2024-12-05 03:55:55,823 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-05 03:55:56,193 Running on GPU 2024-12-05 03:56:00,062 Found 6 citations for tools or databases 2024-12-05 03:56:00,062 Query 1/1: BTRC_TUBGCP4 (length 1272) 2024-12-05 03:56:00,365 Sleeping for 5s. Reason: PENDING 2024-12-05 03:56:05,619 Sleeping for 10s. Reason: RUNNING 2024-12-05 03:56:15,893 Sleeping for 6s. Reason: RUNNING 2024-12-05 03:56:22,179 Sleeping for 9s. Reason: RUNNING 2024-12-05 03:56:31,452 Sleeping for 7s. Reason: RUNNING 2024-12-05 03:56:38,706 Sleeping for 7s. Reason: RUNNING 2024-12-05 03:56:45,962 Sleeping for 7s. Reason: RUNNING 2024-12-05 03:56:53,228 Sleeping for 5s. Reason: RUNNING 2024-12-05 03:56:58,483 Sleeping for 9s. Reason: RUNNING 2024-12-05 03:57:07,749 Sleeping for 6s. Reason: RUNNING 2024-12-05 03:57:13,999 Sleeping for 8s. Reason: RUNNING 2024-12-05 03:57:22,261 Sleeping for 10s. Reason: RUNNING 2024-12-05 03:57:32,523 Sleeping for 8s. Reason: RUNNING 2024-12-05 03:57:40,777 Sleeping for 8s. Reason: RUNNING 2024-12-05 03:57:49,036 Sleeping for 8s. Reason: RUNNING 2024-12-05 03:57:57,293 Sleeping for 5s. Reason: RUNNING 2024-12-05 03:58:02,544 Sleeping for 5s. Reason: RUNNING 2024-12-05 03:58:07,808 Sleeping for 9s. Reason: RUNNING 2024-12-05 03:58:18,595 Sleeping for 5s. Reason: PENDING 2024-12-05 03:58:23,848 Sleeping for 9s. Reason: RUNNING 2024-12-05 03:58:33,105 Sleeping for 8s. Reason: RUNNING 2024-12-05 03:58:41,365 Sleeping for 7s. Reason: RUNNING 2024-12-05 03:58:48,628 Sleeping for 7s. Reason: RUNNING 2024-12-05 03:58:55,883 Sleeping for 8s. Reason: RUNNING 2024-12-05 03:59:04,143 Sleeping for 10s. Reason: RUNNING 2024-12-05 03:59:14,412 Sleeping for 9s. Reason: RUNNING 2024-12-05 03:59:23,678 Sleeping for 7s. Reason: RUNNING 2024-12-05 03:59:30,952 Sleeping for 7s. Reason: RUNNING 2024-12-05 03:59:38,222 Sleeping for 10s. Reason: RUNNING 2024-12-05 03:59:52,263 Setting max_seq=508, max_extra_seq=2048 2024-12-05 04:02:54,830 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.3 pTM=0.521 ipTM=0.288 2024-12-05 04:03:32,319 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.2 pTM=0.475 ipTM=0.21 tol=7.15 2024-12-05 04:04:09,905 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.5 pTM=0.476 ipTM=0.219 tol=3.9 2024-12-05 04:04:47,564 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73 pTM=0.469 ipTM=0.205 tol=4.02 2024-12-05 04:05:25,254 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73.1 pTM=0.474 ipTM=0.215 tol=2.83 2024-12-05 04:06:02,969 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.1 pTM=0.476 ipTM=0.218 tol=4.1 2024-12-05 04:06:40,693 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.8 pTM=0.469 ipTM=0.211 tol=3.74 2024-12-05 04:07:18,435 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.1 pTM=0.47 ipTM=0.214 tol=2.42 2024-12-05 04:07:56,170 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.2 pTM=0.474 ipTM=0.217 tol=3.73 2024-12-05 04:08:33,892 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.1 pTM=0.476 ipTM=0.225 tol=4.3 2024-12-05 04:09:11,620 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.3 pTM=0.477 ipTM=0.228 tol=3.03 2024-12-05 04:09:49,353 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.1 pTM=0.469 ipTM=0.212 tol=3.15 2024-12-05 04:10:27,081 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.2 pTM=0.475 ipTM=0.222 tol=2.23 2024-12-05 04:11:04,812 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.1 pTM=0.469 ipTM=0.217 tol=1.54 2024-12-05 04:11:42,576 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.4 pTM=0.476 ipTM=0.222 tol=1.43 2024-12-05 04:12:20,335 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.1 pTM=0.473 ipTM=0.222 tol=3.73 2024-12-05 04:12:58,085 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.1 pTM=0.474 ipTM=0.22 tol=3.19 2024-12-05 04:13:35,850 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.1 pTM=0.476 ipTM=0.223 tol=1.62 2024-12-05 04:14:13,600 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.9 pTM=0.472 ipTM=0.224 tol=3.5 2024-12-05 04:14:51,349 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.2 pTM=0.478 ipTM=0.229 tol=3.92 2024-12-05 04:15:29,071 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.2 pTM=0.475 ipTM=0.228 tol=1.79 2024-12-05 04:16:06,809 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.2 pTM=0.47 ipTM=0.223 tol=1.5 2024-12-05 04:16:44,560 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.1 pTM=0.468 ipTM=0.215 tol=2.04 2024-12-05 04:17:22,312 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.1 pTM=0.48 ipTM=0.236 tol=2.66 2024-12-05 04:18:00,084 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.5 pTM=0.475 ipTM=0.222 tol=2.11 2024-12-05 04:18:37,850 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.2 pTM=0.471 ipTM=0.223 tol=1.38 2024-12-05 04:19:15,626 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.3 pTM=0.473 ipTM=0.223 tol=3.72 2024-12-05 04:19:53,398 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.1 pTM=0.468 ipTM=0.214 tol=2.34 2024-12-05 04:20:31,166 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.2 pTM=0.478 ipTM=0.233 tol=2.64 2024-12-05 04:21:08,936 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.1 pTM=0.468 ipTM=0.213 tol=1.26 2024-12-05 04:21:46,736 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.1 pTM=0.469 ipTM=0.216 tol=1.06 2024-12-05 04:21:46,737 alphafold2_multimer_v3_model_1_seed_000 took 1307.8s (30 recycles) 2024-12-05 04:22:25,795 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=73.5 pTM=0.491 ipTM=0.214 2024-12-05 04:23:03,695 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.2 pTM=0.478 ipTM=0.2 tol=4.88 2024-12-05 04:23:41,592 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.6 pTM=0.47 ipTM=0.189 tol=2.26 2024-12-05 04:24:19,536 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.6 pTM=0.47 ipTM=0.188 tol=2.06 2024-12-05 04:24:57,489 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.8 pTM=0.479 ipTM=0.205 tol=2.31 2024-12-05 04:25:35,439 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.8 pTM=0.472 ipTM=0.196 tol=2.5 2024-12-05 04:26:13,395 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.6 pTM=0.469 ipTM=0.194 tol=2.38 2024-12-05 04:26:51,375 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75 pTM=0.468 ipTM=0.183 tol=1.11 2024-12-05 04:27:29,317 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.9 pTM=0.471 ipTM=0.19 tol=1.87 2024-12-05 04:28:07,275 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.9 pTM=0.467 ipTM=0.19 tol=2.61 2024-12-05 04:28:45,227 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.1 pTM=0.469 ipTM=0.195 tol=3.13 2024-12-05 04:29:23,158 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.9 pTM=0.467 ipTM=0.193 tol=2.62 2024-12-05 04:30:01,073 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.9 pTM=0.475 ipTM=0.2 tol=2.79 2024-12-05 04:30:39,003 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.9 pTM=0.469 ipTM=0.194 tol=2.11 2024-12-05 04:31:16,937 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.9 pTM=0.471 ipTM=0.194 tol=3.23 2024-12-05 04:31:54,844 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.8 pTM=0.467 ipTM=0.191 tol=1.38 2024-12-05 04:32:32,738 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.8 pTM=0.469 ipTM=0.192 tol=2.51 2024-12-05 04:33:10,643 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75 pTM=0.468 ipTM=0.19 tol=1.2 2024-12-05 04:33:48,560 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.5 pTM=0.467 ipTM=0.195 tol=2.32 2024-12-05 04:34:26,505 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.9 pTM=0.474 ipTM=0.2 tol=2.29 2024-12-05 04:35:04,427 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75 pTM=0.468 ipTM=0.191 tol=2.52 2024-12-05 04:35:42,381 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.1 pTM=0.468 ipTM=0.189 tol=2.78 2024-12-05 04:36:20,313 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.9 pTM=0.462 ipTM=0.178 tol=2.8 2024-12-05 04:36:58,258 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75 pTM=0.463 ipTM=0.18 tol=2.68 2024-12-05 04:37:36,208 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.1 pTM=0.464 ipTM=0.179 tol=1.14 2024-12-05 04:38:14,144 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.9 pTM=0.464 ipTM=0.184 tol=1.59 2024-12-05 04:38:52,102 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75 pTM=0.466 ipTM=0.182 tol=1.86 2024-12-05 04:39:30,075 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75 pTM=0.471 ipTM=0.192 tol=2.78 2024-12-05 04:40:08,039 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75 pTM=0.468 ipTM=0.188 tol=2.43 2024-12-05 04:40:46,015 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.9 pTM=0.469 ipTM=0.189 tol=2.6 2024-12-05 04:41:23,988 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.8 pTM=0.467 ipTM=0.19 tol=1.38 2024-12-05 04:41:23,989 alphafold2_multimer_v3_model_2_seed_000 took 1176.0s (30 recycles) 2024-12-05 04:42:03,139 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.8 pTM=0.497 ipTM=0.215 2024-12-05 04:42:41,094 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.1 pTM=0.477 ipTM=0.189 tol=5.75 2024-12-05 04:43:19,000 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.1 pTM=0.476 ipTM=0.196 tol=5.06 2024-12-05 04:43:56,921 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.1 pTM=0.47 ipTM=0.189 tol=3 2024-12-05 04:44:34,856 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.6 pTM=0.474 ipTM=0.189 tol=2.41 2024-12-05 04:45:12,794 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74 pTM=0.463 ipTM=0.186 tol=3.25 2024-12-05 04:45:50,694 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74.4 pTM=0.468 ipTM=0.185 tol=2.76 2024-12-05 04:46:28,627 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.4 pTM=0.464 ipTM=0.178 tol=2.55 2024-12-05 04:47:06,529 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74.6 pTM=0.464 ipTM=0.177 tol=3.46 2024-12-05 04:47:44,412 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=74.2 pTM=0.459 ipTM=0.176 tol=6.98 2024-12-05 04:48:22,279 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.6 pTM=0.464 ipTM=0.182 tol=5.66 2024-12-05 04:49:00,083 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=74.1 pTM=0.461 ipTM=0.198 tol=2.82 2024-12-05 04:49:37,931 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.4 pTM=0.47 ipTM=0.187 tol=3.6 2024-12-05 04:50:15,807 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=74.4 pTM=0.47 ipTM=0.191 tol=1.82 2024-12-05 04:50:53,666 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.6 pTM=0.475 ipTM=0.193 tol=1.73 2024-12-05 04:51:31,527 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.3 pTM=0.465 ipTM=0.186 tol=3.62 2024-12-05 04:52:09,408 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.5 pTM=0.466 ipTM=0.181 tol=3.51 2024-12-05 04:52:47,286 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.4 pTM=0.462 ipTM=0.175 tol=3 2024-12-05 04:53:25,188 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.6 pTM=0.467 ipTM=0.182 tol=2.11 2024-12-05 04:54:03,109 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.5 pTM=0.468 ipTM=0.184 tol=2.52 2024-12-05 04:54:40,999 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.7 pTM=0.472 ipTM=0.196 tol=3.71 2024-12-05 04:55:18,908 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.3 pTM=0.466 ipTM=0.186 tol=3.79 2024-12-05 04:55:56,819 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=74.6 pTM=0.468 ipTM=0.182 tol=4.21 2024-12-05 04:56:34,760 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74.6 pTM=0.46 ipTM=0.176 tol=3.93 2024-12-05 04:57:12,689 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.9 pTM=0.468 ipTM=0.185 tol=4.66 2024-12-05 04:57:50,641 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=74.6 pTM=0.46 ipTM=0.176 tol=3.78 2024-12-05 04:58:28,646 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.8 pTM=0.457 ipTM=0.165 tol=2.51 2024-12-05 04:59:06,660 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=74.7 pTM=0.453 ipTM=0.156 tol=2.39 2024-12-05 04:59:44,649 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.4 pTM=0.448 ipTM=0.157 tol=4.01 2024-12-05 05:00:22,626 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74.4 pTM=0.451 ipTM=0.159 tol=4.62 2024-12-05 05:01:00,645 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.5 pTM=0.449 ipTM=0.156 tol=3.65 2024-12-05 05:01:00,647 alphafold2_multimer_v3_model_3_seed_000 took 1175.4s (30 recycles) 2024-12-05 05:01:39,768 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=73.8 pTM=0.5 ipTM=0.221 2024-12-05 05:02:17,674 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74 pTM=0.479 ipTM=0.188 tol=4.91 2024-12-05 05:02:55,611 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=74 pTM=0.463 ipTM=0.168 tol=3.6 2024-12-05 05:03:33,581 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=74.2 pTM=0.461 ipTM=0.16 tol=3.68 2024-12-05 05:04:11,526 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=74.4 pTM=0.461 ipTM=0.158 tol=3.09 2024-12-05 05:04:49,474 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=74.1 pTM=0.453 ipTM=0.149 tol=3.62 2024-12-05 05:05:27,419 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.9 pTM=0.446 ipTM=0.149 tol=6.6 2024-12-05 05:06:05,326 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=74 pTM=0.451 ipTM=0.192 tol=10.8 2024-12-05 05:06:43,185 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.8 pTM=0.458 ipTM=0.178 tol=3.19 2024-12-05 05:07:21,040 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=74.1 pTM=0.459 ipTM=0.207 tol=1.81 2024-12-05 05:07:58,917 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.9 pTM=0.459 ipTM=0.217 tol=3.36 2024-12-05 05:08:36,757 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.8 pTM=0.461 ipTM=0.224 tol=7.39 2024-12-05 05:09:14,579 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=73.9 pTM=0.464 ipTM=0.202 tol=3.16 2024-12-05 05:09:52,392 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=73.9 pTM=0.465 ipTM=0.213 tol=2.2 2024-12-05 05:10:30,233 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.1 pTM=0.469 ipTM=0.182 tol=2.31 2024-12-05 05:11:08,063 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=74.1 pTM=0.465 ipTM=0.177 tol=1.26 2024-12-05 05:11:45,887 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=73.8 pTM=0.466 ipTM=0.229 tol=1.45 2024-12-05 05:12:23,751 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.9 pTM=0.466 ipTM=0.204 tol=1.48 2024-12-05 05:13:01,647 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=73.9 pTM=0.465 ipTM=0.202 tol=2.29 2024-12-05 05:13:39,544 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=74.1 pTM=0.468 ipTM=0.173 tol=1.62 2024-12-05 05:14:17,448 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74 pTM=0.464 ipTM=0.187 tol=2 2024-12-05 05:14:55,345 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73.8 pTM=0.464 ipTM=0.21 tol=2.63 2024-12-05 05:15:33,287 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=73.9 pTM=0.464 ipTM=0.198 tol=1.62 2024-12-05 05:16:11,189 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=73.8 pTM=0.464 ipTM=0.188 tol=1.39 2024-12-05 05:16:49,073 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=73.8 pTM=0.464 ipTM=0.202 tol=1.54 2024-12-05 05:17:26,980 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=73.7 pTM=0.461 ipTM=0.188 tol=2.52 2024-12-05 05:18:04,897 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74.1 pTM=0.467 ipTM=0.225 tol=2.02 2024-12-05 05:18:42,796 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74 pTM=0.469 ipTM=0.231 tol=1.22 2024-12-05 05:19:20,693 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=73.9 pTM=0.467 ipTM=0.2 tol=1.16 2024-12-05 05:19:58,561 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=73.8 pTM=0.466 ipTM=0.19 tol=1.6 2024-12-05 05:20:36,431 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=73.6 pTM=0.462 ipTM=0.22 tol=0.999 2024-12-05 05:20:36,432 alphafold2_multimer_v3_model_4_seed_000 took 1174.5s (30 recycles) 2024-12-05 05:21:15,519 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=73.6 pTM=0.549 ipTM=0.297 2024-12-05 05:21:53,409 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.8 pTM=0.512 ipTM=0.246 tol=6.76 2024-12-05 05:22:31,299 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.6 pTM=0.495 ipTM=0.219 tol=3.02 2024-12-05 05:23:09,203 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.8 pTM=0.495 ipTM=0.212 tol=3 2024-12-05 05:23:47,099 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=74.2 pTM=0.497 ipTM=0.21 tol=2.11 2024-12-05 05:24:24,981 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.9 pTM=0.499 ipTM=0.219 tol=2.88 2024-12-05 05:25:02,844 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=74 pTM=0.493 ipTM=0.214 tol=4.59 2024-12-05 05:25:40,746 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.9 pTM=0.494 ipTM=0.215 tol=2.83 2024-12-05 05:26:18,616 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.1 pTM=0.493 ipTM=0.208 tol=2.94 2024-12-05 05:26:56,475 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.1 pTM=0.492 ipTM=0.209 tol=4.37 2024-12-05 05:27:34,371 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.1 pTM=0.489 ipTM=0.201 tol=2.85 2024-12-05 05:28:12,257 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.1 pTM=0.489 ipTM=0.205 tol=1.85 2024-12-05 05:28:50,141 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74 pTM=0.492 ipTM=0.208 tol=3.64 2024-12-05 05:29:28,009 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.1 pTM=0.491 ipTM=0.209 tol=3.17 2024-12-05 05:30:05,900 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.9 pTM=0.494 ipTM=0.21 tol=3.84 2024-12-05 05:30:43,788 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.8 pTM=0.49 ipTM=0.211 tol=2.19 2024-12-05 05:31:21,657 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.8 pTM=0.492 ipTM=0.21 tol=2.22 2024-12-05 05:31:59,542 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.9 pTM=0.49 ipTM=0.207 tol=1.48 2024-12-05 05:32:37,454 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.8 pTM=0.493 ipTM=0.213 tol=2.3 2024-12-05 05:33:15,378 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.1 pTM=0.495 ipTM=0.213 tol=2.95 2024-12-05 05:33:53,277 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.1 pTM=0.496 ipTM=0.22 tol=2.56 2024-12-05 05:34:31,185 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.9 pTM=0.494 ipTM=0.219 tol=3.38 2024-12-05 05:35:09,082 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=73.9 pTM=0.497 ipTM=0.216 tol=2.71 2024-12-05 05:35:46,969 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.1 pTM=0.492 ipTM=0.212 tol=3.28 2024-12-05 05:36:24,876 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74 pTM=0.497 ipTM=0.221 tol=1.68 2024-12-05 05:37:02,742 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74 pTM=0.494 ipTM=0.217 tol=3.42 2024-12-05 05:37:40,601 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.1 pTM=0.496 ipTM=0.221 tol=3.82 2024-12-05 05:38:18,461 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=73.9 pTM=0.496 ipTM=0.219 tol=2.77 2024-12-05 05:38:56,324 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=73.9 pTM=0.497 ipTM=0.217 tol=2.7 2024-12-05 05:39:34,192 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.9 pTM=0.494 ipTM=0.214 tol=1.75 2024-12-05 05:40:12,039 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.9 pTM=0.492 ipTM=0.209 tol=2.32 2024-12-05 05:40:12,040 alphafold2_multimer_v3_model_5_seed_000 took 1174.4s (30 recycles) 2024-12-05 05:40:13,269 reranking models by 'multimer' metric 2024-12-05 05:40:17,424 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-05 05:43:47,066 Relaxation took 213.8s 2024-12-05 05:43:47,066 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=73.6 pTM=0.462 ipTM=0.22 2024-12-05 05:47:17,232 Relaxation took 210.2s 2024-12-05 05:47:17,233 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.1 pTM=0.469 ipTM=0.216 2024-12-05 05:49:03,431 Relaxation took 106.2s 2024-12-05 05:49:03,431 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.9 pTM=0.492 ipTM=0.209 2024-12-05 05:51:51,366 Relaxation took 167.9s 2024-12-05 05:51:51,366 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.8 pTM=0.467 ipTM=0.19 2024-12-05 05:54:59,435 Relaxation took 188.1s 2024-12-05 05:54:59,435 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.5 pTM=0.449 ipTM=0.156 2024-12-05 05:55:02,314 Done