2024-12-05 00:50:06,469 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 00:50:06,785 Running on GPU
2024-12-05 00:50:11,367 Found 6 citations for tools or databases
2024-12-05 00:50:11,367 Query 1/1: BMI1_PHC1 (length 1330)
2024-12-05 00:50:11,664 Sleeping for 6s. Reason: PENDING
2024-12-05 00:50:17,923 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:50:24,181 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:50:34,446 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:50:39,701 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:50:44,959 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:50:50,212 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:50:56,467 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:51:04,729 Sleeping for 7s. Reason: RUNNING
2024-12-05 00:51:11,982 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:51:20,242 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:51:25,497 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:51:35,753 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:51:41,008 Sleeping for 7s. Reason: RUNNING
2024-12-05 00:51:48,270 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:52:00,218 Sleeping for 5s. Reason: PENDING
2024-12-05 00:52:05,473 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:52:13,732 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:52:19,993 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:52:30,257 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:52:40,513 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:52:48,771 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:52:55,024 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:53:09,209 Setting max_seq=508, max_extra_seq=2048
2024-12-05 00:56:24,037 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=32 pTM=0.273 ipTM=0.523
2024-12-05 00:57:10,691 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=31.5 pTM=0.274 ipTM=0.509 tol=16
2024-12-05 00:57:57,588 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=32.5 pTM=0.279 ipTM=0.529 tol=13.4
2024-12-05 00:58:44,579 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=32.4 pTM=0.272 ipTM=0.516 tol=10.3
2024-12-05 00:59:31,612 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=32.9 pTM=0.281 ipTM=0.548 tol=10.2
2024-12-05 01:00:18,794 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=33 pTM=0.283 ipTM=0.566 tol=8.85
2024-12-05 01:01:05,918 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=32.8 pTM=0.278 ipTM=0.546 tol=7.58
2024-12-05 01:01:53,054 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=32.8 pTM=0.28 ipTM=0.554 tol=5.62
2024-12-05 01:02:40,166 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=32.8 pTM=0.281 ipTM=0.556 tol=7.69
2024-12-05 01:03:27,283 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=33 pTM=0.285 ipTM=0.569 tol=6.96
2024-12-05 01:04:14,407 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=33.1 pTM=0.288 ipTM=0.575 tol=4.65
2024-12-05 01:05:01,511 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=32.8 pTM=0.283 ipTM=0.565 tol=5.06
2024-12-05 01:05:48,615 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=33.2 pTM=0.286 ipTM=0.575 tol=3.58
2024-12-05 01:06:35,741 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=32.8 pTM=0.282 ipTM=0.559 tol=5.44
2024-12-05 01:07:22,829 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=32.9 pTM=0.283 ipTM=0.562 tol=6.49
2024-12-05 01:08:09,906 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=32.9 pTM=0.285 ipTM=0.57 tol=6.5
2024-12-05 01:08:57,014 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=32.9 pTM=0.282 ipTM=0.561 tol=6.76
2024-12-05 01:09:44,142 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=32.9 pTM=0.283 ipTM=0.562 tol=6.53
2024-12-05 01:10:31,241 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=33.1 pTM=0.287 ipTM=0.572 tol=7.23
2024-12-05 01:11:18,313 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=32.8 pTM=0.284 ipTM=0.562 tol=8.91
2024-12-05 01:12:05,422 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=32.9 pTM=0.283 ipTM=0.558 tol=10.2
2024-12-05 01:12:52,576 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=33 pTM=0.284 ipTM=0.567 tol=9.73
2024-12-05 01:13:39,741 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=32.9 pTM=0.284 ipTM=0.563 tol=6.9
2024-12-05 01:14:26,897 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=32.8 pTM=0.279 ipTM=0.55 tol=4.46
2024-12-05 01:15:14,066 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=32.8 pTM=0.282 ipTM=0.554 tol=4.58
2024-12-05 01:16:01,228 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=32.8 pTM=0.282 ipTM=0.557 tol=3.62
2024-12-05 01:16:48,399 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=32.8 pTM=0.28 ipTM=0.553 tol=3.72
2024-12-05 01:17:35,530 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=32.9 pTM=0.278 ipTM=0.545 tol=3.38
2024-12-05 01:18:22,666 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=32.9 pTM=0.281 ipTM=0.555 tol=4.08
2024-12-05 01:19:09,813 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=33 pTM=0.284 ipTM=0.571 tol=4.44
2024-12-05 01:19:56,926 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=33.1 pTM=0.286 ipTM=0.571 tol=4.16
2024-12-05 01:19:56,927 alphafold2_multimer_v3_model_1_seed_000 took 1602.4s (30 recycles)
2024-12-05 01:20:44,939 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=32 pTM=0.271 ipTM=0.486
2024-12-05 01:21:31,926 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=33.7 pTM=0.285 ipTM=0.517 tol=21.8
2024-12-05 01:22:18,953 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=33.7 pTM=0.277 ipTM=0.49 tol=15.6
2024-12-05 01:23:06,023 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=34 pTM=0.272 ipTM=0.489 tol=10.7
2024-12-05 01:23:53,112 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=34.5 pTM=0.27 ipTM=0.491 tol=9.46
2024-12-05 01:24:40,191 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=34.5 pTM=0.273 ipTM=0.489 tol=7.21
2024-12-05 01:25:27,302 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=34.7 pTM=0.267 ipTM=0.484 tol=6.26
2024-12-05 01:26:14,464 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=34.9 pTM=0.27 ipTM=0.494 tol=5.32
2024-12-05 01:27:01,581 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=34.9 pTM=0.27 ipTM=0.494 tol=4.52
2024-12-05 01:27:48,653 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=34.9 pTM=0.269 ipTM=0.491 tol=5.04
2024-12-05 01:28:35,729 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=34.5 pTM=0.268 ipTM=0.487 tol=4.75
2024-12-05 01:29:22,823 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=34.8 pTM=0.27 ipTM=0.497 tol=4.6
2024-12-05 01:30:09,881 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=34.8 pTM=0.271 ipTM=0.493 tol=4.52
2024-12-05 01:30:56,967 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=34.9 pTM=0.268 ipTM=0.487 tol=5.05
2024-12-05 01:31:44,042 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=34.8 pTM=0.268 ipTM=0.485 tol=5.76
2024-12-05 01:32:31,125 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=34.8 pTM=0.271 ipTM=0.495 tol=10.6
2024-12-05 01:33:18,242 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=34.7 pTM=0.27 ipTM=0.493 tol=9.32
2024-12-05 01:34:05,333 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=35 pTM=0.27 ipTM=0.494 tol=5.4
2024-12-05 01:34:52,397 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=34.9 pTM=0.27 ipTM=0.488 tol=4.27
2024-12-05 01:35:39,490 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=34.9 pTM=0.27 ipTM=0.49 tol=5.11
2024-12-05 01:36:26,584 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=35.2 pTM=0.27 ipTM=0.491 tol=3.7
2024-12-05 01:37:13,648 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=35 pTM=0.268 ipTM=0.487 tol=4.1
2024-12-05 01:38:00,741 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=35.3 pTM=0.271 ipTM=0.495 tol=3.95
2024-12-05 01:38:47,957 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=35.5 pTM=0.272 ipTM=0.494 tol=3.31
2024-12-05 01:39:35,191 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=35.3 pTM=0.272 ipTM=0.493 tol=3.76
2024-12-05 01:40:22,389 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=35.5 pTM=0.271 ipTM=0.495 tol=2.81
2024-12-05 01:41:09,555 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=35.4 pTM=0.269 ipTM=0.488 tol=3.11
2024-12-05 01:41:56,702 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=35.7 pTM=0.271 ipTM=0.493 tol=3.23
2024-12-05 01:42:43,810 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=35.5 pTM=0.271 ipTM=0.49 tol=3.07
2024-12-05 01:43:30,916 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=35.5 pTM=0.27 ipTM=0.492 tol=3.17
2024-12-05 01:44:17,995 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=35.5 pTM=0.271 ipTM=0.492 tol=3.36
2024-12-05 01:44:17,996 alphafold2_multimer_v3_model_2_seed_000 took 1460.0s (30 recycles)
2024-12-05 01:45:06,309 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=33 pTM=0.258 ipTM=0.489
2024-12-05 01:45:53,740 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=33.9 pTM=0.277 ipTM=0.548 tol=26.4
2024-12-05 01:46:41,255 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=34.7 pTM=0.296 ipTM=0.615 tol=25.8
2024-12-05 01:47:28,766 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=35.3 pTM=0.294 ipTM=0.606 tol=14.7
2024-12-05 01:48:16,314 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=35.4 pTM=0.296 ipTM=0.619 tol=11.6
2024-12-05 01:49:03,892 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=35.7 pTM=0.3 ipTM=0.624 tol=7.43
2024-12-05 01:49:51,434 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=35.8 pTM=0.299 ipTM=0.623 tol=5.2
2024-12-05 01:50:38,954 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=36 pTM=0.303 ipTM=0.635 tol=5.25
2024-12-05 01:51:26,554 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=36.1 pTM=0.304 ipTM=0.632 tol=4.57
2024-12-05 01:52:14,153 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=36.2 pTM=0.309 ipTM=0.635 tol=3.93
2024-12-05 01:53:01,727 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=36.2 pTM=0.307 ipTM=0.637 tol=4.2
2024-12-05 01:53:49,288 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=36.3 pTM=0.307 ipTM=0.637 tol=4.08
2024-12-05 01:54:36,837 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=36.6 pTM=0.313 ipTM=0.638 tol=5.95
2024-12-05 01:55:24,356 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=37 pTM=0.319 ipTM=0.633 tol=4.96
2024-12-05 01:56:11,840 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=37 pTM=0.318 ipTM=0.634 tol=4.09
2024-12-05 01:56:59,353 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=37 pTM=0.321 ipTM=0.636 tol=6.03
2024-12-05 01:57:46,820 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=37 pTM=0.318 ipTM=0.633 tol=5.51
2024-12-05 01:58:34,323 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=36.8 pTM=0.316 ipTM=0.632 tol=5.87
2024-12-05 01:59:21,816 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=36.9 pTM=0.318 ipTM=0.638 tol=5.05
2024-12-05 02:00:09,351 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=36.8 pTM=0.317 ipTM=0.635 tol=12.8
2024-12-05 02:00:56,876 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=36.7 pTM=0.318 ipTM=0.632 tol=12.3
2024-12-05 02:01:44,432 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=36.6 pTM=0.317 ipTM=0.635 tol=15.9
2024-12-05 02:02:31,990 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=36.1 pTM=0.312 ipTM=0.633 tol=18.7
2024-12-05 02:03:19,527 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=36.3 pTM=0.308 ipTM=0.635 tol=10.8
2024-12-05 02:04:07,098 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=36.2 pTM=0.307 ipTM=0.632 tol=6.89
2024-12-05 02:04:54,667 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=36.3 pTM=0.307 ipTM=0.632 tol=4.95
2024-12-05 02:05:42,206 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=36.4 pTM=0.309 ipTM=0.639 tol=3.91
2024-12-05 02:06:29,716 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=36.7 pTM=0.311 ipTM=0.634 tol=3.18
2024-12-05 02:07:17,203 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=36.7 pTM=0.312 ipTM=0.63 tol=3.29
2024-12-05 02:08:04,672 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=36.8 pTM=0.313 ipTM=0.637 tol=3.57
2024-12-05 02:08:52,153 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=36.7 pTM=0.312 ipTM=0.636 tol=3.22
2024-12-05 02:08:52,155 alphafold2_multimer_v3_model_3_seed_000 took 1473.1s (30 recycles)
2024-12-05 02:09:40,441 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=31.2 pTM=0.269 ipTM=0.478
2024-12-05 02:10:27,750 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=32 pTM=0.256 ipTM=0.476 tol=30.1
2024-12-05 02:11:15,059 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=33 pTM=0.274 ipTM=0.487 tol=21.3
2024-12-05 02:12:02,348 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=34 pTM=0.295 ipTM=0.544 tol=15.8
2024-12-05 02:12:49,710 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=34.2 pTM=0.29 ipTM=0.537 tol=17.1
2024-12-05 02:13:37,075 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=34.4 pTM=0.292 ipTM=0.545 tol=10.6
2024-12-05 02:14:24,422 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=34.5 pTM=0.286 ipTM=0.53 tol=12.1
2024-12-05 02:15:11,781 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=34.8 pTM=0.293 ipTM=0.548 tol=12
2024-12-05 02:15:59,130 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=34.8 pTM=0.296 ipTM=0.547 tol=14.7
2024-12-05 02:16:46,458 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=35.1 pTM=0.305 ipTM=0.566 tol=8.72
2024-12-05 02:17:33,924 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=34.9 pTM=0.302 ipTM=0.559 tol=15.8
2024-12-05 02:18:21,412 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=35.1 pTM=0.304 ipTM=0.562 tol=16
2024-12-05 02:19:08,890 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=35 pTM=0.3 ipTM=0.554 tol=10.7
2024-12-05 02:19:56,224 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=34.9 pTM=0.305 ipTM=0.56 tol=12.4
2024-12-05 02:20:43,542 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=34.7 pTM=0.301 ipTM=0.55 tol=14.4
2024-12-05 02:21:30,906 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=35.1 pTM=0.308 ipTM=0.572 tol=15.9
2024-12-05 02:22:18,281 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=34.6 pTM=0.295 ipTM=0.541 tol=19.9
2024-12-05 02:23:05,655 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=35 pTM=0.31 ipTM=0.577 tol=14
2024-12-05 02:23:53,020 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=34.9 pTM=0.308 ipTM=0.57 tol=11.3
2024-12-05 02:24:40,355 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=35 pTM=0.311 ipTM=0.572 tol=15.2
2024-12-05 02:25:27,669 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=34.9 pTM=0.31 ipTM=0.572 tol=11
2024-12-05 02:26:14,996 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=35 pTM=0.311 ipTM=0.574 tol=14.7
2024-12-05 02:27:02,309 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=34.8 pTM=0.308 ipTM=0.565 tol=16.3
2024-12-05 02:27:49,619 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=34.8 pTM=0.309 ipTM=0.569 tol=12.2
2024-12-05 02:28:36,947 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=34.7 pTM=0.308 ipTM=0.565 tol=10.4
2024-12-05 02:29:24,272 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=34.8 pTM=0.309 ipTM=0.566 tol=16.3
2024-12-05 02:30:11,575 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=34.7 pTM=0.302 ipTM=0.553 tol=15
2024-12-05 02:30:58,894 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=34.9 pTM=0.304 ipTM=0.558 tol=14.5
2024-12-05 02:31:46,196 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=34.9 pTM=0.312 ipTM=0.576 tol=13
2024-12-05 02:32:33,557 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=35 pTM=0.312 ipTM=0.576 tol=12.4
2024-12-05 02:33:20,937 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=34.7 pTM=0.307 ipTM=0.565 tol=14
2024-12-05 02:33:20,938 alphafold2_multimer_v3_model_4_seed_000 took 1467.7s (30 recycles)
2024-12-05 02:34:09,393 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=31.7 pTM=0.25 ipTM=0.47
2024-12-05 02:34:56,957 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=32.8 pTM=0.267 ipTM=0.497 tol=29.1
2024-12-05 02:35:44,600 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=33.7 pTM=0.262 ipTM=0.488 tol=20.2
2024-12-05 02:36:32,193 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=34 pTM=0.263 ipTM=0.494 tol=16.4
2024-12-05 02:37:19,801 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=34.2 pTM=0.262 ipTM=0.493 tol=10.1
2024-12-05 02:38:07,403 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=34.7 pTM=0.266 ipTM=0.506 tol=21.4
2024-12-05 02:38:55,011 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=34.9 pTM=0.265 ipTM=0.501 tol=17.4
2024-12-05 02:39:42,600 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=35 pTM=0.269 ipTM=0.517 tol=14
2024-12-05 02:40:30,223 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=35 pTM=0.264 ipTM=0.507 tol=11.2
2024-12-05 02:41:17,824 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=35.5 pTM=0.278 ipTM=0.536 tol=6.95
2024-12-05 02:42:05,428 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=35.2 pTM=0.267 ipTM=0.509 tol=11.4
2024-12-05 02:42:53,135 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=35.7 pTM=0.278 ipTM=0.543 tol=8.91
2024-12-05 02:43:40,803 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=35.7 pTM=0.272 ipTM=0.52 tol=16.5
2024-12-05 02:44:28,454 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=35.8 pTM=0.271 ipTM=0.519 tol=16.1
2024-12-05 02:45:16,075 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=35.6 pTM=0.267 ipTM=0.51 tol=6.95
2024-12-05 02:46:03,738 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=35.8 pTM=0.274 ipTM=0.531 tol=10.5
2024-12-05 02:46:51,365 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=35.6 pTM=0.27 ipTM=0.517 tol=6.96
2024-12-05 02:47:38,990 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=35.7 pTM=0.271 ipTM=0.528 tol=8.91
2024-12-05 02:48:26,587 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=35.7 pTM=0.266 ipTM=0.512 tol=4.95
2024-12-05 02:49:14,201 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=35.8 pTM=0.27 ipTM=0.521 tol=17
2024-12-05 02:50:01,816 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=35.6 pTM=0.266 ipTM=0.509 tol=12.7
2024-12-05 02:50:49,421 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=35.9 pTM=0.274 ipTM=0.533 tol=5.77
2024-12-05 02:51:37,007 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=35.3 pTM=0.268 ipTM=0.514 tol=11.6
2024-12-05 02:52:24,612 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=35.8 pTM=0.275 ipTM=0.538 tol=10.9
2024-12-05 02:53:12,242 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=35.5 pTM=0.265 ipTM=0.506 tol=13.8
2024-12-05 02:53:59,875 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=35.7 pTM=0.273 ipTM=0.533 tol=11.9
2024-12-05 02:54:47,471 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=35.5 pTM=0.271 ipTM=0.517 tol=13
2024-12-05 02:55:35,176 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=35.8 pTM=0.278 ipTM=0.54 tol=15
2024-12-05 02:56:22,974 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=35.7 pTM=0.273 ipTM=0.523 tol=15.2
2024-12-05 02:57:10,787 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=35.8 pTM=0.274 ipTM=0.532 tol=9.52
2024-12-05 02:57:58,522 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=35.6 pTM=0.274 ipTM=0.531 tol=13.5
2024-12-05 02:57:58,524 alphafold2_multimer_v3_model_5_seed_000 took 1476.5s (30 recycles)
2024-12-05 02:57:59,583 reranking models by 'multimer' metric
2024-12-05 02:58:03,299 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 03:00:06,878 Relaxation took 127.3s
2024-12-05 03:00:06,878 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=36.7 pTM=0.312 ipTM=0.636
2024-12-05 03:17:26,906 Relaxation took 1040.0s
2024-12-05 03:17:26,906 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=33.1 pTM=0.286 ipTM=0.571
2024-12-05 03:19:52,457 Relaxation took 145.5s
2024-12-05 03:19:52,457 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=34.7 pTM=0.307 ipTM=0.565
2024-12-05 03:22:13,830 Relaxation took 141.4s
2024-12-05 03:22:13,830 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=35.6 pTM=0.274 ipTM=0.531
2024-12-05 03:24:15,680 Relaxation took 121.8s
2024-12-05 03:24:15,680 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=35.5 pTM=0.271 ipTM=0.492
2024-12-05 03:24:18,344 Done