2024-12-05 00:52:51,713 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 00:52:52,094 Running on GPU
2024-12-05 00:52:57,368 Found 6 citations for tools or databases
2024-12-05 00:52:57,369 Query 1/1: BMI1_PHC3 (length 1309)
2024-12-05 00:52:57,662 Sleeping for 6s. Reason: PENDING
2024-12-05 00:53:03,920 Sleeping for 9s. Reason: PENDING
2024-12-05 00:53:13,178 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:53:19,439 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:53:27,703 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:53:37,962 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:53:44,224 Sleeping for 9s. Reason: RUNNING
2024-12-05 00:53:53,487 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:54:03,744 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:54:08,999 Sleeping for 6s. Reason: RUNNING
2024-12-05 00:54:15,270 Sleeping for 9s. Reason: RUNNING
2024-12-05 00:54:24,533 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:54:34,789 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:54:40,047 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:55:00,912 Sleeping for 7s. Reason: PENDING
2024-12-05 00:55:08,169 Sleeping for 9s. Reason: RUNNING
2024-12-05 00:55:17,432 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:55:25,693 Sleeping for 8s. Reason: RUNNING
2024-12-05 00:55:33,956 Sleeping for 7s. Reason: RUNNING
2024-12-05 00:55:41,217 Sleeping for 10s. Reason: RUNNING
2024-12-05 00:55:51,476 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:55:56,735 Sleeping for 5s. Reason: RUNNING
2024-12-05 00:56:06,126 Setting max_seq=508, max_extra_seq=2048
2024-12-05 01:00:29,217 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=32.9 pTM=0.275 ipTM=0.504
2024-12-05 01:01:15,505 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=33.4 pTM=0.279 ipTM=0.526 tol=15.6
2024-12-05 01:02:01,942 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=34.3 pTM=0.284 ipTM=0.538 tol=8.95
2024-12-05 01:02:48,420 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=35 pTM=0.3 ipTM=0.568 tol=6.8
2024-12-05 01:03:34,947 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=35.2 pTM=0.301 ipTM=0.58 tol=5.03
2024-12-05 01:04:21,476 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=35.6 pTM=0.311 ipTM=0.598 tol=5.44
2024-12-05 01:05:08,006 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=35.5 pTM=0.308 ipTM=0.594 tol=5.51
2024-12-05 01:05:54,538 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=35.7 pTM=0.311 ipTM=0.598 tol=4.44
2024-12-05 01:06:41,068 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=35.8 pTM=0.309 ipTM=0.593 tol=3
2024-12-05 01:07:27,680 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=35.6 pTM=0.306 ipTM=0.587 tol=2.99
2024-12-05 01:08:14,207 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=35.6 pTM=0.31 ipTM=0.593 tol=3.61
2024-12-05 01:09:00,762 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=35.7 pTM=0.309 ipTM=0.588 tol=3.89
2024-12-05 01:09:47,285 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=35.7 pTM=0.307 ipTM=0.583 tol=3.31
2024-12-05 01:10:33,827 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=35.8 pTM=0.31 ipTM=0.59 tol=3.31
2024-12-05 01:11:20,353 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=35.8 pTM=0.31 ipTM=0.587 tol=2.98
2024-12-05 01:12:06,883 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=35.8 pTM=0.31 ipTM=0.59 tol=3.31
2024-12-05 01:12:53,418 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=35.8 pTM=0.31 ipTM=0.587 tol=4.05
2024-12-05 01:13:39,932 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=35.8 pTM=0.306 ipTM=0.577 tol=4.28
2024-12-05 01:14:26,464 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=35.9 pTM=0.308 ipTM=0.584 tol=3.84
2024-12-05 01:15:13,073 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=35.6 pTM=0.307 ipTM=0.579 tol=4.22
2024-12-05 01:15:59,627 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=35.4 pTM=0.306 ipTM=0.58 tol=4.93
2024-12-05 01:16:46,186 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=35.5 pTM=0.306 ipTM=0.574 tol=5
2024-12-05 01:17:32,736 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=35.6 pTM=0.31 ipTM=0.58 tol=4.03
2024-12-05 01:18:19,311 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=35.5 pTM=0.309 ipTM=0.583 tol=3.51
2024-12-05 01:19:05,872 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=35.5 pTM=0.308 ipTM=0.581 tol=3.51
2024-12-05 01:19:52,400 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=35.5 pTM=0.305 ipTM=0.578 tol=3.68
2024-12-05 01:20:38,910 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=35.4 pTM=0.307 ipTM=0.583 tol=2.85
2024-12-05 01:21:25,424 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=35.5 pTM=0.305 ipTM=0.573 tol=2.76
2024-12-05 01:22:11,957 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=35.5 pTM=0.31 ipTM=0.584 tol=3.04
2024-12-05 01:22:58,494 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=35.7 pTM=0.31 ipTM=0.59 tol=2.93
2024-12-05 01:23:45,005 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=35.7 pTM=0.311 ipTM=0.588 tol=4.39
2024-12-05 01:23:45,007 alphafold2_multimer_v3_model_1_seed_000 took 1651.3s (30 recycles)
2024-12-05 01:24:32,781 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=33.1 pTM=0.258 ipTM=0.469
2024-12-05 01:25:19,301 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=35.4 pTM=0.288 ipTM=0.527 tol=22.9
2024-12-05 01:26:05,877 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=36.2 pTM=0.308 ipTM=0.595 tol=10.6
2024-12-05 01:26:52,512 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=36.2 pTM=0.307 ipTM=0.622 tol=11.3
2024-12-05 01:27:39,119 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=36.5 pTM=0.304 ipTM=0.629 tol=7.55
2024-12-05 01:28:25,722 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=36.8 pTM=0.306 ipTM=0.635 tol=7.16
2024-12-05 01:29:12,307 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=36.9 pTM=0.306 ipTM=0.637 tol=8.41
2024-12-05 01:29:58,878 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=37.2 pTM=0.308 ipTM=0.643 tol=7.29
2024-12-05 01:30:45,460 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=37.2 pTM=0.306 ipTM=0.634 tol=8.31
2024-12-05 01:31:32,038 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=37.2 pTM=0.307 ipTM=0.63 tol=6.43
2024-12-05 01:32:18,649 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=37.2 pTM=0.307 ipTM=0.63 tol=6.93
2024-12-05 01:33:05,234 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=37.2 pTM=0.307 ipTM=0.63 tol=5.77
2024-12-05 01:33:51,808 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=37 pTM=0.306 ipTM=0.625 tol=5.66
2024-12-05 01:34:38,398 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=37.1 pTM=0.308 ipTM=0.632 tol=5.41
2024-12-05 01:35:24,968 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=37.1 pTM=0.308 ipTM=0.631 tol=6.24
2024-12-05 01:36:11,528 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=37.1 pTM=0.308 ipTM=0.629 tol=3.97
2024-12-05 01:36:58,073 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=37.2 pTM=0.306 ipTM=0.628 tol=2.81
2024-12-05 01:37:44,632 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=37.3 pTM=0.306 ipTM=0.629 tol=4.02
2024-12-05 01:38:31,203 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=37.3 pTM=0.307 ipTM=0.633 tol=3.46
2024-12-05 01:39:17,779 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=37.1 pTM=0.307 ipTM=0.631 tol=3.78
2024-12-05 01:40:04,336 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=37.1 pTM=0.306 ipTM=0.631 tol=3.9
2024-12-05 01:40:50,900 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=37 pTM=0.304 ipTM=0.625 tol=3.59
2024-12-05 01:41:37,472 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=37 pTM=0.307 ipTM=0.628 tol=3.18
2024-12-05 01:42:24,055 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=37.1 pTM=0.307 ipTM=0.63 tol=3.9
2024-12-05 01:43:10,646 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=36.9 pTM=0.304 ipTM=0.624 tol=4.21
2024-12-05 01:43:57,236 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=37.1 pTM=0.304 ipTM=0.624 tol=3.55
2024-12-05 01:44:43,811 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=37.1 pTM=0.306 ipTM=0.63 tol=3.07
2024-12-05 01:45:30,378 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=37.1 pTM=0.304 ipTM=0.622 tol=3.51
2024-12-05 01:46:16,953 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=37 pTM=0.305 ipTM=0.628 tol=2.86
2024-12-05 01:47:03,512 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=37.1 pTM=0.306 ipTM=0.633 tol=3.56
2024-12-05 01:47:50,087 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=37.2 pTM=0.304 ipTM=0.63 tol=3.7
2024-12-05 01:47:50,088 alphafold2_multimer_v3_model_2_seed_000 took 1443.8s (30 recycles)
2024-12-05 01:48:38,172 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=33.7 pTM=0.255 ipTM=0.486
2024-12-05 01:49:25,079 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=35.2 pTM=0.286 ipTM=0.609 tol=26
2024-12-05 01:50:12,122 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=35.9 pTM=0.297 ipTM=0.633 tol=14.5
2024-12-05 01:50:59,098 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=36.2 pTM=0.303 ipTM=0.635 tol=11.6
2024-12-05 01:51:46,071 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=36.6 pTM=0.31 ipTM=0.641 tol=9.83
2024-12-05 01:52:33,057 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=36.9 pTM=0.309 ipTM=0.637 tol=8.24
2024-12-05 01:53:20,040 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=37.1 pTM=0.314 ipTM=0.639 tol=11.1
2024-12-05 01:54:07,046 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=37.6 pTM=0.32 ipTM=0.646 tol=9.62
2024-12-05 01:54:54,026 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=37.7 pTM=0.322 ipTM=0.644 tol=6.52
2024-12-05 01:55:41,007 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=37.8 pTM=0.323 ipTM=0.644 tol=6.41
2024-12-05 01:56:27,973 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=37.7 pTM=0.325 ipTM=0.645 tol=6.41
2024-12-05 01:57:14,918 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=37.8 pTM=0.325 ipTM=0.644 tol=6
2024-12-05 01:58:01,896 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=37.9 pTM=0.325 ipTM=0.645 tol=7.62
2024-12-05 01:58:48,859 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=37.9 pTM=0.327 ipTM=0.647 tol=5.31
2024-12-05 01:59:35,827 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=37.9 pTM=0.327 ipTM=0.648 tol=4.64
2024-12-05 02:00:22,796 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=37.8 pTM=0.326 ipTM=0.647 tol=3.97
2024-12-05 02:01:09,760 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=37.9 pTM=0.327 ipTM=0.649 tol=3.71
2024-12-05 02:01:56,702 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=37.9 pTM=0.328 ipTM=0.651 tol=3.21
2024-12-05 02:02:43,650 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=38.1 pTM=0.329 ipTM=0.651 tol=3.96
2024-12-05 02:03:30,631 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=38 pTM=0.329 ipTM=0.651 tol=4.65
2024-12-05 02:04:17,602 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=37.9 pTM=0.329 ipTM=0.652 tol=4.12
2024-12-05 02:05:04,585 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=38.1 pTM=0.329 ipTM=0.652 tol=3.51
2024-12-05 02:05:51,575 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=38.1 pTM=0.329 ipTM=0.65 tol=2.6
2024-12-05 02:06:38,541 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=38.2 pTM=0.33 ipTM=0.654 tol=2.56
2024-12-05 02:07:25,526 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=38.2 pTM=0.33 ipTM=0.651 tol=2.71
2024-12-05 02:08:12,518 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=38.3 pTM=0.33 ipTM=0.654 tol=5.54
2024-12-05 02:08:59,515 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=38.2 pTM=0.33 ipTM=0.657 tol=4.15
2024-12-05 02:09:46,502 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=38.3 pTM=0.33 ipTM=0.654 tol=2.93
2024-12-05 02:10:33,496 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=38.2 pTM=0.33 ipTM=0.655 tol=3.25
2024-12-05 02:11:20,470 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=38.1 pTM=0.332 ipTM=0.657 tol=2.65
2024-12-05 02:12:07,445 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=38.2 pTM=0.331 ipTM=0.657 tol=2.96
2024-12-05 02:12:07,446 alphafold2_multimer_v3_model_3_seed_000 took 1456.0s (30 recycles)
2024-12-05 02:12:55,556 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=32.8 pTM=0.252 ipTM=0.477
2024-12-05 02:13:42,443 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=33.2 pTM=0.264 ipTM=0.484 tol=20.8
2024-12-05 02:14:29,294 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=33.9 pTM=0.303 ipTM=0.551 tol=19.4
2024-12-05 02:15:16,234 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=35.3 pTM=0.309 ipTM=0.597 tol=20.5
2024-12-05 02:16:03,214 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=35.5 pTM=0.297 ipTM=0.564 tol=19.8
2024-12-05 02:16:50,190 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=36.1 pTM=0.303 ipTM=0.583 tol=9.58
2024-12-05 02:17:37,202 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=35.8 pTM=0.3 ipTM=0.567 tol=13.3
2024-12-05 02:18:24,151 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=36.1 pTM=0.308 ipTM=0.593 tol=14.2
2024-12-05 02:19:11,100 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=36.2 pTM=0.302 ipTM=0.571 tol=8.44
2024-12-05 02:19:58,045 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=36.1 pTM=0.304 ipTM=0.574 tol=12.4
2024-12-05 02:20:44,992 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=36.1 pTM=0.309 ipTM=0.583 tol=6.37
2024-12-05 02:21:31,937 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=36.1 pTM=0.304 ipTM=0.572 tol=6.86
2024-12-05 02:22:18,888 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=36.2 pTM=0.307 ipTM=0.58 tol=14.6
2024-12-05 02:23:05,853 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=36.4 pTM=0.312 ipTM=0.588 tol=7.79
2024-12-05 02:23:52,834 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=36.3 pTM=0.309 ipTM=0.582 tol=5.58
2024-12-05 02:24:39,801 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=36 pTM=0.306 ipTM=0.579 tol=14.8
2024-12-05 02:25:26,744 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=36.2 pTM=0.305 ipTM=0.575 tol=12.5
2024-12-05 02:26:13,687 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=36.1 pTM=0.306 ipTM=0.573 tol=7.05
2024-12-05 02:27:00,635 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=36.2 pTM=0.306 ipTM=0.578 tol=6.05
2024-12-05 02:27:47,581 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=36.2 pTM=0.306 ipTM=0.579 tol=6.54
2024-12-05 02:28:34,514 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=36.2 pTM=0.307 ipTM=0.578 tol=4.75
2024-12-05 02:29:21,473 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=36.1 pTM=0.307 ipTM=0.58 tol=14.2
2024-12-05 02:30:08,425 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=36.1 pTM=0.308 ipTM=0.579 tol=12.6
2024-12-05 02:30:55,414 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=36.3 pTM=0.31 ipTM=0.588 tol=6.69
2024-12-05 02:31:42,421 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=36.1 pTM=0.305 ipTM=0.573 tol=14.5
2024-12-05 02:32:29,391 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=36.2 pTM=0.31 ipTM=0.585 tol=15.8
2024-12-05 02:33:16,354 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=36.2 pTM=0.308 ipTM=0.582 tol=13.6
2024-12-05 02:34:03,322 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=36.1 pTM=0.306 ipTM=0.577 tol=14.4
2024-12-05 02:34:50,308 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=36 pTM=0.308 ipTM=0.581 tol=6.71
2024-12-05 02:35:37,314 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=36.1 pTM=0.311 ipTM=0.589 tol=12.3
2024-12-05 02:36:24,334 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=36.1 pTM=0.307 ipTM=0.58 tol=13.3
2024-12-05 02:36:24,335 alphafold2_multimer_v3_model_4_seed_000 took 1455.6s (30 recycles)
2024-12-05 02:37:12,612 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=32.6 pTM=0.254 ipTM=0.497
2024-12-05 02:37:59,748 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=34.7 pTM=0.262 ipTM=0.521 tol=28.1
2024-12-05 02:38:46,916 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=34.8 pTM=0.274 ipTM=0.553 tol=19
2024-12-05 02:39:34,083 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=35.9 pTM=0.295 ipTM=0.601 tol=12.8
2024-12-05 02:40:21,229 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=36.3 pTM=0.304 ipTM=0.606 tol=10
2024-12-05 02:41:08,384 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=36.9 pTM=0.313 ipTM=0.619 tol=9.12
2024-12-05 02:41:55,545 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=37 pTM=0.316 ipTM=0.62 tol=7.48
2024-12-05 02:42:42,667 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=37.2 pTM=0.319 ipTM=0.629 tol=17.2
2024-12-05 02:43:29,768 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=37 pTM=0.318 ipTM=0.624 tol=11.8
2024-12-05 02:44:16,939 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=37.1 pTM=0.317 ipTM=0.627 tol=10.2
2024-12-05 02:45:04,077 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=37.2 pTM=0.321 ipTM=0.636 tol=13.3
2024-12-05 02:45:51,209 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=37.1 pTM=0.32 ipTM=0.63 tol=14.9
2024-12-05 02:46:38,387 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=37 pTM=0.318 ipTM=0.628 tol=7.12
2024-12-05 02:47:25,523 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=37.2 pTM=0.321 ipTM=0.632 tol=7.31
2024-12-05 02:48:12,671 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=37.2 pTM=0.32 ipTM=0.629 tol=6.75
2024-12-05 02:48:59,801 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=37.1 pTM=0.32 ipTM=0.63 tol=5.93
2024-12-05 02:49:46,934 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=37.1 pTM=0.319 ipTM=0.631 tol=6.79
2024-12-05 02:50:34,070 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=37.2 pTM=0.32 ipTM=0.631 tol=9.09
2024-12-05 02:51:21,215 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=37.2 pTM=0.318 ipTM=0.63 tol=7.04
2024-12-05 02:52:08,368 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=37.3 pTM=0.32 ipTM=0.635 tol=6.61
2024-12-05 02:52:55,551 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=37.3 pTM=0.32 ipTM=0.632 tol=13.8
2024-12-05 02:53:42,731 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=37.3 pTM=0.321 ipTM=0.637 tol=15.3
2024-12-05 02:54:29,893 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=37.2 pTM=0.32 ipTM=0.635 tol=6.48
2024-12-05 02:55:17,046 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=37.3 pTM=0.322 ipTM=0.639 tol=4.69
2024-12-05 02:56:04,256 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=37.4 pTM=0.319 ipTM=0.629 tol=14.1
2024-12-05 02:56:51,401 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=37.4 pTM=0.322 ipTM=0.635 tol=14.3
2024-12-05 02:57:38,623 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=37.4 pTM=0.321 ipTM=0.634 tol=13.8
2024-12-05 02:58:25,840 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=37.5 pTM=0.322 ipTM=0.635 tol=14
2024-12-05 02:59:13,043 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=37.2 pTM=0.32 ipTM=0.631 tol=8.38
2024-12-05 03:00:00,198 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=37.3 pTM=0.323 ipTM=0.639 tol=7.61
2024-12-05 03:00:47,354 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=37.3 pTM=0.321 ipTM=0.634 tol=5.33
2024-12-05 03:00:47,355 alphafold2_multimer_v3_model_5_seed_000 took 1461.7s (30 recycles)
2024-12-05 03:00:48,674 reranking models by 'multimer' metric
2024-12-05 03:00:50,279 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 03:04:33,370 Relaxation took 224.7s
2024-12-05 03:04:33,371 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=38.2 pTM=0.331 ipTM=0.657
2024-12-05 03:07:37,738 Relaxation took 184.4s
2024-12-05 03:07:37,738 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=37.3 pTM=0.321 ipTM=0.634
2024-12-05 03:11:20,416 Relaxation took 222.7s
2024-12-05 03:11:20,416 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=37.2 pTM=0.304 ipTM=0.63
2024-12-05 03:15:07,364 Relaxation took 226.9s
2024-12-05 03:15:07,365 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=35.7 pTM=0.311 ipTM=0.588
2024-12-05 03:43:38,784 Relaxation took 1711.4s
2024-12-05 03:43:38,785 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=36.1 pTM=0.307 ipTM=0.58
2024-12-05 03:43:42,031 Done