2024-12-05 01:22:14,958 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 01:22:15,274 Running on GPU
2024-12-05 01:22:19,739 Found 6 citations for tools or databases
2024-12-05 01:22:19,739 Query 1/1: BTBD1_ARHGEF4 (length 1172)
2024-12-05 01:22:20,036 Sleeping for 7s. Reason: PENDING
2024-12-05 01:22:27,298 Sleeping for 7s. Reason: RUNNING
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2024-12-05 01:23:26,358 Sleeping for 9s. Reason: RUNNING
2024-12-05 01:23:35,620 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:23:45,881 Sleeping for 9s. Reason: RUNNING
2024-12-05 01:23:55,144 Sleeping for 8s. Reason: RUNNING
2024-12-05 01:24:03,397 Sleeping for 7s. Reason: RUNNING
2024-12-05 01:24:10,657 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:24:20,917 Sleeping for 7s. Reason: RUNNING
2024-12-05 01:24:28,171 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:24:33,421 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:24:38,672 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:24:44,924 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:24:51,175 Sleeping for 8s. Reason: RUNNING
2024-12-05 01:24:59,437 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:25:04,691 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:25:10,950 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:25:16,204 Sleeping for 8s. Reason: RUNNING
2024-12-05 01:25:24,459 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:25:38,097 Sleeping for 10s. Reason: PENDING
2024-12-05 01:25:48,356 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:25:54,608 Sleeping for 8s. Reason: RUNNING
2024-12-05 01:26:02,882 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:26:09,141 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:26:14,393 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:26:24,661 Sleeping for 7s. Reason: RUNNING
2024-12-05 01:26:31,913 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:26:42,178 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:26:47,430 Sleeping for 5s. Reason: RUNNING
2024-12-05 01:26:52,683 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:26:58,937 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:27:09,195 Sleeping for 8s. Reason: RUNNING
2024-12-05 01:27:17,447 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:27:27,710 Sleeping for 8s. Reason: RUNNING
2024-12-05 01:27:35,975 Sleeping for 6s. Reason: RUNNING
2024-12-05 01:27:42,230 Sleeping for 8s. Reason: RUNNING
2024-12-05 01:27:50,488 Sleeping for 10s. Reason: RUNNING
2024-12-05 01:28:04,985 Setting max_seq=508, max_extra_seq=2048
2024-12-05 01:30:44,367 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.7 pTM=0.425 ipTM=0.337
2024-12-05 01:31:17,389 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.6 pTM=0.401 ipTM=0.327 tol=9.04
2024-12-05 01:31:50,588 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.1 pTM=0.381 ipTM=0.27 tol=7.54
2024-12-05 01:32:23,876 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.8 pTM=0.357 ipTM=0.241 tol=10.4
2024-12-05 01:32:57,214 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.4 pTM=0.355 ipTM=0.234 tol=6.06
2024-12-05 01:33:30,575 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.3 pTM=0.354 ipTM=0.235 tol=4.21
2024-12-05 01:34:03,998 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.3 pTM=0.355 ipTM=0.234 tol=2.6
2024-12-05 01:34:37,448 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.5 pTM=0.357 ipTM=0.247 tol=3.89
2024-12-05 01:35:10,905 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=63.2 pTM=0.361 ipTM=0.239 tol=3.85
2024-12-05 01:35:44,380 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.2 pTM=0.348 ipTM=0.226 tol=2.98
2024-12-05 01:36:17,858 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.6 pTM=0.359 ipTM=0.237 tol=1.97
2024-12-05 01:36:51,317 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.3 pTM=0.35 ipTM=0.227 tol=2.42
2024-12-05 01:37:24,758 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.5 pTM=0.361 ipTM=0.239 tol=3.07
2024-12-05 01:37:58,245 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.2 pTM=0.347 ipTM=0.224 tol=2.84
2024-12-05 01:38:31,699 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.1 pTM=0.357 ipTM=0.233 tol=2.57
2024-12-05 01:39:05,149 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.3 pTM=0.348 ipTM=0.222 tol=2.94
2024-12-05 01:39:38,589 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.8 pTM=0.363 ipTM=0.24 tol=4.9
2024-12-05 01:40:12,000 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.3 pTM=0.354 ipTM=0.234 tol=4.77
2024-12-05 01:40:45,409 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.7 pTM=0.364 ipTM=0.242 tol=1.98
2024-12-05 01:41:18,831 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.3 pTM=0.357 ipTM=0.242 tol=2.21
2024-12-05 01:41:52,235 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.6 pTM=0.369 ipTM=0.25 tol=1.96
2024-12-05 01:42:25,631 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.6 pTM=0.358 ipTM=0.247 tol=2
2024-12-05 01:42:59,017 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64 pTM=0.37 ipTM=0.262 tol=2.47
2024-12-05 01:43:32,444 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.5 pTM=0.363 ipTM=0.257 tol=2.66
2024-12-05 01:44:05,849 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.8 pTM=0.374 ipTM=0.257 tol=3.01
2024-12-05 01:44:39,252 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.7 pTM=0.358 ipTM=0.245 tol=2.16
2024-12-05 01:45:12,694 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.6 pTM=0.367 ipTM=0.251 tol=2.34
2024-12-05 01:45:46,145 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.1 pTM=0.353 ipTM=0.246 tol=5.73
2024-12-05 01:46:19,610 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.4 pTM=0.369 ipTM=0.263 tol=5.29
2024-12-05 01:46:53,074 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.1 pTM=0.361 ipTM=0.262 tol=3.25
2024-12-05 01:47:26,541 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.8 pTM=0.372 ipTM=0.262 tol=3.89
2024-12-05 01:47:26,542 alphafold2_multimer_v3_model_1_seed_000 took 1156.5s (30 recycles)
2024-12-05 01:48:00,824 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.9 pTM=0.386 ipTM=0.299
2024-12-05 01:48:34,260 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.5 pTM=0.388 ipTM=0.301 tol=8.35
2024-12-05 01:49:07,705 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.1 pTM=0.381 ipTM=0.266 tol=5.73
2024-12-05 01:49:41,138 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.8 pTM=0.363 ipTM=0.238 tol=3.96
2024-12-05 01:50:14,605 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.8 pTM=0.362 ipTM=0.225 tol=3.3
2024-12-05 01:50:48,096 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.4 pTM=0.352 ipTM=0.208 tol=3.66
2024-12-05 01:51:21,535 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.5 pTM=0.356 ipTM=0.218 tol=5.71
2024-12-05 01:51:55,006 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.1 pTM=0.352 ipTM=0.222 tol=2.45
2024-12-05 01:52:28,459 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.3 pTM=0.357 ipTM=0.215 tol=4.52
2024-12-05 01:53:01,927 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.1 pTM=0.349 ipTM=0.206 tol=2.7
2024-12-05 01:53:35,417 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.6 pTM=0.357 ipTM=0.215 tol=2.94
2024-12-05 01:54:08,946 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.2 pTM=0.354 ipTM=0.216 tol=3.71
2024-12-05 01:54:42,443 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.2 pTM=0.355 ipTM=0.213 tol=3.7
2024-12-05 01:55:15,961 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.2 pTM=0.35 ipTM=0.209 tol=3.81
2024-12-05 01:55:49,467 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.2 pTM=0.354 ipTM=0.211 tol=3.66
2024-12-05 01:56:22,979 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.1 pTM=0.349 ipTM=0.213 tol=3.6
2024-12-05 01:56:56,469 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.2 pTM=0.35 ipTM=0.205 tol=3.26
2024-12-05 01:57:29,965 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.1 pTM=0.347 ipTM=0.206 tol=2.4
2024-12-05 01:58:03,453 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.3 pTM=0.354 ipTM=0.212 tol=2.41
2024-12-05 01:58:36,935 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.3 pTM=0.351 ipTM=0.209 tol=2.33
2024-12-05 01:59:10,403 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.3 pTM=0.353 ipTM=0.21 tol=2.53
2024-12-05 01:59:43,863 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.1 pTM=0.345 ipTM=0.202 tol=2.09
2024-12-05 02:00:17,305 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.6 pTM=0.353 ipTM=0.209 tol=2.1
2024-12-05 02:00:50,788 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.2 pTM=0.347 ipTM=0.211 tol=2.91
2024-12-05 02:01:24,264 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.3 pTM=0.35 ipTM=0.207 tol=3.6
2024-12-05 02:01:57,724 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.2 pTM=0.348 ipTM=0.207 tol=2.47
2024-12-05 02:02:31,176 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.2 pTM=0.353 ipTM=0.214 tol=1.85
2024-12-05 02:03:04,659 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.1 pTM=0.35 ipTM=0.218 tol=2.79
2024-12-05 02:03:38,123 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.2 pTM=0.358 ipTM=0.218 tol=2.64
2024-12-05 02:04:11,612 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.1 pTM=0.349 ipTM=0.21 tol=3.5
2024-12-05 02:04:45,096 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.4 pTM=0.354 ipTM=0.218 tol=2.85
2024-12-05 02:04:45,097 alphafold2_multimer_v3_model_2_seed_000 took 1037.7s (30 recycles)
2024-12-05 02:05:19,475 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.4 pTM=0.373 ipTM=0.191
2024-12-05 02:05:53,049 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.9 pTM=0.339 ipTM=0.17 tol=9.71
2024-12-05 02:06:26,661 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66 pTM=0.341 ipTM=0.186 tol=9.95
2024-12-05 02:07:00,266 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.1 pTM=0.335 ipTM=0.176 tol=5.71
2024-12-05 02:07:33,900 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.6 pTM=0.338 ipTM=0.176 tol=12.7
2024-12-05 02:08:07,506 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.8 pTM=0.343 ipTM=0.182 tol=13.2
2024-12-05 02:08:41,080 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.8 pTM=0.344 ipTM=0.171 tol=4.45
2024-12-05 02:09:14,631 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.6 pTM=0.342 ipTM=0.177 tol=4.51
2024-12-05 02:09:48,304 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.2 pTM=0.337 ipTM=0.172 tol=12.1
2024-12-05 02:10:21,922 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.8 pTM=0.342 ipTM=0.177 tol=11.9
2024-12-05 02:10:55,574 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.3 pTM=0.337 ipTM=0.166 tol=7.09
2024-12-05 02:11:29,227 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66 pTM=0.342 ipTM=0.172 tol=7.96
2024-12-05 02:12:02,888 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.5 pTM=0.338 ipTM=0.163 tol=13
2024-12-05 02:12:36,498 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.6 pTM=0.344 ipTM=0.181 tol=13.4
2024-12-05 02:13:10,063 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.4 pTM=0.348 ipTM=0.186 tol=3.97
2024-12-05 02:13:43,632 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.8 pTM=0.337 ipTM=0.181 tol=2.85
2024-12-05 02:14:17,239 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.9 pTM=0.335 ipTM=0.185 tol=15.8
2024-12-05 02:14:50,837 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.6 pTM=0.341 ipTM=0.177 tol=14.8
2024-12-05 02:15:24,432 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.4 pTM=0.337 ipTM=0.165 tol=9.01
2024-12-05 02:15:58,015 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.9 pTM=0.345 ipTM=0.178 tol=10.8
2024-12-05 02:16:31,609 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.9 pTM=0.343 ipTM=0.175 tol=6.18
2024-12-05 02:17:05,183 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.8 pTM=0.337 ipTM=0.178 tol=3.25
2024-12-05 02:17:38,777 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.7 pTM=0.34 ipTM=0.167 tol=13.8
2024-12-05 02:18:12,370 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.9 pTM=0.343 ipTM=0.163 tol=12.9
2024-12-05 02:18:45,969 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.2 pTM=0.339 ipTM=0.158 tol=7.23
2024-12-05 02:19:19,579 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.9 pTM=0.348 ipTM=0.181 tol=12.6
2024-12-05 02:19:53,132 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.4 pTM=0.344 ipTM=0.184 tol=5.25
2024-12-05 02:20:26,709 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.6 pTM=0.338 ipTM=0.171 tol=2.66
2024-12-05 02:21:00,336 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.1 pTM=0.335 ipTM=0.158 tol=13.1
2024-12-05 02:21:33,898 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.5 pTM=0.345 ipTM=0.178 tol=13.2
2024-12-05 02:22:07,449 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.6 pTM=0.347 ipTM=0.186 tol=4.78
2024-12-05 02:22:07,450 alphafold2_multimer_v3_model_3_seed_000 took 1041.5s (30 recycles)
2024-12-05 02:22:41,738 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.8 pTM=0.409 ipTM=0.333
2024-12-05 02:23:15,142 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.5 pTM=0.461 ipTM=0.465 tol=14.7
2024-12-05 02:23:48,559 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.4 pTM=0.478 ipTM=0.479 tol=11.5
2024-12-05 02:24:21,956 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.7 pTM=0.461 ipTM=0.463 tol=6.51
2024-12-05 02:24:55,357 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.5 pTM=0.46 ipTM=0.453 tol=6.16
2024-12-05 02:25:28,790 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.6 pTM=0.454 ipTM=0.451 tol=3.57
2024-12-05 02:26:02,233 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.7 pTM=0.464 ipTM=0.463 tol=2.86
2024-12-05 02:26:35,664 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.6 pTM=0.448 ipTM=0.443 tol=1.83
2024-12-05 02:27:09,115 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.8 pTM=0.456 ipTM=0.441 tol=2.7
2024-12-05 02:27:42,559 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.4 pTM=0.44 ipTM=0.421 tol=1.68
2024-12-05 02:28:15,992 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67 pTM=0.453 ipTM=0.447 tol=5.03
2024-12-05 02:28:49,374 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.4 pTM=0.454 ipTM=0.435 tol=5.99
2024-12-05 02:29:22,735 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68 pTM=0.464 ipTM=0.457 tol=2.56
2024-12-05 02:29:56,071 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67.4 pTM=0.45 ipTM=0.429 tol=2.13
2024-12-05 02:30:29,407 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.4 pTM=0.452 ipTM=0.431 tol=1.85
2024-12-05 02:31:02,738 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.7 pTM=0.461 ipTM=0.442 tol=1.94
2024-12-05 02:31:36,098 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.9 pTM=0.462 ipTM=0.453 tol=1.47
2024-12-05 02:32:09,425 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67.6 pTM=0.457 ipTM=0.438 tol=3.02
2024-12-05 02:32:42,730 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68 pTM=0.471 ipTM=0.466 tol=3.05
2024-12-05 02:33:16,057 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.1 pTM=0.469 ipTM=0.46 tol=1.65
2024-12-05 02:33:49,408 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.7 pTM=0.465 ipTM=0.456 tol=1.7
2024-12-05 02:34:22,763 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.7 pTM=0.465 ipTM=0.458 tol=0.96
2024-12-05 02:34:56,096 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.8 pTM=0.463 ipTM=0.458 tol=1.27
2024-12-05 02:35:29,474 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.8 pTM=0.464 ipTM=0.463 tol=1.27
2024-12-05 02:36:02,875 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67.8 pTM=0.46 ipTM=0.449 tol=1.46
2024-12-05 02:36:36,272 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.8 pTM=0.456 ipTM=0.435 tol=0.904
2024-12-05 02:37:09,627 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.9 pTM=0.449 ipTM=0.426 tol=1.29
2024-12-05 02:37:42,991 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.4 pTM=0.45 ipTM=0.426 tol=1.09
2024-12-05 02:38:16,359 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67 pTM=0.447 ipTM=0.422 tol=1.13
2024-12-05 02:38:49,733 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.5 pTM=0.454 ipTM=0.437 tol=1.37
2024-12-05 02:39:23,116 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67.5 pTM=0.458 ipTM=0.445 tol=1.25
2024-12-05 02:39:23,117 alphafold2_multimer_v3_model_4_seed_000 took 1034.8s (30 recycles)
2024-12-05 02:39:57,520 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.2 pTM=0.393 ipTM=0.226
2024-12-05 02:40:31,121 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.4 pTM=0.355 ipTM=0.164 tol=14.2
2024-12-05 02:41:04,725 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.2 pTM=0.346 ipTM=0.172 tol=11.5
2024-12-05 02:41:38,369 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.3 pTM=0.342 ipTM=0.164 tol=6.59
2024-12-05 02:42:11,990 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.4 pTM=0.342 ipTM=0.165 tol=9.16
2024-12-05 02:42:45,658 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.6 pTM=0.333 ipTM=0.143 tol=15.2
2024-12-05 02:43:19,292 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.3 pTM=0.346 ipTM=0.171 tol=14.2
2024-12-05 02:43:52,886 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.1 pTM=0.35 ipTM=0.186 tol=5.14
2024-12-05 02:44:26,468 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.3 pTM=0.34 ipTM=0.167 tol=4.97
2024-12-05 02:45:00,115 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.6 pTM=0.333 ipTM=0.15 tol=7.71
2024-12-05 02:45:33,725 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.6 pTM=0.34 ipTM=0.162 tol=9.2
2024-12-05 02:46:07,306 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.3 pTM=0.343 ipTM=0.173 tol=8.48
2024-12-05 02:46:40,881 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.4 pTM=0.351 ipTM=0.194 tol=8.03
2024-12-05 02:47:14,480 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.3 pTM=0.348 ipTM=0.185 tol=6.04
2024-12-05 02:47:48,023 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.2 pTM=0.358 ipTM=0.209 tol=6.48
2024-12-05 02:48:21,575 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.6 pTM=0.35 ipTM=0.177 tol=7.09
2024-12-05 02:48:55,134 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.6 pTM=0.344 ipTM=0.182 tol=6.43
2024-12-05 02:49:28,732 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.1 pTM=0.346 ipTM=0.179 tol=10.7
2024-12-05 02:50:02,353 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.9 pTM=0.342 ipTM=0.182 tol=7.92
2024-12-05 02:50:36,016 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.6 pTM=0.347 ipTM=0.18 tol=7.31
2024-12-05 02:51:09,631 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.1 pTM=0.344 ipTM=0.185 tol=11.6
2024-12-05 02:51:43,253 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.9 pTM=0.339 ipTM=0.181 tol=9.76
2024-12-05 02:52:16,853 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.8 pTM=0.352 ipTM=0.185 tol=12.1
2024-12-05 02:52:50,425 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.5 pTM=0.36 ipTM=0.198 tol=7.19
2024-12-05 02:53:23,980 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.6 pTM=0.362 ipTM=0.2 tol=6.13
2024-12-05 02:53:57,546 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.6 pTM=0.361 ipTM=0.198 tol=3.86
2024-12-05 02:54:31,087 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.2 pTM=0.36 ipTM=0.191 tol=3.86
2024-12-05 02:55:04,650 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.4 pTM=0.35 ipTM=0.178 tol=3.21
2024-12-05 02:55:38,177 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.6 pTM=0.375 ipTM=0.215 tol=4.54
2024-12-05 02:56:11,697 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.4 pTM=0.356 ipTM=0.189 tol=5.92
2024-12-05 02:56:45,228 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.6 pTM=0.354 ipTM=0.182 tol=4.84
2024-12-05 02:56:45,229 alphafold2_multimer_v3_model_5_seed_000 took 1041.3s (30 recycles)
2024-12-05 02:56:46,069 reranking models by 'multimer' metric
2024-12-05 02:56:49,870 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 02:58:34,068 Relaxation took 108.0s
2024-12-05 02:58:34,068 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67.5 pTM=0.458 ipTM=0.445
2024-12-05 03:00:41,135 Relaxation took 127.1s
2024-12-05 03:00:41,135 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.8 pTM=0.372 ipTM=0.262
2024-12-05 03:03:37,831 Relaxation took 176.7s
2024-12-05 03:03:37,831 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.4 pTM=0.354 ipTM=0.218
2024-12-05 03:06:11,216 Relaxation took 153.4s
2024-12-05 03:06:11,216 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.6 pTM=0.347 ipTM=0.186
2024-12-05 03:07:51,782 Relaxation took 100.6s
2024-12-05 03:07:51,782 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.6 pTM=0.354 ipTM=0.182
2024-12-05 03:07:53,983 Done