2024-12-04 22:53:20,985 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 22:53:21,378 Running on GPU
2024-12-04 22:53:27,030 Found 6 citations for tools or databases
2024-12-04 22:53:27,030 Query 1/1: ATG16L1_SASS6 (length 1264)
2024-12-04 22:53:27,303 Sleeping for 8s. Reason: PENDING
2024-12-04 22:53:35,558 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:53:41,819 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:53:49,082 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:53:55,339 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:54:00,595 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:54:10,857 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:54:16,266 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:54:25,526 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:54:30,782 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:54:41,044 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:54:50,303 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:54:59,561 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:55:08,827 Sleeping for 6s. Reason: RUNNING
2024-12-04 22:55:15,090 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:55:22,354 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:55:32,615 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:55:39,873 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:55:48,132 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:56:06,607 Sleeping for 7s. Reason: PENDING
2024-12-04 22:56:13,868 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:56:21,132 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:56:26,394 Sleeping for 10s. Reason: RUNNING
2024-12-04 22:56:36,659 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:56:45,933 Sleeping for 8s. Reason: RUNNING
2024-12-04 22:56:54,189 Sleeping for 9s. Reason: RUNNING
2024-12-04 22:57:03,450 Sleeping for 7s. Reason: RUNNING
2024-12-04 22:57:10,709 Sleeping for 5s. Reason: RUNNING
2024-12-04 22:57:19,878 Setting max_seq=508, max_extra_seq=2048
2024-12-04 23:00:21,978 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.2 pTM=0.335 ipTM=0.148
2024-12-04 23:00:59,151 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.6 pTM=0.337 ipTM=0.225 tol=19.9
2024-12-04 23:01:36,337 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.1 pTM=0.351 ipTM=0.425 tol=37.7
2024-12-04 23:02:13,508 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.2 pTM=0.352 ipTM=0.428 tol=8.05
2024-12-04 23:02:50,700 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.7 pTM=0.354 ipTM=0.428 tol=7.61
2024-12-04 23:03:27,877 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.8 pTM=0.352 ipTM=0.426 tol=8.01
2024-12-04 23:04:05,087 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.1 pTM=0.352 ipTM=0.433 tol=7.31
2024-12-04 23:04:42,271 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.4 pTM=0.35 ipTM=0.43 tol=7
2024-12-04 23:05:19,440 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.1 pTM=0.352 ipTM=0.428 tol=4.68
2024-12-04 23:05:56,613 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.7 pTM=0.352 ipTM=0.425 tol=4.78
2024-12-04 23:06:33,768 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.8 pTM=0.352 ipTM=0.419 tol=6.34
2024-12-04 23:07:10,930 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.9 pTM=0.35 ipTM=0.429 tol=7.06
2024-12-04 23:07:48,083 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66 pTM=0.35 ipTM=0.425 tol=4.13
2024-12-04 23:08:25,254 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.1 pTM=0.352 ipTM=0.424 tol=3.48
2024-12-04 23:09:02,604 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.2 pTM=0.35 ipTM=0.427 tol=3
2024-12-04 23:09:40,015 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.8 pTM=0.352 ipTM=0.43 tol=3.21
2024-12-04 23:10:17,384 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.4 pTM=0.352 ipTM=0.428 tol=4.05
2024-12-04 23:10:54,735 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.2 pTM=0.35 ipTM=0.425 tol=5.2
2024-12-04 23:11:32,070 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.2 pTM=0.35 ipTM=0.428 tol=4.04
2024-12-04 23:12:09,346 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.4 pTM=0.352 ipTM=0.425 tol=3.64
2024-12-04 23:12:46,617 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.2 pTM=0.352 ipTM=0.425 tol=6.73
2024-12-04 23:13:23,878 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.3 pTM=0.353 ipTM=0.433 tol=1.74
2024-12-04 23:14:01,134 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.4 pTM=0.352 ipTM=0.425 tol=2.31
2024-12-04 23:14:38,397 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.5 pTM=0.352 ipTM=0.43 tol=2.94
2024-12-04 23:15:15,699 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.6 pTM=0.352 ipTM=0.435 tol=3.95
2024-12-04 23:15:52,979 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.9 pTM=0.353 ipTM=0.431 tol=2.09
2024-12-04 23:16:30,259 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.6 pTM=0.352 ipTM=0.434 tol=4.94
2024-12-04 23:17:07,536 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.4 pTM=0.355 ipTM=0.435 tol=5.67
2024-12-04 23:17:44,809 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.1 pTM=0.354 ipTM=0.432 tol=5.68
2024-12-04 23:18:22,079 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.1 pTM=0.353 ipTM=0.424 tol=3.35
2024-12-04 23:18:59,341 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.5 pTM=0.352 ipTM=0.428 tol=5.03
2024-12-04 23:18:59,342 alphafold2_multimer_v3_model_1_seed_000 took 1291.7s (30 recycles)
2024-12-04 23:19:38,078 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59 pTM=0.341 ipTM=0.147
2024-12-04 23:20:15,602 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.6 pTM=0.341 ipTM=0.158 tol=35
2024-12-04 23:20:53,006 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.9 pTM=0.341 ipTM=0.263 tol=24.3
2024-12-04 23:21:30,368 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.7 pTM=0.342 ipTM=0.277 tol=11.3
2024-12-04 23:22:07,705 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.1 pTM=0.341 ipTM=0.276 tol=5.7
2024-12-04 23:22:45,022 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.2 pTM=0.341 ipTM=0.277 tol=6.79
2024-12-04 23:23:22,351 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67 pTM=0.341 ipTM=0.279 tol=2.98
2024-12-04 23:23:59,664 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.1 pTM=0.34 ipTM=0.28 tol=3.3
2024-12-04 23:24:36,976 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67 pTM=0.34 ipTM=0.278 tol=4.84
2024-12-04 23:25:14,282 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.3 pTM=0.34 ipTM=0.277 tol=3.43
2024-12-04 23:25:51,557 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.1 pTM=0.34 ipTM=0.281 tol=3.44
2024-12-04 23:26:28,834 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.2 pTM=0.34 ipTM=0.278 tol=3.29
2024-12-04 23:27:06,109 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.4 pTM=0.34 ipTM=0.281 tol=3.27
2024-12-04 23:27:43,385 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.1 pTM=0.34 ipTM=0.279 tol=2.55
2024-12-04 23:28:20,655 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.2 pTM=0.338 ipTM=0.281 tol=5.04
2024-12-04 23:28:57,926 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.1 pTM=0.339 ipTM=0.282 tol=3.84
2024-12-04 23:29:35,177 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.1 pTM=0.339 ipTM=0.283 tol=2.83
2024-12-04 23:30:12,440 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.2 pTM=0.339 ipTM=0.286 tol=2.36
2024-12-04 23:30:49,709 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67 pTM=0.339 ipTM=0.282 tol=2.85
2024-12-04 23:31:26,976 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.1 pTM=0.339 ipTM=0.283 tol=2.95
2024-12-04 23:32:04,240 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.1 pTM=0.339 ipTM=0.279 tol=3.13
2024-12-04 23:32:41,494 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.1 pTM=0.338 ipTM=0.283 tol=3.26
2024-12-04 23:33:18,769 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.1 pTM=0.339 ipTM=0.282 tol=4.96
2024-12-04 23:33:56,031 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.4 pTM=0.339 ipTM=0.285 tol=5.09
2024-12-04 23:34:33,304 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.2 pTM=0.339 ipTM=0.283 tol=5.59
2024-12-04 23:35:10,584 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.2 pTM=0.337 ipTM=0.282 tol=4.22
2024-12-04 23:35:47,847 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.3 pTM=0.338 ipTM=0.283 tol=4.34
2024-12-04 23:36:25,112 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.2 pTM=0.339 ipTM=0.282 tol=2.99
2024-12-04 23:37:02,367 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67 pTM=0.339 ipTM=0.285 tol=2.97
2024-12-04 23:37:39,635 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.1 pTM=0.338 ipTM=0.287 tol=2.88
2024-12-04 23:38:16,906 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.1 pTM=0.338 ipTM=0.289 tol=4.68
2024-12-04 23:38:16,907 alphafold2_multimer_v3_model_2_seed_000 took 1156.3s (30 recycles)
2024-12-04 23:38:55,679 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.7 pTM=0.335 ipTM=0.312
2024-12-04 23:39:33,209 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.2 pTM=0.336 ipTM=0.343 tol=35.2
2024-12-04 23:40:10,757 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.2 pTM=0.337 ipTM=0.346 tol=23.7
2024-12-04 23:40:48,275 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.1 pTM=0.338 ipTM=0.352 tol=11.9
2024-12-04 23:41:25,767 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64 pTM=0.337 ipTM=0.35 tol=10.8
2024-12-04 23:42:03,261 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64 pTM=0.337 ipTM=0.347 tol=13.2
2024-12-04 23:42:40,747 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.1 pTM=0.338 ipTM=0.354 tol=11.3
2024-12-04 23:43:18,244 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.1 pTM=0.338 ipTM=0.35 tol=5.45
2024-12-04 23:43:55,753 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.6 pTM=0.338 ipTM=0.349 tol=13.1
2024-12-04 23:44:33,258 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.8 pTM=0.336 ipTM=0.35 tol=6.57
2024-12-04 23:45:10,743 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.6 pTM=0.338 ipTM=0.354 tol=6.43
2024-12-04 23:45:48,229 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.6 pTM=0.339 ipTM=0.354 tol=4.46
2024-12-04 23:46:25,707 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.2 pTM=0.338 ipTM=0.353 tol=10.2
2024-12-04 23:47:03,185 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.1 pTM=0.339 ipTM=0.352 tol=4.48
2024-12-04 23:47:40,646 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.8 pTM=0.339 ipTM=0.355 tol=11
2024-12-04 23:48:18,125 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.9 pTM=0.338 ipTM=0.354 tol=9.59
2024-12-04 23:48:55,594 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.9 pTM=0.339 ipTM=0.354 tol=10.4
2024-12-04 23:49:33,039 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.1 pTM=0.339 ipTM=0.353 tol=5.04
2024-12-04 23:50:10,501 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.4 pTM=0.339 ipTM=0.353 tol=9.38
2024-12-04 23:50:47,994 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.8 pTM=0.338 ipTM=0.351 tol=10.2
2024-12-04 23:51:25,478 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.9 pTM=0.339 ipTM=0.356 tol=12.9
2024-12-04 23:52:02,970 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.4 pTM=0.338 ipTM=0.356 tol=10.7
2024-12-04 23:52:40,464 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.1 pTM=0.34 ipTM=0.358 tol=7.42
2024-12-04 23:53:17,981 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.9 pTM=0.339 ipTM=0.354 tol=8.79
2024-12-04 23:53:55,491 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.2 pTM=0.34 ipTM=0.352 tol=6.64
2024-12-04 23:54:32,999 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.4 pTM=0.341 ipTM=0.355 tol=7.23
2024-12-04 23:55:10,521 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64 pTM=0.341 ipTM=0.356 tol=12.1
2024-12-04 23:55:48,011 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.7 pTM=0.345 ipTM=0.357 tol=9.23
2024-12-04 23:56:25,514 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.8 pTM=0.347 ipTM=0.354 tol=5.56
2024-12-04 23:57:03,015 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64 pTM=0.349 ipTM=0.354 tol=6.04
2024-12-04 23:57:40,501 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.4 pTM=0.355 ipTM=0.356 tol=15.4
2024-12-04 23:57:40,502 alphafold2_multimer_v3_model_3_seed_000 took 1162.4s (30 recycles)
2024-12-04 23:58:19,504 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.5 pTM=0.336 ipTM=0.167
2024-12-04 23:58:57,532 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.2 pTM=0.337 ipTM=0.136 tol=26.5
2024-12-04 23:59:35,593 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55.9 pTM=0.333 ipTM=0.139 tol=35.6
2024-12-05 00:00:13,568 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.3 pTM=0.333 ipTM=0.143 tol=16.4
2024-12-05 00:00:51,501 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.2 pTM=0.331 ipTM=0.134 tol=12.6
2024-12-05 00:01:29,344 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.6 pTM=0.333 ipTM=0.142 tol=12.6
2024-12-05 00:02:07,056 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.5 pTM=0.332 ipTM=0.198 tol=28
2024-12-05 00:02:44,775 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.1 pTM=0.331 ipTM=0.179 tol=13.1
2024-12-05 00:03:22,576 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.1 pTM=0.331 ipTM=0.142 tol=9.91
2024-12-05 00:04:00,459 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.2 pTM=0.331 ipTM=0.139 tol=14.4
2024-12-05 00:04:38,209 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.7 pTM=0.331 ipTM=0.188 tol=25.6
2024-12-05 00:05:16,021 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.5 pTM=0.331 ipTM=0.178 tol=16.2
2024-12-05 00:05:53,743 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.5 pTM=0.332 ipTM=0.156 tol=16.9
2024-12-05 00:06:31,501 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.9 pTM=0.332 ipTM=0.147 tol=27.5
2024-12-05 00:07:09,155 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.9 pTM=0.332 ipTM=0.175 tol=22.9
2024-12-05 00:07:46,876 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.9 pTM=0.334 ipTM=0.167 tol=18.4
2024-12-05 00:08:24,526 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58 pTM=0.333 ipTM=0.181 tol=19.9
2024-12-05 00:09:02,237 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.3 pTM=0.333 ipTM=0.163 tol=17.6
2024-12-05 00:09:39,993 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.1 pTM=0.334 ipTM=0.137 tol=20.2
2024-12-05 00:10:17,668 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.6 pTM=0.334 ipTM=0.141 tol=12.7
2024-12-05 00:10:55,253 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.8 pTM=0.337 ipTM=0.193 tol=24.9
2024-12-05 00:11:32,959 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=55.9 pTM=0.337 ipTM=0.151 tol=16.9
2024-12-05 00:12:10,680 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.2 pTM=0.336 ipTM=0.145 tol=17.6
2024-12-05 00:12:48,324 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=55.6 pTM=0.337 ipTM=0.194 tol=23.3
2024-12-05 00:13:25,924 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=54.9 pTM=0.339 ipTM=0.163 tol=17.2
2024-12-05 00:14:03,524 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.9 pTM=0.339 ipTM=0.201 tol=10.3
2024-12-05 00:14:41,088 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.5 pTM=0.339 ipTM=0.237 tol=14.1
2024-12-05 00:15:18,777 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.3 pTM=0.339 ipTM=0.197 tol=18.6
2024-12-05 00:15:56,413 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.2 pTM=0.34 ipTM=0.182 tol=17.4
2024-12-05 00:16:34,057 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.2 pTM=0.339 ipTM=0.161 tol=10.7
2024-12-05 00:17:11,827 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.8 pTM=0.336 ipTM=0.148 tol=16.3
2024-12-05 00:17:11,829 alphafold2_multimer_v3_model_4_seed_000 took 1170.1s (30 recycles)
2024-12-05 00:17:50,716 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.4 pTM=0.332 ipTM=0.148
2024-12-05 00:18:28,413 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62 pTM=0.333 ipTM=0.176 tol=50.8
2024-12-05 00:19:05,940 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.1 pTM=0.336 ipTM=0.323 tol=27.8
2024-12-05 00:19:43,428 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.9 pTM=0.339 ipTM=0.347 tol=9.76
2024-12-05 00:20:20,884 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.7 pTM=0.345 ipTM=0.348 tol=12
2024-12-05 00:20:58,309 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.5 pTM=0.349 ipTM=0.348 tol=11.3
2024-12-05 00:21:35,703 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.6 pTM=0.358 ipTM=0.353 tol=6.22
2024-12-05 00:22:13,081 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.4 pTM=0.361 ipTM=0.351 tol=4.25
2024-12-05 00:22:50,454 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.4 pTM=0.364 ipTM=0.348 tol=3.98
2024-12-05 00:23:27,827 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.4 pTM=0.364 ipTM=0.35 tol=7.76
2024-12-05 00:24:05,191 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.4 pTM=0.364 ipTM=0.353 tol=4.5
2024-12-05 00:24:42,545 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.6 pTM=0.364 ipTM=0.345 tol=6.51
2024-12-05 00:25:19,902 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.6 pTM=0.363 ipTM=0.344 tol=4.04
2024-12-05 00:25:57,254 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.2 pTM=0.363 ipTM=0.34 tol=6.09
2024-12-05 00:26:34,593 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.6 pTM=0.364 ipTM=0.342 tol=8.47
2024-12-05 00:27:11,941 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.6 pTM=0.363 ipTM=0.348 tol=6.95
2024-12-05 00:27:49,276 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.1 pTM=0.365 ipTM=0.343 tol=6.09
2024-12-05 00:28:26,614 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.4 pTM=0.365 ipTM=0.344 tol=6.78
2024-12-05 00:29:03,959 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.4 pTM=0.365 ipTM=0.34 tol=2.74
2024-12-05 00:29:41,292 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.2 pTM=0.366 ipTM=0.338 tol=2.47
2024-12-05 00:30:18,627 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.2 pTM=0.365 ipTM=0.337 tol=2.5
2024-12-05 00:30:55,952 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.4 pTM=0.364 ipTM=0.336 tol=1.86
2024-12-05 00:31:33,301 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.2 pTM=0.364 ipTM=0.336 tol=2.85
2024-12-05 00:32:10,640 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.2 pTM=0.361 ipTM=0.329 tol=3.13
2024-12-05 00:32:48,000 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.9 pTM=0.361 ipTM=0.317 tol=1.9
2024-12-05 00:33:25,374 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.8 pTM=0.362 ipTM=0.309 tol=3.54
2024-12-05 00:34:02,783 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.5 pTM=0.358 ipTM=0.276 tol=8.07
2024-12-05 00:34:40,251 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.2 pTM=0.353 ipTM=0.284 tol=13.7
2024-12-05 00:35:17,626 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.3 pTM=0.359 ipTM=0.337 tol=21.5
2024-12-05 00:35:54,939 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.3 pTM=0.362 ipTM=0.342 tol=7.83
2024-12-05 00:36:32,278 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.2 pTM=0.363 ipTM=0.336 tol=7.95
2024-12-05 00:36:32,279 alphafold2_multimer_v3_model_5_seed_000 took 1159.2s (30 recycles)
2024-12-05 00:36:33,498 reranking models by 'multimer' metric
2024-12-05 00:36:38,467 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 00:39:01,981 Relaxation took 148.5s
2024-12-05 00:39:01,981 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.5 pTM=0.352 ipTM=0.428
2024-12-05 00:42:05,804 Relaxation took 183.8s
2024-12-05 00:42:05,805 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.4 pTM=0.355 ipTM=0.356
2024-12-05 00:44:53,948 Relaxation took 168.1s
2024-12-05 00:44:53,948 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.2 pTM=0.363 ipTM=0.336
2024-12-05 00:47:54,775 Relaxation took 180.8s
2024-12-05 00:47:54,775 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.1 pTM=0.338 ipTM=0.289
2024-12-05 00:52:01,394 Relaxation took 246.6s
2024-12-05 00:52:01,394 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.8 pTM=0.336 ipTM=0.148
2024-12-05 00:52:04,368 Done