2024-12-05 04:09:25,081 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 04:09:25,385 Running on GPU
2024-12-05 04:09:29,100 Found 6 citations for tools or databases
2024-12-05 04:09:29,100 Query 1/1: BTRC_USP47 (length 1980)
2024-12-05 04:09:29,388 Sleeping for 7s. Reason: PENDING
2024-12-05 04:09:36,643 Sleeping for 9s. Reason: RUNNING
2024-12-05 04:09:45,903 Sleeping for 9s. Reason: RUNNING
2024-12-05 04:09:55,522 Sleeping for 6s. Reason: RUNNING
2024-12-05 04:10:01,781 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:10:10,035 Sleeping for 6s. Reason: RUNNING
2024-12-05 04:10:16,296 Sleeping for 6s. Reason: RUNNING
2024-12-05 04:10:22,553 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:10:27,822 Sleeping for 9s. Reason: RUNNING
2024-12-05 04:10:37,082 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:10:45,342 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:10:53,643 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:11:01,900 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:11:10,164 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:11:15,424 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:11:20,682 Sleeping for 9s. Reason: RUNNING
2024-12-05 04:11:29,946 Sleeping for 7s. Reason: RUNNING
2024-12-05 04:11:37,208 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:11:42,467 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:11:47,725 Sleeping for 6s. Reason: RUNNING
2024-12-05 04:11:53,981 Sleeping for 9s. Reason: RUNNING
2024-12-05 04:12:03,242 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:12:08,497 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:12:13,754 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:12:19,010 Sleeping for 6s. Reason: RUNNING
2024-12-05 04:12:25,264 Sleeping for 6s. Reason: RUNNING
2024-12-05 04:12:31,521 Sleeping for 7s. Reason: RUNNING
2024-12-05 04:12:38,779 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:12:47,033 Sleeping for 6s. Reason: RUNNING
2024-12-05 04:12:53,285 Sleeping for 7s. Reason: RUNNING
2024-12-05 04:13:00,546 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:13:08,808 Sleeping for 10s. Reason: RUNNING
2024-12-05 04:13:19,074 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:13:27,338 Sleeping for 10s. Reason: RUNNING
2024-12-05 04:13:37,597 Sleeping for 7s. Reason: RUNNING
2024-12-05 04:13:46,407 Sleeping for 6s. Reason: PENDING
2024-12-05 04:13:52,662 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:14:00,924 Sleeping for 9s. Reason: RUNNING
2024-12-05 04:14:10,190 Sleeping for 10s. Reason: RUNNING
2024-12-05 04:14:20,456 Sleeping for 10s. Reason: RUNNING
2024-12-05 04:14:30,722 Sleeping for 7s. Reason: RUNNING
2024-12-05 04:14:37,988 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:14:43,242 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:14:51,503 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:14:56,762 Sleeping for 10s. Reason: RUNNING
2024-12-05 04:15:07,023 Sleeping for 9s. Reason: RUNNING
2024-12-05 04:15:16,291 Sleeping for 7s. Reason: RUNNING
2024-12-05 04:15:23,551 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:15:28,808 Sleeping for 9s. Reason: RUNNING
2024-12-05 04:15:38,063 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:15:43,323 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:15:48,578 Sleeping for 10s. Reason: RUNNING
2024-12-05 04:15:58,845 Sleeping for 6s. Reason: RUNNING
2024-12-05 04:16:05,098 Sleeping for 10s. Reason: RUNNING
2024-12-05 04:16:15,358 Sleeping for 7s. Reason: RUNNING
2024-12-05 04:16:22,617 Sleeping for 10s. Reason: RUNNING
2024-12-05 04:16:32,878 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:16:41,133 Sleeping for 8s. Reason: RUNNING
2024-12-05 04:16:49,387 Sleeping for 5s. Reason: RUNNING
2024-12-05 04:17:01,987 Setting max_seq=508, max_extra_seq=2048
2024-12-05 04:21:52,849 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.6 pTM=0.372 ipTM=0.256
2024-12-05 04:24:24,797 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.9 pTM=0.36 ipTM=0.266 tol=6.24
2024-12-05 04:26:57,045 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64 pTM=0.348 ipTM=0.257 tol=5.73
2024-12-05 04:29:29,433 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.1 pTM=0.35 ipTM=0.254 tol=3.51
2024-12-05 04:32:01,744 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.3 pTM=0.349 ipTM=0.251 tol=3.17
2024-12-05 04:34:34,071 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.4 pTM=0.351 ipTM=0.254 tol=2.53
2024-12-05 04:37:06,282 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.4 pTM=0.349 ipTM=0.251 tol=1.91
2024-12-05 04:39:38,525 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.6 pTM=0.35 ipTM=0.252 tol=1.89
2024-12-05 04:42:10,752 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.6 pTM=0.348 ipTM=0.249 tol=2.94
2024-12-05 04:44:42,926 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.4 pTM=0.347 ipTM=0.252 tol=2.69
2024-12-05 04:47:15,218 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.4 pTM=0.347 ipTM=0.255 tol=2.21
2024-12-05 04:49:47,522 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.3 pTM=0.347 ipTM=0.25 tol=1.54
2024-12-05 04:52:19,830 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.4 pTM=0.347 ipTM=0.251 tol=1.34
2024-12-05 04:54:51,947 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.2 pTM=0.347 ipTM=0.253 tol=1.47
2024-12-05 04:57:24,097 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.6 pTM=0.349 ipTM=0.27 tol=3.11
2024-12-05 04:59:56,245 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.8 pTM=0.359 ipTM=0.292 tol=3.26
2024-12-05 05:02:28,394 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.7 pTM=0.361 ipTM=0.314 tol=2.23
2024-12-05 05:05:00,521 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.9 pTM=0.365 ipTM=0.315 tol=1.57
2024-12-05 05:07:32,749 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.7 pTM=0.362 ipTM=0.314 tol=3.18
2024-12-05 05:10:05,031 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.1 pTM=0.364 ipTM=0.31 tol=2.38
2024-12-05 05:12:37,271 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.2 pTM=0.365 ipTM=0.317 tol=10.8
2024-12-05 05:15:09,537 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.6 pTM=0.363 ipTM=0.307 tol=7.84
2024-12-05 05:17:41,760 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.3 pTM=0.364 ipTM=0.316 tol=4.54
2024-12-05 05:20:13,995 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.6 pTM=0.365 ipTM=0.314 tol=3.3
2024-12-05 05:22:46,261 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.5 pTM=0.363 ipTM=0.308 tol=2.05
2024-12-05 05:25:18,436 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.6 pTM=0.374 ipTM=0.337 tol=1.47
2024-12-05 05:27:50,634 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.9 pTM=0.37 ipTM=0.333 tol=2.97
2024-12-05 05:30:22,859 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.8 pTM=0.371 ipTM=0.331 tol=4.8
2024-12-05 05:32:55,107 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.7 pTM=0.369 ipTM=0.329 tol=3.64
2024-12-05 05:35:27,339 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.9 pTM=0.371 ipTM=0.332 tol=3.15
2024-12-05 05:37:59,594 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65 pTM=0.368 ipTM=0.326 tol=2.7
2024-12-05 05:37:59,596 alphafold2_multimer_v3_model_1_seed_000 took 4852.5s (30 recycles)
2024-12-05 05:40:34,317 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.3 pTM=0.418 ipTM=0.265
2024-12-05 05:43:06,837 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.9 pTM=0.407 ipTM=0.251 tol=7.25
2024-12-05 05:45:39,214 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.9 pTM=0.399 ipTM=0.25 tol=5.26
2024-12-05 05:48:11,594 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67 pTM=0.397 ipTM=0.27 tol=2.57
2024-12-05 05:50:43,960 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.2 pTM=0.399 ipTM=0.299 tol=2.59
2024-12-05 05:53:16,298 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.4 pTM=0.407 ipTM=0.363 tol=2.08
2024-12-05 05:55:48,481 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.6 pTM=0.402 ipTM=0.332 tol=1.76
2024-12-05 05:58:20,836 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.5 pTM=0.401 ipTM=0.299 tol=1.56
2024-12-05 06:00:53,251 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.5 pTM=0.397 ipTM=0.298 tol=2.15
2024-12-05 06:03:25,632 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.5 pTM=0.398 ipTM=0.278 tol=1.64
2024-12-05 06:05:58,087 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.5 pTM=0.398 ipTM=0.258 tol=2.39
2024-12-05 06:08:30,544 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.5 pTM=0.399 ipTM=0.255 tol=2.49
2024-12-05 06:11:02,981 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.4 pTM=0.398 ipTM=0.26 tol=2.49
2024-12-05 06:13:35,333 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.4 pTM=0.397 ipTM=0.272 tol=1.36
2024-12-05 06:16:07,804 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.4 pTM=0.397 ipTM=0.265 tol=1.63
2024-12-05 06:18:40,118 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.4 pTM=0.398 ipTM=0.255 tol=3.16
2024-12-05 06:21:12,565 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.4 pTM=0.397 ipTM=0.246 tol=3.58
2024-12-05 06:23:45,063 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.4 pTM=0.401 ipTM=0.246 tol=2.54
2024-12-05 06:26:17,466 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.4 pTM=0.404 ipTM=0.245 tol=2.36
2024-12-05 06:28:49,831 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.6 pTM=0.405 ipTM=0.246 tol=2.96
2024-12-05 06:31:22,202 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.4 pTM=0.402 ipTM=0.245 tol=1.45
2024-12-05 06:33:54,577 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.3 pTM=0.403 ipTM=0.245 tol=1.32
2024-12-05 06:36:26,961 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.2 pTM=0.399 ipTM=0.25 tol=1.9
2024-12-05 06:38:59,396 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.1 pTM=0.401 ipTM=0.247 tol=1.87
2024-12-05 06:41:31,802 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.1 pTM=0.401 ipTM=0.247 tol=1.75
2024-12-05 06:44:04,151 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.1 pTM=0.4 ipTM=0.247 tol=1.96
2024-12-05 06:46:36,540 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.2 pTM=0.399 ipTM=0.245 tol=1.8
2024-12-05 06:49:08,895 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.2 pTM=0.401 ipTM=0.245 tol=2.05
2024-12-05 06:51:41,175 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.2 pTM=0.402 ipTM=0.247 tol=1.88
2024-12-05 06:54:13,510 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.3 pTM=0.404 ipTM=0.247 tol=1.74
2024-12-05 06:56:45,998 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.3 pTM=0.402 ipTM=0.245 tol=1.28
2024-12-05 06:56:46,000 alphafold2_multimer_v3_model_2_seed_000 took 4724.1s (30 recycles)
2024-12-05 06:59:20,861 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.6 pTM=0.378 ipTM=0.251
2024-12-05 07:01:53,308 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.5 pTM=0.392 ipTM=0.313 tol=8.61
2024-12-05 07:04:25,879 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.9 pTM=0.392 ipTM=0.278 tol=7.58
2024-12-05 07:06:58,430 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.1 pTM=0.392 ipTM=0.241 tol=9.09
2024-12-05 07:09:30,782 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.5 pTM=0.392 ipTM=0.359 tol=4.32
2024-12-05 07:12:03,125 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.2 pTM=0.391 ipTM=0.365 tol=17.9
2024-12-05 07:14:35,297 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.6 pTM=0.421 ipTM=0.379 tol=7.97
2024-12-05 07:17:07,480 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.1 pTM=0.443 ipTM=0.432 tol=5.44
2024-12-05 07:19:39,707 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.1 pTM=0.448 ipTM=0.448 tol=4.78
2024-12-05 07:22:11,937 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.1 pTM=0.449 ipTM=0.452 tol=4.22
2024-12-05 07:24:44,108 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.2 pTM=0.453 ipTM=0.451 tol=3.59
2024-12-05 07:27:16,220 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.1 pTM=0.445 ipTM=0.446 tol=3.24
2024-12-05 07:29:48,251 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.9 pTM=0.445 ipTM=0.444 tol=3.52
2024-12-05 07:32:20,173 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.1 pTM=0.451 ipTM=0.452 tol=2.58
2024-12-05 07:34:52,198 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67 pTM=0.451 ipTM=0.459 tol=1.92
2024-12-05 07:37:24,249 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.2 pTM=0.463 ipTM=0.483 tol=1.68
2024-12-05 07:39:56,285 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.4 pTM=0.467 ipTM=0.494 tol=1.07
2024-12-05 07:42:28,376 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.5 pTM=0.472 ipTM=0.497 tol=1.56
2024-12-05 07:45:00,522 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.4 pTM=0.476 ipTM=0.507 tol=1.56
2024-12-05 07:47:32,656 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.6 pTM=0.484 ipTM=0.525 tol=1.09
2024-12-05 07:50:04,787 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.6 pTM=0.481 ipTM=0.516 tol=1.43
2024-12-05 07:52:36,949 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.5 pTM=0.479 ipTM=0.512 tol=0.97
2024-12-05 07:55:09,040 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.6 pTM=0.484 ipTM=0.519 tol=0.987
2024-12-05 07:57:41,132 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.7 pTM=0.485 ipTM=0.522 tol=1.05
2024-12-05 08:00:13,138 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.5 pTM=0.486 ipTM=0.531 tol=1.86
2024-12-05 08:02:45,195 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.6 pTM=0.484 ipTM=0.523 tol=1.26
2024-12-05 08:05:17,274 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.8 pTM=0.484 ipTM=0.53 tol=1.8
2024-12-05 08:07:49,373 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.8 pTM=0.491 ipTM=0.538 tol=2.06
2024-12-05 08:10:21,473 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.7 pTM=0.495 ipTM=0.541 tol=1.12
2024-12-05 08:12:53,577 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.8 pTM=0.495 ipTM=0.542 tol=1.32
2024-12-05 08:15:25,742 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.9 pTM=0.493 ipTM=0.537 tol=1.26
2024-12-05 08:15:25,744 alphafold2_multimer_v3_model_3_seed_000 took 4717.5s (30 recycles)
2024-12-05 08:18:00,514 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.8 pTM=0.364 ipTM=0.295
2024-12-05 08:20:33,091 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.8 pTM=0.357 ipTM=0.359 tol=10.6
2024-12-05 08:23:05,823 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.8 pTM=0.363 ipTM=0.357 tol=5.8
2024-12-05 08:25:38,405 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.2 pTM=0.362 ipTM=0.329 tol=8.7
2024-12-05 08:28:10,896 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.8 pTM=0.385 ipTM=0.329 tol=7.63
2024-12-05 08:30:43,281 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.1 pTM=0.413 ipTM=0.387 tol=4.51
2024-12-05 08:33:15,723 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.1 pTM=0.42 ipTM=0.407 tol=5.05
2024-12-05 08:35:48,122 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.3 pTM=0.424 ipTM=0.424 tol=5.32
2024-12-05 08:38:20,428 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.1 pTM=0.428 ipTM=0.434 tol=2.89
2024-12-05 08:40:52,828 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.3 pTM=0.425 ipTM=0.421 tol=2.29
2024-12-05 08:43:25,296 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.1 pTM=0.423 ipTM=0.424 tol=3.24
2024-12-05 08:45:57,725 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.1 pTM=0.423 ipTM=0.424 tol=4.41
2024-12-05 08:48:30,105 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.9 pTM=0.424 ipTM=0.413 tol=2.43
2024-12-05 08:51:02,577 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.9 pTM=0.42 ipTM=0.41 tol=2.96
2024-12-05 08:53:34,962 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.1 pTM=0.425 ipTM=0.425 tol=4.89
2024-12-05 08:56:07,349 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66 pTM=0.419 ipTM=0.412 tol=2.79
2024-12-05 08:58:39,682 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.9 pTM=0.423 ipTM=0.424 tol=1.32
2024-12-05 09:01:12,023 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.9 pTM=0.415 ipTM=0.41 tol=1.25
2024-12-05 09:03:44,327 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.9 pTM=0.418 ipTM=0.418 tol=1.08
2024-12-05 09:06:16,559 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.3 pTM=0.433 ipTM=0.442 tol=3.04
2024-12-05 09:08:48,792 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.9 pTM=0.425 ipTM=0.422 tol=3.54
2024-12-05 09:11:21,051 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.8 pTM=0.428 ipTM=0.43 tol=3.22
2024-12-05 09:13:53,456 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.8 pTM=0.423 ipTM=0.421 tol=1.84
2024-12-05 09:16:25,811 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.7 pTM=0.422 ipTM=0.422 tol=3.67
2024-12-05 09:18:58,094 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.8 pTM=0.424 ipTM=0.427 tol=2.4
2024-12-05 09:21:30,334 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.9 pTM=0.425 ipTM=0.425 tol=2.55
2024-12-05 09:24:02,624 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.9 pTM=0.417 ipTM=0.412 tol=1.54
2024-12-05 09:26:34,951 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.9 pTM=0.412 ipTM=0.403 tol=1.56
2024-12-05 09:29:07,249 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.9 pTM=0.418 ipTM=0.414 tol=1.33
2024-12-05 09:31:39,613 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.9 pTM=0.415 ipTM=0.408 tol=1.04
2024-12-05 09:34:12,029 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.8 pTM=0.422 ipTM=0.415 tol=3.11
2024-12-05 09:34:12,031 alphafold2_multimer_v3_model_4_seed_000 took 4724.0s (30 recycles)
2024-12-05 09:36:46,744 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.1 pTM=0.388 ipTM=0.296
2024-12-05 09:39:19,284 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.2 pTM=0.373 ipTM=0.26 tol=8.37
2024-12-05 09:41:51,845 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.9 pTM=0.373 ipTM=0.254 tol=6.76
2024-12-05 09:44:24,182 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.1 pTM=0.421 ipTM=0.373 tol=8.86
2024-12-05 09:46:56,412 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.3 pTM=0.46 ipTM=0.489 tol=5.67
2024-12-05 09:49:28,544 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.6 pTM=0.491 ipTM=0.543 tol=3.85
2024-12-05 09:52:00,715 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.7 pTM=0.494 ipTM=0.56 tol=3.35
2024-12-05 09:54:32,862 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.6 pTM=0.505 ipTM=0.576 tol=1.82
2024-12-05 09:57:04,959 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.9 pTM=0.51 ipTM=0.587 tol=1.7
2024-12-05 09:59:37,060 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67 pTM=0.521 ipTM=0.591 tol=1.89
2024-12-05 10:02:09,285 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.1 pTM=0.519 ipTM=0.589 tol=1.77
2024-12-05 10:04:41,520 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.1 pTM=0.528 ipTM=0.602 tol=3.41
2024-12-05 10:07:13,745 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67 pTM=0.521 ipTM=0.601 tol=3.15
2024-12-05 10:09:46,003 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.1 pTM=0.52 ipTM=0.595 tol=2.73
2024-12-05 10:12:18,241 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67 pTM=0.523 ipTM=0.601 tol=2.87
2024-12-05 10:14:50,414 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.1 pTM=0.524 ipTM=0.601 tol=2.8
2024-12-05 10:17:22,503 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67 pTM=0.522 ipTM=0.601 tol=3
2024-12-05 10:19:54,650 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.1 pTM=0.523 ipTM=0.601 tol=1.56
2024-12-05 10:22:26,830 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67 pTM=0.528 ipTM=0.607 tol=1.57
2024-12-05 10:24:59,011 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.3 pTM=0.534 ipTM=0.616 tol=1.61
2024-12-05 10:27:31,225 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.3 pTM=0.532 ipTM=0.61 tol=3
2024-12-05 10:30:03,383 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.2 pTM=0.529 ipTM=0.607 tol=2.96
2024-12-05 10:32:35,603 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.2 pTM=0.529 ipTM=0.608 tol=1.58
2024-12-05 10:35:07,772 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.1 pTM=0.528 ipTM=0.604 tol=1.8
2024-12-05 10:37:39,859 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.1 pTM=0.533 ipTM=0.614 tol=1.96
2024-12-05 10:40:11,995 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67 pTM=0.526 ipTM=0.605 tol=2.15
2024-12-05 10:42:44,174 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.1 pTM=0.525 ipTM=0.599 tol=1.64
2024-12-05 10:45:16,303 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.9 pTM=0.523 ipTM=0.597 tol=1.53
2024-12-05 10:47:48,454 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.1 pTM=0.526 ipTM=0.597 tol=3.49
2024-12-05 10:50:20,621 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.1 pTM=0.523 ipTM=0.598 tol=3.03
2024-12-05 10:52:52,780 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.2 pTM=0.528 ipTM=0.6 tol=1.59
2024-12-05 10:52:52,782 alphafold2_multimer_v3_model_5_seed_000 took 4718.5s (30 recycles)
2024-12-05 10:52:55,056 reranking models by 'multimer' metric
2024-12-05 10:52:57,003 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 10:57:16,454 Relaxation took 261.4s
2024-12-05 10:57:16,454 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.2 pTM=0.528 ipTM=0.6
2024-12-05 11:02:02,300 Relaxation took 285.8s
2024-12-05 11:02:02,300 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.9 pTM=0.493 ipTM=0.537
2024-12-05 11:07:39,895 Relaxation took 337.6s
2024-12-05 11:07:39,895 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.8 pTM=0.422 ipTM=0.415
2024-12-05 11:13:04,939 Relaxation took 325.0s
2024-12-05 11:13:04,939 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65 pTM=0.368 ipTM=0.326
2024-12-05 11:16:28,001 Relaxation took 203.1s
2024-12-05 11:16:28,001 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.3 pTM=0.402 ipTM=0.245
2024-12-05 11:16:33,445 Done