2024-12-04 23:08:57,756 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-04 23:08:58,132 Running on GPU
2024-12-04 23:09:03,630 Found 6 citations for tools or databases
2024-12-04 23:09:03,630 Query 1/1: AURKA_MYCL1 (length 767)
2024-12-04 23:09:03,937 Sleeping for 5s. Reason: PENDING
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2024-12-04 23:10:52,466 Sleeping for 6s. Reason: RUNNING
2024-12-04 23:10:58,718 Sleeping for 5s. Reason: RUNNING
2024-12-04 23:11:03,975 Sleeping for 7s. Reason: RUNNING
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2024-12-04 23:11:18,492 Sleeping for 10s. Reason: RUNNING
2024-12-04 23:11:28,754 Sleeping for 5s. Reason: RUNNING
2024-12-04 23:11:40,165 Sleeping for 10s. Reason: PENDING
2024-12-04 23:11:50,421 Sleeping for 7s. Reason: RUNNING
2024-12-04 23:11:57,679 Sleeping for 5s. Reason: RUNNING
2024-12-04 23:12:02,933 Sleeping for 8s. Reason: RUNNING
2024-12-04 23:12:11,192 Sleeping for 10s. Reason: RUNNING
2024-12-04 23:12:21,453 Sleeping for 7s. Reason: RUNNING
2024-12-04 23:12:28,712 Sleeping for 5s. Reason: RUNNING
2024-12-04 23:12:33,970 Sleeping for 9s. Reason: RUNNING
2024-12-04 23:12:43,231 Sleeping for 8s. Reason: RUNNING
2024-12-04 23:12:51,489 Sleeping for 8s. Reason: RUNNING
2024-12-04 23:12:59,755 Sleeping for 7s. Reason: RUNNING
2024-12-04 23:13:07,020 Sleeping for 8s. Reason: RUNNING
2024-12-04 23:13:15,277 Sleeping for 8s. Reason: RUNNING
2024-12-04 23:13:23,539 Sleeping for 10s. Reason: RUNNING
2024-12-04 23:13:37,475 Setting max_seq=508, max_extra_seq=2048
2024-12-04 23:17:10,339 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.8 pTM=0.44 ipTM=0.203
2024-12-04 23:17:25,786 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=48.4 pTM=0.465 ipTM=0.34 tol=12.7
2024-12-04 23:17:41,265 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.2 pTM=0.458 ipTM=0.237 tol=7.17
2024-12-04 23:17:56,772 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.5 pTM=0.459 ipTM=0.319 tol=5.52
2024-12-04 23:18:12,284 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48.7 pTM=0.464 ipTM=0.275 tol=2.85
2024-12-04 23:18:27,823 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=49.1 pTM=0.462 ipTM=0.342 tol=4.89
2024-12-04 23:18:43,372 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.2 pTM=0.462 ipTM=0.277 tol=5.57
2024-12-04 23:18:58,945 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.1 pTM=0.46 ipTM=0.35 tol=6.96
2024-12-04 23:19:14,516 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=49.1 pTM=0.466 ipTM=0.332 tol=6.56
2024-12-04 23:19:30,105 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.9 pTM=0.461 ipTM=0.346 tol=4.94
2024-12-04 23:19:45,709 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=49.1 pTM=0.46 ipTM=0.264 tol=2.05
2024-12-04 23:20:01,313 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.1 pTM=0.464 ipTM=0.371 tol=1.97
2024-12-04 23:20:16,929 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.8 pTM=0.463 ipTM=0.271 tol=4.43
2024-12-04 23:20:32,553 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.4 pTM=0.466 ipTM=0.392 tol=5.07
2024-12-04 23:20:48,180 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.2 pTM=0.466 ipTM=0.33 tol=4.72
2024-12-04 23:21:03,820 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.4 pTM=0.465 ipTM=0.362 tol=4.14
2024-12-04 23:21:19,441 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49 pTM=0.463 ipTM=0.293 tol=4.41
2024-12-04 23:21:35,075 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.3 pTM=0.464 ipTM=0.359 tol=4.44
2024-12-04 23:21:50,713 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.8 pTM=0.463 ipTM=0.266 tol=4.37
2024-12-04 23:22:06,351 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.8 pTM=0.462 ipTM=0.32 tol=1.74
2024-12-04 23:22:21,983 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49 pTM=0.466 ipTM=0.317 tol=2.01
2024-12-04 23:22:37,634 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.7 pTM=0.462 ipTM=0.374 tol=2.54
2024-12-04 23:22:53,261 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.6 pTM=0.464 ipTM=0.26 tol=4.09
2024-12-04 23:23:08,895 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.2 pTM=0.465 ipTM=0.329 tol=1.88
2024-12-04 23:23:24,536 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.7 pTM=0.464 ipTM=0.3 tol=4.31
2024-12-04 23:23:40,162 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.9 pTM=0.461 ipTM=0.289 tol=5.18
2024-12-04 23:23:55,794 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.8 pTM=0.46 ipTM=0.276 tol=1.76
2024-12-04 23:24:11,418 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48.7 pTM=0.46 ipTM=0.237 tol=1.67
2024-12-04 23:24:27,044 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48.7 pTM=0.463 ipTM=0.256 tol=1.86
2024-12-04 23:24:42,674 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.7 pTM=0.466 ipTM=0.273 tol=4.07
2024-12-04 23:24:58,297 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.8 pTM=0.461 ipTM=0.269 tol=2.04
2024-12-04 23:24:58,298 alphafold2_multimer_v3_model_1_seed_000 took 673.3s (30 recycles)
2024-12-04 23:25:14,415 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.8 pTM=0.451 ipTM=0.237
2024-12-04 23:25:30,082 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.3 pTM=0.453 ipTM=0.31 tol=11.2
2024-12-04 23:25:45,741 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.5 pTM=0.449 ipTM=0.249 tol=6.34
2024-12-04 23:26:01,402 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.8 pTM=0.451 ipTM=0.36 tol=4.51
2024-12-04 23:26:17,056 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.9 pTM=0.449 ipTM=0.258 tol=4.9
2024-12-04 23:26:32,707 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=49.6 pTM=0.444 ipTM=0.214 tol=3.69
2024-12-04 23:26:48,353 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.8 pTM=0.448 ipTM=0.318 tol=3.73
2024-12-04 23:27:03,994 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.1 pTM=0.451 ipTM=0.281 tol=2.07
2024-12-04 23:27:19,636 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.7 pTM=0.447 ipTM=0.239 tol=2.72
2024-12-04 23:27:35,273 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49.8 pTM=0.451 ipTM=0.359 tol=6.8
2024-12-04 23:27:50,898 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50 pTM=0.448 ipTM=0.31 tol=6.07
2024-12-04 23:28:06,529 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.5 pTM=0.447 ipTM=0.262 tol=1.9
2024-12-04 23:28:22,155 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49.7 pTM=0.45 ipTM=0.36 tol=1.73
2024-12-04 23:28:37,767 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=49.8 pTM=0.448 ipTM=0.326 tol=2.15
2024-12-04 23:28:53,394 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49.5 pTM=0.449 ipTM=0.327 tol=2.14
2024-12-04 23:29:09,022 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.7 pTM=0.45 ipTM=0.333 tol=1.91
2024-12-04 23:29:24,651 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.6 pTM=0.446 ipTM=0.313 tol=2.25
2024-12-04 23:29:40,261 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.9 pTM=0.448 ipTM=0.342 tol=1.61
2024-12-04 23:29:55,885 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.3 pTM=0.446 ipTM=0.316 tol=1.76
2024-12-04 23:30:11,498 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.8 pTM=0.45 ipTM=0.299 tol=1.58
2024-12-04 23:30:27,132 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.5 pTM=0.448 ipTM=0.348 tol=1.78
2024-12-04 23:30:42,751 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=49.4 pTM=0.447 ipTM=0.291 tol=1.9
2024-12-04 23:30:58,376 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49 pTM=0.446 ipTM=0.226 tol=2.86
2024-12-04 23:31:14,009 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49.4 pTM=0.445 ipTM=0.272 tol=2.6
2024-12-04 23:31:29,644 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=49.2 pTM=0.445 ipTM=0.28 tol=2.2
2024-12-04 23:31:45,269 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=49.6 pTM=0.445 ipTM=0.344 tol=1.69
2024-12-04 23:32:00,872 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=49.3 pTM=0.443 ipTM=0.283 tol=1.79
2024-12-04 23:32:16,497 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.4 pTM=0.445 ipTM=0.261 tol=2.57
2024-12-04 23:32:32,098 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49.1 pTM=0.444 ipTM=0.278 tol=2.2
2024-12-04 23:32:47,726 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.2 pTM=0.447 ipTM=0.234 tol=4.02
2024-12-04 23:33:03,340 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49.1 pTM=0.446 ipTM=0.314 tol=2.32
2024-12-04 23:33:03,340 alphafold2_multimer_v3_model_2_seed_000 took 484.6s (30 recycles)
2024-12-04 23:33:19,484 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49.2 pTM=0.454 ipTM=0.387
2024-12-04 23:33:35,155 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.5 pTM=0.441 ipTM=0.305 tol=16.8
2024-12-04 23:33:50,837 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.4 pTM=0.436 ipTM=0.271 tol=8.37
2024-12-04 23:34:06,520 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=50 pTM=0.45 ipTM=0.382 tol=11.9
2024-12-04 23:34:22,198 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.7 pTM=0.437 ipTM=0.231 tol=6.91
2024-12-04 23:34:37,882 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=50 pTM=0.444 ipTM=0.326 tol=4.97
2024-12-04 23:34:53,576 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.8 pTM=0.44 ipTM=0.255 tol=4.6
2024-12-04 23:35:09,262 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.8 pTM=0.443 ipTM=0.269 tol=3.7
2024-12-04 23:35:24,949 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49.8 pTM=0.441 ipTM=0.251 tol=4.86
2024-12-04 23:35:40,623 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.9 pTM=0.44 ipTM=0.226 tol=2.97
2024-12-04 23:35:56,318 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=50.1 pTM=0.445 ipTM=0.299 tol=1.77
2024-12-04 23:36:12,012 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.9 pTM=0.441 ipTM=0.246 tol=3.71
2024-12-04 23:36:27,702 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=50.2 pTM=0.449 ipTM=0.316 tol=1.86
2024-12-04 23:36:43,385 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=50.2 pTM=0.443 ipTM=0.257 tol=2.38
2024-12-04 23:36:59,082 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=50.2 pTM=0.445 ipTM=0.283 tol=3.35
2024-12-04 23:37:14,767 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.3 pTM=0.445 ipTM=0.262 tol=2.3
2024-12-04 23:37:30,451 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.1 pTM=0.442 ipTM=0.227 tol=2.25
2024-12-04 23:37:46,120 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.4 pTM=0.449 ipTM=0.3 tol=1.54
2024-12-04 23:38:01,790 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.1 pTM=0.443 ipTM=0.311 tol=1.57
2024-12-04 23:38:17,476 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50.3 pTM=0.445 ipTM=0.265 tol=1.91
2024-12-04 23:38:33,172 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.4 pTM=0.448 ipTM=0.334 tol=3.34
2024-12-04 23:38:48,858 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.3 pTM=0.444 ipTM=0.254 tol=2.96
2024-12-04 23:39:04,565 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50.1 pTM=0.447 ipTM=0.301 tol=2.78
2024-12-04 23:39:20,261 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.4 pTM=0.446 ipTM=0.266 tol=2.86
2024-12-04 23:39:35,961 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=50.4 pTM=0.45 ipTM=0.34 tol=5.16
2024-12-04 23:39:51,652 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.3 pTM=0.448 ipTM=0.276 tol=3.97
2024-12-04 23:40:07,341 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.9 pTM=0.442 ipTM=0.235 tol=6.12
2024-12-04 23:40:23,045 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.1 pTM=0.443 ipTM=0.285 tol=4.86
2024-12-04 23:40:38,733 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.1 pTM=0.443 ipTM=0.283 tol=2.89
2024-12-04 23:40:54,429 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50.3 pTM=0.448 ipTM=0.278 tol=2.79
2024-12-04 23:41:10,124 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.1 pTM=0.444 ipTM=0.288 tol=6.5
2024-12-04 23:41:10,125 alphafold2_multimer_v3_model_3_seed_000 took 486.3s (30 recycles)
2024-12-04 23:41:26,256 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48 pTM=0.466 ipTM=0.388
2024-12-04 23:41:41,918 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.2 pTM=0.456 ipTM=0.266 tol=9.86
2024-12-04 23:41:57,599 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.2 pTM=0.471 ipTM=0.45 tol=11.8
2024-12-04 23:42:13,293 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=49.3 pTM=0.451 ipTM=0.298 tol=10.1
2024-12-04 23:42:28,986 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.1 pTM=0.449 ipTM=0.229 tol=6.59
2024-12-04 23:42:44,676 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.4 pTM=0.452 ipTM=0.257 tol=6.09
2024-12-04 23:43:00,359 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49 pTM=0.447 ipTM=0.252 tol=3.24
2024-12-04 23:43:16,055 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.4 pTM=0.452 ipTM=0.323 tol=2.1
2024-12-04 23:43:31,752 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=49.2 pTM=0.449 ipTM=0.302 tol=2.41
2024-12-04 23:43:47,462 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.2 pTM=0.45 ipTM=0.297 tol=2.74
2024-12-04 23:44:03,152 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.3 pTM=0.453 ipTM=0.326 tol=3.14
2024-12-04 23:44:18,847 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49 pTM=0.451 ipTM=0.294 tol=2.42
2024-12-04 23:44:34,533 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.8 pTM=0.45 ipTM=0.275 tol=2.89
2024-12-04 23:44:50,226 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.7 pTM=0.456 ipTM=0.359 tol=3.32
2024-12-04 23:45:05,922 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.3 pTM=0.449 ipTM=0.308 tol=2.31
2024-12-04 23:45:21,619 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.4 pTM=0.456 ipTM=0.303 tol=1.67
2024-12-04 23:45:37,321 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.5 pTM=0.454 ipTM=0.358 tol=2.66
2024-12-04 23:45:53,014 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.4 pTM=0.452 ipTM=0.324 tol=1.71
2024-12-04 23:46:08,700 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.2 pTM=0.457 ipTM=0.369 tol=2.1
2024-12-04 23:46:24,397 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.2 pTM=0.451 ipTM=0.308 tol=1.97
2024-12-04 23:46:40,096 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.4 pTM=0.457 ipTM=0.371 tol=2.55
2024-12-04 23:46:55,797 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.1 pTM=0.451 ipTM=0.283 tol=2.05
2024-12-04 23:47:11,493 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.7 pTM=0.451 ipTM=0.326 tol=2.68
2024-12-04 23:47:27,183 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.2 pTM=0.455 ipTM=0.315 tol=2.28
2024-12-04 23:47:42,883 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.3 pTM=0.455 ipTM=0.327 tol=1.44
2024-12-04 23:47:58,564 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.3 pTM=0.455 ipTM=0.342 tol=2.1
2024-12-04 23:48:14,251 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.5 pTM=0.458 ipTM=0.355 tol=1.85
2024-12-04 23:48:29,959 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=49.3 pTM=0.449 ipTM=0.328 tol=2.02
2024-12-04 23:48:45,643 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49.2 pTM=0.456 ipTM=0.348 tol=2.4
2024-12-04 23:49:01,338 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.3 pTM=0.451 ipTM=0.343 tol=2.22
2024-12-04 23:49:17,030 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49.2 pTM=0.454 ipTM=0.34 tol=3.02
2024-12-04 23:49:17,031 alphafold2_multimer_v3_model_4_seed_000 took 486.4s (30 recycles)
2024-12-04 23:49:33,200 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48 pTM=0.447 ipTM=0.3
2024-12-04 23:49:48,893 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.1 pTM=0.459 ipTM=0.246 tol=16
2024-12-04 23:50:04,608 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=49.3 pTM=0.449 ipTM=0.299 tol=6.72
2024-12-04 23:50:20,327 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.1 pTM=0.453 ipTM=0.435 tol=4.81
2024-12-04 23:50:36,044 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=49.8 pTM=0.449 ipTM=0.258 tol=4.44
2024-12-04 23:50:51,754 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50 pTM=0.448 ipTM=0.347 tol=5.59
2024-12-04 23:51:07,478 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.8 pTM=0.447 ipTM=0.265 tol=4.41
2024-12-04 23:51:23,199 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.8 pTM=0.447 ipTM=0.322 tol=3.17
2024-12-04 23:51:38,920 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.7 pTM=0.445 ipTM=0.256 tol=3.2
2024-12-04 23:51:54,629 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.8 pTM=0.446 ipTM=0.289 tol=3.12
2024-12-04 23:52:10,356 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.8 pTM=0.446 ipTM=0.229 tol=4.04
2024-12-04 23:52:26,086 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50.1 pTM=0.449 ipTM=0.352 tol=2.97
2024-12-04 23:52:41,810 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.7 pTM=0.447 ipTM=0.309 tol=3.21
2024-12-04 23:52:57,535 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.3 pTM=0.452 ipTM=0.411 tol=3.54
2024-12-04 23:53:13,256 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.7 pTM=0.444 ipTM=0.237 tol=4.07
2024-12-04 23:53:28,983 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=50 pTM=0.448 ipTM=0.352 tol=5.09
2024-12-04 23:53:44,705 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.9 pTM=0.45 ipTM=0.268 tol=3.18
2024-12-04 23:54:00,417 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.2 pTM=0.453 ipTM=0.431 tol=4.54
2024-12-04 23:54:16,142 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=49.7 pTM=0.447 ipTM=0.288 tol=4.81
2024-12-04 23:54:31,860 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49.9 pTM=0.449 ipTM=0.382 tol=3.07
2024-12-04 23:54:47,591 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.6 pTM=0.447 ipTM=0.25 tol=5.25
2024-12-04 23:55:03,311 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=49.8 pTM=0.451 ipTM=0.307 tol=6.09
2024-12-04 23:55:19,020 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.3 pTM=0.448 ipTM=0.291 tol=6.76
2024-12-04 23:55:34,724 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=49.8 pTM=0.451 ipTM=0.336 tol=2.14
2024-12-04 23:55:50,431 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.7 pTM=0.449 ipTM=0.235 tol=2.89
2024-12-04 23:56:06,131 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=49.7 pTM=0.453 ipTM=0.326 tol=5.27
2024-12-04 23:56:21,829 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.6 pTM=0.444 ipTM=0.231 tol=4.62
2024-12-04 23:56:37,542 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.2 pTM=0.457 ipTM=0.419 tol=5.16
2024-12-04 23:56:53,251 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=49.6 pTM=0.443 ipTM=0.258 tol=6.57
2024-12-04 23:57:08,960 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.2 pTM=0.454 ipTM=0.391 tol=4.82
2024-12-04 23:57:24,672 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.7 pTM=0.445 ipTM=0.242 tol=4.46
2024-12-04 23:57:24,673 alphafold2_multimer_v3_model_5_seed_000 took 487.2s (30 recycles)
2024-12-04 23:57:25,153 reranking models by 'multimer' metric
2024-12-04 23:57:30,108 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-04 23:58:46,725 Relaxation took 81.6s
2024-12-04 23:58:46,726 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49.2 pTM=0.454 ipTM=0.34
2024-12-05 00:00:32,452 Relaxation took 105.7s
2024-12-05 00:00:32,452 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49.1 pTM=0.446 ipTM=0.314
2024-12-05 00:01:47,620 Relaxation took 75.2s
2024-12-05 00:01:47,620 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.1 pTM=0.444 ipTM=0.288
2024-12-05 00:02:55,687 Relaxation took 68.1s
2024-12-05 00:02:55,687 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.8 pTM=0.461 ipTM=0.269
2024-12-05 00:04:01,043 Relaxation took 65.4s
2024-12-05 00:04:01,043 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.7 pTM=0.445 ipTM=0.242
2024-12-05 00:04:02,789 Done