alphafold2_multimer_v3_model_3_seed_000 took 556.1s (30 recycles)
2024-12-04 23:27:03,382 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.3 pTM=0.429 ipTM=0.172
2024-12-04 23:27:21,288 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.2 pTM=0.458 ipTM=0.237 tol=12.5
2024-12-04 23:27:39,181 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.3 pTM=0.454 ipTM=0.237 tol=12.8
2024-12-04 23:27:57,106 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.6 pTM=0.449 ipTM=0.222 tol=12.5
2024-12-04 23:28:14,985 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.4 pTM=0.463 ipTM=0.283 tol=12.8
2024-12-04 23:28:32,896 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.9 pTM=0.448 ipTM=0.224 tol=14.2
2024-12-04 23:28:50,770 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.7 pTM=0.455 ipTM=0.247 tol=5.57
2024-12-04 23:29:08,689 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.6 pTM=0.447 ipTM=0.217 tol=3.58
2024-12-04 23:29:26,601 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.2 pTM=0.451 ipTM=0.24 tol=14
2024-12-04 23:29:44,542 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.8 pTM=0.446 ipTM=0.212 tol=13.5
2024-12-04 23:30:02,476 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.3 pTM=0.444 ipTM=0.205 tol=7.4
2024-12-04 23:30:20,403 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.6 pTM=0.447 ipTM=0.216 tol=5.41
2024-12-04 23:30:38,349 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.1 pTM=0.444 ipTM=0.205 tol=8.33
2024-12-04 23:30:56,290 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.9 pTM=0.447 ipTM=0.217 tol=6.23
2024-12-04 23:31:14,218 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.7 pTM=0.444 ipTM=0.215 tol=9.23
2024-12-04 23:31:32,119 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.9 pTM=0.454 ipTM=0.243 tol=5.79
2024-12-04 23:31:50,044 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.9 pTM=0.443 ipTM=0.206 tol=6.59
2024-12-04 23:32:07,952 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.6 pTM=0.448 ipTM=0.22 tol=4.4
2024-12-04 23:32:25,846 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.1 pTM=0.467 ipTM=0.294 tol=6.7
2024-12-04 23:32:43,759 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.7 pTM=0.449 ipTM=0.228 tol=6.62
2024-12-04 23:33:01,696 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.5 pTM=0.445 ipTM=0.209 tol=6.37
2024-12-04 23:33:19,619 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.6 pTM=0.45 ipTM=0.231 tol=6.76
2024-12-04 23:33:37,532 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.7 pTM=0.444 ipTM=0.214 tol=6.12
2024-12-04 23:33:55,426 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.7 pTM=0.456 ipTM=0.256 tol=7.25
2024-12-04 23:34:13,355 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.8 pTM=0.441 ipTM=0.202 tol=10.3
2024-12-04 23:34:31,259 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.6 pTM=0.443 ipTM=0.208 tol=7.08
2024-12-04 23:34:49,184 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.9 pTM=0.442 ipTM=0.201 tol=8.64
2024-12-04 23:35:07,106 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.4 pTM=0.445 ipTM=0.209 tol=9.09
2024-12-04 23:35:25,033 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66 pTM=0.448 ipTM=0.227 tol=16
2024-12-04 23:35:42,941 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.4 pTM=0.445 ipTM=0.495 tol=11.2
2024-12-04 23:36:00,800 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.6 pTM=0.446 ipTM=0.517 tol=4.26
2024-12-04 23:36:00,801 alphafold2_multimer_v3_model_4_seed_000 took 555.3s (30 recycles)
2024-12-04 23:36:19,245 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.1 pTM=0.442 ipTM=0.192
2024-12-04 23:36:37,174 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.1 pTM=0.449 ipTM=0.206 tol=9.77
2024-12-04 23:36:55,080 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.4 pTM=0.441 ipTM=0.193 tol=9.66
2024-12-04 23:37:13,012 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.5 pTM=0.439 ipTM=0.181 tol=4.53
2024-12-04 23:37:30,893 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.8 pTM=0.434 ipTM=0.172 tol=4.46
2024-12-04 23:37:48,794 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68 pTM=0.438 ipTM=0.18 tol=4.06
2024-12-04 23:38:06,699 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.8 pTM=0.438 ipTM=0.184 tol=2.28
2024-12-04 23:38:24,607 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.3 pTM=0.438 ipTM=0.178 tol=4.05
2024-12-04 23:38:42,534 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.5 pTM=0.438 ipTM=0.182 tol=4.93
2024-12-04 23:39:00,463 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.2 pTM=0.438 ipTM=0.177 tol=4.54
2024-12-04 23:39:18,377 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68 pTM=0.438 ipTM=0.181 tol=3.51
2024-12-04 23:39:36,305 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68 pTM=0.438 ipTM=0.182 tol=2.02
2024-12-04 23:39:54,219 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.1 pTM=0.438 ipTM=0.182 tol=0.865
2024-12-04 23:40:12,141 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.8 pTM=0.44 ipTM=0.188 tol=1.68
2024-12-04 23:40:30,048 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.8 pTM=0.439 ipTM=0.184 tol=2.43
2024-12-04 23:40:47,952 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.8 pTM=0.439 ipTM=0.187 tol=1.68
2024-12-04 23:41:05,847 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.8 pTM=0.438 ipTM=0.186 tol=2.17
2024-12-04 23:41:23,780 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.2 pTM=0.438 ipTM=0.183 tol=7.09
2024-12-04 23:41:41,707 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.9 pTM=0.438 ipTM=0.176 tol=7.84
2024-12-04 23:41:59,633 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.8 pTM=0.437 ipTM=0.18 tol=4.16
2024-12-04 23:42:17,546 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.4 pTM=0.438 ipTM=0.183 tol=2.79
2024-12-04 23:42:35,474 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.9 pTM=0.436 ipTM=0.177 tol=3.54
2024-12-04 23:42:53,409 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.1 pTM=0.437 ipTM=0.176 tol=3.04
2024-12-04 23:43:11,347 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.8 pTM=0.435 ipTM=0.181 tol=3.71
2024-12-04 23:43:29,266 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.4 pTM=0.436 ipTM=0.178 tol=4.36
2024-12-04 23:43:47,206 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.1 pTM=0.435 ipTM=0.179 tol=4.87
2024-12-04 23:44:05,150 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68 pTM=0.435 ipTM=0.173 tol=3.82
2024-12-04 23:44:23,073 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.1 pTM=0.435 ipTM=0.176 tol=7.08
2024-12-04 23:44:41,009 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.2 pTM=0.436 ipTM=0.172 tol=4.94
2024-12-04 23:44:58,943 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.2 pTM=0.434 ipTM=0.175 tol=3.29
2024-12-04 23:45:16,871 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.2 pTM=0.433 ipTM=0.168 tol=3.96
2024-12-04 23:45:16,872 alphafold2_multimer_v3_model_5_seed_000 took 555.5s (30 recycles)
2024-12-04 23:45:17,428 reranking models by 'multimer' metric
2024-12-04 23:45:18,620 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 23:46:23,308 Relaxation took 65.9s
2024-12-04 23:46:23,308 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.9 pTM=0.461 ipTM=0.69
2024-12-04 23:47:28,062 Relaxation took 64.8s
2024-12-04 23:47:28,062 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.6 pTM=0.446 ipTM=0.517
2024-12-04 23:49:02,590 Relaxation took 94.5s
2024-12-04 23:49:02,591 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.2 pTM=0.442 ipTM=0.199
2024-12-04 23:50:29,578 Relaxation took 87.0s
2024-12-04 23:50:29,578 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.1 pTM=0.44 ipTM=0.187
2024-12-04 23:51:19,973 Relaxation took 50.4s
2024-12-04 23:51:19,973 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.2 pTM=0.433 ipTM=0.168
2024-12-04 23:51:21,676 Done