2024-12-05 00:21:53,014 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 00:21:53,354 Running on GPU
2024-12-05 00:21:58,670 Found 6 citations for tools or databases
2024-12-05 00:21:58,670 Query 1/1: BIRC2_SYCN (length 752)
2024-12-05 00:21:59,105 Sleeping for 9s. Reason: PENDING
2024-12-05 00:22:08,365 Sleeping for 10s. Reason: PENDING
2024-12-05 00:22:18,629 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:22:23,890 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:22:30,147 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:22:36,417 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:22:44,676 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:22:50,930 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:22:59,184 Sleeping for 7s. Reason: RUNNING
2024-12-05 00:23:06,437 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:23:14,693 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:23:22,946 Sleeping for 9s. Reason: RUNNING
2024-12-05 00:23:32,209 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:23:42,476 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:23:47,728 Sleeping for 9s. Reason: RUNNING
2024-12-05 00:23:56,989 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:24:02,242 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:24:14,299 Sleeping for 10s. Reason: PENDING
2024-12-05 00:24:24,558 Sleeping for 7s. Reason: RUNNING
2024-12-05 00:24:31,818 Sleeping for 7s. Reason: RUNNING
2024-12-05 00:24:39,076 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:24:49,339 Sleeping for 7s. Reason: RUNNING
2024-12-05 00:24:56,615 Sleeping for 7s. Reason: RUNNING
2024-12-05 00:25:03,870 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:25:17,423 Setting max_seq=508, max_extra_seq=2048
2024-12-05 00:27:21,162 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.6 pTM=0.266 ipTM=0.201
2024-12-05 00:27:31,480 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59 pTM=0.264 ipTM=0.176 tol=5.93
2024-12-05 00:27:41,822 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.8 pTM=0.256 ipTM=0.22 tol=7.93
2024-12-05 00:27:52,183 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.9 pTM=0.256 ipTM=0.24 tol=4.16
2024-12-05 00:28:02,559 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.8 pTM=0.255 ipTM=0.257 tol=2.82
2024-12-05 00:28:12,959 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.4 pTM=0.253 ipTM=0.195 tol=2.35
2024-12-05 00:28:23,357 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61 pTM=0.254 ipTM=0.228 tol=3.22
2024-12-05 00:28:33,769 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.3 pTM=0.254 ipTM=0.216 tol=3.18
2024-12-05 00:28:44,194 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.6 pTM=0.257 ipTM=0.24 tol=3.58
2024-12-05 00:28:54,629 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.4 pTM=0.257 ipTM=0.236 tol=1.96
2024-12-05 00:29:05,075 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.5 pTM=0.258 ipTM=0.239 tol=1.87
2024-12-05 00:29:15,516 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.5 pTM=0.258 ipTM=0.236 tol=1.75
2024-12-05 00:29:25,958 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.7 pTM=0.258 ipTM=0.251 tol=1.7
2024-12-05 00:29:36,409 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.3 pTM=0.257 ipTM=0.241 tol=1.27
2024-12-05 00:29:46,855 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.4 pTM=0.26 ipTM=0.255 tol=1.62
2024-12-05 00:29:57,313 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.5 pTM=0.258 ipTM=0.234 tol=1.15
2024-12-05 00:30:07,781 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.5 pTM=0.258 ipTM=0.247 tol=1.03
2024-12-05 00:30:18,245 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.6 pTM=0.258 ipTM=0.239 tol=1.07
2024-12-05 00:30:28,714 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.5 pTM=0.259 ipTM=0.257 tol=1.05
2024-12-05 00:30:39,179 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.7 pTM=0.26 ipTM=0.257 tol=1.04
2024-12-05 00:30:49,641 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.8 pTM=0.26 ipTM=0.259 tol=1.21
2024-12-05 00:31:00,109 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62 pTM=0.261 ipTM=0.252 tol=1.27
2024-12-05 00:31:10,572 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.7 pTM=0.258 ipTM=0.255 tol=1.44
2024-12-05 00:31:21,046 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.9 pTM=0.262 ipTM=0.242 tol=1.57
2024-12-05 00:31:31,523 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.8 pTM=0.259 ipTM=0.251 tol=1.52
2024-12-05 00:31:42,003 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62 pTM=0.26 ipTM=0.234 tol=3.58
2024-12-05 00:31:52,497 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.6 pTM=0.261 ipTM=0.23 tol=2.74
2024-12-05 00:32:02,985 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.7 pTM=0.26 ipTM=0.229 tol=2.02
2024-12-05 00:32:13,465 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.6 pTM=0.261 ipTM=0.239 tol=8.26
2024-12-05 00:32:23,949 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.4 pTM=0.258 ipTM=0.241 tol=4.04
2024-12-05 00:32:35,232 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.1 pTM=0.26 ipTM=0.244 tol=4.45
2024-12-05 00:32:35,232 alphafold2_multimer_v3_model_1_seed_000 took 431.5s (30 recycles)
2024-12-05 00:32:46,139 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.1 pTM=0.252 ipTM=0.195
2024-12-05 00:32:56,681 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.8 pTM=0.255 ipTM=0.205 tol=6.97
2024-12-05 00:33:07,202 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.6 pTM=0.266 ipTM=0.258 tol=4.8
2024-12-05 00:33:17,729 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.1 pTM=0.272 ipTM=0.294 tol=2.46
2024-12-05 00:33:28,263 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.4 pTM=0.284 ipTM=0.378 tol=1.78
2024-12-05 00:33:38,798 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.5 pTM=0.286 ipTM=0.381 tol=1.42
2024-12-05 00:33:49,323 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.2 pTM=0.277 ipTM=0.331 tol=1.37
2024-12-05 00:33:59,846 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.4 pTM=0.277 ipTM=0.33 tol=1.22
2024-12-05 00:34:10,374 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.4 pTM=0.277 ipTM=0.327 tol=1.5
2024-12-05 00:34:20,902 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.4 pTM=0.28 ipTM=0.332 tol=1.45
2024-12-05 00:34:31,425 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.4 pTM=0.276 ipTM=0.319 tol=1.42
2024-12-05 00:34:41,953 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.6 pTM=0.275 ipTM=0.316 tol=1.11
2024-12-05 00:34:52,472 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.7 pTM=0.27 ipTM=0.287 tol=0.83
2024-12-05 00:35:02,979 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.3 pTM=0.27 ipTM=0.286 tol=1.15
2024-12-05 00:35:13,505 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.6 pTM=0.278 ipTM=0.321 tol=0.868
2024-12-05 00:35:24,023 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.5 pTM=0.283 ipTM=0.366 tol=0.998
2024-12-05 00:35:34,548 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.7 pTM=0.28 ipTM=0.345 tol=0.911
2024-12-05 00:35:45,079 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.4 pTM=0.274 ipTM=0.315 tol=0.884
2024-12-05 00:35:55,647 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.6 pTM=0.273 ipTM=0.301 tol=1.01
2024-12-05 00:36:06,196 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.6 pTM=0.271 ipTM=0.299 tol=1.18
2024-12-05 00:36:16,750 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.6 pTM=0.271 ipTM=0.29 tol=1.01
2024-12-05 00:36:27,306 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.7 pTM=0.279 ipTM=0.327 tol=1.81
2024-12-05 00:36:37,859 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.4 pTM=0.265 ipTM=0.263 tol=1.99
2024-12-05 00:36:48,409 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.5 pTM=0.266 ipTM=0.265 tol=1.72
2024-12-05 00:36:58,968 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.4 pTM=0.271 ipTM=0.288 tol=1.4
2024-12-05 00:37:09,524 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.6 pTM=0.276 ipTM=0.321 tol=1.25
2024-12-05 00:37:20,067 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.7 pTM=0.28 ipTM=0.344 tol=1.06
2024-12-05 00:37:30,617 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.7 pTM=0.281 ipTM=0.34 tol=0.848
2024-12-05 00:37:41,153 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.6 pTM=0.279 ipTM=0.331 tol=0.861
2024-12-05 00:37:51,690 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.8 pTM=0.287 ipTM=0.384 tol=1.29
2024-12-05 00:38:02,223 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66 pTM=0.289 ipTM=0.39 tol=1.23
2024-12-05 00:38:02,224 alphafold2_multimer_v3_model_2_seed_000 took 326.6s (30 recycles)
2024-12-05 00:38:13,132 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.8 pTM=0.258 ipTM=0.193
2024-12-05 00:38:23,637 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.2 pTM=0.302 ipTM=0.444 tol=13.1
2024-12-05 00:38:34,134 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.7 pTM=0.31 ipTM=0.508 tol=3.87
2024-12-05 00:38:44,625 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.9 pTM=0.303 ipTM=0.47 tol=2.42
2024-12-05 00:38:55,122 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.1 pTM=0.287 ipTM=0.416 tol=2.4
2024-12-05 00:39:05,626 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.2 pTM=0.295 ipTM=0.439 tol=1.19
2024-12-05 00:39:16,114 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.8 pTM=0.282 ipTM=0.402 tol=1.18
2024-12-05 00:39:26,605 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.8 pTM=0.291 ipTM=0.423 tol=0.692
2024-12-05 00:39:37,093 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.7 pTM=0.288 ipTM=0.412 tol=0.863
2024-12-05 00:39:47,576 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.6 pTM=0.272 ipTM=0.35 tol=1.84
2024-12-05 00:39:58,065 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.2 pTM=0.273 ipTM=0.303 tol=1.5
2024-12-05 00:40:08,562 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.9 pTM=0.272 ipTM=0.287 tol=0.793
2024-12-05 00:40:19,057 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.7 pTM=0.269 ipTM=0.274 tol=0.927
2024-12-05 00:40:29,555 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.5 pTM=0.27 ipTM=0.264 tol=0.898
2024-12-05 00:40:40,056 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.5 pTM=0.267 ipTM=0.242 tol=1.11
2024-12-05 00:40:50,568 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.4 pTM=0.265 ipTM=0.207 tol=1.31
2024-12-05 00:41:01,074 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.1 pTM=0.262 ipTM=0.227 tol=1.53
2024-12-05 00:41:11,576 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.8 pTM=0.27 ipTM=0.343 tol=1.53
2024-12-05 00:41:22,079 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.8 pTM=0.266 ipTM=0.302 tol=1.94
2024-12-05 00:41:32,584 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.5 pTM=0.265 ipTM=0.249 tol=1.99
2024-12-05 00:41:43,092 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.4 pTM=0.265 ipTM=0.256 tol=1.27
2024-12-05 00:41:53,595 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.6 pTM=0.267 ipTM=0.344 tol=0.77
2024-12-05 00:42:04,103 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.7 pTM=0.265 ipTM=0.306 tol=1.48
2024-12-05 00:42:14,603 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.3 pTM=0.264 ipTM=0.24 tol=1.07
2024-12-05 00:42:25,104 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.5 pTM=0.264 ipTM=0.261 tol=1.05
2024-12-05 00:42:35,611 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.3 pTM=0.264 ipTM=0.229 tol=1.33
2024-12-05 00:42:46,125 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.4 pTM=0.264 ipTM=0.223 tol=1.1
2024-12-05 00:42:56,641 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.3 pTM=0.265 ipTM=0.226 tol=1.08
2024-12-05 00:43:07,151 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.5 pTM=0.265 ipTM=0.229 tol=1.33
2024-12-05 00:43:17,669 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62 pTM=0.264 ipTM=0.189 tol=2.7
2024-12-05 00:43:28,190 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62 pTM=0.263 ipTM=0.193 tol=1.62
2024-12-05 00:43:28,190 alphafold2_multimer_v3_model_3_seed_000 took 325.6s (30 recycles)
2024-12-05 00:43:39,059 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.8 pTM=0.263 ipTM=0.235
2024-12-05 00:43:49,543 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.9 pTM=0.292 ipTM=0.23 tol=9.03
2024-12-05 00:44:00,041 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.2 pTM=0.272 ipTM=0.2 tol=4.56
2024-12-05 00:44:10,533 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.1 pTM=0.274 ipTM=0.205 tol=2.74
2024-12-05 00:44:21,034 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60 pTM=0.266 ipTM=0.198 tol=3.19
2024-12-05 00:44:31,529 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.1 pTM=0.267 ipTM=0.2 tol=3.07
2024-12-05 00:44:42,023 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.8 pTM=0.264 ipTM=0.199 tol=2.21
2024-12-05 00:44:52,524 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.9 pTM=0.262 ipTM=0.204 tol=2.44
2024-12-05 00:45:03,017 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.3 pTM=0.268 ipTM=0.203 tol=3.97
2024-12-05 00:45:13,508 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.7 pTM=0.261 ipTM=0.203 tol=5.5
2024-12-05 00:45:23,991 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.2 pTM=0.266 ipTM=0.235 tol=2.75
2024-12-05 00:45:34,480 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.2 pTM=0.289 ipTM=0.35 tol=2
2024-12-05 00:45:44,968 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.5 pTM=0.318 ipTM=0.475 tol=2.16
2024-12-05 00:45:55,448 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.5 pTM=0.342 ipTM=0.58 tol=11
2024-12-05 00:46:05,922 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.5 pTM=0.333 ipTM=0.554 tol=7.15
2024-12-05 00:46:16,418 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.4 pTM=0.333 ipTM=0.571 tol=6.89
2024-12-05 00:46:26,922 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.2 pTM=0.325 ipTM=0.53 tol=4.43
2024-12-05 00:46:37,424 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.6 pTM=0.341 ipTM=0.585 tol=3.13
2024-12-05 00:46:47,934 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64 pTM=0.342 ipTM=0.596 tol=2.74
2024-12-05 00:46:58,443 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.4 pTM=0.359 ipTM=0.637 tol=3.33
2024-12-05 00:47:08,955 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.4 pTM=0.356 ipTM=0.633 tol=2.26
2024-12-05 00:47:19,465 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.4 pTM=0.359 ipTM=0.648 tol=3.05
2024-12-05 00:47:29,982 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.1 pTM=0.348 ipTM=0.624 tol=2.94
2024-12-05 00:47:40,504 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64 pTM=0.353 ipTM=0.617 tol=1.73
2024-12-05 00:47:51,026 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.3 pTM=0.357 ipTM=0.636 tol=2.33
2024-12-05 00:48:01,544 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.6 pTM=0.361 ipTM=0.654 tol=2.52
2024-12-05 00:48:12,066 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.4 pTM=0.356 ipTM=0.642 tol=2.1
2024-12-05 00:48:22,595 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.8 pTM=0.36 ipTM=0.654 tol=1.57
2024-12-05 00:48:33,121 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.8 pTM=0.364 ipTM=0.662 tol=2.1
2024-12-05 00:48:43,645 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.7 pTM=0.362 ipTM=0.659 tol=3.15
2024-12-05 00:48:54,165 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.8 pTM=0.361 ipTM=0.65 tol=1.81
2024-12-05 00:48:54,166 alphafold2_multimer_v3_model_4_seed_000 took 325.6s (30 recycles)
2024-12-05 00:49:05,051 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.3 pTM=0.303 ipTM=0.167
2024-12-05 00:49:15,563 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.4 pTM=0.287 ipTM=0.294 tol=6.35
2024-12-05 00:49:26,078 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.9 pTM=0.299 ipTM=0.18 tol=6.3
2024-12-05 00:49:36,607 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.2 pTM=0.271 ipTM=0.17 tol=3.3
2024-12-05 00:49:47,138 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.2 pTM=0.28 ipTM=0.177 tol=3.98
2024-12-05 00:49:57,668 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.4 pTM=0.27 ipTM=0.173 tol=2.8
2024-12-05 00:50:08,198 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.9 pTM=0.271 ipTM=0.174 tol=3.21
2024-12-05 00:50:18,729 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.4 pTM=0.265 ipTM=0.182 tol=1.62
2024-12-05 00:50:29,265 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.8 pTM=0.271 ipTM=0.177 tol=2.21
2024-12-05 00:50:39,801 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.5 pTM=0.266 ipTM=0.184 tol=2.36
2024-12-05 00:50:50,336 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.9 pTM=0.274 ipTM=0.173 tol=2.4
2024-12-05 00:51:00,870 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.3 pTM=0.268 ipTM=0.178 tol=1.82
2024-12-05 00:51:11,395 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.7 pTM=0.275 ipTM=0.177 tol=2.32
2024-12-05 00:51:21,925 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.9 pTM=0.263 ipTM=0.186 tol=2.35
2024-12-05 00:51:32,451 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.3 pTM=0.259 ipTM=0.2 tol=4.14
2024-12-05 00:51:42,975 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.1 pTM=0.258 ipTM=0.213 tol=2.33
2024-12-05 00:51:53,489 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.5 pTM=0.257 ipTM=0.218 tol=3.34
2024-12-05 00:52:04,001 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.3 pTM=0.267 ipTM=0.205 tol=4.55
2024-12-05 00:52:14,519 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.3 pTM=0.26 ipTM=0.207 tol=2.4
2024-12-05 00:52:25,043 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.2 pTM=0.259 ipTM=0.222 tol=3
2024-12-05 00:52:35,550 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.3 pTM=0.271 ipTM=0.205 tol=4.59
2024-12-05 00:52:46,073 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.2 pTM=0.26 ipTM=0.219 tol=3.81
2024-12-05 00:52:56,580 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.4 pTM=0.258 ipTM=0.22 tol=3.99
2024-12-05 00:53:07,093 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.2 pTM=0.26 ipTM=0.228 tol=1.94
2024-12-05 00:53:17,604 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.2 pTM=0.287 ipTM=0.196 tol=11.9
2024-12-05 00:53:28,133 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.4 pTM=0.268 ipTM=0.2 tol=9.64
2024-12-05 00:53:38,666 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.2 pTM=0.258 ipTM=0.198 tol=8.27
2024-12-05 00:53:49,196 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.7 pTM=0.27 ipTM=0.197 tol=7.71
2024-12-05 00:53:59,713 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.6 pTM=0.262 ipTM=0.234 tol=5.04
2024-12-05 00:54:10,223 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60.6 pTM=0.269 ipTM=0.267 tol=4.7
2024-12-05 00:54:20,741 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.5 pTM=0.261 ipTM=0.23 tol=3.7
2024-12-05 00:54:20,742 alphafold2_multimer_v3_model_5_seed_000 took 326.2s (30 recycles)
2024-12-05 00:54:21,104 reranking models by 'multimer' metric
2024-12-05 00:54:25,222 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 01:00:01,815 Relaxation took 340.7s
2024-12-05 01:00:01,815 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.8 pTM=0.361 ipTM=0.65
2024-12-05 01:00:44,576 Relaxation took 42.8s
2024-12-05 01:00:44,576 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66 pTM=0.289 ipTM=0.39
2024-12-05 01:01:32,869 Relaxation took 48.3s
2024-12-05 01:01:32,869 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.1 pTM=0.26 ipTM=0.244
2024-12-05 01:02:16,211 Relaxation took 43.3s
2024-12-05 01:02:16,211 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.5 pTM=0.261 ipTM=0.23
2024-12-05 01:02:38,473 Relaxation took 22.3s
2024-12-05 01:02:38,473 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62 pTM=0.263 ipTM=0.193
2024-12-05 01:02:39,951 Done