2024-12-11 13:24:12,969 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-11 13:24:14,685 Running on GPU
2024-12-11 13:24:18,904 Found 6 citations for tools or databases
2024-12-11 13:24:18,904 Query 1/1: BUB1B_ANAPC5 (length 1805)
2024-12-11 13:24:19,418 Sleeping for 10s. Reason: PENDING
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2024-12-11 13:27:34,706 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:27:42,964 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:27:51,224 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:28:01,487 Sleeping for 8s. Reason: RUNNING
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2024-12-11 13:28:18,012 Sleeping for 8s. Reason: RUNNING
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2024-12-11 13:28:36,525 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:28:43,612 Sleeping for 7s. Reason: PENDING
2024-12-11 13:28:50,872 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:28:56,133 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:29:05,388 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:29:11,647 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:29:21,902 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:29:31,156 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:29:39,415 Sleeping for 7s. Reason: RUNNING
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2024-12-11 13:30:22,725 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:30:29,986 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:30:39,245 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:30:44,508 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:30:52,769 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:31:03,825 Setting max_seq=508, max_extra_seq=2048
2024-12-11 13:36:31,966 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.2 pTM=0.447 ipTM=0.356
2024-12-11 13:38:10,470 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.8 pTM=0.463 ipTM=0.28 tol=12.8
2024-12-11 13:39:49,188 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.7 pTM=0.456 ipTM=0.295 tol=20.5
2024-12-11 13:41:27,818 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61 pTM=0.457 ipTM=0.31 tol=7.83
2024-12-11 13:43:06,437 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61 pTM=0.46 ipTM=0.296 tol=9.65
2024-12-11 13:44:45,010 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.1 pTM=0.462 ipTM=0.276 tol=8.47
2024-12-11 13:46:23,635 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.8 pTM=0.464 ipTM=0.357 tol=9.78
2024-12-11 13:48:02,302 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.5 pTM=0.465 ipTM=0.36 tol=9.52
2024-12-11 13:49:41,000 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.2 pTM=0.464 ipTM=0.443 tol=6.61
2024-12-11 13:51:19,636 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.2 pTM=0.466 ipTM=0.476 tol=7.91
2024-12-11 13:52:58,269 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.3 pTM=0.469 ipTM=0.496 tol=5.6
2024-12-11 13:54:36,765 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.3 pTM=0.47 ipTM=0.5 tol=4.4
2024-12-11 13:56:15,281 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.7 pTM=0.467 ipTM=0.516 tol=5.37
2024-12-11 13:57:53,728 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.6 pTM=0.468 ipTM=0.509 tol=4.6
2024-12-11 13:59:32,132 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.5 pTM=0.471 ipTM=0.529 tol=5.71
2024-12-11 14:01:10,499 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.8 pTM=0.472 ipTM=0.501 tol=3.19
2024-12-11 14:02:48,878 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.6 pTM=0.474 ipTM=0.511 tol=3.91
2024-12-11 14:04:27,267 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.5 pTM=0.473 ipTM=0.483 tol=4.55
2024-12-11 14:06:05,741 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.7 pTM=0.472 ipTM=0.523 tol=2.57
2024-12-11 14:07:44,286 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.6 pTM=0.475 ipTM=0.493 tol=3.28
2024-12-11 14:09:22,826 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.5 pTM=0.472 ipTM=0.513 tol=2.58
2024-12-11 14:11:01,226 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.5 pTM=0.474 ipTM=0.483 tol=2.63
2024-12-11 14:12:39,565 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.3 pTM=0.474 ipTM=0.526 tol=4.63
2024-12-11 14:14:17,910 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.6 pTM=0.473 ipTM=0.494 tol=4.02
2024-12-11 14:15:56,254 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.7 pTM=0.474 ipTM=0.496 tol=3.26
2024-12-11 14:17:34,608 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.8 pTM=0.475 ipTM=0.489 tol=3.94
2024-12-11 14:19:12,955 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.8 pTM=0.478 ipTM=0.516 tol=4.02
2024-12-11 14:20:51,356 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63 pTM=0.483 ipTM=0.526 tol=4.57
2024-12-11 14:22:29,771 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.8 pTM=0.479 ipTM=0.512 tol=2.57
2024-12-11 14:24:08,231 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.8 pTM=0.478 ipTM=0.483 tol=4.02
2024-12-11 14:25:46,704 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.8 pTM=0.481 ipTM=0.511 tol=3.52
2024-12-11 14:25:46,706 alphafold2_multimer_v3_model_1_seed_000 took 3277.3s (30 recycles)
2024-12-11 14:27:27,807 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.8 pTM=0.467 ipTM=0.389
2024-12-11 14:29:06,693 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.1 pTM=0.452 ipTM=0.287 tol=11
2024-12-11 14:30:45,597 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61 pTM=0.446 ipTM=0.288 tol=23.5
2024-12-11 14:32:24,472 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.9 pTM=0.445 ipTM=0.27 tol=14
2024-12-11 14:34:03,331 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.2 pTM=0.445 ipTM=0.289 tol=7.91
2024-12-11 14:35:42,194 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.2 pTM=0.445 ipTM=0.302 tol=7.24
2024-12-11 14:37:20,975 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.2 pTM=0.444 ipTM=0.28 tol=4.78
2024-12-11 14:38:59,720 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62 pTM=0.442 ipTM=0.259 tol=5.84
2024-12-11 14:40:38,432 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.3 pTM=0.439 ipTM=0.257 tol=3.8
2024-12-11 14:42:17,113 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.5 pTM=0.434 ipTM=0.255 tol=21.3
2024-12-11 14:43:55,796 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.5 pTM=0.436 ipTM=0.231 tol=7.15
2024-12-11 14:45:34,509 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.3 pTM=0.437 ipTM=0.244 tol=5.73
2024-12-11 14:47:13,200 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.4 pTM=0.44 ipTM=0.246 tol=4.28
2024-12-11 14:48:51,822 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.8 pTM=0.439 ipTM=0.302 tol=10.5
2024-12-11 14:50:30,482 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.5 pTM=0.439 ipTM=0.268 tol=6.89
2024-12-11 14:52:09,266 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.8 pTM=0.434 ipTM=0.226 tol=9.71
2024-12-11 14:53:48,057 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.2 pTM=0.436 ipTM=0.2 tol=9.25
2024-12-11 14:55:26,877 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.2 pTM=0.433 ipTM=0.187 tol=6.02
2024-12-11 14:57:05,762 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.2 pTM=0.433 ipTM=0.188 tol=5.98
2024-12-11 14:58:44,663 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.5 pTM=0.434 ipTM=0.182 tol=6.62
2024-12-11 15:00:23,557 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.4 pTM=0.434 ipTM=0.183 tol=5.27
2024-12-11 15:02:02,402 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.5 pTM=0.436 ipTM=0.196 tol=8.59
2024-12-11 15:03:41,310 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.7 pTM=0.435 ipTM=0.191 tol=5.36
2024-12-11 15:05:20,193 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.7 pTM=0.437 ipTM=0.184 tol=3.86
2024-12-11 15:06:58,996 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.5 pTM=0.433 ipTM=0.184 tol=4.12
2024-12-11 15:08:37,700 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.6 pTM=0.433 ipTM=0.182 tol=3.88
2024-12-11 15:10:16,394 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.9 pTM=0.434 ipTM=0.182 tol=5.6
2024-12-11 15:11:55,128 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.8 pTM=0.436 ipTM=0.184 tol=6.02
2024-12-11 15:13:33,840 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.8 pTM=0.435 ipTM=0.19 tol=6.3
2024-12-11 15:15:12,513 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62 pTM=0.433 ipTM=0.186 tol=4.83
2024-12-11 15:16:51,178 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.9 pTM=0.433 ipTM=0.19 tol=3.77
2024-12-11 15:16:51,180 alphafold2_multimer_v3_model_2_seed_000 took 3062.1s (30 recycles)
2024-12-11 15:18:32,361 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.3 pTM=0.442 ipTM=0.372
2024-12-11 15:20:10,895 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.9 pTM=0.46 ipTM=0.339 tol=27
2024-12-11 15:21:49,578 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.7 pTM=0.45 ipTM=0.305 tol=16.1
2024-12-11 15:23:28,291 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.3 pTM=0.455 ipTM=0.311 tol=6.59
2024-12-11 15:25:06,965 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.7 pTM=0.46 ipTM=0.342 tol=4.85
2024-12-11 15:26:45,671 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.7 pTM=0.457 ipTM=0.228 tol=3.58
2024-12-11 15:28:24,395 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.5 pTM=0.459 ipTM=0.25 tol=4.47
2024-12-11 15:30:03,176 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.7 pTM=0.456 ipTM=0.232 tol=3.95
2024-12-11 15:31:42,020 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.6 pTM=0.455 ipTM=0.248 tol=3.74
2024-12-11 15:33:20,850 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.8 pTM=0.457 ipTM=0.276 tol=4.37
2024-12-11 15:34:59,684 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.7 pTM=0.457 ipTM=0.35 tol=6.54
2024-12-11 15:36:38,544 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.6 pTM=0.455 ipTM=0.278 tol=5.33
2024-12-11 15:38:17,459 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.7 pTM=0.458 ipTM=0.297 tol=4.72
2024-12-11 15:39:56,297 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.9 pTM=0.457 ipTM=0.235 tol=4.11
2024-12-11 15:41:35,097 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.3 pTM=0.456 ipTM=0.276 tol=4.38
2024-12-11 15:43:13,943 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.4 pTM=0.45 ipTM=0.231 tol=6.82
2024-12-11 15:44:52,777 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.4 pTM=0.448 ipTM=0.262 tol=21.5
2024-12-11 15:46:31,470 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.6 pTM=0.455 ipTM=0.303 tol=13
2024-12-11 15:48:10,097 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.8 pTM=0.458 ipTM=0.337 tol=6.3
2024-12-11 15:49:48,719 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.1 pTM=0.464 ipTM=0.38 tol=5.09
2024-12-11 15:51:27,293 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.2 pTM=0.47 ipTM=0.413 tol=4.71
2024-12-11 15:53:05,866 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.4 pTM=0.474 ipTM=0.432 tol=3.87
2024-12-11 15:54:44,454 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.4 pTM=0.476 ipTM=0.454 tol=3.04
2024-12-11 15:56:23,085 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.6 pTM=0.477 ipTM=0.46 tol=3.41
2024-12-11 15:58:01,757 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.6 pTM=0.475 ipTM=0.461 tol=2.42
2024-12-11 15:59:40,457 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.5 pTM=0.474 ipTM=0.443 tol=2.86
2024-12-11 16:01:19,194 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.7 pTM=0.477 ipTM=0.456 tol=2.89
2024-12-11 16:02:57,896 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.8 pTM=0.479 ipTM=0.458 tol=2.72
2024-12-11 16:04:36,593 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.8 pTM=0.478 ipTM=0.457 tol=2.97
2024-12-11 16:06:15,346 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.7 pTM=0.475 ipTM=0.438 tol=3.54
2024-12-11 16:07:54,066 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.6 pTM=0.473 ipTM=0.439 tol=1.89
2024-12-11 16:07:54,068 alphafold2_multimer_v3_model_3_seed_000 took 3060.5s (30 recycles)
2024-12-11 16:09:35,301 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.7 pTM=0.444 ipTM=0.387
2024-12-11 16:11:14,248 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.8 pTM=0.432 ipTM=0.219 tol=23.5
2024-12-11 16:12:53,154 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.3 pTM=0.436 ipTM=0.258 tol=13.2
2024-12-11 16:14:32,102 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.7 pTM=0.444 ipTM=0.281 tol=22.1
2024-12-11 16:16:10,819 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.8 pTM=0.453 ipTM=0.304 tol=9.3
2024-12-11 16:17:49,530 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.8 pTM=0.455 ipTM=0.319 tol=9.19
2024-12-11 16:19:28,230 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.9 pTM=0.462 ipTM=0.339 tol=8.99
2024-12-11 16:21:06,964 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.5 pTM=0.475 ipTM=0.384 tol=9.1
2024-12-11 16:22:45,615 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.8 pTM=0.482 ipTM=0.381 tol=6.02
2024-12-11 16:24:24,196 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.9 pTM=0.48 ipTM=0.38 tol=4.99
2024-12-11 16:26:02,721 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.8 pTM=0.483 ipTM=0.388 tol=7.42
2024-12-11 16:27:41,258 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.8 pTM=0.482 ipTM=0.387 tol=8.35
2024-12-11 16:29:19,766 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62 pTM=0.488 ipTM=0.393 tol=7.89
2024-12-11 16:30:58,341 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.9 pTM=0.487 ipTM=0.4 tol=7.09
2024-12-11 16:32:36,962 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.6 pTM=0.484 ipTM=0.39 tol=6.38
2024-12-11 16:34:15,612 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.9 pTM=0.488 ipTM=0.396 tol=5.77
2024-12-11 16:35:54,379 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.8 pTM=0.486 ipTM=0.401 tol=4.91
2024-12-11 16:37:33,079 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.6 pTM=0.484 ipTM=0.386 tol=8.34
2024-12-11 16:39:11,774 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.6 pTM=0.481 ipTM=0.353 tol=7.64
2024-12-11 16:40:50,445 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61.8 pTM=0.481 ipTM=0.373 tol=5.21
2024-12-11 16:42:29,180 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.6 pTM=0.478 ipTM=0.362 tol=5.57
2024-12-11 16:44:07,890 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.7 pTM=0.48 ipTM=0.361 tol=6.95
2024-12-11 16:45:46,664 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.5 pTM=0.472 ipTM=0.345 tol=6.15
2024-12-11 16:47:25,429 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61.2 pTM=0.471 ipTM=0.348 tol=11
2024-12-11 16:49:04,147 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.6 pTM=0.47 ipTM=0.348 tol=6.63
2024-12-11 16:50:42,875 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.6 pTM=0.473 ipTM=0.355 tol=4.74
2024-12-11 16:52:21,556 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61.8 pTM=0.474 ipTM=0.347 tol=4.9
2024-12-11 16:54:00,312 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.7 pTM=0.475 ipTM=0.35 tol=8.62
2024-12-11 16:55:39,002 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.6 pTM=0.475 ipTM=0.363 tol=12.9
2024-12-11 16:57:17,700 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61.7 pTM=0.475 ipTM=0.346 tol=9.17
2024-12-11 16:58:56,383 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.6 pTM=0.476 ipTM=0.344 tol=11.4
2024-12-11 16:58:56,385 alphafold2_multimer_v3_model_4_seed_000 took 3059.9s (30 recycles)
2024-12-11 17:00:37,511 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.8 pTM=0.445 ipTM=0.26
2024-12-11 17:02:16,218 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.7 pTM=0.439 ipTM=0.276 tol=14.6
2024-12-11 17:03:54,958 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.8 pTM=0.433 ipTM=0.228 tol=18.7
2024-12-11 17:05:33,683 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.7 pTM=0.435 ipTM=0.261 tol=9.38
2024-12-11 17:07:12,349 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.1 pTM=0.44 ipTM=0.268 tol=9.48
2024-12-11 17:08:51,066 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.2 pTM=0.439 ipTM=0.248 tol=6.68
2024-12-11 17:10:29,714 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.6 pTM=0.453 ipTM=0.333 tol=4.62
2024-12-11 17:12:08,352 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62 pTM=0.448 ipTM=0.27 tol=3.36
2024-12-11 17:13:46,978 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.9 pTM=0.445 ipTM=0.232 tol=3.24
2024-12-11 17:15:25,685 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.9 pTM=0.442 ipTM=0.217 tol=2.91
2024-12-11 17:17:04,339 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.9 pTM=0.446 ipTM=0.227 tol=5.43
2024-12-11 17:18:42,932 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.9 pTM=0.453 ipTM=0.273 tol=5
2024-12-11 17:20:21,546 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.1 pTM=0.453 ipTM=0.252 tol=2.17
2024-12-11 17:22:00,202 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62 pTM=0.45 ipTM=0.218 tol=3.06
2024-12-11 17:23:38,937 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.7 pTM=0.442 ipTM=0.197 tol=3.39
2024-12-11 17:25:17,774 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.9 pTM=0.442 ipTM=0.178 tol=7.62
2024-12-11 17:26:56,434 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61 pTM=0.45 ipTM=0.227 tol=25
2024-12-11 17:28:35,182 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.7 pTM=0.446 ipTM=0.178 tol=6.5
2024-12-11 17:30:13,969 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.6 pTM=0.443 ipTM=0.177 tol=6.5
2024-12-11 17:31:52,721 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.7 pTM=0.444 ipTM=0.175 tol=5.98
2024-12-11 17:33:31,405 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.7 pTM=0.445 ipTM=0.176 tol=6.02
2024-12-11 17:35:10,070 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.7 pTM=0.446 ipTM=0.177 tol=5.99
2024-12-11 17:36:48,752 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.6 pTM=0.445 ipTM=0.177 tol=5.3
2024-12-11 17:38:27,464 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.6 pTM=0.447 ipTM=0.178 tol=4.52
2024-12-11 17:40:06,188 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.7 pTM=0.447 ipTM=0.177 tol=7.11
2024-12-11 17:41:44,918 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.4 pTM=0.446 ipTM=0.18 tol=7.39
2024-12-11 17:43:23,689 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.5 pTM=0.446 ipTM=0.18 tol=6.79
2024-12-11 17:45:02,481 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.6 pTM=0.448 ipTM=0.176 tol=6.26
2024-12-11 17:46:41,262 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.5 pTM=0.447 ipTM=0.175 tol=5.72
2024-12-11 17:48:20,073 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.4 pTM=0.445 ipTM=0.178 tol=4.72
2024-12-11 17:49:58,924 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.3 pTM=0.444 ipTM=0.175 tol=5.94
2024-12-11 17:49:58,926 alphafold2_multimer_v3_model_5_seed_000 took 3060.1s (30 recycles)
2024-12-11 17:50:01,342 reranking models by 'multimer' metric
2024-12-11 17:50:03,468 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-11 17:54:20,950 Relaxation took 259.6s
2024-12-11 17:54:20,951 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.8 pTM=0.481 ipTM=0.511
2024-12-11 18:02:03,139 Relaxation took 462.2s
2024-12-11 18:02:03,139 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.6 pTM=0.473 ipTM=0.439
2024-12-11 18:13:01,549 Relaxation took 658.4s
2024-12-11 18:13:01,549 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.6 pTM=0.476 ipTM=0.344
2024-12-11 18:16:42,451 Relaxation took 220.9s
2024-12-11 18:16:42,452 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.9 pTM=0.433 ipTM=0.19
2024-12-11 18:23:59,030 Relaxation took 436.6s
2024-12-11 18:23:59,040 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.3 pTM=0.444 ipTM=0.175
2024-12-11 18:24:03,813 Done