2024-12-05 01:19:28,577 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 01:19:28,928 Running on GPU
2024-12-05 01:19:33,243 Found 6 citations for tools or databases
2024-12-05 01:19:33,243 Query 1/1: BRCA1_IFI30 (length 2113)
2024-12-05 01:19:33,565 Sleeping for 6s. Reason: PENDING
2024-12-05 01:19:39,816 Sleeping for 9s. Reason: RUNNING
2024-12-05 01:19:49,082 Sleeping for 10s. Reason: RUNNING
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2024-12-05 01:20:13,856 Sleeping for 7s. Reason: RUNNING
2024-12-05 01:20:21,113 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:20:27,377 Sleeping for 7s. Reason: RUNNING
2024-12-05 01:20:34,636 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:20:40,890 Sleeping for 7s. Reason: RUNNING
2024-12-05 01:20:48,146 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:20:53,415 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:20:58,674 Sleeping for 7s. Reason: RUNNING
2024-12-05 01:21:05,931 Sleeping for 7s. Reason: RUNNING
2024-12-05 01:21:13,193 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:21:18,448 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:21:24,706 Sleeping for 9s. Reason: RUNNING
2024-12-05 01:21:33,961 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:21:44,227 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:21:50,483 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:22:00,740 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:22:05,997 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:22:16,254 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:22:26,515 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:22:31,772 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:22:42,032 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:22:48,286 Sleeping for 8s. Reason: RUNNING
2024-12-05 01:23:00,826 Sleeping for 9s. Reason: PENDING
2024-12-05 01:23:10,447 Sleeping for 8s. Reason: RUNNING
2024-12-05 01:23:18,709 Sleeping for 9s. Reason: RUNNING
2024-12-05 01:23:27,978 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:23:34,236 Sleeping for 8s. Reason: RUNNING
2024-12-05 01:23:42,492 Sleeping for 7s. Reason: RUNNING
2024-12-05 01:23:49,750 Sleeping for 8s. Reason: RUNNING
2024-12-05 01:23:58,010 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:24:08,280 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:24:14,541 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:24:19,794 Sleeping for 7s. Reason: RUNNING
2024-12-05 01:24:27,056 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:24:37,320 Sleeping for 7s. Reason: RUNNING
2024-12-05 01:24:44,582 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:25:02,557 Setting max_seq=508, max_extra_seq=2048
2024-12-05 01:31:29,922 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=30.2 pTM=0.287 ipTM=0.348
2024-12-05 01:33:54,473 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=30.2 pTM=0.279 ipTM=0.388 tol=25.2
2024-12-05 01:36:19,164 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=30.4 pTM=0.275 ipTM=0.333 tol=19.2
2024-12-05 01:38:43,855 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=30.6 pTM=0.274 ipTM=0.294 tol=18.1
2024-12-05 01:41:08,723 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=30.8 pTM=0.272 ipTM=0.295 tol=15.2
2024-12-05 01:43:33,592 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=30.7 pTM=0.271 ipTM=0.278 tol=17
2024-12-05 01:45:58,392 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=30.6 pTM=0.272 ipTM=0.301 tol=21.3
2024-12-05 01:48:23,108 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=30.6 pTM=0.273 ipTM=0.278 tol=19.2
2024-12-05 01:50:47,919 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=30.8 pTM=0.272 ipTM=0.299 tol=17.6
2024-12-05 01:53:12,761 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=30.6 pTM=0.272 ipTM=0.306 tol=17
2024-12-05 01:55:37,677 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=30.7 pTM=0.271 ipTM=0.298 tol=17.8
2024-12-05 01:58:02,493 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=30.7 pTM=0.272 ipTM=0.306 tol=15.8
2024-12-05 02:00:27,335 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=30.6 pTM=0.272 ipTM=0.33 tol=15.4
2024-12-05 02:02:52,155 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=30.5 pTM=0.274 ipTM=0.296 tol=18.6
2024-12-05 02:05:17,105 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=30.4 pTM=0.272 ipTM=0.279 tol=24.7
2024-12-05 02:07:42,132 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=30.6 pTM=0.272 ipTM=0.322 tol=23.5
2024-12-05 02:10:07,079 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=30.6 pTM=0.274 ipTM=0.302 tol=20
2024-12-05 02:12:32,056 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=30.7 pTM=0.271 ipTM=0.296 tol=16.1
2024-12-05 02:14:56,822 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=30.6 pTM=0.273 ipTM=0.279 tol=19.5
2024-12-05 02:17:21,569 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=30.7 pTM=0.273 ipTM=0.305 tol=16.6
2024-12-05 02:19:46,309 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=30.6 pTM=0.273 ipTM=0.281 tol=18.7
2024-12-05 02:22:11,020 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=30.7 pTM=0.273 ipTM=0.3 tol=19.7
2024-12-05 02:24:35,903 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=30.7 pTM=0.273 ipTM=0.292 tol=14.4
2024-12-05 02:27:00,655 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=30.5 pTM=0.274 ipTM=0.302 tol=16.5
2024-12-05 02:29:25,382 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=30.4 pTM=0.274 ipTM=0.28 tol=14.2
2024-12-05 02:31:50,276 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=30.4 pTM=0.273 ipTM=0.294 tol=14.6
2024-12-05 02:34:15,195 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=30.6 pTM=0.274 ipTM=0.279 tol=12.9
2024-12-05 02:36:40,260 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=30.6 pTM=0.275 ipTM=0.328 tol=15
2024-12-05 02:39:05,401 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=30.4 pTM=0.273 ipTM=0.28 tol=12.7
2024-12-05 02:41:30,439 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=30.5 pTM=0.273 ipTM=0.302 tol=17.4
2024-12-05 02:43:55,346 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=30.6 pTM=0.273 ipTM=0.28 tol=14.6
2024-12-05 02:43:55,349 alphafold2_multimer_v3_model_1_seed_000 took 4725.7s (30 recycles)
2024-12-05 02:46:23,104 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=30.9 pTM=0.29 ipTM=0.34
2024-12-05 02:48:48,040 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=31.7 pTM=0.287 ipTM=0.262 tol=25.2
2024-12-05 02:51:13,154 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=31.7 pTM=0.289 ipTM=0.271 tol=21.8
2024-12-05 02:53:38,201 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=31.9 pTM=0.293 ipTM=0.271 tol=15.8
2024-12-05 02:56:03,269 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=31.9 pTM=0.291 ipTM=0.275 tol=14.9
2024-12-05 02:58:28,472 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=31.9 pTM=0.291 ipTM=0.273 tol=17.1
2024-12-05 03:00:53,574 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=31.8 pTM=0.294 ipTM=0.274 tol=13.9
2024-12-05 03:03:18,839 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=31 pTM=0.293 ipTM=0.281 tol=33.7
2024-12-05 03:05:44,122 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=31.7 pTM=0.292 ipTM=0.264 tol=25
2024-12-05 03:08:09,243 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=31.6 pTM=0.29 ipTM=0.291 tol=16.5
2024-12-05 03:10:34,473 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=31.8 pTM=0.29 ipTM=0.261 tol=15.4
2024-12-05 03:12:59,416 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=31.7 pTM=0.292 ipTM=0.253 tol=11.4
2024-12-05 03:15:24,499 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=31.6 pTM=0.291 ipTM=0.258 tol=13.9
2024-12-05 03:17:49,637 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=31.8 pTM=0.295 ipTM=0.283 tol=12.8
2024-12-05 03:20:14,741 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=31.8 pTM=0.292 ipTM=0.262 tol=9.95
2024-12-05 03:22:40,343 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=31.8 pTM=0.292 ipTM=0.286 tol=12.4
2024-12-05 03:25:05,922 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=31.9 pTM=0.292 ipTM=0.271 tol=10.9
2024-12-05 03:27:31,105 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=31.8 pTM=0.29 ipTM=0.287 tol=10.3
2024-12-05 03:29:56,561 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=31.9 pTM=0.291 ipTM=0.28 tol=10.2
2024-12-05 03:32:21,806 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=31.9 pTM=0.291 ipTM=0.298 tol=7.77
2024-12-05 03:34:47,248 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=31.8 pTM=0.291 ipTM=0.29 tol=12.9
2024-12-05 03:37:12,747 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=32.1 pTM=0.291 ipTM=0.287 tol=12.5
2024-12-05 03:39:37,980 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=32.1 pTM=0.291 ipTM=0.29 tol=9.05
2024-12-05 03:42:03,287 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=32 pTM=0.291 ipTM=0.275 tol=7.5
2024-12-05 03:44:28,478 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=32 pTM=0.291 ipTM=0.307 tol=9.09
2024-12-05 03:46:53,606 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=32.1 pTM=0.292 ipTM=0.295 tol=8.9
2024-12-05 03:49:18,738 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=32 pTM=0.292 ipTM=0.304 tol=10.2
2024-12-05 03:51:43,897 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=31.9 pTM=0.292 ipTM=0.321 tol=12.1
2024-12-05 03:54:09,361 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=31.8 pTM=0.29 ipTM=0.309 tol=9.91
2024-12-05 03:56:34,538 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=31.7 pTM=0.291 ipTM=0.302 tol=6.81
2024-12-05 03:58:59,738 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=31.8 pTM=0.289 ipTM=0.316 tol=9.21
2024-12-05 03:58:59,740 alphafold2_multimer_v3_model_2_seed_000 took 4501.1s (30 recycles)
2024-12-05 04:01:28,036 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=30.4 pTM=0.281 ipTM=0.379
2024-12-05 04:03:53,476 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=30.7 pTM=0.275 ipTM=0.383 tol=27.2
2024-12-05 04:06:19,033 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=31.1 pTM=0.283 ipTM=0.57 tol=27.5
2024-12-05 04:08:44,499 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=30.8 pTM=0.277 ipTM=0.437 tol=29.5
2024-12-05 04:11:10,049 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=30.9 pTM=0.275 ipTM=0.409 tol=21.7
2024-12-05 04:13:35,709 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=31.3 pTM=0.288 ipTM=0.625 tol=19.2
2024-12-05 04:16:01,392 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=31.7 pTM=0.285 ipTM=0.482 tol=27.5
2024-12-05 04:18:27,083 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=31.4 pTM=0.278 ipTM=0.413 tol=29.1
2024-12-05 04:20:52,894 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=31.5 pTM=0.283 ipTM=0.298 tol=23.5
2024-12-05 04:23:18,804 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=31.3 pTM=0.278 ipTM=0.282 tol=24.3
2024-12-05 04:25:44,998 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=31.4 pTM=0.278 ipTM=0.278 tol=25.7
2024-12-05 04:28:11,084 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=31.1 pTM=0.283 ipTM=0.287 tol=19.5
2024-12-05 04:30:37,065 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=31.4 pTM=0.277 ipTM=0.281 tol=28.8
2024-12-05 04:33:02,836 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=31.4 pTM=0.279 ipTM=0.279 tol=26
2024-12-05 04:35:28,718 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=31.5 pTM=0.279 ipTM=0.288 tol=25.9
2024-12-05 04:37:54,609 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=31.2 pTM=0.275 ipTM=0.285 tol=16.5
2024-12-05 04:40:20,780 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=31.4 pTM=0.277 ipTM=0.294 tol=22.8
2024-12-05 04:42:47,103 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=31.2 pTM=0.277 ipTM=0.303 tol=23.5
2024-12-05 04:45:13,144 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=31.3 pTM=0.276 ipTM=0.29 tol=18.8
2024-12-05 04:47:38,868 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=31.2 pTM=0.275 ipTM=0.28 tol=16.3
2024-12-05 04:50:04,546 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=31.1 pTM=0.276 ipTM=0.287 tol=18
2024-12-05 04:52:30,298 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=31.3 pTM=0.276 ipTM=0.285 tol=17
2024-12-05 04:54:56,105 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=31.4 pTM=0.277 ipTM=0.29 tol=16.8
2024-12-05 04:57:22,114 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=31.2 pTM=0.276 ipTM=0.273 tol=17.6
2024-12-05 04:59:48,389 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=31.6 pTM=0.276 ipTM=0.283 tol=14.7
2024-12-05 05:02:14,679 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=31.5 pTM=0.277 ipTM=0.315 tol=24.8
2024-12-05 05:04:40,545 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=31.3 pTM=0.277 ipTM=0.285 tol=25.9
2024-12-05 05:07:06,316 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=31.5 pTM=0.277 ipTM=0.287 tol=22.4
2024-12-05 05:09:32,122 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=31.3 pTM=0.277 ipTM=0.29 tol=21
2024-12-05 05:11:58,200 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=31.5 pTM=0.277 ipTM=0.286 tol=16.1
2024-12-05 05:14:24,596 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=31.7 pTM=0.276 ipTM=0.296 tol=13.4
2024-12-05 05:14:24,598 alphafold2_multimer_v3_model_3_seed_000 took 4521.5s (30 recycles)
2024-12-05 05:16:53,473 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=29.6 pTM=0.302 ipTM=0.462
2024-12-05 05:19:19,978 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=30.5 pTM=0.295 ipTM=0.397 tol=24.7
2024-12-05 05:21:46,294 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=29.9 pTM=0.283 ipTM=0.338 tol=20.6
2024-12-05 05:24:12,408 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=30 pTM=0.282 ipTM=0.321 tol=17.5
2024-12-05 05:26:38,512 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=30.2 pTM=0.279 ipTM=0.301 tol=20.9
2024-12-05 05:29:04,607 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=30.2 pTM=0.279 ipTM=0.304 tol=16.9
2024-12-05 05:31:30,712 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=30.1 pTM=0.279 ipTM=0.303 tol=20.2
2024-12-05 05:33:56,820 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=30 pTM=0.281 ipTM=0.312 tol=19.7
2024-12-05 05:36:22,912 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=30.1 pTM=0.279 ipTM=0.3 tol=18.8
2024-12-05 05:38:48,896 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=30.1 pTM=0.279 ipTM=0.299 tol=19
2024-12-05 05:41:14,907 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=30.1 pTM=0.278 ipTM=0.294 tol=20.2
2024-12-05 05:43:41,252 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=30.1 pTM=0.28 ipTM=0.311 tol=15.1
2024-12-05 05:46:07,650 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=30 pTM=0.278 ipTM=0.301 tol=19.2
2024-12-05 05:48:33,958 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=30.1 pTM=0.279 ipTM=0.309 tol=18.5
2024-12-05 05:51:00,120 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=30 pTM=0.28 ipTM=0.308 tol=16.8
2024-12-05 05:53:26,167 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=30.1 pTM=0.284 ipTM=0.349 tol=13
2024-12-05 05:55:52,238 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=30 pTM=0.278 ipTM=0.307 tol=16.1
2024-12-05 05:58:18,110 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=30 pTM=0.277 ipTM=0.309 tol=20.5
2024-12-05 06:00:44,199 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=29.8 pTM=0.28 ipTM=0.319 tol=16.4
2024-12-05 06:03:10,477 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=30.1 pTM=0.283 ipTM=0.34 tol=15.2
2024-12-05 06:05:36,963 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=30.1 pTM=0.28 ipTM=0.322 tol=14.6
2024-12-05 06:08:03,125 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=30 pTM=0.277 ipTM=0.294 tol=15.1
2024-12-05 06:10:29,110 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=30.2 pTM=0.286 ipTM=0.363 tol=18.3
2024-12-05 06:12:55,031 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=30.1 pTM=0.28 ipTM=0.315 tol=15.5
2024-12-05 06:15:21,089 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=30 pTM=0.28 ipTM=0.308 tol=19.1
2024-12-05 06:17:47,238 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=30.2 pTM=0.277 ipTM=0.299 tol=19.8
2024-12-05 06:20:13,640 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=29.6 pTM=0.282 ipTM=0.319 tol=28.3
2024-12-05 06:22:40,244 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=29.9 pTM=0.281 ipTM=0.324 tol=25.3
2024-12-05 06:25:06,672 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=30 pTM=0.28 ipTM=0.313 tol=21.1
2024-12-05 06:27:33,197 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=30 pTM=0.278 ipTM=0.309 tol=18.9
2024-12-05 06:29:59,574 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=30.2 pTM=0.283 ipTM=0.331 tol=17.8
2024-12-05 06:29:59,577 alphafold2_multimer_v3_model_4_seed_000 took 4531.7s (30 recycles)
2024-12-05 06:32:29,116 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=30.5 pTM=0.275 ipTM=0.364
2024-12-05 06:34:55,864 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=31.2 pTM=0.272 ipTM=0.305 tol=22.4
2024-12-05 06:37:22,430 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=31.2 pTM=0.271 ipTM=0.291 tol=26.9
2024-12-05 06:39:49,063 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=31.4 pTM=0.27 ipTM=0.256 tol=19.8
2024-12-05 06:42:16,149 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=31.5 pTM=0.271 ipTM=0.264 tol=18.3
2024-12-05 06:44:43,018 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=31.6 pTM=0.269 ipTM=0.25 tol=26.7
2024-12-05 06:47:10,031 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=31.6 pTM=0.27 ipTM=0.268 tol=22.5
2024-12-05 06:49:36,949 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=31.6 pTM=0.269 ipTM=0.273 tol=24.2
2024-12-05 06:52:04,099 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=31.8 pTM=0.269 ipTM=0.263 tol=26.4
2024-12-05 06:54:31,118 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=31.7 pTM=0.269 ipTM=0.287 tol=22.5
2024-12-05 06:56:57,974 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=31.8 pTM=0.271 ipTM=0.274 tol=26.2
2024-12-05 06:59:24,731 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=31.6 pTM=0.27 ipTM=0.308 tol=15.6
2024-12-05 07:01:51,381 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=31.7 pTM=0.27 ipTM=0.281 tol=18.3
2024-12-05 07:04:18,064 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=31.7 pTM=0.27 ipTM=0.297 tol=18.3
2024-12-05 07:06:44,772 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=31.9 pTM=0.27 ipTM=0.269 tol=21.9
2024-12-05 07:09:11,440 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=31.7 pTM=0.271 ipTM=0.343 tol=20.8
2024-12-05 07:11:38,020 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=31.6 pTM=0.27 ipTM=0.268 tol=20.5
2024-12-05 07:14:04,585 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=31.7 pTM=0.27 ipTM=0.329 tol=20
2024-12-05 07:16:31,308 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=31.6 pTM=0.27 ipTM=0.261 tol=19.9
2024-12-05 07:18:58,148 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=31.7 pTM=0.271 ipTM=0.314 tol=19.5
2024-12-05 07:21:24,839 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=31.6 pTM=0.27 ipTM=0.279 tol=20.8
2024-12-05 07:23:51,648 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=31.7 pTM=0.271 ipTM=0.323 tol=19.5
2024-12-05 07:26:18,441 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=31.8 pTM=0.271 ipTM=0.283 tol=20.2
2024-12-05 07:28:45,273 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=31.6 pTM=0.272 ipTM=0.336 tol=22
2024-12-05 07:31:12,121 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=32 pTM=0.27 ipTM=0.282 tol=17
2024-12-05 07:33:38,832 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=31.7 pTM=0.271 ipTM=0.325 tol=21.9
2024-12-05 07:36:05,721 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=31.9 pTM=0.272 ipTM=0.27 tol=13.3
2024-12-05 07:38:32,372 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=31.7 pTM=0.273 ipTM=0.325 tol=13.8
2024-12-05 07:40:59,121 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=31.8 pTM=0.273 ipTM=0.278 tol=26.4
2024-12-05 07:43:25,923 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=31.5 pTM=0.273 ipTM=0.307 tol=19.4
2024-12-05 07:45:52,758 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=31.7 pTM=0.272 ipTM=0.278 tol=18
2024-12-05 07:45:52,760 alphafold2_multimer_v3_model_5_seed_000 took 4549.9s (30 recycles)
2024-12-05 07:45:56,038 reranking models by 'multimer' metric
2024-12-05 07:46:00,549 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 07:57:08,204 Relaxation took 672.2s
2024-12-05 07:57:08,205 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=30.2 pTM=0.283 ipTM=0.331
2024-12-05 08:08:00,153 Relaxation took 651.9s
2024-12-05 08:08:00,153 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=31.8 pTM=0.289 ipTM=0.316
2024-12-05 08:17:04,354 Relaxation took 544.2s
2024-12-05 08:17:04,354 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=31.7 pTM=0.276 ipTM=0.296
2024-12-05 08:27:29,140 Relaxation took 624.8s
2024-12-05 08:27:29,141 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=30.6 pTM=0.273 ipTM=0.28
2024-12-05 08:41:21,358 Relaxation took 832.2s
2024-12-05 08:41:21,358 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=31.7 pTM=0.272 ipTM=0.278
2024-12-05 08:41:28,148 Done