2024-12-05 03:22:48,122 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 03:22:48,440 Running on GPU
2024-12-05 03:22:51,048 Found 6 citations for tools or databases
2024-12-05 03:22:51,048 Query 1/1: BTRC_NUAK2 (length 1233)
2024-12-05 03:22:51,330 Sleeping for 8s. Reason: PENDING
2024-12-05 03:22:59,588 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:23:08,850 Sleeping for 10s. Reason: RUNNING
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2024-12-05 03:23:42,883 Sleeping for 10s. Reason: RUNNING
2024-12-05 03:23:53,142 Sleeping for 10s. Reason: RUNNING
2024-12-05 03:24:03,404 Sleeping for 7s. Reason: RUNNING
2024-12-05 03:24:10,668 Sleeping for 5s. Reason: RUNNING
2024-12-05 03:24:15,919 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:24:25,182 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:24:34,442 Sleeping for 5s. Reason: RUNNING
2024-12-05 03:24:39,697 Sleeping for 6s. Reason: RUNNING
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2024-12-05 03:24:51,206 Sleeping for 6s. Reason: RUNNING
2024-12-05 03:24:57,467 Sleeping for 7s. Reason: RUNNING
2024-12-05 03:25:04,723 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:25:13,988 Sleeping for 6s. Reason: RUNNING
2024-12-05 03:25:20,244 Sleeping for 7s. Reason: RUNNING
2024-12-05 03:25:27,502 Sleeping for 5s. Reason: RUNNING
2024-12-05 03:25:32,765 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:25:42,023 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:25:51,280 Sleeping for 10s. Reason: RUNNING
2024-12-05 03:26:01,537 Sleeping for 5s. Reason: RUNNING
2024-12-05 03:26:06,789 Sleeping for 5s. Reason: RUNNING
2024-12-05 03:26:12,046 Sleeping for 5s. Reason: RUNNING
2024-12-05 03:26:17,298 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:26:26,556 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:26:35,817 Sleeping for 6s. Reason: RUNNING
2024-12-05 03:26:42,074 Sleeping for 6s. Reason: RUNNING
2024-12-05 03:26:48,332 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:26:57,592 Sleeping for 7s. Reason: RUNNING
2024-12-05 03:27:04,849 Sleeping for 5s. Reason: RUNNING
2024-12-05 03:27:10,102 Sleeping for 8s. Reason: RUNNING
2024-12-05 03:27:20,709 Sleeping for 10s. Reason: PENDING
2024-12-05 03:27:30,971 Sleeping for 6s. Reason: RUNNING
2024-12-05 03:27:37,226 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:27:46,485 Sleeping for 6s. Reason: RUNNING
2024-12-05 03:27:52,740 Sleeping for 8s. Reason: RUNNING
2024-12-05 03:28:01,001 Sleeping for 7s. Reason: RUNNING
2024-12-05 03:28:08,257 Sleeping for 5s. Reason: RUNNING
2024-12-05 03:28:13,511 Sleeping for 10s. Reason: RUNNING
2024-12-05 03:28:23,774 Sleeping for 8s. Reason: RUNNING
2024-12-05 03:28:32,030 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:28:41,288 Sleeping for 7s. Reason: RUNNING
2024-12-05 03:28:48,548 Sleeping for 6s. Reason: RUNNING
2024-12-05 03:28:54,828 Sleeping for 8s. Reason: RUNNING
2024-12-05 03:29:03,087 Sleeping for 8s. Reason: RUNNING
2024-12-05 03:29:11,342 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:29:20,604 Sleeping for 6s. Reason: RUNNING
2024-12-05 03:29:26,861 Sleeping for 8s. Reason: RUNNING
2024-12-05 03:29:35,146 Sleeping for 8s. Reason: RUNNING
2024-12-05 03:29:43,412 Sleeping for 6s. Reason: RUNNING
2024-12-05 03:29:49,679 Sleeping for 8s. Reason: RUNNING
2024-12-05 03:29:57,935 Sleeping for 10s. Reason: RUNNING
2024-12-05 03:30:08,190 Sleeping for 9s. Reason: RUNNING
2024-12-05 03:30:17,448 Sleeping for 5s. Reason: RUNNING
2024-12-05 03:30:22,703 Sleeping for 10s. Reason: RUNNING
2024-12-05 03:30:38,870 Setting max_seq=508, max_extra_seq=2048
2024-12-05 03:34:03,521 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.3 pTM=0.421 ipTM=0.178
2024-12-05 03:34:41,918 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.3 pTM=0.424 ipTM=0.387 tol=20.6
2024-12-05 03:35:20,508 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.5 pTM=0.428 ipTM=0.37 tol=7.11
2024-12-05 03:35:59,250 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.6 pTM=0.429 ipTM=0.367 tol=6.39
2024-12-05 03:36:38,105 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.5 pTM=0.427 ipTM=0.366 tol=4.83
2024-12-05 03:37:17,021 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.7 pTM=0.431 ipTM=0.373 tol=3.99
2024-12-05 03:37:56,028 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.6 pTM=0.431 ipTM=0.377 tol=4.98
2024-12-05 03:38:35,044 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.7 pTM=0.429 ipTM=0.368 tol=5.12
2024-12-05 03:39:14,061 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.7 pTM=0.432 ipTM=0.365 tol=4.4
2024-12-05 03:39:53,034 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.8 pTM=0.431 ipTM=0.368 tol=3.8
2024-12-05 03:40:32,006 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.8 pTM=0.433 ipTM=0.363 tol=2.83
2024-12-05 03:41:10,964 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.7 pTM=0.433 ipTM=0.368 tol=4.04
2024-12-05 03:41:49,884 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.8 pTM=0.434 ipTM=0.366 tol=2.93
2024-12-05 03:42:28,803 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.9 pTM=0.438 ipTM=0.369 tol=2.8
2024-12-05 03:43:07,739 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.9 pTM=0.439 ipTM=0.371 tol=3.08
2024-12-05 03:43:46,627 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.9 pTM=0.437 ipTM=0.366 tol=4.7
2024-12-05 03:44:25,510 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.1 pTM=0.438 ipTM=0.371 tol=3.54
2024-12-05 03:45:04,410 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.9 pTM=0.437 ipTM=0.371 tol=2.4
2024-12-05 03:45:43,304 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.8 pTM=0.435 ipTM=0.375 tol=3.62
2024-12-05 03:46:22,197 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60 pTM=0.438 ipTM=0.365 tol=3.3
2024-12-05 03:47:01,112 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.8 pTM=0.436 ipTM=0.372 tol=3
2024-12-05 03:47:40,009 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.8 pTM=0.436 ipTM=0.366 tol=2.7
2024-12-05 03:48:18,880 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.6 pTM=0.433 ipTM=0.368 tol=2.04
2024-12-05 03:48:57,816 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.9 pTM=0.435 ipTM=0.368 tol=2.52
2024-12-05 03:49:36,765 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.9 pTM=0.436 ipTM=0.364 tol=2.51
2024-12-05 03:50:15,715 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.9 pTM=0.436 ipTM=0.367 tol=3.66
2024-12-05 03:50:54,675 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.9 pTM=0.438 ipTM=0.367 tol=1.66
2024-12-05 03:51:33,649 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.8 pTM=0.436 ipTM=0.365 tol=3.94
2024-12-05 03:52:12,613 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.9 pTM=0.438 ipTM=0.362 tol=3.03
2024-12-05 03:52:51,619 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.9 pTM=0.438 ipTM=0.37 tol=3.83
2024-12-05 03:53:30,582 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.8 pTM=0.436 ipTM=0.365 tol=3.21
2024-12-05 03:53:30,584 alphafold2_multimer_v3_model_1_seed_000 took 1366.6s (30 recycles)
2024-12-05 03:54:10,528 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.3 pTM=0.421 ipTM=0.183
2024-12-05 03:54:49,593 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.5 pTM=0.423 ipTM=0.189 tol=16.6
2024-12-05 03:55:28,722 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.6 pTM=0.438 ipTM=0.425 tol=15.8
2024-12-05 03:56:07,774 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.9 pTM=0.449 ipTM=0.33 tol=12.7
2024-12-05 03:56:46,785 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.9 pTM=0.446 ipTM=0.349 tol=5.74
2024-12-05 03:57:25,752 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.8 pTM=0.441 ipTM=0.349 tol=4.32
2024-12-05 03:58:04,734 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61 pTM=0.442 ipTM=0.351 tol=3.11
2024-12-05 03:58:43,715 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61 pTM=0.445 ipTM=0.346 tol=2.4
2024-12-05 03:59:22,678 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61 pTM=0.442 ipTM=0.343 tol=1.71
2024-12-05 04:00:01,631 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.9 pTM=0.437 ipTM=0.341 tol=3.92
2024-12-05 04:00:40,612 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61 pTM=0.439 ipTM=0.341 tol=2.53
2024-12-05 04:01:19,545 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61 pTM=0.444 ipTM=0.339 tol=3.04
2024-12-05 04:01:58,439 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.9 pTM=0.441 ipTM=0.344 tol=1.96
2024-12-05 04:02:37,367 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.1 pTM=0.442 ipTM=0.348 tol=2.14
2024-12-05 04:03:16,324 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.9 pTM=0.438 ipTM=0.346 tol=1.64
2024-12-05 04:03:55,311 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.9 pTM=0.441 ipTM=0.337 tol=1.55
2024-12-05 04:04:34,354 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.9 pTM=0.44 ipTM=0.349 tol=1.51
2024-12-05 04:05:13,446 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.9 pTM=0.441 ipTM=0.351 tol=2.29
2024-12-05 04:05:52,548 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.9 pTM=0.441 ipTM=0.355 tol=1.99
2024-12-05 04:06:31,650 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61 pTM=0.443 ipTM=0.349 tol=1.53
2024-12-05 04:07:10,717 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.8 pTM=0.437 ipTM=0.348 tol=2.76
2024-12-05 04:07:49,785 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.9 pTM=0.438 ipTM=0.347 tol=1.95
2024-12-05 04:08:28,847 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.9 pTM=0.437 ipTM=0.35 tol=2.16
2024-12-05 04:09:07,852 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.9 pTM=0.439 ipTM=0.345 tol=2.37
2024-12-05 04:09:46,897 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.9 pTM=0.439 ipTM=0.344 tol=1.66
2024-12-05 04:10:25,963 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61 pTM=0.44 ipTM=0.347 tol=1.3
2024-12-05 04:11:04,973 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.9 pTM=0.441 ipTM=0.345 tol=1.58
2024-12-05 04:11:44,009 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.9 pTM=0.439 ipTM=0.349 tol=1.63
2024-12-05 04:12:23,103 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.9 pTM=0.438 ipTM=0.345 tol=1.83
2024-12-05 04:13:02,234 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61 pTM=0.44 ipTM=0.349 tol=1.93
2024-12-05 04:13:41,289 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61 pTM=0.44 ipTM=0.345 tol=3.07
2024-12-05 04:13:41,290 alphafold2_multimer_v3_model_2_seed_000 took 1209.8s (30 recycles)
2024-12-05 04:14:21,358 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.2 pTM=0.422 ipTM=0.193
2024-12-05 04:15:00,491 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.8 pTM=0.437 ipTM=0.38 tol=18
2024-12-05 04:15:39,650 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.3 pTM=0.429 ipTM=0.3 tol=9.3
2024-12-05 04:16:18,760 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60 pTM=0.44 ipTM=0.337 tol=11.1
2024-12-05 04:16:57,852 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.6 pTM=0.432 ipTM=0.321 tol=7.9
2024-12-05 04:17:36,912 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.6 pTM=0.433 ipTM=0.327 tol=5.88
2024-12-05 04:18:15,969 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.7 pTM=0.435 ipTM=0.333 tol=8.41
2024-12-05 04:18:55,041 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.8 pTM=0.437 ipTM=0.329 tol=5.16
2024-12-05 04:19:34,092 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.5 pTM=0.432 ipTM=0.321 tol=3.94
2024-12-05 04:20:13,109 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.6 pTM=0.434 ipTM=0.323 tol=4
2024-12-05 04:20:52,142 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.6 pTM=0.432 ipTM=0.369 tol=5.68
2024-12-05 04:21:31,163 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.7 pTM=0.432 ipTM=0.327 tol=4.2
2024-12-05 04:22:10,134 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.6 pTM=0.434 ipTM=0.321 tol=5
2024-12-05 04:22:49,091 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.5 pTM=0.431 ipTM=0.315 tol=6.6
2024-12-05 04:23:28,035 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.7 pTM=0.432 ipTM=0.35 tol=3.13
2024-12-05 04:24:06,934 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.7 pTM=0.436 ipTM=0.314 tol=8.04
2024-12-05 04:24:45,850 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.6 pTM=0.433 ipTM=0.32 tol=4.11
2024-12-05 04:25:24,856 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.6 pTM=0.431 ipTM=0.323 tol=4.25
2024-12-05 04:26:03,902 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.4 pTM=0.429 ipTM=0.317 tol=4.25
2024-12-05 04:26:42,955 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.6 pTM=0.434 ipTM=0.322 tol=4.9
2024-12-05 04:27:22,038 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.4 pTM=0.43 ipTM=0.33 tol=4.03
2024-12-05 04:28:01,162 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=59.4 pTM=0.43 ipTM=0.313 tol=2.91
2024-12-05 04:28:40,314 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.3 pTM=0.428 ipTM=0.316 tol=2.85
2024-12-05 04:29:19,434 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.3 pTM=0.43 ipTM=0.318 tol=2.14
2024-12-05 04:29:58,545 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.4 pTM=0.429 ipTM=0.319 tol=2.48
2024-12-05 04:30:37,603 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.7 pTM=0.435 ipTM=0.322 tol=6.76
2024-12-05 04:31:16,680 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.3 pTM=0.429 ipTM=0.308 tol=4.75
2024-12-05 04:31:55,750 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59.5 pTM=0.431 ipTM=0.323 tol=3.58
2024-12-05 04:32:34,814 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.5 pTM=0.431 ipTM=0.35 tol=2.3
2024-12-05 04:33:13,917 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.4 pTM=0.433 ipTM=0.322 tol=2.43
2024-12-05 04:33:53,010 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.4 pTM=0.431 ipTM=0.317 tol=2.32
2024-12-05 04:33:53,011 alphafold2_multimer_v3_model_3_seed_000 took 1210.8s (30 recycles)
2024-12-05 04:34:32,902 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.3 pTM=0.426 ipTM=0.199
2024-12-05 04:35:11,894 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.3 pTM=0.447 ipTM=0.428 tol=18.9
2024-12-05 04:35:50,840 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.3 pTM=0.451 ipTM=0.368 tol=11.3
2024-12-05 04:36:29,818 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.2 pTM=0.452 ipTM=0.431 tol=9.25
2024-12-05 04:37:08,781 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.1 pTM=0.453 ipTM=0.382 tol=5.69
2024-12-05 04:37:47,735 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.2 pTM=0.453 ipTM=0.354 tol=7.82
2024-12-05 04:38:26,722 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.1 pTM=0.451 ipTM=0.355 tol=5.71
2024-12-05 04:39:05,733 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60 pTM=0.451 ipTM=0.358 tol=5.13
2024-12-05 04:39:44,720 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.1 pTM=0.45 ipTM=0.343 tol=3.13
2024-12-05 04:40:23,712 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.8 pTM=0.448 ipTM=0.354 tol=6.25
2024-12-05 04:41:02,685 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.9 pTM=0.448 ipTM=0.344 tol=4.89
2024-12-05 04:41:41,660 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.7 pTM=0.442 ipTM=0.352 tol=4.05
2024-12-05 04:42:20,615 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.7 pTM=0.443 ipTM=0.349 tol=5.4
2024-12-05 04:42:59,568 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.8 pTM=0.446 ipTM=0.346 tol=4.42
2024-12-05 04:43:38,539 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.8 pTM=0.444 ipTM=0.344 tol=5.55
2024-12-05 04:44:17,467 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.9 pTM=0.45 ipTM=0.343 tol=4.61
2024-12-05 04:44:56,415 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.7 pTM=0.445 ipTM=0.336 tol=5.14
2024-12-05 04:45:35,420 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.8 pTM=0.446 ipTM=0.353 tol=6.26
2024-12-05 04:46:14,402 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.8 pTM=0.447 ipTM=0.339 tol=2.83
2024-12-05 04:46:53,431 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.9 pTM=0.445 ipTM=0.342 tol=3.02
2024-12-05 04:47:32,475 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.5 pTM=0.443 ipTM=0.345 tol=2.8
2024-12-05 04:48:11,518 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.7 pTM=0.446 ipTM=0.337 tol=5.56
2024-12-05 04:48:50,564 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.5 pTM=0.443 ipTM=0.333 tol=5.12
2024-12-05 04:49:29,617 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.4 pTM=0.441 ipTM=0.34 tol=5.09
2024-12-05 04:50:08,619 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.8 pTM=0.449 ipTM=0.345 tol=4.55
2024-12-05 04:50:47,612 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.8 pTM=0.448 ipTM=0.338 tol=4.16
2024-12-05 04:51:26,632 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.6 pTM=0.449 ipTM=0.335 tol=3.12
2024-12-05 04:52:05,643 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.7 pTM=0.447 ipTM=0.335 tol=5.05
2024-12-05 04:52:44,623 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.5 pTM=0.445 ipTM=0.334 tol=1.92
2024-12-05 04:53:23,539 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.7 pTM=0.449 ipTM=0.339 tol=1.81
2024-12-05 04:54:02,424 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.6 pTM=0.446 ipTM=0.339 tol=2.37
2024-12-05 04:54:02,425 alphafold2_multimer_v3_model_4_seed_000 took 1208.5s (30 recycles)
2024-12-05 04:54:42,234 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.5 pTM=0.423 ipTM=0.219
2024-12-05 04:55:21,136 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.2 pTM=0.449 ipTM=0.392 tol=12.3
2024-12-05 04:56:00,059 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.8 pTM=0.447 ipTM=0.437 tol=11.9
2024-12-05 04:56:39,010 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.2 pTM=0.448 ipTM=0.364 tol=7.49
2024-12-05 04:57:17,944 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.1 pTM=0.447 ipTM=0.328 tol=6.45
2024-12-05 04:57:56,949 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.1 pTM=0.438 ipTM=0.328 tol=4.59
2024-12-05 04:58:35,947 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.2 pTM=0.44 ipTM=0.329 tol=3.69
2024-12-05 04:59:14,934 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.3 pTM=0.443 ipTM=0.335 tol=4.72
2024-12-05 04:59:53,927 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60.1 pTM=0.439 ipTM=0.326 tol=4.88
2024-12-05 05:00:32,925 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.2 pTM=0.44 ipTM=0.333 tol=4.12
2024-12-05 05:01:11,899 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.2 pTM=0.441 ipTM=0.324 tol=3.66
2024-12-05 05:01:50,848 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60.2 pTM=0.442 ipTM=0.33 tol=2.67
2024-12-05 05:02:29,794 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.1 pTM=0.438 ipTM=0.327 tol=4.12
2024-12-05 05:03:08,747 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.3 pTM=0.44 ipTM=0.331 tol=6.11
2024-12-05 05:03:47,694 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60.2 pTM=0.439 ipTM=0.327 tol=4.39
2024-12-05 05:04:26,652 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.2 pTM=0.44 ipTM=0.321 tol=3.14
2024-12-05 05:05:05,604 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.2 pTM=0.442 ipTM=0.328 tol=4.62
2024-12-05 05:05:44,609 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.2 pTM=0.437 ipTM=0.333 tol=2.09
2024-12-05 05:06:23,650 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60.2 pTM=0.438 ipTM=0.33 tol=2.46
2024-12-05 05:07:02,706 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60.2 pTM=0.438 ipTM=0.322 tol=2.05
2024-12-05 05:07:41,798 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.1 pTM=0.435 ipTM=0.333 tol=2.07
2024-12-05 05:08:20,877 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.1 pTM=0.439 ipTM=0.318 tol=2.19
2024-12-05 05:08:59,960 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.1 pTM=0.438 ipTM=0.327 tol=3.15
2024-12-05 05:09:39,044 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.9 pTM=0.435 ipTM=0.323 tol=2.17
2024-12-05 05:10:18,120 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=60.2 pTM=0.441 ipTM=0.325 tol=4.91
2024-12-05 05:10:57,218 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60.2 pTM=0.442 ipTM=0.323 tol=5.16
2024-12-05 05:11:36,265 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.2 pTM=0.442 ipTM=0.315 tol=4.3
2024-12-05 05:12:15,342 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.2 pTM=0.438 ipTM=0.333 tol=3.7
2024-12-05 05:12:54,408 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=60.2 pTM=0.437 ipTM=0.325 tol=3.89
2024-12-05 05:13:33,437 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60.2 pTM=0.441 ipTM=0.329 tol=2.62
2024-12-05 05:14:12,453 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=60.2 pTM=0.441 ipTM=0.323 tol=4.75
2024-12-05 05:14:12,455 alphafold2_multimer_v3_model_5_seed_000 took 1209.1s (30 recycles)
2024-12-05 05:14:13,368 reranking models by 'multimer' metric
2024-12-05 05:14:15,858 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 05:27:28,652 Relaxation took 795.3s
2024-12-05 05:27:28,652 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.8 pTM=0.436 ipTM=0.365
2024-12-05 05:30:17,398 Relaxation took 168.7s
2024-12-05 05:30:17,399 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61 pTM=0.44 ipTM=0.345
2024-12-05 05:32:25,406 Relaxation took 128.0s
2024-12-05 05:32:25,406 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.6 pTM=0.446 ipTM=0.339
2024-12-05 05:34:07,221 Relaxation took 101.8s
2024-12-05 05:34:07,221 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=60.2 pTM=0.441 ipTM=0.323
2024-12-05 05:36:14,654 Relaxation took 127.4s
2024-12-05 05:36:14,654 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.4 pTM=0.431 ipTM=0.317
2024-12-05 05:36:17,159 Done