2024-12-05 05:33:27,243 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 05:33:27,556 Running on GPU
2024-12-05 05:33:30,905 Found 6 citations for tools or databases
2024-12-05 05:33:30,906 Query 1/1: CDC16_CEP164 (length 2080)
2024-12-05 05:33:31,218 Sleeping for 10s. Reason: PENDING
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2024-12-05 05:35:02,310 Sleeping for 10s. Reason: RUNNING
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2024-12-05 05:36:06,113 Sleeping for 7s. Reason: RUNNING
2024-12-05 05:36:14,943 Sleeping for 7s. Reason: PENDING
2024-12-05 05:36:22,206 Sleeping for 5s. Reason: RUNNING
2024-12-05 05:36:27,467 Sleeping for 6s. Reason: RUNNING
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2024-12-05 05:36:38,986 Sleeping for 9s. Reason: RUNNING
2024-12-05 05:36:48,242 Sleeping for 7s. Reason: RUNNING
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2024-12-05 05:37:03,747 Sleeping for 5s. Reason: RUNNING
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2024-12-05 05:37:16,266 Sleeping for 8s. Reason: RUNNING
2024-12-05 05:37:24,521 Sleeping for 7s. Reason: RUNNING
2024-12-05 05:37:31,780 Sleeping for 9s. Reason: RUNNING
2024-12-05 05:37:41,041 Sleeping for 8s. Reason: RUNNING
2024-12-05 05:37:49,290 Sleeping for 9s. Reason: RUNNING
2024-12-05 05:37:58,549 Sleeping for 10s. Reason: RUNNING
2024-12-05 05:38:08,805 Sleeping for 5s. Reason: RUNNING
2024-12-05 05:38:19,812 Setting max_seq=508, max_extra_seq=2048
2024-12-05 05:43:09,637 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=47 pTM=0.374 ipTM=0.222
2024-12-05 05:45:58,279 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.6 pTM=0.371 ipTM=0.217 tol=18.5
2024-12-05 05:48:46,887 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.3 pTM=0.375 ipTM=0.233 tol=19.3
2024-12-05 05:51:35,433 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=45.2 pTM=0.375 ipTM=0.221 tol=13.9
2024-12-05 05:54:24,015 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=45.1 pTM=0.379 ipTM=0.281 tol=9.64
2024-12-05 05:57:12,625 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=45.2 pTM=0.374 ipTM=0.226 tol=7.49
2024-12-05 06:00:01,234 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=45.3 pTM=0.373 ipTM=0.229 tol=7.22
2024-12-05 06:02:49,876 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=45.3 pTM=0.373 ipTM=0.219 tol=7.11
2024-12-05 06:05:38,538 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=45.4 pTM=0.376 ipTM=0.26 tol=9.16
2024-12-05 06:08:27,193 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=45.5 pTM=0.373 ipTM=0.222 tol=9.09
2024-12-05 06:11:15,898 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=45.7 pTM=0.373 ipTM=0.221 tol=9.27
2024-12-05 06:14:04,562 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=45.5 pTM=0.375 ipTM=0.431 tol=11.4
2024-12-05 06:16:53,121 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=45.4 pTM=0.372 ipTM=0.213 tol=9.08
2024-12-05 06:19:41,749 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=45.2 pTM=0.372 ipTM=0.206 tol=5.74
2024-12-05 06:22:30,318 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=45.2 pTM=0.372 ipTM=0.238 tol=8.64
2024-12-05 06:25:18,929 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=45.6 pTM=0.371 ipTM=0.216 tol=8.45
2024-12-05 06:28:07,576 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45.4 pTM=0.371 ipTM=0.205 tol=6.41
2024-12-05 06:30:56,205 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=45.4 pTM=0.372 ipTM=0.288 tol=8.2
2024-12-05 06:33:44,914 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=45.6 pTM=0.37 ipTM=0.216 tol=13.6
2024-12-05 06:36:33,625 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=45.2 pTM=0.371 ipTM=0.321 tol=11.2
2024-12-05 06:39:22,287 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45.5 pTM=0.371 ipTM=0.23 tol=10.4
2024-12-05 06:42:10,950 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45.9 pTM=0.374 ipTM=0.338 tol=8.28
2024-12-05 06:44:59,583 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=45.5 pTM=0.373 ipTM=0.263 tol=6.32
2024-12-05 06:47:48,248 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=45.7 pTM=0.373 ipTM=0.315 tol=8.16
2024-12-05 06:50:36,895 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45.4 pTM=0.373 ipTM=0.323 tol=8.48
2024-12-05 06:53:25,533 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45.6 pTM=0.373 ipTM=0.339 tol=6.9
2024-12-05 06:56:14,175 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=45.7 pTM=0.374 ipTM=0.318 tol=7.9
2024-12-05 06:59:02,803 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=46.1 pTM=0.374 ipTM=0.316 tol=10.9
2024-12-05 07:01:51,471 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=45.7 pTM=0.373 ipTM=0.32 tol=9.56
2024-12-05 07:04:40,096 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=45.5 pTM=0.373 ipTM=0.302 tol=8.94
2024-12-05 07:07:28,737 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45.6 pTM=0.375 ipTM=0.333 tol=6.17
2024-12-05 07:07:28,739 alphafold2_multimer_v3_model_1_seed_000 took 5343.8s (30 recycles)
2024-12-05 07:10:20,269 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.7 pTM=0.37 ipTM=0.194
2024-12-05 07:13:09,333 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.3 pTM=0.375 ipTM=0.21 tol=18.5
2024-12-05 07:15:58,319 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.2 pTM=0.377 ipTM=0.311 tol=16.7
2024-12-05 07:18:47,297 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46.8 pTM=0.377 ipTM=0.339 tol=17.7
2024-12-05 07:21:36,310 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.1 pTM=0.376 ipTM=0.411 tol=12.2
2024-12-05 07:24:25,205 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.3 pTM=0.379 ipTM=0.409 tol=8.16
2024-12-05 07:27:14,125 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.2 pTM=0.376 ipTM=0.404 tol=8.62
2024-12-05 07:30:03,060 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47.1 pTM=0.376 ipTM=0.386 tol=9.31
2024-12-05 07:32:51,941 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.6 pTM=0.375 ipTM=0.38 tol=9.18
2024-12-05 07:35:40,783 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.8 pTM=0.378 ipTM=0.397 tol=6.77
2024-12-05 07:38:29,660 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.8 pTM=0.374 ipTM=0.381 tol=4.83
2024-12-05 07:41:18,605 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.9 pTM=0.375 ipTM=0.376 tol=4.88
2024-12-05 07:44:07,514 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.7 pTM=0.378 ipTM=0.349 tol=5.21
2024-12-05 07:46:56,438 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.6 pTM=0.377 ipTM=0.355 tol=4.34
2024-12-05 07:49:45,297 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.8 pTM=0.38 ipTM=0.335 tol=4.28
2024-12-05 07:52:34,169 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48 pTM=0.378 ipTM=0.392 tol=3.92
2024-12-05 07:55:23,026 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.8 pTM=0.377 ipTM=0.366 tol=3.4
2024-12-05 07:58:11,880 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47.5 pTM=0.375 ipTM=0.374 tol=3.88
2024-12-05 08:01:00,772 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.4 pTM=0.379 ipTM=0.372 tol=6.56
2024-12-05 08:03:49,671 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.6 pTM=0.377 ipTM=0.407 tol=5.02
2024-12-05 08:06:38,571 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.7 pTM=0.375 ipTM=0.398 tol=5.18
2024-12-05 08:09:27,457 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47.5 pTM=0.379 ipTM=0.412 tol=6.3
2024-12-05 08:12:16,363 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.5 pTM=0.375 ipTM=0.396 tol=6.07
2024-12-05 08:15:05,322 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.5 pTM=0.376 ipTM=0.361 tol=8.53
2024-12-05 08:17:54,207 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.2 pTM=0.377 ipTM=0.404 tol=7.27
2024-12-05 08:20:43,148 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.2 pTM=0.377 ipTM=0.372 tol=6.7
2024-12-05 08:23:32,074 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47.2 pTM=0.378 ipTM=0.379 tol=4.58
2024-12-05 08:26:21,020 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.3 pTM=0.379 ipTM=0.392 tol=4.48
2024-12-05 08:29:09,946 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.1 pTM=0.38 ipTM=0.401 tol=5.14
2024-12-05 08:31:58,897 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=46.9 pTM=0.377 ipTM=0.392 tol=4.91
2024-12-05 08:34:47,725 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.4 pTM=0.38 ipTM=0.387 tol=5.19
2024-12-05 08:34:47,728 alphafold2_multimer_v3_model_2_seed_000 took 5236.5s (30 recycles)
2024-12-05 08:37:39,375 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=43.3 pTM=0.365 ipTM=0.218
2024-12-05 08:40:28,762 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=42.6 pTM=0.374 ipTM=0.209 tol=28.2
2024-12-05 08:43:18,034 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=42.5 pTM=0.379 ipTM=0.229 tol=26.5
2024-12-05 08:46:07,353 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=42.6 pTM=0.375 ipTM=0.224 tol=19.1
2024-12-05 08:48:56,628 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=43.9 pTM=0.376 ipTM=0.215 tol=20.1
2024-12-05 08:51:45,979 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=44 pTM=0.377 ipTM=0.234 tol=15.1
2024-12-05 08:54:35,303 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.8 pTM=0.375 ipTM=0.213 tol=12.1
2024-12-05 08:57:24,548 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=44 pTM=0.38 ipTM=0.462 tol=10.9
2024-12-05 09:00:13,823 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=44.3 pTM=0.38 ipTM=0.422 tol=9.98
2024-12-05 09:03:03,088 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=44.2 pTM=0.382 ipTM=0.452 tol=9.38
2024-12-05 09:05:52,360 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=44.4 pTM=0.377 ipTM=0.235 tol=12.5
2024-12-05 09:08:41,664 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=44.2 pTM=0.377 ipTM=0.275 tol=20
2024-12-05 09:11:30,951 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=44.4 pTM=0.376 ipTM=0.221 tol=13.1
2024-12-05 09:14:20,237 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=44.5 pTM=0.379 ipTM=0.29 tol=12.5
2024-12-05 09:17:09,578 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=44.5 pTM=0.378 ipTM=0.241 tol=12.8
2024-12-05 09:19:58,850 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44.7 pTM=0.38 ipTM=0.247 tol=6.02
2024-12-05 09:22:48,114 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=44.7 pTM=0.378 ipTM=0.247 tol=10.6
2024-12-05 09:25:37,344 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=44.8 pTM=0.381 ipTM=0.376 tol=11.9
2024-12-05 09:28:26,583 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=44.7 pTM=0.379 ipTM=0.238 tol=10.9
2024-12-05 09:31:15,846 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=44.8 pTM=0.379 ipTM=0.248 tol=9.84
2024-12-05 09:34:05,079 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45 pTM=0.382 ipTM=0.434 tol=5.04
2024-12-05 09:36:54,269 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=44.9 pTM=0.379 ipTM=0.241 tol=11.5
2024-12-05 09:39:43,555 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=44.6 pTM=0.377 ipTM=0.249 tol=10.9
2024-12-05 09:42:32,847 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=44.5 pTM=0.378 ipTM=0.277 tol=12.9
2024-12-05 09:45:22,100 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=44.5 pTM=0.377 ipTM=0.239 tol=7.37
2024-12-05 09:48:11,316 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=44.5 pTM=0.38 ipTM=0.337 tol=10.5
2024-12-05 09:51:00,465 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=44.6 pTM=0.382 ipTM=0.326 tol=6.69
2024-12-05 09:53:49,683 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=44.7 pTM=0.378 ipTM=0.243 tol=11.7
2024-12-05 09:56:38,925 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=44.6 pTM=0.38 ipTM=0.255 tol=12.9
2024-12-05 09:59:28,145 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=44.7 pTM=0.378 ipTM=0.245 tol=10.8
2024-12-05 10:02:17,341 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=44.7 pTM=0.38 ipTM=0.321 tol=6.74
2024-12-05 10:02:17,343 alphafold2_multimer_v3_model_3_seed_000 took 5247.1s (30 recycles)
2024-12-05 10:05:09,409 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.2 pTM=0.357 ipTM=0.21
2024-12-05 10:07:58,693 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=41.4 pTM=0.369 ipTM=0.203 tol=24.7
2024-12-05 10:10:47,981 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=42.4 pTM=0.371 ipTM=0.217 tol=22.3
2024-12-05 10:13:37,275 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=42.4 pTM=0.373 ipTM=0.251 tol=16.6
2024-12-05 10:16:26,615 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=43 pTM=0.369 ipTM=0.204 tol=18.7
2024-12-05 10:19:16,039 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=42.6 pTM=0.369 ipTM=0.206 tol=13.1
2024-12-05 10:22:05,484 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=42.7 pTM=0.369 ipTM=0.211 tol=15.9
2024-12-05 10:24:54,924 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=42.7 pTM=0.37 ipTM=0.212 tol=17
2024-12-05 10:27:44,377 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=43.3 pTM=0.369 ipTM=0.216 tol=19.1
2024-12-05 10:30:33,828 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=42.9 pTM=0.371 ipTM=0.266 tol=10.7
2024-12-05 10:33:23,286 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=43.2 pTM=0.371 ipTM=0.255 tol=13.9
2024-12-05 10:36:12,733 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=42.9 pTM=0.371 ipTM=0.27 tol=14.5
2024-12-05 10:39:02,128 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=42.9 pTM=0.372 ipTM=0.297 tol=13
2024-12-05 10:41:51,532 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=43 pTM=0.373 ipTM=0.309 tol=12.1
2024-12-05 10:44:40,869 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=43.4 pTM=0.372 ipTM=0.271 tol=14.4
2024-12-05 10:47:30,329 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=43.5 pTM=0.371 ipTM=0.236 tol=13.3
2024-12-05 10:50:19,720 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=43.6 pTM=0.371 ipTM=0.248 tol=12.3
2024-12-05 10:53:09,118 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43.6 pTM=0.371 ipTM=0.255 tol=10.8
2024-12-05 10:55:58,603 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.8 pTM=0.371 ipTM=0.288 tol=11.7
2024-12-05 10:58:48,010 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=43.6 pTM=0.372 ipTM=0.284 tol=9.95
2024-12-05 11:01:37,414 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.7 pTM=0.374 ipTM=0.315 tol=9.84
2024-12-05 11:04:26,812 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=43.5 pTM=0.372 ipTM=0.265 tol=8.3
2024-12-05 11:07:16,142 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=43.5 pTM=0.371 ipTM=0.224 tol=9.23
2024-12-05 11:10:05,514 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=43.6 pTM=0.372 ipTM=0.243 tol=7.56
2024-12-05 11:12:54,884 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=43.3 pTM=0.373 ipTM=0.294 tol=7.56
2024-12-05 11:15:44,297 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=43.7 pTM=0.372 ipTM=0.27 tol=10
2024-12-05 11:18:33,721 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=43.7 pTM=0.371 ipTM=0.251 tol=16.5
2024-12-05 11:21:23,106 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43.2 pTM=0.373 ipTM=0.267 tol=14.8
2024-12-05 11:24:12,578 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43.4 pTM=0.371 ipTM=0.237 tol=10.8
2024-12-05 11:27:01,956 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=43.4 pTM=0.371 ipTM=0.261 tol=14.7
2024-12-05 11:29:51,392 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=43.6 pTM=0.372 ipTM=0.277 tol=14.8
2024-12-05 11:29:51,394 alphafold2_multimer_v3_model_4_seed_000 took 5251.5s (30 recycles)
2024-12-05 11:32:43,293 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44.6 pTM=0.368 ipTM=0.194
2024-12-05 11:35:32,597 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.4 pTM=0.377 ipTM=0.193 tol=22.6
2024-12-05 11:38:21,846 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=44.4 pTM=0.376 ipTM=0.204 tol=11.7
2024-12-05 11:41:11,093 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=44.4 pTM=0.375 ipTM=0.201 tol=8.16
2024-12-05 11:44:00,367 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=44.5 pTM=0.375 ipTM=0.199 tol=12.5
2024-12-05 11:46:49,684 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=44.3 pTM=0.375 ipTM=0.202 tol=12.8
2024-12-05 11:49:38,910 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=44.6 pTM=0.375 ipTM=0.202 tol=13.4
2024-12-05 11:52:28,200 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=44.5 pTM=0.375 ipTM=0.201 tol=13
2024-12-05 11:55:17,499 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=44.8 pTM=0.374 ipTM=0.203 tol=14.1
2024-12-05 11:58:06,747 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=44.8 pTM=0.375 ipTM=0.2 tol=9.09
2024-12-05 12:00:56,012 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=44.9 pTM=0.376 ipTM=0.201 tol=9.1
2024-12-05 12:03:45,280 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=44.6 pTM=0.375 ipTM=0.201 tol=12.8
2024-12-05 12:06:34,585 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=44.6 pTM=0.375 ipTM=0.202 tol=9.6
2024-12-05 12:09:23,772 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=44.5 pTM=0.376 ipTM=0.203 tol=9.8
2024-12-05 12:12:13,023 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=44.2 pTM=0.376 ipTM=0.203 tol=6.69
2024-12-05 12:15:02,225 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=44.4 pTM=0.376 ipTM=0.201 tol=11.9
2024-12-05 12:17:51,444 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=44.2 pTM=0.376 ipTM=0.2 tol=11.1
2024-12-05 12:20:40,699 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=44.4 pTM=0.375 ipTM=0.199 tol=13.3
2024-12-05 12:23:29,933 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=44.4 pTM=0.375 ipTM=0.201 tol=11.8
2024-12-05 12:26:19,132 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=44.3 pTM=0.376 ipTM=0.2 tol=8.01
2024-12-05 12:29:08,311 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=44.6 pTM=0.375 ipTM=0.201 tol=13.8
2024-12-05 12:31:57,562 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=44.5 pTM=0.376 ipTM=0.199 tol=11.1
2024-12-05 12:34:46,752 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=44.2 pTM=0.376 ipTM=0.201 tol=13.8
2024-12-05 12:37:35,950 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=44.3 pTM=0.376 ipTM=0.199 tol=16.1
2024-12-05 12:40:25,279 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=44.3 pTM=0.375 ipTM=0.2 tol=13
2024-12-05 12:43:14,557 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=44.2 pTM=0.375 ipTM=0.201 tol=16
2024-12-05 12:46:03,807 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=44.3 pTM=0.375 ipTM=0.2 tol=13.3
2024-12-05 12:48:53,053 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=44.5 pTM=0.376 ipTM=0.198 tol=9.4
2024-12-05 12:51:42,299 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=44.8 pTM=0.375 ipTM=0.2 tol=9.76
2024-12-05 12:54:31,505 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=44.1 pTM=0.375 ipTM=0.201 tol=7.25
2024-12-05 12:57:20,760 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=44.4 pTM=0.376 ipTM=0.199 tol=11.6
2024-12-05 12:57:20,762 alphafold2_multimer_v3_model_5_seed_000 took 5246.9s (30 recycles)
2024-12-05 12:57:23,263 reranking models by 'multimer' metric
2024-12-05 12:57:27,815 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 13:03:23,847 Relaxation took 360.6s
2024-12-05 13:03:23,847 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.4 pTM=0.38 ipTM=0.387
2024-12-05 13:11:59,396 Relaxation took 515.5s
2024-12-05 13:11:59,396 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45.6 pTM=0.375 ipTM=0.333
2024-12-05 13:18:54,324 Relaxation took 414.9s
2024-12-05 13:18:54,324 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=44.7 pTM=0.38 ipTM=0.321
2024-12-05 13:26:50,772 Relaxation took 476.4s
2024-12-05 13:26:50,773 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=43.6 pTM=0.372 ipTM=0.277
2024-12-05 13:37:20,793 Relaxation took 630.0s
2024-12-05 13:37:20,793 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=44.4 pTM=0.376 ipTM=0.199
2024-12-05 13:37:26,416 Done