2024-12-05 00:04:52,836 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 00:04:53,165 Running on GPU
2024-12-05 00:04:58,672 Found 6 citations for tools or databases
2024-12-05 00:04:58,672 Query 1/1: BIRC2_KRTAP13-2 (length 793)
2024-12-05 00:04:58,988 Sleeping for 7s. Reason: PENDING
2024-12-05 00:05:06,244 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:05:11,504 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:05:19,760 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:05:25,018 Sleeping for 9s. Reason: RUNNING
2024-12-05 00:05:34,439 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:05:44,704 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:05:50,963 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:05:59,221 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:06:04,477 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:06:14,736 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:06:23,008 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:06:33,268 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:06:41,521 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:06:46,771 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:06:57,000 Sleeping for 8s. Reason: PENDING
2024-12-05 00:07:05,258 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:07:10,511 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:07:15,769 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:07:26,030 Sleeping for 7s. Reason: RUNNING
2024-12-05 00:07:33,284 Sleeping for 7s. Reason: RUNNING
2024-12-05 00:07:43,608 Setting max_seq=508, max_extra_seq=2048
2024-12-05 00:10:42,007 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.4 pTM=0.266 ipTM=0.164
2024-12-05 00:10:54,966 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.1 pTM=0.266 ipTM=0.229 tol=12.5
2024-12-05 00:11:07,968 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.8 pTM=0.273 ipTM=0.163 tol=6.77
2024-12-05 00:11:21,021 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.1 pTM=0.265 ipTM=0.154 tol=5.27
2024-12-05 00:11:34,095 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=52.4 pTM=0.271 ipTM=0.192 tol=3.44
2024-12-05 00:11:47,203 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=52.7 pTM=0.27 ipTM=0.173 tol=2.02
2024-12-05 00:12:00,321 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.3 pTM=0.269 ipTM=0.171 tol=1.89
2024-12-05 00:12:13,466 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.9 pTM=0.274 ipTM=0.184 tol=1.25
2024-12-05 00:12:26,623 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.6 pTM=0.27 ipTM=0.17 tol=2.04
2024-12-05 00:12:39,801 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.1 pTM=0.273 ipTM=0.189 tol=1.92
2024-12-05 00:12:52,995 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.6 pTM=0.272 ipTM=0.172 tol=1.62
2024-12-05 00:13:06,184 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.8 pTM=0.271 ipTM=0.169 tol=1.88
2024-12-05 00:13:19,381 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.7 pTM=0.273 ipTM=0.185 tol=1.47
2024-12-05 00:13:32,583 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.8 pTM=0.271 ipTM=0.169 tol=1.37
2024-12-05 00:13:45,794 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.7 pTM=0.273 ipTM=0.179 tol=1.36
2024-12-05 00:13:59,008 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.6 pTM=0.272 ipTM=0.17 tol=1.24
2024-12-05 00:14:12,228 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.5 pTM=0.271 ipTM=0.172 tol=1.37
2024-12-05 00:14:25,426 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.5 pTM=0.271 ipTM=0.167 tol=1.27
2024-12-05 00:14:38,641 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.6 pTM=0.271 ipTM=0.169 tol=1.57
2024-12-05 00:14:51,857 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.7 pTM=0.272 ipTM=0.179 tol=1.29
2024-12-05 00:15:05,060 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.4 pTM=0.271 ipTM=0.166 tol=1.64
2024-12-05 00:15:18,277 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.3 pTM=0.274 ipTM=0.175 tol=1.41
2024-12-05 00:15:31,499 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.2 pTM=0.273 ipTM=0.168 tol=2
2024-12-05 00:15:44,718 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.2 pTM=0.273 ipTM=0.168 tol=1.16
2024-12-05 00:15:57,942 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.5 pTM=0.273 ipTM=0.166 tol=1.59
2024-12-05 00:16:11,158 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.5 pTM=0.272 ipTM=0.168 tol=2.02
2024-12-05 00:16:24,388 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.7 pTM=0.275 ipTM=0.177 tol=2.19
2024-12-05 00:16:37,615 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.4 pTM=0.273 ipTM=0.165 tol=2.04
2024-12-05 00:16:50,836 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.6 pTM=0.276 ipTM=0.169 tol=2.27
2024-12-05 00:17:04,069 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.2 pTM=0.274 ipTM=0.161 tol=1.33
2024-12-05 00:17:17,300 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.6 pTM=0.275 ipTM=0.165 tol=1.24
2024-12-05 00:17:17,301 alphafold2_multimer_v3_model_1_seed_000 took 567.7s (30 recycles)
2024-12-05 00:17:30,958 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.9 pTM=0.325 ipTM=0.169
2024-12-05 00:17:44,188 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.8 pTM=0.264 ipTM=0.154 tol=7.52
2024-12-05 00:17:57,426 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50.8 pTM=0.261 ipTM=0.162 tol=6.74
2024-12-05 00:18:10,669 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52.6 pTM=0.267 ipTM=0.2 tol=5.52
2024-12-05 00:18:23,933 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.3 pTM=0.268 ipTM=0.189 tol=3.65
2024-12-05 00:18:37,180 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.5 pTM=0.267 ipTM=0.198 tol=3.69
2024-12-05 00:18:50,416 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.4 pTM=0.268 ipTM=0.193 tol=3.69
2024-12-05 00:19:03,649 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.6 pTM=0.271 ipTM=0.198 tol=2.49
2024-12-05 00:19:16,892 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.9 pTM=0.269 ipTM=0.197 tol=2.39
2024-12-05 00:19:30,151 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.3 pTM=0.268 ipTM=0.197 tol=1.9
2024-12-05 00:19:43,398 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.1 pTM=0.269 ipTM=0.2 tol=2.04
2024-12-05 00:19:56,653 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53 pTM=0.269 ipTM=0.197 tol=1.29
2024-12-05 00:20:09,900 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.3 pTM=0.267 ipTM=0.2 tol=2.74
2024-12-05 00:20:23,148 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.6 pTM=0.269 ipTM=0.198 tol=3.24
2024-12-05 00:20:36,406 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.8 pTM=0.275 ipTM=0.206 tol=2.03
2024-12-05 00:20:49,643 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52.5 pTM=0.27 ipTM=0.201 tol=3.53
2024-12-05 00:21:02,898 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.9 pTM=0.275 ipTM=0.209 tol=3.02
2024-12-05 00:21:16,183 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53 pTM=0.281 ipTM=0.208 tol=2.46
2024-12-05 00:21:29,480 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53 pTM=0.277 ipTM=0.21 tol=2.85
2024-12-05 00:21:42,775 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.2 pTM=0.275 ipTM=0.21 tol=2.56
2024-12-05 00:21:56,050 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.2 pTM=0.281 ipTM=0.214 tol=1.89
2024-12-05 00:22:09,351 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.6 pTM=0.277 ipTM=0.21 tol=2.64
2024-12-05 00:22:22,641 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.1 pTM=0.284 ipTM=0.212 tol=2.21
2024-12-05 00:22:35,924 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.4 pTM=0.285 ipTM=0.211 tol=3.18
2024-12-05 00:22:49,232 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.5 pTM=0.28 ipTM=0.209 tol=3.22
2024-12-05 00:23:02,524 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.2 pTM=0.288 ipTM=0.212 tol=2.24
2024-12-05 00:23:15,798 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.4 pTM=0.292 ipTM=0.213 tol=1.5
2024-12-05 00:23:29,095 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.3 pTM=0.278 ipTM=0.207 tol=2.68
2024-12-05 00:23:42,377 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.2 pTM=0.279 ipTM=0.208 tol=2.2
2024-12-05 00:23:55,645 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.3 pTM=0.292 ipTM=0.214 tol=1.52
2024-12-05 00:24:08,933 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.8 pTM=0.278 ipTM=0.211 tol=3.64
2024-12-05 00:24:08,934 alphafold2_multimer_v3_model_2_seed_000 took 411.2s (30 recycles)
2024-12-05 00:24:22,701 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.5 pTM=0.262 ipTM=0.179
2024-12-05 00:24:36,018 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=51 pTM=0.271 ipTM=0.238 tol=9.77
2024-12-05 00:24:49,348 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.2 pTM=0.273 ipTM=0.166 tol=7.28
2024-12-05 00:25:02,669 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.9 pTM=0.273 ipTM=0.172 tol=4.16
2024-12-05 00:25:15,960 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.3 pTM=0.286 ipTM=0.21 tol=4.12
2024-12-05 00:25:29,252 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.9 pTM=0.289 ipTM=0.186 tol=2.63
2024-12-05 00:25:42,541 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.2 pTM=0.296 ipTM=0.198 tol=2.45
2024-12-05 00:25:55,823 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.4 pTM=0.303 ipTM=0.206 tol=3.31
2024-12-05 00:26:09,097 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.2 pTM=0.304 ipTM=0.199 tol=3.59
2024-12-05 00:26:22,386 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.5 pTM=0.315 ipTM=0.231 tol=2.34
2024-12-05 00:26:35,656 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.5 pTM=0.322 ipTM=0.217 tol=2.67
2024-12-05 00:26:48,937 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.1 pTM=0.301 ipTM=0.201 tol=4.16
2024-12-05 00:27:02,236 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.1 pTM=0.305 ipTM=0.214 tol=4.18
2024-12-05 00:27:15,520 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.3 pTM=0.312 ipTM=0.212 tol=2.35
2024-12-05 00:27:28,810 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.3 pTM=0.309 ipTM=0.214 tol=1.33
2024-12-05 00:27:42,086 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.2 pTM=0.314 ipTM=0.212 tol=1.36
2024-12-05 00:27:55,360 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.2 pTM=0.306 ipTM=0.213 tol=1.69
2024-12-05 00:28:08,637 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.2 pTM=0.314 ipTM=0.214 tol=1.27
2024-12-05 00:28:21,913 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.4 pTM=0.313 ipTM=0.217 tol=1.43
2024-12-05 00:28:35,196 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.3 pTM=0.315 ipTM=0.214 tol=1.63
2024-12-05 00:28:48,466 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.3 pTM=0.317 ipTM=0.221 tol=3.09
2024-12-05 00:29:01,750 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.2 pTM=0.317 ipTM=0.213 tol=1.59
2024-12-05 00:29:15,024 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.2 pTM=0.319 ipTM=0.219 tol=1.97
2024-12-05 00:29:28,297 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53 pTM=0.311 ipTM=0.208 tol=2.13
2024-12-05 00:29:41,574 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.2 pTM=0.315 ipTM=0.217 tol=1.44
2024-12-05 00:29:54,823 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.4 pTM=0.322 ipTM=0.216 tol=2.51
2024-12-05 00:30:08,077 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.4 pTM=0.325 ipTM=0.219 tol=2.04
2024-12-05 00:30:21,332 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.5 pTM=0.342 ipTM=0.223 tol=1.67
2024-12-05 00:30:34,584 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.6 pTM=0.335 ipTM=0.223 tol=1.29
2024-12-05 00:30:47,845 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.7 pTM=0.355 ipTM=0.225 tol=1.23
2024-12-05 00:31:01,118 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.7 pTM=0.347 ipTM=0.229 tol=3
2024-12-05 00:31:01,118 alphafold2_multimer_v3_model_3_seed_000 took 411.8s (30 recycles)
2024-12-05 00:31:14,819 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.5 pTM=0.307 ipTM=0.231
2024-12-05 00:31:28,070 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=51.2 pTM=0.275 ipTM=0.153 tol=10.1
2024-12-05 00:31:41,342 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.9 pTM=0.281 ipTM=0.188 tol=8.15
2024-12-05 00:31:54,584 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51.4 pTM=0.275 ipTM=0.182 tol=5.15
2024-12-05 00:32:07,838 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.3 pTM=0.279 ipTM=0.202 tol=4.93
2024-12-05 00:32:21,105 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51.6 pTM=0.269 ipTM=0.169 tol=5.45
2024-12-05 00:32:36,036 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52 pTM=0.277 ipTM=0.199 tol=5.5
2024-12-05 00:32:49,292 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.1 pTM=0.275 ipTM=0.189 tol=3.04
2024-12-05 00:33:02,531 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.2 pTM=0.277 ipTM=0.198 tol=3.87
2024-12-05 00:33:15,810 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52 pTM=0.278 ipTM=0.197 tol=3.59
2024-12-05 00:33:29,053 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.7 pTM=0.281 ipTM=0.216 tol=3.33
2024-12-05 00:33:42,276 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=51.9 pTM=0.282 ipTM=0.212 tol=3.59
2024-12-05 00:33:55,549 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=51.4 pTM=0.279 ipTM=0.201 tol=2.98
2024-12-05 00:34:08,844 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.6 pTM=0.284 ipTM=0.21 tol=2.65
2024-12-05 00:34:22,149 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51.1 pTM=0.279 ipTM=0.199 tol=2.38
2024-12-05 00:34:35,444 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51.4 pTM=0.283 ipTM=0.207 tol=2.07
2024-12-05 00:34:48,721 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51.2 pTM=0.28 ipTM=0.2 tol=2.54
2024-12-05 00:35:02,010 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.2 pTM=0.286 ipTM=0.214 tol=2.59
2024-12-05 00:35:15,284 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=51.1 pTM=0.286 ipTM=0.207 tol=2.64
2024-12-05 00:35:28,566 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.2 pTM=0.284 ipTM=0.203 tol=3.88
2024-12-05 00:35:41,836 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=51 pTM=0.287 ipTM=0.197 tol=4.26
2024-12-05 00:35:55,102 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=51.2 pTM=0.287 ipTM=0.203 tol=3.69
2024-12-05 00:36:08,337 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51.3 pTM=0.299 ipTM=0.201 tol=3.59
2024-12-05 00:36:21,591 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=51.5 pTM=0.313 ipTM=0.21 tol=3.24
2024-12-05 00:36:34,839 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.3 pTM=0.364 ipTM=0.213 tol=2.47
2024-12-05 00:36:48,074 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.5 pTM=0.363 ipTM=0.217 tol=1.85
2024-12-05 00:37:01,318 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52 pTM=0.349 ipTM=0.225 tol=2.43
2024-12-05 00:37:14,581 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51.8 pTM=0.336 ipTM=0.21 tol=1.96
2024-12-05 00:37:27,833 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.1 pTM=0.355 ipTM=0.215 tol=2.28
2024-12-05 00:37:41,092 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.9 pTM=0.336 ipTM=0.206 tol=3
2024-12-05 00:37:54,340 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.2 pTM=0.361 ipTM=0.238 tol=2.5
2024-12-05 00:37:54,341 alphafold2_multimer_v3_model_4_seed_000 took 412.8s (30 recycles)
2024-12-05 00:38:08,121 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.3 pTM=0.274 ipTM=0.161
2024-12-05 00:38:21,464 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.8 pTM=0.266 ipTM=0.165 tol=10.6
2024-12-05 00:38:34,820 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=51.9 pTM=0.276 ipTM=0.156 tol=6.92
2024-12-05 00:38:48,176 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.1 pTM=0.268 ipTM=0.147 tol=4.83
2024-12-05 00:39:01,527 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.4 pTM=0.279 ipTM=0.239 tol=5.46
2024-12-05 00:39:14,880 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.7 pTM=0.277 ipTM=0.244 tol=7.31
2024-12-05 00:39:28,234 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.7 pTM=0.275 ipTM=0.219 tol=5.36
2024-12-05 00:39:41,570 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.2 pTM=0.275 ipTM=0.165 tol=6.04
2024-12-05 00:39:54,912 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.4 pTM=0.274 ipTM=0.203 tol=4.93
2024-12-05 00:40:08,246 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.5 pTM=0.273 ipTM=0.178 tol=6.09
2024-12-05 00:40:21,579 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.7 pTM=0.273 ipTM=0.16 tol=5.91
2024-12-05 00:40:34,930 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.7 pTM=0.273 ipTM=0.167 tol=5.75
2024-12-05 00:40:48,287 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.6 pTM=0.273 ipTM=0.168 tol=6.11
2024-12-05 00:41:01,621 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.7 pTM=0.273 ipTM=0.17 tol=6.23
2024-12-05 00:41:14,972 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.8 pTM=0.294 ipTM=0.158 tol=6.7
2024-12-05 00:41:28,322 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.2 pTM=0.27 ipTM=0.137 tol=3.73
2024-12-05 00:41:41,663 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.9 pTM=0.277 ipTM=0.172 tol=4.79
2024-12-05 00:41:54,990 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.9 pTM=0.304 ipTM=0.16 tol=4.21
2024-12-05 00:42:08,311 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.5 pTM=0.299 ipTM=0.159 tol=4.54
2024-12-05 00:42:21,619 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.9 pTM=0.298 ipTM=0.152 tol=4.37
2024-12-05 00:42:34,935 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.8 pTM=0.289 ipTM=0.145 tol=3.44
2024-12-05 00:42:48,263 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.8 pTM=0.297 ipTM=0.188 tol=3.3
2024-12-05 00:43:01,588 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.4 pTM=0.304 ipTM=0.194 tol=4.07
2024-12-05 00:43:14,899 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.2 pTM=0.297 ipTM=0.191 tol=3.49
2024-12-05 00:43:28,214 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.4 pTM=0.3 ipTM=0.23 tol=3.74
2024-12-05 00:43:41,523 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.6 pTM=0.287 ipTM=0.171 tol=3.01
2024-12-05 00:43:54,832 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.3 pTM=0.329 ipTM=0.146 tol=2.99
2024-12-05 00:44:08,139 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.5 pTM=0.296 ipTM=0.164 tol=3.7
2024-12-05 00:44:21,438 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.2 pTM=0.311 ipTM=0.161 tol=4.18
2024-12-05 00:44:34,748 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.5 pTM=0.296 ipTM=0.162 tol=2.81
2024-12-05 00:44:48,073 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53 pTM=0.31 ipTM=0.183 tol=2.32
2024-12-05 00:44:48,074 alphafold2_multimer_v3_model_5_seed_000 took 413.3s (30 recycles)
2024-12-05 00:44:48,477 reranking models by 'multimer' metric
2024-12-05 00:44:53,050 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 00:45:49,397 Relaxation took 60.9s
2024-12-05 00:45:49,397 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.2 pTM=0.361 ipTM=0.238
2024-12-05 00:46:46,328 Relaxation took 56.9s
2024-12-05 00:46:46,328 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.7 pTM=0.347 ipTM=0.229
2024-12-05 00:47:39,861 Relaxation took 53.5s
2024-12-05 00:47:39,861 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.8 pTM=0.278 ipTM=0.211
2024-12-05 00:48:21,500 Relaxation took 41.6s
2024-12-05 00:48:21,500 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53 pTM=0.31 ipTM=0.183
2024-12-05 00:49:18,021 Relaxation took 56.5s
2024-12-05 00:49:18,022 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.6 pTM=0.275 ipTM=0.165
2024-12-05 00:49:19,426 Done