2024-12-05 03:22:27,372 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 03:22:27,756 Running on GPU
2024-12-05 03:22:31,788 Found 6 citations for tools or databases
2024-12-05 03:22:31,789 Query 1/1: BTRC_NFKB1 (length 1573)
2024-12-05 03:22:32,074 Sleeping for 8s. Reason: PENDING
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2024-12-05 03:25:54,803 Sleeping for 5s. Reason: RUNNING
2024-12-05 03:26:01,783 Sleeping for 10s. Reason: PENDING
2024-12-05 03:26:12,054 Sleeping for 5s. Reason: RUNNING
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2024-12-05 03:26:40,086 Sleeping for 9s. Reason: RUNNING
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2024-12-05 03:26:55,609 Sleeping for 7s. Reason: RUNNING
2024-12-05 03:27:02,864 Sleeping for 8s. Reason: RUNNING
2024-12-05 03:27:11,119 Sleeping for 8s. Reason: RUNNING
2024-12-05 03:27:19,378 Sleeping for 8s. Reason: RUNNING
2024-12-05 03:27:27,639 Sleeping for 6s. Reason: RUNNING
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2024-12-05 03:28:03,942 Sleeping for 5s. Reason: RUNNING
2024-12-05 03:28:09,196 Sleeping for 10s. Reason: RUNNING
2024-12-05 03:28:19,467 Sleeping for 7s. Reason: RUNNING
2024-12-05 03:28:26,729 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:28:46,579 Setting max_seq=508, max_extra_seq=2048
2024-12-05 03:33:52,372 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.4 pTM=0.416 ipTM=0.269
2024-12-05 03:35:03,808 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.9 pTM=0.388 ipTM=0.257 tol=15.6
2024-12-05 03:36:15,490 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.1 pTM=0.413 ipTM=0.274 tol=8.45
2024-12-05 03:37:27,139 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.7 pTM=0.396 ipTM=0.243 tol=6.48
2024-12-05 03:38:38,812 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.6 pTM=0.38 ipTM=0.227 tol=5.46
2024-12-05 03:39:50,609 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.4 pTM=0.375 ipTM=0.219 tol=4.95
2024-12-05 03:41:02,390 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.6 pTM=0.376 ipTM=0.219 tol=6.42
2024-12-05 03:42:14,213 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.5 pTM=0.374 ipTM=0.213 tol=4.24
2024-12-05 03:43:25,989 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.2 pTM=0.374 ipTM=0.214 tol=2.83
2024-12-05 03:44:37,738 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.2 pTM=0.373 ipTM=0.214 tol=4.69
2024-12-05 03:45:49,424 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.4 pTM=0.377 ipTM=0.217 tol=4.91
2024-12-05 03:47:01,142 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.4 pTM=0.378 ipTM=0.217 tol=4.71
2024-12-05 03:48:12,846 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.5 pTM=0.38 ipTM=0.214 tol=3.79
2024-12-05 03:49:24,554 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.2 pTM=0.379 ipTM=0.212 tol=4.3
2024-12-05 03:50:36,278 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.2 pTM=0.38 ipTM=0.213 tol=3.93
2024-12-05 03:51:48,022 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.2 pTM=0.38 ipTM=0.212 tol=4.21
2024-12-05 03:52:59,822 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.4 pTM=0.382 ipTM=0.215 tol=4.53
2024-12-05 03:54:11,711 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.4 pTM=0.38 ipTM=0.213 tol=3.86
2024-12-05 03:55:23,422 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.3 pTM=0.381 ipTM=0.214 tol=3.89
2024-12-05 03:56:35,178 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.2 pTM=0.381 ipTM=0.214 tol=4.29
2024-12-05 03:57:46,884 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.1 pTM=0.381 ipTM=0.214 tol=4.41
2024-12-05 03:58:58,640 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.3 pTM=0.382 ipTM=0.215 tol=2.82
2024-12-05 04:00:10,312 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.2 pTM=0.382 ipTM=0.219 tol=4.04
2024-12-05 04:01:21,981 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.3 pTM=0.381 ipTM=0.217 tol=2.74
2024-12-05 04:02:33,607 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.1 pTM=0.38 ipTM=0.214 tol=4.44
2024-12-05 04:03:45,212 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.9 pTM=0.381 ipTM=0.22 tol=4.69
2024-12-05 04:04:56,792 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.6 pTM=0.387 ipTM=0.231 tol=5.74
2024-12-05 04:06:08,339 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.6 pTM=0.387 ipTM=0.242 tol=4.69
2024-12-05 04:07:19,831 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.1 pTM=0.392 ipTM=0.267 tol=10.7
2024-12-05 04:08:31,303 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.8 pTM=0.386 ipTM=0.242 tol=5.28
2024-12-05 04:09:42,836 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.1 pTM=0.379 ipTM=0.223 tol=9.14
2024-12-05 04:09:42,838 alphafold2_multimer_v3_model_1_seed_000 took 2449.0s (30 recycles)
2024-12-05 04:10:56,234 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.2 pTM=0.45 ipTM=0.398
2024-12-05 04:12:07,956 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.9 pTM=0.43 ipTM=0.399 tol=12
2024-12-05 04:13:19,734 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.2 pTM=0.378 ipTM=0.258 tol=10.8
2024-12-05 04:14:31,532 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.1 pTM=0.419 ipTM=0.367 tol=19.1
2024-12-05 04:15:43,312 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.7 pTM=0.428 ipTM=0.397 tol=9.71
2024-12-05 04:16:55,099 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.2 pTM=0.402 ipTM=0.324 tol=8.78
2024-12-05 04:18:06,959 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.8 pTM=0.429 ipTM=0.416 tol=20
2024-12-05 04:19:18,864 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.9 pTM=0.371 ipTM=0.223 tol=9.22
2024-12-05 04:20:30,799 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66 pTM=0.371 ipTM=0.228 tol=11
2024-12-05 04:21:42,748 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.1 pTM=0.371 ipTM=0.227 tol=5.18
2024-12-05 04:22:54,694 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.2 pTM=0.375 ipTM=0.269 tol=4.1
2024-12-05 04:24:06,641 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.4 pTM=0.382 ipTM=0.275 tol=5.12
2024-12-05 04:25:18,625 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.4 pTM=0.376 ipTM=0.255 tol=4.88
2024-12-05 04:26:30,664 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.3 pTM=0.376 ipTM=0.243 tol=3.95
2024-12-05 04:27:42,629 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.1 pTM=0.372 ipTM=0.229 tol=7.92
2024-12-05 04:28:54,569 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.8 pTM=0.372 ipTM=0.229 tol=4.69
2024-12-05 04:30:06,445 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.3 pTM=0.43 ipTM=0.437 tol=9.48
2024-12-05 04:31:18,398 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.2 pTM=0.368 ipTM=0.219 tol=7.51
2024-12-05 04:32:30,161 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.2 pTM=0.39 ipTM=0.292 tol=13.8
2024-12-05 04:33:41,910 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.9 pTM=0.424 ipTM=0.377 tol=9.16
2024-12-05 04:34:53,838 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.1 pTM=0.375 ipTM=0.245 tol=11.1
2024-12-05 04:36:05,797 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.6 pTM=0.387 ipTM=0.272 tol=10.6
2024-12-05 04:37:17,734 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.6 pTM=0.385 ipTM=0.277 tol=5.69
2024-12-05 04:38:29,745 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.3 pTM=0.375 ipTM=0.238 tol=4.57
2024-12-05 04:39:41,768 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.5 pTM=0.401 ipTM=0.317 tol=18.6
2024-12-05 04:40:53,712 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.7 pTM=0.404 ipTM=0.319 tol=8.12
2024-12-05 04:42:05,832 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.2 pTM=0.376 ipTM=0.252 tol=16
2024-12-05 04:43:17,887 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.2 pTM=0.375 ipTM=0.252 tol=10
2024-12-05 04:44:29,852 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.3 pTM=0.373 ipTM=0.239 tol=6.42
2024-12-05 04:45:41,757 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.5 pTM=0.39 ipTM=0.277 tol=15.9
2024-12-05 04:46:53,534 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.8 pTM=0.41 ipTM=0.344 tol=5.84
2024-12-05 04:46:53,536 alphafold2_multimer_v3_model_2_seed_000 took 2228.8s (30 recycles)
2024-12-05 04:48:07,271 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.4 pTM=0.401 ipTM=0.271
2024-12-05 04:49:19,003 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.2 pTM=0.434 ipTM=0.389 tol=12.2
2024-12-05 04:50:30,825 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.6 pTM=0.384 ipTM=0.235 tol=9.88
2024-12-05 04:51:42,547 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.8 pTM=0.389 ipTM=0.236 tol=13.7
2024-12-05 04:52:54,165 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.1 pTM=0.422 ipTM=0.233 tol=8.35
2024-12-05 04:54:05,859 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.1 pTM=0.391 ipTM=0.216 tol=7.48
2024-12-05 04:55:17,556 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.2 pTM=0.393 ipTM=0.206 tol=8.34
2024-12-05 04:56:29,280 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.1 pTM=0.399 ipTM=0.218 tol=3.53
2024-12-05 04:57:41,036 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.1 pTM=0.402 ipTM=0.232 tol=2.56
2024-12-05 04:58:52,841 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.4 pTM=0.409 ipTM=0.291 tol=3.76
2024-12-05 05:00:04,635 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.4 pTM=0.411 ipTM=0.309 tol=4.08
2024-12-05 05:01:16,458 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.2 pTM=0.407 ipTM=0.278 tol=2.54
2024-12-05 05:02:28,202 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.8 pTM=0.415 ipTM=0.321 tol=7.12
2024-12-05 05:03:39,839 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.7 pTM=0.412 ipTM=0.274 tol=2.16
2024-12-05 05:04:51,414 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.2 pTM=0.411 ipTM=0.294 tol=2.45
2024-12-05 05:06:02,979 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.4 pTM=0.416 ipTM=0.32 tol=1.38
2024-12-05 05:07:14,507 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.8 pTM=0.419 ipTM=0.294 tol=2.04
2024-12-05 05:08:26,061 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.6 pTM=0.418 ipTM=0.309 tol=2.03
2024-12-05 05:09:37,621 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.6 pTM=0.416 ipTM=0.268 tol=1.7
2024-12-05 05:10:49,231 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.6 pTM=0.417 ipTM=0.295 tol=2.09
2024-12-05 05:12:00,895 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.5 pTM=0.418 ipTM=0.303 tol=2.39
2024-12-05 05:13:12,617 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.7 pTM=0.416 ipTM=0.28 tol=1.52
2024-12-05 05:14:24,369 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.4 pTM=0.415 ipTM=0.282 tol=1.85
2024-12-05 05:15:36,150 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.7 pTM=0.416 ipTM=0.302 tol=1.87
2024-12-05 05:16:47,956 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.5 pTM=0.41 ipTM=0.27 tol=1.75
2024-12-05 05:17:59,763 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.6 pTM=0.412 ipTM=0.28 tol=1.51
2024-12-05 05:19:11,561 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.5 pTM=0.411 ipTM=0.297 tol=1.57
2024-12-05 05:20:23,308 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.6 pTM=0.415 ipTM=0.32 tol=4.13
2024-12-05 05:21:35,035 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.4 pTM=0.411 ipTM=0.274 tol=5.35
2024-12-05 05:22:46,716 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.6 pTM=0.412 ipTM=0.303 tol=3.22
2024-12-05 05:23:58,323 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.5 pTM=0.415 ipTM=0.309 tol=2.6
2024-12-05 05:23:58,324 alphafold2_multimer_v3_model_3_seed_000 took 2222.9s (30 recycles)
2024-12-05 05:25:12,335 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.3 pTM=0.38 ipTM=0.218
2024-12-05 05:26:24,014 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65 pTM=0.45 ipTM=0.337 tol=24.6
2024-12-05 05:27:35,624 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.8 pTM=0.444 ipTM=0.322 tol=8.31
2024-12-05 05:28:47,205 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.8 pTM=0.442 ipTM=0.393 tol=5.02
2024-12-05 05:29:58,779 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.6 pTM=0.433 ipTM=0.327 tol=5.07
2024-12-05 05:31:10,393 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.4 pTM=0.42 ipTM=0.324 tol=6.16
2024-12-05 05:32:22,027 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.5 pTM=0.419 ipTM=0.331 tol=4.02
2024-12-05 05:33:33,684 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.2 pTM=0.414 ipTM=0.317 tol=3.25
2024-12-05 05:34:45,362 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.4 pTM=0.41 ipTM=0.316 tol=2.34
2024-12-05 05:35:56,996 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.4 pTM=0.416 ipTM=0.333 tol=2.34
2024-12-05 05:37:08,615 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.2 pTM=0.412 ipTM=0.317 tol=4.07
2024-12-05 05:38:20,214 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.9 pTM=0.412 ipTM=0.309 tol=4.38
2024-12-05 05:39:31,797 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.4 pTM=0.406 ipTM=0.314 tol=2.33
2024-12-05 05:40:43,425 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67 pTM=0.405 ipTM=0.284 tol=4.1
2024-12-05 05:41:55,068 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.1 pTM=0.406 ipTM=0.301 tol=5.5
2024-12-05 05:43:06,891 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.3 pTM=0.416 ipTM=0.335 tol=2.78
2024-12-05 05:44:18,646 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.4 pTM=0.403 ipTM=0.288 tol=1.82
2024-12-05 05:45:30,478 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67.2 pTM=0.404 ipTM=0.296 tol=1.93
2024-12-05 05:46:42,295 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.4 pTM=0.405 ipTM=0.308 tol=1.74
2024-12-05 05:47:54,011 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.2 pTM=0.405 ipTM=0.297 tol=4.03
2024-12-05 05:49:05,747 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.8 pTM=0.4 ipTM=0.288 tol=6.22
2024-12-05 05:50:17,429 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.1 pTM=0.406 ipTM=0.303 tol=4.05
2024-12-05 05:51:29,081 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.3 pTM=0.407 ipTM=0.307 tol=3.95
2024-12-05 05:52:40,729 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.2 pTM=0.413 ipTM=0.322 tol=2.24
2024-12-05 05:53:52,372 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67.4 pTM=0.405 ipTM=0.299 tol=2.27
2024-12-05 05:55:04,048 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.1 pTM=0.397 ipTM=0.29 tol=2.19
2024-12-05 05:56:15,623 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.3 pTM=0.409 ipTM=0.309 tol=2.66
2024-12-05 05:57:27,163 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.2 pTM=0.413 ipTM=0.307 tol=2.06
2024-12-05 05:58:38,754 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.4 pTM=0.403 ipTM=0.318 tol=2.74
2024-12-05 05:59:50,390 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.2 pTM=0.412 ipTM=0.312 tol=3.51
2024-12-05 06:01:02,068 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67 pTM=0.422 ipTM=0.322 tol=2.69
2024-12-05 06:01:02,070 alphafold2_multimer_v3_model_4_seed_000 took 2221.7s (30 recycles)
2024-12-05 06:02:15,866 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.7 pTM=0.397 ipTM=0.244
2024-12-05 06:03:27,771 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.8 pTM=0.396 ipTM=0.262 tol=10
2024-12-05 06:04:39,843 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.8 pTM=0.377 ipTM=0.217 tol=17.5
2024-12-05 06:05:51,867 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.2 pTM=0.387 ipTM=0.229 tol=11.4
2024-12-05 06:07:03,665 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=64.4 pTM=0.401 ipTM=0.299 tol=19.8
2024-12-05 06:08:15,448 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.2 pTM=0.395 ipTM=0.273 tol=14.5
2024-12-05 06:09:27,083 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67 pTM=0.427 ipTM=0.296 tol=12.3
2024-12-05 06:10:38,708 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.4 pTM=0.406 ipTM=0.288 tol=6.76
2024-12-05 06:11:50,308 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.5 pTM=0.429 ipTM=0.321 tol=6.53
2024-12-05 06:13:01,898 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.5 pTM=0.417 ipTM=0.327 tol=4.36
2024-12-05 06:14:13,515 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.8 pTM=0.424 ipTM=0.306 tol=3.66
2024-12-05 06:15:25,117 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.6 pTM=0.429 ipTM=0.316 tol=5.01
2024-12-05 06:16:36,858 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.9 pTM=0.43 ipTM=0.313 tol=3.97
2024-12-05 06:17:48,578 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.9 pTM=0.444 ipTM=0.314 tol=3.91
2024-12-05 06:19:00,325 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.5 pTM=0.435 ipTM=0.31 tol=4.27
2024-12-05 06:20:12,108 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.8 pTM=0.432 ipTM=0.33 tol=2.26
2024-12-05 06:21:23,928 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67 pTM=0.442 ipTM=0.294 tol=1.74
2024-12-05 06:22:35,746 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.8 pTM=0.438 ipTM=0.305 tol=3.67
2024-12-05 06:23:47,600 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.8 pTM=0.436 ipTM=0.31 tol=3.95
2024-12-05 06:24:59,412 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.6 pTM=0.437 ipTM=0.292 tol=4.14
2024-12-05 06:26:11,222 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.6 pTM=0.43 ipTM=0.307 tol=3.96
2024-12-05 06:27:23,034 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.6 pTM=0.425 ipTM=0.279 tol=4.52
2024-12-05 06:28:34,839 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.8 pTM=0.425 ipTM=0.311 tol=2.32
2024-12-05 06:29:46,631 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.8 pTM=0.436 ipTM=0.288 tol=5.7
2024-12-05 06:30:58,396 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.6 pTM=0.423 ipTM=0.302 tol=2.85
2024-12-05 06:32:10,172 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.4 pTM=0.425 ipTM=0.294 tol=2.89
2024-12-05 06:33:21,936 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.8 pTM=0.431 ipTM=0.289 tol=4.85
2024-12-05 06:34:33,678 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.8 pTM=0.447 ipTM=0.325 tol=4.5
2024-12-05 06:35:45,419 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.8 pTM=0.43 ipTM=0.326 tol=2.15
2024-12-05 06:36:57,093 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.7 pTM=0.451 ipTM=0.329 tol=5.41
2024-12-05 06:38:08,754 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.5 pTM=0.426 ipTM=0.295 tol=4.1
2024-12-05 06:38:08,756 alphafold2_multimer_v3_model_5_seed_000 took 2224.8s (30 recycles)
2024-12-05 06:38:10,619 reranking models by 'multimer' metric
2024-12-05 06:38:14,356 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 06:42:19,144 Relaxation took 248.5s
2024-12-05 06:42:19,144 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.8 pTM=0.41 ipTM=0.344
2024-12-05 06:47:09,653 Relaxation took 290.5s
2024-12-05 06:47:09,653 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67 pTM=0.422 ipTM=0.322
2024-12-05 06:50:09,451 Relaxation took 179.8s
2024-12-05 06:50:09,451 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.5 pTM=0.415 ipTM=0.309
2024-12-05 06:53:08,188 Relaxation took 178.7s
2024-12-05 06:53:08,188 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.5 pTM=0.426 ipTM=0.295
2024-12-05 06:58:17,996 Relaxation took 309.8s
2024-12-05 06:58:17,996 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.1 pTM=0.379 ipTM=0.223
2024-12-05 06:58:22,140 Done