2024-12-05 06:15:47,602 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 06:15:47,911 Running on GPU
2024-12-05 06:15:51,345 Found 6 citations for tools or databases
2024-12-05 06:15:51,345 Query 1/1: CDC23_BUB1B (length 1647)
2024-12-05 06:15:51,630 Sleeping for 9s. Reason: PENDING
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2024-12-05 06:18:54,577 Sleeping for 8s. Reason: RUNNING
2024-12-05 06:19:02,834 Sleeping for 8s. Reason: RUNNING
2024-12-05 06:19:11,090 Sleeping for 8s. Reason: RUNNING
2024-12-05 06:19:19,352 Sleeping for 9s. Reason: RUNNING
2024-12-05 06:19:28,615 Sleeping for 6s. Reason: RUNNING
2024-12-05 06:19:34,874 Sleeping for 7s. Reason: RUNNING
2024-12-05 06:19:42,133 Sleeping for 9s. Reason: RUNNING
2024-12-05 06:19:51,390 Sleeping for 7s. Reason: RUNNING
2024-12-05 06:20:00,071 Sleeping for 9s. Reason: PENDING
2024-12-05 06:20:09,323 Sleeping for 10s. Reason: RUNNING
2024-12-05 06:20:19,580 Sleeping for 9s. Reason: RUNNING
2024-12-05 06:20:28,846 Sleeping for 6s. Reason: RUNNING
2024-12-05 06:20:35,103 Sleeping for 5s. Reason: RUNNING
2024-12-05 06:20:40,353 Sleeping for 6s. Reason: RUNNING
2024-12-05 06:20:46,604 Sleeping for 8s. Reason: RUNNING
2024-12-05 06:20:54,864 Sleeping for 7s. Reason: RUNNING
2024-12-05 06:21:02,126 Sleeping for 10s. Reason: RUNNING
2024-12-05 06:21:12,386 Sleeping for 5s. Reason: RUNNING
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2024-12-05 06:21:22,903 Sleeping for 6s. Reason: RUNNING
2024-12-05 06:21:29,159 Sleeping for 7s. Reason: RUNNING
2024-12-05 06:21:36,412 Sleeping for 10s. Reason: RUNNING
2024-12-05 06:21:46,668 Sleeping for 7s. Reason: RUNNING
2024-12-05 06:21:53,932 Sleeping for 9s. Reason: RUNNING
2024-12-05 06:22:03,190 Sleeping for 8s. Reason: RUNNING
2024-12-05 06:22:11,449 Sleeping for 10s. Reason: RUNNING
2024-12-05 06:22:24,353 Setting max_seq=508, max_extra_seq=2048
2024-12-05 06:26:36,093 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.7 pTM=0.417 ipTM=0.237
2024-12-05 06:28:01,863 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60 pTM=0.434 ipTM=0.362 tol=9.7
2024-12-05 06:29:27,625 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.3 pTM=0.44 ipTM=0.396 tol=4.68
2024-12-05 06:30:53,409 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.9 pTM=0.44 ipTM=0.366 tol=3.08
2024-12-05 06:32:19,198 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.1 pTM=0.443 ipTM=0.411 tol=2.49
2024-12-05 06:33:44,959 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.4 pTM=0.444 ipTM=0.43 tol=2.72
2024-12-05 06:35:10,684 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.1 pTM=0.44 ipTM=0.42 tol=2.12
2024-12-05 06:36:36,426 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60.1 pTM=0.439 ipTM=0.394 tol=2.08
2024-12-05 06:38:02,160 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.2 pTM=0.44 ipTM=0.362 tol=7.29
2024-12-05 06:39:27,868 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.3 pTM=0.444 ipTM=0.43 tol=3.43
2024-12-05 06:40:53,615 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60 pTM=0.441 ipTM=0.389 tol=3.85
2024-12-05 06:42:19,333 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59 pTM=0.442 ipTM=0.399 tol=13.2
2024-12-05 06:43:45,068 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.9 pTM=0.441 ipTM=0.384 tol=4.82
2024-12-05 06:45:10,779 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.1 pTM=0.441 ipTM=0.404 tol=3.01
2024-12-05 06:46:36,485 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.4 pTM=0.442 ipTM=0.369 tol=3.24
2024-12-05 06:48:02,194 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60 pTM=0.44 ipTM=0.381 tol=2.36
2024-12-05 06:49:27,918 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.2 pTM=0.44 ipTM=0.384 tol=2.06
2024-12-05 06:50:53,642 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.1 pTM=0.438 ipTM=0.366 tol=1.57
2024-12-05 06:52:19,387 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60 pTM=0.437 ipTM=0.372 tol=2.59
2024-12-05 06:53:45,132 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.2 pTM=0.438 ipTM=0.378 tol=2.89
2024-12-05 06:55:10,894 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.3 pTM=0.438 ipTM=0.398 tol=2.47
2024-12-05 06:56:36,644 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.9 pTM=0.436 ipTM=0.358 tol=1.67
2024-12-05 06:58:02,376 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.1 pTM=0.44 ipTM=0.381 tol=2.3
2024-12-05 06:59:28,127 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.2 pTM=0.439 ipTM=0.426 tol=2.92
2024-12-05 07:00:53,874 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60 pTM=0.438 ipTM=0.39 tol=2.87
2024-12-05 07:02:19,596 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.8 pTM=0.438 ipTM=0.362 tol=2
2024-12-05 07:03:45,336 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60 pTM=0.441 ipTM=0.396 tol=1.61
2024-12-05 07:05:11,059 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.7 pTM=0.441 ipTM=0.378 tol=2.22
2024-12-05 07:06:36,768 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.8 pTM=0.44 ipTM=0.385 tol=2.73
2024-12-05 07:08:02,462 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.1 pTM=0.441 ipTM=0.359 tol=2.45
2024-12-05 07:09:28,195 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.8 pTM=0.437 ipTM=0.368 tol=2.3
2024-12-05 07:09:28,197 alphafold2_multimer_v3_model_1_seed_000 took 2818.6s (30 recycles)
2024-12-05 07:10:55,939 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.6 pTM=0.415 ipTM=0.238
2024-12-05 07:12:22,056 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.2 pTM=0.407 ipTM=0.202 tol=9.4
2024-12-05 07:13:48,210 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.9 pTM=0.406 ipTM=0.203 tol=7.49
2024-12-05 07:15:14,394 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.7 pTM=0.405 ipTM=0.199 tol=7.46
2024-12-05 07:16:40,579 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62 pTM=0.407 ipTM=0.195 tol=4.97
2024-12-05 07:18:06,742 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.9 pTM=0.407 ipTM=0.197 tol=7.98
2024-12-05 07:19:32,907 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.2 pTM=0.407 ipTM=0.196 tol=3.25
2024-12-05 07:20:59,057 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.4 pTM=0.41 ipTM=0.198 tol=3.69
2024-12-05 07:22:25,200 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.4 pTM=0.41 ipTM=0.198 tol=4.39
2024-12-05 07:23:51,362 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.6 pTM=0.413 ipTM=0.206 tol=6.3
2024-12-05 07:25:17,530 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.5 pTM=0.409 ipTM=0.195 tol=5.34
2024-12-05 07:26:43,682 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.5 pTM=0.408 ipTM=0.199 tol=4.95
2024-12-05 07:28:09,827 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.7 pTM=0.41 ipTM=0.202 tol=4.91
2024-12-05 07:29:35,937 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.9 pTM=0.413 ipTM=0.205 tol=5.18
2024-12-05 07:31:02,046 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.8 pTM=0.413 ipTM=0.208 tol=3.43
2024-12-05 07:32:28,125 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63 pTM=0.412 ipTM=0.215 tol=4.07
2024-12-05 07:33:54,227 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.9 pTM=0.41 ipTM=0.224 tol=9.04
2024-12-05 07:35:20,333 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.5 pTM=0.41 ipTM=0.255 tol=9.37
2024-12-05 07:36:46,397 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.6 pTM=0.416 ipTM=0.283 tol=12.1
2024-12-05 07:38:12,452 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.4 pTM=0.417 ipTM=0.285 tol=10.4
2024-12-05 07:39:38,507 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.4 pTM=0.421 ipTM=0.296 tol=7.67
2024-12-05 07:41:04,598 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.2 pTM=0.422 ipTM=0.319 tol=11.4
2024-12-05 07:42:30,669 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.2 pTM=0.418 ipTM=0.288 tol=5.77
2024-12-05 07:43:56,727 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.1 pTM=0.423 ipTM=0.323 tol=7.84
2024-12-05 07:45:22,803 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.3 pTM=0.417 ipTM=0.287 tol=5.73
2024-12-05 07:46:48,862 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.1 pTM=0.426 ipTM=0.331 tol=10.8
2024-12-05 07:48:14,911 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.3 pTM=0.42 ipTM=0.275 tol=8.88
2024-12-05 07:49:40,911 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.9 pTM=0.427 ipTM=0.332 tol=9.61
2024-12-05 07:51:06,911 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.1 pTM=0.419 ipTM=0.284 tol=6.62
2024-12-05 07:52:32,876 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.2 pTM=0.428 ipTM=0.328 tol=5.61
2024-12-05 07:53:58,854 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.5 pTM=0.419 ipTM=0.276 tol=6.37
2024-12-05 07:53:58,856 alphafold2_multimer_v3_model_2_seed_000 took 2669.0s (30 recycles)
2024-12-05 07:55:26,676 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.1 pTM=0.405 ipTM=0.223
2024-12-05 07:56:52,841 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.3 pTM=0.406 ipTM=0.189 tol=14.4
2024-12-05 07:58:18,970 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.5 pTM=0.414 ipTM=0.247 tol=10.8
2024-12-05 07:59:45,158 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60 pTM=0.405 ipTM=0.248 tol=16.8
2024-12-05 08:01:11,335 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.2 pTM=0.414 ipTM=0.261 tol=13.1
2024-12-05 08:02:37,493 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.1 pTM=0.41 ipTM=0.263 tol=13.9
2024-12-05 08:04:03,590 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.4 pTM=0.418 ipTM=0.289 tol=12.8
2024-12-05 08:05:29,757 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60 pTM=0.413 ipTM=0.307 tol=14.3
2024-12-05 08:06:55,821 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.6 pTM=0.414 ipTM=0.299 tol=12.6
2024-12-05 08:08:21,909 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.8 pTM=0.416 ipTM=0.314 tol=13.3
2024-12-05 08:09:47,947 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.5 pTM=0.415 ipTM=0.311 tol=10.3
2024-12-05 08:11:14,030 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.8 pTM=0.414 ipTM=0.288 tol=11.4
2024-12-05 08:12:40,132 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60 pTM=0.413 ipTM=0.29 tol=6.03
2024-12-05 08:14:06,147 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.2 pTM=0.417 ipTM=0.304 tol=4.29
2024-12-05 08:15:32,156 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.4 pTM=0.417 ipTM=0.298 tol=5.53
2024-12-05 08:16:58,162 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.4 pTM=0.417 ipTM=0.294 tol=4.46
2024-12-05 08:18:24,196 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.4 pTM=0.417 ipTM=0.291 tol=9.55
2024-12-05 08:19:50,246 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.3 pTM=0.416 ipTM=0.293 tol=6.19
2024-12-05 08:21:16,277 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.4 pTM=0.416 ipTM=0.285 tol=6.16
2024-12-05 08:22:42,297 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.3 pTM=0.417 ipTM=0.298 tol=6.76
2024-12-05 08:24:08,336 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.5 pTM=0.417 ipTM=0.282 tol=3.1
2024-12-05 08:25:34,334 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.4 pTM=0.418 ipTM=0.311 tol=4.79
2024-12-05 08:27:00,377 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.5 pTM=0.416 ipTM=0.302 tol=3.44
2024-12-05 08:28:26,435 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.4 pTM=0.418 ipTM=0.312 tol=4.83
2024-12-05 08:29:52,486 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.4 pTM=0.416 ipTM=0.32 tol=2.24
2024-12-05 08:31:18,509 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.4 pTM=0.416 ipTM=0.303 tol=3.92
2024-12-05 08:32:44,567 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.2 pTM=0.414 ipTM=0.292 tol=2.74
2024-12-05 08:34:10,591 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.3 pTM=0.416 ipTM=0.318 tol=2.81
2024-12-05 08:35:36,633 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.4 pTM=0.418 ipTM=0.305 tol=2.85
2024-12-05 08:37:02,658 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.4 pTM=0.419 ipTM=0.309 tol=2.99
2024-12-05 08:38:28,713 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.5 pTM=0.417 ipTM=0.3 tol=2.92
2024-12-05 08:38:28,715 alphafold2_multimer_v3_model_3_seed_000 took 2668.2s (30 recycles)
2024-12-05 08:39:56,428 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.2 pTM=0.392 ipTM=0.211
2024-12-05 08:41:22,636 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.1 pTM=0.389 ipTM=0.209 tol=14.2
2024-12-05 08:42:48,883 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.6 pTM=0.392 ipTM=0.207 tol=10.9
2024-12-05 08:44:15,126 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.4 pTM=0.393 ipTM=0.206 tol=9.1
2024-12-05 08:45:41,322 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.2 pTM=0.393 ipTM=0.205 tol=7.77
2024-12-05 08:47:07,518 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58.6 pTM=0.396 ipTM=0.206 tol=6.23
2024-12-05 08:48:33,686 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58.6 pTM=0.399 ipTM=0.207 tol=8.09
2024-12-05 08:49:59,833 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.3 pTM=0.401 ipTM=0.216 tol=4.68
2024-12-05 08:51:25,970 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59 pTM=0.402 ipTM=0.213 tol=4.64
2024-12-05 08:52:52,086 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.9 pTM=0.4 ipTM=0.214 tol=4.41
2024-12-05 08:54:18,224 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.9 pTM=0.401 ipTM=0.214 tol=5.26
2024-12-05 08:55:44,313 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.6 pTM=0.399 ipTM=0.212 tol=4.41
2024-12-05 08:57:10,424 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.2 pTM=0.4 ipTM=0.21 tol=4.54
2024-12-05 08:58:36,562 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.3 pTM=0.402 ipTM=0.209 tol=3.53
2024-12-05 09:00:02,717 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.3 pTM=0.403 ipTM=0.21 tol=6
2024-12-05 09:01:28,878 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.3 pTM=0.401 ipTM=0.212 tol=6.77
2024-12-05 09:02:55,121 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.2 pTM=0.399 ipTM=0.209 tol=4.04
2024-12-05 09:04:21,302 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.1 pTM=0.401 ipTM=0.21 tol=6.01
2024-12-05 09:05:47,493 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59 pTM=0.399 ipTM=0.208 tol=6.45
2024-12-05 09:07:13,722 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.1 pTM=0.4 ipTM=0.209 tol=3.85
2024-12-05 09:08:39,878 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59 pTM=0.399 ipTM=0.207 tol=5.34
2024-12-05 09:10:06,060 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.1 pTM=0.396 ipTM=0.208 tol=6.34
2024-12-05 09:11:32,233 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.2 pTM=0.4 ipTM=0.206 tol=5.02
2024-12-05 09:12:58,397 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.2 pTM=0.398 ipTM=0.206 tol=4.92
2024-12-05 09:14:24,589 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59 pTM=0.399 ipTM=0.207 tol=4.45
2024-12-05 09:15:50,795 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.2 pTM=0.399 ipTM=0.208 tol=3.68
2024-12-05 09:17:16,994 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.2 pTM=0.399 ipTM=0.206 tol=4.11
2024-12-05 09:18:43,175 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59 pTM=0.397 ipTM=0.208 tol=5.93
2024-12-05 09:20:09,380 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.9 pTM=0.397 ipTM=0.208 tol=6.54
2024-12-05 09:21:35,569 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.1 pTM=0.396 ipTM=0.206 tol=3.96
2024-12-05 09:23:01,737 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.1 pTM=0.399 ipTM=0.207 tol=3.16
2024-12-05 09:23:01,738 alphafold2_multimer_v3_model_4_seed_000 took 2671.4s (30 recycles)
2024-12-05 09:24:29,592 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59 pTM=0.406 ipTM=0.203
2024-12-05 09:25:55,879 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.2 pTM=0.409 ipTM=0.199 tol=17.2
2024-12-05 09:27:22,176 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.6 pTM=0.411 ipTM=0.197 tol=12.4
2024-12-05 09:28:48,378 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.1 pTM=0.418 ipTM=0.217 tol=13.4
2024-12-05 09:30:14,588 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.5 pTM=0.416 ipTM=0.205 tol=10.1
2024-12-05 09:31:40,783 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.7 pTM=0.416 ipTM=0.205 tol=5.46
2024-12-05 09:33:06,967 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.6 pTM=0.415 ipTM=0.199 tol=7.6
2024-12-05 09:34:33,147 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.8 pTM=0.413 ipTM=0.198 tol=6.35
2024-12-05 09:35:59,321 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60.8 pTM=0.412 ipTM=0.195 tol=6.24
2024-12-05 09:37:25,476 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.9 pTM=0.414 ipTM=0.195 tol=7.3
2024-12-05 09:38:51,696 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.9 pTM=0.414 ipTM=0.189 tol=5.51
2024-12-05 09:40:17,890 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60.9 pTM=0.413 ipTM=0.19 tol=3.68
2024-12-05 09:41:44,104 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.9 pTM=0.412 ipTM=0.191 tol=6.01
2024-12-05 09:43:10,334 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.1 pTM=0.414 ipTM=0.191 tol=5.52
2024-12-05 09:44:36,575 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61 pTM=0.414 ipTM=0.195 tol=6.11
2024-12-05 09:46:02,756 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.9 pTM=0.411 ipTM=0.193 tol=6.12
2024-12-05 09:47:28,959 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61 pTM=0.414 ipTM=0.192 tol=4.38
2024-12-05 09:48:55,162 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61 pTM=0.412 ipTM=0.189 tol=6.15
2024-12-05 09:50:21,358 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60.9 pTM=0.412 ipTM=0.186 tol=4.13
2024-12-05 09:51:47,539 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.1 pTM=0.412 ipTM=0.186 tol=5.73
2024-12-05 09:53:13,735 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61 pTM=0.412 ipTM=0.186 tol=4.29
2024-12-05 09:54:39,941 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61 pTM=0.412 ipTM=0.19 tol=5.83
2024-12-05 09:56:06,168 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61 pTM=0.412 ipTM=0.19 tol=3.4
2024-12-05 09:57:32,360 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61 pTM=0.413 ipTM=0.19 tol=4.09
2024-12-05 09:58:58,537 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61 pTM=0.414 ipTM=0.191 tol=6.77
2024-12-05 10:00:24,721 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61 pTM=0.414 ipTM=0.193 tol=8.55
2024-12-05 10:01:50,917 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61 pTM=0.413 ipTM=0.189 tol=3.8
2024-12-05 10:03:17,102 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.2 pTM=0.415 ipTM=0.193 tol=4.8
2024-12-05 10:04:43,278 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.3 pTM=0.413 ipTM=0.191 tol=6.32
2024-12-05 10:06:09,430 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.5 pTM=0.412 ipTM=0.191 tol=6.06
2024-12-05 10:07:35,569 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.7 pTM=0.412 ipTM=0.195 tol=8.7
2024-12-05 10:07:35,570 alphafold2_multimer_v3_model_5_seed_000 took 2672.2s (30 recycles)
2024-12-05 10:07:37,166 reranking models by 'multimer' metric
2024-12-05 10:07:38,904 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 10:11:03,255 Relaxation took 206.1s
2024-12-05 10:11:03,255 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.8 pTM=0.437 ipTM=0.368
2024-12-05 10:15:11,890 Relaxation took 248.6s
2024-12-05 10:15:11,890 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.5 pTM=0.417 ipTM=0.3
2024-12-05 10:19:10,406 Relaxation took 238.5s
2024-12-05 10:19:10,406 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.5 pTM=0.419 ipTM=0.276
2024-12-05 10:21:41,648 Relaxation took 151.2s
2024-12-05 10:21:41,648 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.1 pTM=0.399 ipTM=0.207
2024-12-05 10:24:58,554 Relaxation took 196.9s
2024-12-05 10:24:58,554 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.7 pTM=0.412 ipTM=0.195
2024-12-05 10:25:02,338 Done