2024-12-05 05:36:53,021 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 05:36:53,334 Running on GPU
2024-12-05 05:36:56,840 Found 6 citations for tools or databases
2024-12-05 05:36:56,840 Query 1/1: CDC16_MKS1 (length 1179)
2024-12-05 05:36:57,123 Sleeping for 8s. Reason: PENDING
2024-12-05 05:37:05,381 Sleeping for 5s. Reason: RUNNING
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2024-12-05 05:37:40,665 Sleeping for 9s. Reason: RUNNING
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2024-12-05 05:38:00,193 Sleeping for 8s. Reason: RUNNING
2024-12-05 05:38:08,448 Sleeping for 7s. Reason: RUNNING
2024-12-05 05:38:15,712 Sleeping for 7s. Reason: RUNNING
2024-12-05 05:38:22,967 Sleeping for 8s. Reason: RUNNING
2024-12-05 05:38:31,233 Sleeping for 9s. Reason: RUNNING
2024-12-05 05:38:40,487 Sleeping for 5s. Reason: RUNNING
2024-12-05 05:38:45,735 Sleeping for 8s. Reason: RUNNING
2024-12-05 05:38:53,990 Sleeping for 6s. Reason: RUNNING
2024-12-05 05:39:00,243 Sleeping for 8s. Reason: RUNNING
2024-12-05 05:39:08,505 Sleeping for 5s. Reason: RUNNING
2024-12-05 05:39:13,772 Sleeping for 9s. Reason: RUNNING
2024-12-05 05:39:23,029 Sleeping for 9s. Reason: RUNNING
2024-12-05 05:39:34,223 Sleeping for 7s. Reason: PENDING
2024-12-05 05:39:41,478 Sleeping for 9s. Reason: RUNNING
2024-12-05 05:39:50,734 Sleeping for 6s. Reason: RUNNING
2024-12-05 05:39:56,989 Sleeping for 8s. Reason: RUNNING
2024-12-05 05:40:05,247 Sleeping for 8s. Reason: RUNNING
2024-12-05 05:40:13,500 Sleeping for 6s. Reason: RUNNING
2024-12-05 05:40:19,753 Sleeping for 9s. Reason: RUNNING
2024-12-05 05:40:29,009 Sleeping for 9s. Reason: RUNNING
2024-12-05 05:40:38,268 Sleeping for 8s. Reason: RUNNING
2024-12-05 05:40:46,526 Sleeping for 7s. Reason: RUNNING
2024-12-05 05:40:53,788 Sleeping for 10s. Reason: RUNNING
2024-12-05 05:41:06,288 Setting max_seq=508, max_extra_seq=2048
2024-12-05 05:44:15,804 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.8 pTM=0.486 ipTM=0.209
2024-12-05 05:44:48,742 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.4 pTM=0.485 ipTM=0.169 tol=5.72
2024-12-05 05:45:21,818 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.9 pTM=0.493 ipTM=0.23 tol=5.61
2024-12-05 05:45:55,056 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.8 pTM=0.478 ipTM=0.16 tol=2.96
2024-12-05 05:46:28,393 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.2 pTM=0.482 ipTM=0.164 tol=2.04
2024-12-05 05:47:01,762 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.3 pTM=0.485 ipTM=0.172 tol=4.74
2024-12-05 05:47:35,138 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.6 pTM=0.484 ipTM=0.17 tol=2.61
2024-12-05 05:48:08,574 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.2 pTM=0.483 ipTM=0.162 tol=2.73
2024-12-05 05:48:42,024 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.1 pTM=0.484 ipTM=0.165 tol=2.45
2024-12-05 05:49:15,480 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.2 pTM=0.481 ipTM=0.159 tol=2.54
2024-12-05 05:49:48,944 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.9 pTM=0.482 ipTM=0.167 tol=6.07
2024-12-05 05:50:22,422 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.2 pTM=0.481 ipTM=0.159 tol=2.09
2024-12-05 05:50:55,912 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70 pTM=0.487 ipTM=0.19 tol=3.46
2024-12-05 05:51:29,436 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70 pTM=0.483 ipTM=0.157 tol=2.38
2024-12-05 05:52:02,983 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70 pTM=0.483 ipTM=0.158 tol=2.8
2024-12-05 05:52:36,481 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.6 pTM=0.483 ipTM=0.16 tol=1.84
2024-12-05 05:53:09,942 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.1 pTM=0.489 ipTM=0.185 tol=2.19
2024-12-05 05:53:43,441 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.9 pTM=0.48 ipTM=0.154 tol=2.14
2024-12-05 05:54:16,883 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.8 pTM=0.483 ipTM=0.157 tol=4.31
2024-12-05 05:54:50,323 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.6 pTM=0.483 ipTM=0.16 tol=2.96
2024-12-05 05:55:23,728 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.6 pTM=0.479 ipTM=0.161 tol=1.97
2024-12-05 05:55:57,129 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.4 pTM=0.482 ipTM=0.156 tol=5.04
2024-12-05 05:56:30,558 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.7 pTM=0.483 ipTM=0.157 tol=2.23
2024-12-05 05:57:04,044 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.8 pTM=0.48 ipTM=0.154 tol=1.44
2024-12-05 05:57:37,536 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.8 pTM=0.482 ipTM=0.157 tol=3.18
2024-12-05 05:58:11,013 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.6 pTM=0.481 ipTM=0.159 tol=1.79
2024-12-05 05:58:44,512 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.9 pTM=0.485 ipTM=0.173 tol=1.96
2024-12-05 05:59:17,985 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.6 pTM=0.486 ipTM=0.17 tol=4.26
2024-12-05 05:59:51,463 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.2 pTM=0.48 ipTM=0.16 tol=4.34
2024-12-05 06:00:24,925 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.9 pTM=0.482 ipTM=0.156 tol=5.68
2024-12-05 06:00:58,411 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.2 pTM=0.483 ipTM=0.158 tol=2.15
2024-12-05 06:00:58,412 alphafold2_multimer_v3_model_1_seed_000 took 1186.8s (30 recycles)
2024-12-05 06:01:32,719 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.4 pTM=0.478 ipTM=0.17
2024-12-05 06:02:06,209 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.6 pTM=0.479 ipTM=0.176 tol=4.31
2024-12-05 06:02:39,732 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.7 pTM=0.475 ipTM=0.176 tol=2.21
2024-12-05 06:03:13,281 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.9 pTM=0.475 ipTM=0.175 tol=1.5
2024-12-05 06:03:46,827 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70 pTM=0.473 ipTM=0.174 tol=1.55
2024-12-05 06:04:20,298 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=70.6 pTM=0.483 ipTM=0.238 tol=4.01
2024-12-05 06:04:53,794 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.5 pTM=0.478 ipTM=0.177 tol=3.08
2024-12-05 06:05:27,289 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=70.4 pTM=0.484 ipTM=0.2 tol=2.91
2024-12-05 06:06:00,801 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70.4 pTM=0.482 ipTM=0.189 tol=1.28
2024-12-05 06:06:34,313 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.1 pTM=0.481 ipTM=0.201 tol=1.9
2024-12-05 06:07:07,841 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.4 pTM=0.483 ipTM=0.191 tol=1.54
2024-12-05 06:07:41,335 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.5 pTM=0.487 ipTM=0.215 tol=1.55
2024-12-05 06:08:14,834 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.7 pTM=0.492 ipTM=0.24 tol=3.04
2024-12-05 06:08:48,334 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.4 pTM=0.488 ipTM=0.21 tol=3.03
2024-12-05 06:09:21,846 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.6 pTM=0.482 ipTM=0.196 tol=1.7
2024-12-05 06:09:55,325 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.8 pTM=0.491 ipTM=0.241 tol=3.59
2024-12-05 06:10:28,801 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.9 pTM=0.495 ipTM=0.246 tol=1.12
2024-12-05 06:11:02,296 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.8 pTM=0.494 ipTM=0.24 tol=1.45
2024-12-05 06:11:35,803 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.2 pTM=0.485 ipTM=0.212 tol=1.51
2024-12-05 06:12:09,315 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70 pTM=0.478 ipTM=0.194 tol=3.06
2024-12-05 06:12:42,830 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.1 pTM=0.477 ipTM=0.189 tol=0.958
2024-12-05 06:13:16,329 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=70.1 pTM=0.479 ipTM=0.19 tol=1.48
2024-12-05 06:13:49,848 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.1 pTM=0.479 ipTM=0.194 tol=0.722
2024-12-05 06:14:23,374 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.8 pTM=0.476 ipTM=0.198 tol=0.945
2024-12-05 06:14:56,930 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.9 pTM=0.476 ipTM=0.189 tol=1.2
2024-12-05 06:15:30,483 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.9 pTM=0.479 ipTM=0.196 tol=1.9
2024-12-05 06:16:04,011 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.2 pTM=0.486 ipTM=0.233 tol=2.24
2024-12-05 06:16:37,498 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=70.8 pTM=0.494 ipTM=0.241 tol=1.71
2024-12-05 06:17:10,967 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70.2 pTM=0.481 ipTM=0.209 tol=1.69
2024-12-05 06:17:44,412 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=70.1 pTM=0.478 ipTM=0.193 tol=1.52
2024-12-05 06:18:17,875 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.9 pTM=0.475 ipTM=0.183 tol=2.73
2024-12-05 06:18:17,876 alphafold2_multimer_v3_model_2_seed_000 took 1038.6s (30 recycles)
2024-12-05 06:18:52,089 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.4 pTM=0.463 ipTM=0.221
2024-12-05 06:19:25,584 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.9 pTM=0.464 ipTM=0.144 tol=10.1
2024-12-05 06:19:59,120 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69 pTM=0.463 ipTM=0.145 tol=5.54
2024-12-05 06:20:32,692 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.4 pTM=0.465 ipTM=0.146 tol=3.35
2024-12-05 06:21:06,263 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=69.2 pTM=0.467 ipTM=0.146 tol=2.46
2024-12-05 06:21:39,864 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.9 pTM=0.47 ipTM=0.149 tol=2.59
2024-12-05 06:22:13,471 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=69.8 pTM=0.47 ipTM=0.152 tol=1.61
2024-12-05 06:22:47,082 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.6 pTM=0.468 ipTM=0.149 tol=1.84
2024-12-05 06:23:20,711 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.6 pTM=0.47 ipTM=0.151 tol=2.05
2024-12-05 06:23:54,292 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.6 pTM=0.468 ipTM=0.152 tol=2.48
2024-12-05 06:24:27,838 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.5 pTM=0.467 ipTM=0.154 tol=2.64
2024-12-05 06:25:01,347 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.8 pTM=0.468 ipTM=0.153 tol=1.92
2024-12-05 06:25:34,837 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70 pTM=0.469 ipTM=0.152 tol=1.3
2024-12-05 06:26:08,324 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.1 pTM=0.471 ipTM=0.156 tol=1.87
2024-12-05 06:26:41,810 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70 pTM=0.472 ipTM=0.159 tol=1.87
2024-12-05 06:27:15,304 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.8 pTM=0.471 ipTM=0.156 tol=1.53
2024-12-05 06:27:48,797 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70 pTM=0.469 ipTM=0.155 tol=1.26
2024-12-05 06:28:22,262 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.2 pTM=0.471 ipTM=0.156 tol=1.54
2024-12-05 06:28:55,737 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.2 pTM=0.471 ipTM=0.156 tol=1.14
2024-12-05 06:29:29,198 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.2 pTM=0.47 ipTM=0.157 tol=0.848
2024-12-05 06:30:02,656 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.3 pTM=0.469 ipTM=0.156 tol=0.858
2024-12-05 06:30:36,155 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.1 pTM=0.469 ipTM=0.157 tol=0.839
2024-12-05 06:31:09,653 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.2 pTM=0.469 ipTM=0.157 tol=1.1
2024-12-05 06:31:43,165 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.3 pTM=0.468 ipTM=0.155 tol=0.987
2024-12-05 06:32:16,659 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.6 pTM=0.471 ipTM=0.156 tol=1.41
2024-12-05 06:32:50,125 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.4 pTM=0.468 ipTM=0.157 tol=0.964
2024-12-05 06:33:23,570 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.3 pTM=0.47 ipTM=0.157 tol=1.03
2024-12-05 06:33:57,057 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.6 pTM=0.471 ipTM=0.158 tol=1.4
2024-12-05 06:34:30,541 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.5 pTM=0.469 ipTM=0.155 tol=1.52
2024-12-05 06:35:03,993 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.5 pTM=0.471 ipTM=0.157 tol=1.84
2024-12-05 06:35:37,482 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.6 pTM=0.471 ipTM=0.156 tol=1.05
2024-12-05 06:35:37,483 alphafold2_multimer_v3_model_3_seed_000 took 1038.8s (30 recycles)
2024-12-05 06:36:11,813 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.9 pTM=0.448 ipTM=0.161
2024-12-05 06:36:45,288 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.1 pTM=0.483 ipTM=0.162 tol=9.27
2024-12-05 06:37:18,759 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.7 pTM=0.481 ipTM=0.163 tol=5.58
2024-12-05 06:37:52,277 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.9 pTM=0.478 ipTM=0.157 tol=2.1
2024-12-05 06:38:25,773 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.5 pTM=0.48 ipTM=0.16 tol=1.83
2024-12-05 06:38:59,297 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.7 pTM=0.481 ipTM=0.158 tol=1.3
2024-12-05 06:39:32,811 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.9 pTM=0.482 ipTM=0.159 tol=1.61
2024-12-05 06:40:06,284 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.8 pTM=0.482 ipTM=0.158 tol=1.16
2024-12-05 06:40:39,764 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.8 pTM=0.483 ipTM=0.157 tol=2.52
2024-12-05 06:41:13,223 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.7 pTM=0.482 ipTM=0.159 tol=1
2024-12-05 06:41:46,693 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.6 pTM=0.48 ipTM=0.157 tol=1.28
2024-12-05 06:42:20,154 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.6 pTM=0.481 ipTM=0.157 tol=0.741
2024-12-05 06:42:53,603 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.5 pTM=0.484 ipTM=0.164 tol=2.79
2024-12-05 06:43:27,042 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.6 pTM=0.481 ipTM=0.16 tol=2.27
2024-12-05 06:44:00,488 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.4 pTM=0.486 ipTM=0.168 tol=3.5
2024-12-05 06:44:33,984 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.4 pTM=0.481 ipTM=0.154 tol=2.27
2024-12-05 06:45:07,471 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.4 pTM=0.481 ipTM=0.158 tol=1.92
2024-12-05 06:45:40,945 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.9 pTM=0.483 ipTM=0.156 tol=0.778
2024-12-05 06:46:14,433 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.5 pTM=0.482 ipTM=0.158 tol=1.27
2024-12-05 06:46:47,896 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.7 pTM=0.483 ipTM=0.157 tol=1.75
2024-12-05 06:47:21,393 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.7 pTM=0.482 ipTM=0.157 tol=1.25
2024-12-05 06:47:54,841 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.4 pTM=0.483 ipTM=0.158 tol=1.26
2024-12-05 06:48:28,265 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.6 pTM=0.485 ipTM=0.161 tol=1.27
2024-12-05 06:49:01,681 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.4 pTM=0.481 ipTM=0.157 tol=1.89
2024-12-05 06:49:35,116 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.6 pTM=0.483 ipTM=0.157 tol=2.37
2024-12-05 06:50:08,545 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.8 pTM=0.48 ipTM=0.157 tol=1.87
2024-12-05 06:50:41,944 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.6 pTM=0.483 ipTM=0.157 tol=1.52
2024-12-05 06:51:15,360 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.6 pTM=0.482 ipTM=0.156 tol=2.38
2024-12-05 06:51:48,773 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.4 pTM=0.481 ipTM=0.154 tol=2.23
2024-12-05 06:52:22,184 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.9 pTM=0.481 ipTM=0.156 tol=1.56
2024-12-05 06:52:55,640 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.8 pTM=0.482 ipTM=0.157 tol=1.76
2024-12-05 06:52:55,641 alphafold2_multimer_v3_model_4_seed_000 took 1037.3s (30 recycles)
2024-12-05 06:53:29,808 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.4 pTM=0.453 ipTM=0.168
2024-12-05 06:54:03,250 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.8 pTM=0.467 ipTM=0.162 tol=5.13
2024-12-05 06:54:36,733 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.6 pTM=0.472 ipTM=0.174 tol=2.78
2024-12-05 06:55:10,226 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.8 pTM=0.47 ipTM=0.181 tol=1.58
2024-12-05 06:55:43,722 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.1 pTM=0.479 ipTM=0.22 tol=1.42
2024-12-05 06:56:17,184 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.3 pTM=0.482 ipTM=0.231 tol=1.69
2024-12-05 06:56:50,644 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.8 pTM=0.478 ipTM=0.213 tol=1.48
2024-12-05 06:57:24,082 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.7 pTM=0.484 ipTM=0.267 tol=1.58
2024-12-05 06:57:57,550 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.9 pTM=0.489 ipTM=0.281 tol=1.07
2024-12-05 06:58:31,011 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.4 pTM=0.48 ipTM=0.239 tol=0.679
2024-12-05 06:59:04,452 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.7 pTM=0.486 ipTM=0.276 tol=1.3
2024-12-05 06:59:37,896 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.6 pTM=0.485 ipTM=0.269 tol=1.04
2024-12-05 07:00:11,353 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.4 pTM=0.475 ipTM=0.21 tol=1.78
2024-12-05 07:00:44,774 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.9 pTM=0.484 ipTM=0.267 tol=2.28
2024-12-05 07:01:18,197 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.6 pTM=0.481 ipTM=0.232 tol=0.96
2024-12-05 07:01:51,623 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.4 pTM=0.477 ipTM=0.224 tol=0.877
2024-12-05 07:02:25,075 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.2 pTM=0.474 ipTM=0.198 tol=1.18
2024-12-05 07:02:58,580 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.3 pTM=0.473 ipTM=0.187 tol=1.23
2024-12-05 07:03:32,087 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.2 pTM=0.478 ipTM=0.21 tol=1.14
2024-12-05 07:04:05,572 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.4 pTM=0.48 ipTM=0.24 tol=1.63
2024-12-05 07:04:39,039 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.8 pTM=0.486 ipTM=0.265 tol=1.31
2024-12-05 07:05:12,499 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.4 pTM=0.48 ipTM=0.226 tol=0.964
2024-12-05 07:05:45,961 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.4 pTM=0.477 ipTM=0.229 tol=0.722
2024-12-05 07:06:19,419 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.2 pTM=0.475 ipTM=0.222 tol=0.933
2024-12-05 07:06:52,881 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.4 pTM=0.477 ipTM=0.215 tol=0.946
2024-12-05 07:07:26,320 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.4 pTM=0.476 ipTM=0.226 tol=1.3
2024-12-05 07:07:59,741 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.5 pTM=0.482 ipTM=0.246 tol=0.853
2024-12-05 07:08:33,174 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.9 pTM=0.486 ipTM=0.261 tol=1.09
2024-12-05 07:09:06,573 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.6 pTM=0.485 ipTM=0.271 tol=2.04
2024-12-05 07:09:39,998 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.7 pTM=0.483 ipTM=0.253 tol=2.38
2024-12-05 07:10:13,406 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.8 pTM=0.48 ipTM=0.24 tol=0.772
2024-12-05 07:10:13,407 alphafold2_multimer_v3_model_5_seed_000 took 1036.9s (30 recycles)
2024-12-05 07:10:14,249 reranking models by 'multimer' metric
2024-12-05 07:10:17,724 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 07:11:09,569 Relaxation took 55.3s
2024-12-05 07:11:09,569 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.8 pTM=0.48 ipTM=0.24
2024-12-05 07:13:21,869 Relaxation took 132.3s
2024-12-05 07:13:21,869 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.9 pTM=0.475 ipTM=0.183
2024-12-05 07:15:03,587 Relaxation took 101.7s
2024-12-05 07:15:03,587 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.2 pTM=0.483 ipTM=0.158
2024-12-05 07:16:32,547 Relaxation took 89.0s
2024-12-05 07:16:32,547 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.8 pTM=0.482 ipTM=0.157
2024-12-05 07:18:10,582 Relaxation took 98.0s
2024-12-05 07:18:10,582 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.6 pTM=0.471 ipTM=0.156
2024-12-05 07:18:12,925 Done