2024-12-11 13:24:12,969 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-11 13:24:14,685 Running on GPU
2024-12-11 13:24:18,904 Found 6 citations for tools or databases
2024-12-11 13:24:18,904 Query 1/1: CCDC88A_SKP2 (length 2295)
2024-12-11 13:24:19,424 Sleeping for 5s. Reason: PENDING
2024-12-11 13:24:24,677 Sleeping for 6s. Reason: PENDING
2024-12-11 13:24:30,934 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:24:40,197 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:24:47,453 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:24:52,708 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:24:57,970 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:25:08,226 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:25:18,484 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:25:28,742 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:25:34,995 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:25:41,250 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:25:51,512 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:25:57,768 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:26:03,021 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:26:08,277 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:26:18,021 Sleeping for 8s. Reason: PENDING
2024-12-11 13:26:26,277 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:26:33,539 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:26:38,794 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:26:45,049 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:26:55,315 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:27:00,575 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:27:10,836 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:27:19,095 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:27:28,357 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:27:38,613 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:27:45,875 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:27:56,135 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:28:05,395 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:28:12,663 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:28:21,841 Setting max_seq=508, max_extra_seq=2048
2024-12-11 13:35:04,478 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=44.7 pTM=0.304 ipTM=0.215
2024-12-11 13:38:00,596 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=44 pTM=0.308 ipTM=0.231 tol=20.2
2024-12-11 13:40:56,504 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=43.2 pTM=0.31 ipTM=0.237 tol=12.7
2024-12-11 13:43:52,356 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=43 pTM=0.312 ipTM=0.276 tol=10.9
2024-12-11 13:46:48,375 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=42.8 pTM=0.314 ipTM=0.289 tol=7.28
2024-12-11 13:49:44,426 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=42.6 pTM=0.314 ipTM=0.292 tol=7.72
2024-12-11 13:52:40,482 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=42.3 pTM=0.314 ipTM=0.428 tol=8.23
2024-12-11 13:55:36,258 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=42.5 pTM=0.313 ipTM=0.312 tol=7.7
2024-12-11 13:58:31,884 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=43 pTM=0.312 ipTM=0.255 tol=8.74
2024-12-11 14:01:27,298 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=42.5 pTM=0.313 ipTM=0.298 tol=9.72
2024-12-11 14:04:22,801 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42.8 pTM=0.313 ipTM=0.369 tol=11.3
2024-12-11 14:07:18,667 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=42.5 pTM=0.312 ipTM=0.282 tol=9.38
2024-12-11 14:10:14,361 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=42.2 pTM=0.312 ipTM=0.276 tol=9.7
2024-12-11 14:13:09,887 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=42.7 pTM=0.31 ipTM=0.245 tol=11.1
2024-12-11 14:16:05,338 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42.6 pTM=0.311 ipTM=0.277 tol=7.9
2024-12-11 14:19:00,854 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=42.2 pTM=0.313 ipTM=0.329 tol=7.81
2024-12-11 14:21:56,618 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=42.4 pTM=0.312 ipTM=0.339 tol=7.67
2024-12-11 14:24:52,526 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=42.5 pTM=0.312 ipTM=0.327 tol=10.4
2024-12-11 14:27:48,533 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=42.5 pTM=0.311 ipTM=0.321 tol=8.76
2024-12-11 14:30:44,626 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42.3 pTM=0.31 ipTM=0.285 tol=7.34
2024-12-11 14:33:40,673 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=42.9 pTM=0.31 ipTM=0.344 tol=8.91
2024-12-11 14:36:36,760 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.5 pTM=0.311 ipTM=0.294 tol=10.1
2024-12-11 14:39:32,502 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42.7 pTM=0.308 ipTM=0.238 tol=9.06
2024-12-11 14:42:28,023 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=43 pTM=0.31 ipTM=0.272 tol=5.72
2024-12-11 14:45:23,646 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42.8 pTM=0.314 ipTM=0.422 tol=8.02
2024-12-11 14:48:19,076 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=42.7 pTM=0.312 ipTM=0.311 tol=6.7
2024-12-11 14:51:14,546 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=42.8 pTM=0.311 ipTM=0.285 tol=6.93
2024-12-11 14:54:10,227 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=42.6 pTM=0.311 ipTM=0.3 tol=6.72
2024-12-11 14:57:06,154 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=42.7 pTM=0.31 ipTM=0.287 tol=6.39
2024-12-11 15:00:02,259 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=42.4 pTM=0.311 ipTM=0.276 tol=5.98
2024-12-11 15:02:58,166 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=42.5 pTM=0.311 ipTM=0.325 tol=7.14
2024-12-11 15:02:58,168 alphafold2_multimer_v3_model_1_seed_000 took 5670.9s (30 recycles)
2024-12-11 15:05:58,122 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=43 pTM=0.307 ipTM=0.199
2024-12-11 15:08:54,494 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.1 pTM=0.306 ipTM=0.201 tol=36.7
2024-12-11 15:11:50,737 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=44.8 pTM=0.305 ipTM=0.207 tol=21.5
2024-12-11 15:14:46,850 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=45 pTM=0.305 ipTM=0.222 tol=18.4
2024-12-11 15:17:42,801 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=44.3 pTM=0.305 ipTM=0.236 tol=13.6
2024-12-11 15:20:38,703 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=44.4 pTM=0.304 ipTM=0.235 tol=12
2024-12-11 15:23:34,875 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=44.2 pTM=0.305 ipTM=0.245 tol=11.7
2024-12-11 15:26:31,301 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=44.3 pTM=0.305 ipTM=0.242 tol=12.7
2024-12-11 15:29:27,815 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=45.1 pTM=0.306 ipTM=0.244 tol=11.3
2024-12-11 15:32:24,472 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=44.8 pTM=0.305 ipTM=0.238 tol=10.6
2024-12-11 15:35:21,138 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=44.3 pTM=0.304 ipTM=0.236 tol=16.9
2024-12-11 15:38:17,892 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=45 pTM=0.304 ipTM=0.241 tol=12
2024-12-11 15:41:14,505 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=45 pTM=0.304 ipTM=0.241 tol=11.1
2024-12-11 15:44:10,920 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=45.3 pTM=0.303 ipTM=0.236 tol=13
2024-12-11 15:47:07,059 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=44.9 pTM=0.304 ipTM=0.238 tol=9.78
2024-12-11 15:50:03,130 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=45.2 pTM=0.304 ipTM=0.243 tol=8.87
2024-12-11 15:52:59,276 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=45.1 pTM=0.303 ipTM=0.239 tol=8.85
2024-12-11 15:55:55,427 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=45 pTM=0.305 ipTM=0.243 tol=10.6
2024-12-11 15:58:51,788 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=44.7 pTM=0.304 ipTM=0.24 tol=13.2
2024-12-11 16:01:48,309 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=44.2 pTM=0.304 ipTM=0.239 tol=15.6
2024-12-11 16:04:44,714 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=44.8 pTM=0.304 ipTM=0.24 tol=13.1
2024-12-11 16:07:41,239 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=44.2 pTM=0.304 ipTM=0.241 tol=13
2024-12-11 16:10:37,841 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=44 pTM=0.303 ipTM=0.237 tol=12.2
2024-12-11 16:13:34,367 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=44.1 pTM=0.304 ipTM=0.24 tol=14.6
2024-12-11 16:16:30,907 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=44.7 pTM=0.302 ipTM=0.238 tol=14.6
2024-12-11 16:19:27,535 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=44.6 pTM=0.304 ipTM=0.24 tol=14.2
2024-12-11 16:22:24,311 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=45 pTM=0.306 ipTM=0.281 tol=15.2
2024-12-11 16:25:20,492 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=44.6 pTM=0.307 ipTM=0.271 tol=13.7
2024-12-11 16:28:16,430 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=45.1 pTM=0.306 ipTM=0.245 tol=11.4
2024-12-11 16:31:12,577 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=44.5 pTM=0.304 ipTM=0.223 tol=13.6
2024-12-11 16:34:08,875 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=44.8 pTM=0.306 ipTM=0.234 tol=13.1
2024-12-11 16:34:08,878 alphafold2_multimer_v3_model_2_seed_000 took 5466.9s (30 recycles)
2024-12-11 16:37:09,674 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=41.9 pTM=0.3 ipTM=0.227
2024-12-11 16:40:06,713 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=42.5 pTM=0.301 ipTM=0.218 tol=25.3
2024-12-11 16:43:03,775 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=42.2 pTM=0.302 ipTM=0.238 tol=19.2
2024-12-11 16:46:00,756 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=42.6 pTM=0.302 ipTM=0.269 tol=14.3
2024-12-11 16:48:57,801 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=43.1 pTM=0.302 ipTM=0.277 tol=14.3
2024-12-11 16:51:54,856 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=43 pTM=0.304 ipTM=0.334 tol=11.8
2024-12-11 16:54:51,781 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.2 pTM=0.303 ipTM=0.304 tol=8.58
2024-12-11 16:57:48,827 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=43.4 pTM=0.304 ipTM=0.289 tol=8.96
2024-12-11 17:00:45,672 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=43.8 pTM=0.304 ipTM=0.301 tol=7.68
2024-12-11 17:03:42,236 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=43.7 pTM=0.304 ipTM=0.279 tol=6.81
2024-12-11 17:06:38,655 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=43.7 pTM=0.304 ipTM=0.293 tol=6.86
2024-12-11 17:09:35,153 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=43.6 pTM=0.305 ipTM=0.312 tol=7.16
2024-12-11 17:12:31,451 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=43.8 pTM=0.305 ipTM=0.304 tol=6.64
2024-12-11 17:15:27,681 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=43.9 pTM=0.305 ipTM=0.28 tol=4.9
2024-12-11 17:18:23,979 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=43.9 pTM=0.306 ipTM=0.309 tol=6.57
2024-12-11 17:21:20,226 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44 pTM=0.305 ipTM=0.291 tol=7.07
2024-12-11 17:24:16,510 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=43.8 pTM=0.306 ipTM=0.328 tol=8.28
2024-12-11 17:27:12,718 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=43.7 pTM=0.305 ipTM=0.29 tol=8.02
2024-12-11 17:30:08,863 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=43.8 pTM=0.307 ipTM=0.319 tol=7.54
2024-12-11 17:33:05,083 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=43.8 pTM=0.306 ipTM=0.292 tol=9.66
2024-12-11 17:36:01,298 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=43.8 pTM=0.308 ipTM=0.313 tol=7.17
2024-12-11 17:38:57,448 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=43.7 pTM=0.307 ipTM=0.291 tol=5.59
2024-12-11 17:41:53,591 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=43.6 pTM=0.308 ipTM=0.309 tol=8.8
2024-12-11 17:44:49,814 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=43.5 pTM=0.307 ipTM=0.292 tol=4.64
2024-12-11 17:47:46,089 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=43.8 pTM=0.308 ipTM=0.312 tol=6.58
2024-12-11 17:50:42,481 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=44 pTM=0.309 ipTM=0.293 tol=7.25
2024-12-11 17:53:38,859 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=43.7 pTM=0.31 ipTM=0.323 tol=5.84
2024-12-11 17:56:35,141 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=43.5 pTM=0.309 ipTM=0.287 tol=5.98
2024-12-11 17:59:31,200 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=43.7 pTM=0.312 ipTM=0.334 tol=5.66
2024-12-11 18:02:27,366 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=43.5 pTM=0.309 ipTM=0.296 tol=5.35
2024-12-11 18:05:23,617 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=43.6 pTM=0.312 ipTM=0.342 tol=5.36
2024-12-11 18:05:23,620 alphafold2_multimer_v3_model_3_seed_000 took 5470.9s (30 recycles)
2024-12-11 18:08:23,717 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=40.9 pTM=0.307 ipTM=0.274
2024-12-11 18:11:20,509 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=42.3 pTM=0.303 ipTM=0.245 tol=23.3
2024-12-11 18:14:17,416 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=41.9 pTM=0.303 ipTM=0.25 tol=19.9
2024-12-11 18:17:14,301 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=41.8 pTM=0.303 ipTM=0.257 tol=12.1
2024-12-11 18:20:11,138 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=42.1 pTM=0.304 ipTM=0.25 tol=12
2024-12-11 18:23:07,482 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=42.5 pTM=0.306 ipTM=0.261 tol=10.6
2024-12-11 18:26:03,633 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=41.8 pTM=0.305 ipTM=0.258 tol=8.69
2024-12-11 18:28:59,648 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=42 pTM=0.306 ipTM=0.262 tol=9.06
2024-12-11 18:31:55,870 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=41.9 pTM=0.306 ipTM=0.267 tol=15.3
2024-12-11 18:34:52,313 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=42.6 pTM=0.306 ipTM=0.275 tol=12.5
2024-12-11 18:37:48,680 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=42.9 pTM=0.308 ipTM=0.284 tol=10.2
2024-12-11 18:40:45,420 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=43 pTM=0.306 ipTM=0.289 tol=10.4
2024-12-11 18:43:42,284 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=42.6 pTM=0.307 ipTM=0.268 tol=8.95
2024-12-11 18:46:39,248 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=42.3 pTM=0.309 ipTM=0.271 tol=9.24
2024-12-11 18:49:35,806 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=42.2 pTM=0.326 ipTM=0.473 tol=8.2
2024-12-11 18:52:32,415 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=42.3 pTM=0.319 ipTM=0.374 tol=9.52
2024-12-11 18:55:29,056 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=42.3 pTM=0.322 ipTM=0.383 tol=11.5
2024-12-11 18:58:25,795 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=42.3 pTM=0.32 ipTM=0.386 tol=8.59
2024-12-11 19:01:22,718 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=42.7 pTM=0.321 ipTM=0.375 tol=7.38
2024-12-11 19:04:19,496 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=42.5 pTM=0.315 ipTM=0.315 tol=7.31
2024-12-11 19:07:16,281 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43 pTM=0.316 ipTM=0.323 tol=6.67
2024-12-11 19:10:12,943 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=42.6 pTM=0.315 ipTM=0.315 tol=6.47
2024-12-11 19:13:09,482 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42.2 pTM=0.313 ipTM=0.309 tol=6.73
2024-12-11 19:16:05,828 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=42.1 pTM=0.31 ipTM=0.271 tol=8.09
2024-12-11 19:19:02,027 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=42.4 pTM=0.314 ipTM=0.321 tol=7.85
2024-12-11 19:21:58,343 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=42.5 pTM=0.316 ipTM=0.347 tol=6.29
2024-12-11 19:24:54,998 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=42.2 pTM=0.312 ipTM=0.276 tol=6.28
2024-12-11 19:27:51,892 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=42.2 pTM=0.309 ipTM=0.274 tol=6.75
2024-12-11 19:30:48,850 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=42.1 pTM=0.312 ipTM=0.296 tol=6.95
2024-12-11 19:33:45,876 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=42.2 pTM=0.309 ipTM=0.287 tol=9.09
2024-12-11 19:36:42,584 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=42.1 pTM=0.311 ipTM=0.285 tol=7.53
2024-12-11 19:36:42,586 alphafold2_multimer_v3_model_4_seed_000 took 5475.1s (30 recycles)
2024-12-11 19:39:43,165 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44.2 pTM=0.299 ipTM=0.208
2024-12-11 19:42:40,218 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.3 pTM=0.3 ipTM=0.212 tol=20.7
2024-12-11 19:45:37,229 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=44.7 pTM=0.302 ipTM=0.26 tol=14.9
2024-12-11 19:48:34,174 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=44.6 pTM=0.302 ipTM=0.277 tol=9.77
2024-12-11 19:51:30,737 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=45.2 pTM=0.303 ipTM=0.259 tol=7.8
2024-12-11 19:54:27,128 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=44.6 pTM=0.302 ipTM=0.257 tol=5.82
2024-12-11 19:57:23,477 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=44.3 pTM=0.302 ipTM=0.274 tol=6.39
2024-12-11 20:00:19,768 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=44.8 pTM=0.302 ipTM=0.253 tol=6.26
2024-12-11 20:03:16,038 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=44.9 pTM=0.303 ipTM=0.256 tol=6.9
2024-12-11 20:06:12,361 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=44 pTM=0.303 ipTM=0.248 tol=6.99
2024-12-11 20:09:08,746 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=45.2 pTM=0.302 ipTM=0.253 tol=8.07
2024-12-11 20:12:05,104 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=44.9 pTM=0.303 ipTM=0.247 tol=7.34
2024-12-11 20:15:01,801 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=44.3 pTM=0.302 ipTM=0.253 tol=6.14
2024-12-11 20:17:58,765 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=44.9 pTM=0.303 ipTM=0.256 tol=9.23
2024-12-11 20:20:55,563 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=45.2 pTM=0.303 ipTM=0.25 tol=6.15
2024-12-11 20:23:52,016 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=44.6 pTM=0.302 ipTM=0.247 tol=5.43
2024-12-11 20:26:48,239 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=45.3 pTM=0.303 ipTM=0.256 tol=7.54
2024-12-11 20:29:44,582 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=44.5 pTM=0.302 ipTM=0.251 tol=6.85
2024-12-11 20:32:41,000 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=45.2 pTM=0.303 ipTM=0.251 tol=8.73
2024-12-11 20:35:37,364 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=45.1 pTM=0.303 ipTM=0.245 tol=8.5
2024-12-11 20:38:33,772 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=45 pTM=0.303 ipTM=0.252 tol=5.66
2024-12-11 20:41:30,172 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=44.2 pTM=0.304 ipTM=0.264 tol=5.54
2024-12-11 20:44:26,381 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=45.2 pTM=0.304 ipTM=0.253 tol=5.63
2024-12-11 20:47:22,541 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=44.6 pTM=0.304 ipTM=0.272 tol=5.54
2024-12-11 20:50:18,685 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=45.3 pTM=0.304 ipTM=0.262 tol=7.52
2024-12-11 20:53:14,836 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=45.4 pTM=0.304 ipTM=0.252 tol=8.12
2024-12-11 20:56:11,105 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=45.2 pTM=0.304 ipTM=0.249 tol=7.48
2024-12-11 20:59:07,423 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=45.3 pTM=0.305 ipTM=0.257 tol=5.96
2024-12-11 21:02:03,621 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=45.2 pTM=0.305 ipTM=0.249 tol=7.32
2024-12-11 21:04:59,935 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=45.3 pTM=0.304 ipTM=0.247 tol=7.98
2024-12-11 21:07:56,270 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=45.3 pTM=0.304 ipTM=0.249 tol=7.55
2024-12-11 21:07:56,272 alphafold2_multimer_v3_model_5_seed_000 took 5469.8s (30 recycles)
2024-12-11 21:08:00,132 reranking models by 'multimer' metric
2024-12-11 21:08:02,816 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-11 21:14:36,437 Relaxation took 396.3s
2024-12-11 21:14:36,437 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=43.6 pTM=0.312 ipTM=0.342
2024-12-11 21:27:35,065 Relaxation took 778.6s
2024-12-11 21:27:35,065 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=42.5 pTM=0.311 ipTM=0.325
2024-12-12 01:34:55,912 Relaxation took 14840.8s
2024-12-12 01:34:55,913 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=42.1 pTM=0.311 ipTM=0.285
2024-12-12 01:41:38,103 Relaxation took 402.2s
2024-12-12 01:41:38,103 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=45.3 pTM=0.304 ipTM=0.249
2024-12-12 01:52:26,089 Relaxation took 648.0s
2024-12-12 01:52:26,090 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=44.8 pTM=0.306 ipTM=0.234
2024-12-12 01:52:34,039 Done