2024-12-05 07:11:51,298 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 07:11:51,605 Running on GPU
2024-12-05 07:11:55,241 Found 6 citations for tools or databases
2024-12-05 07:11:55,242 Query 1/1: CDCA3_CDK5R1 (length 575)
2024-12-05 07:11:55,535 Sleeping for 5s. Reason: PENDING
2024-12-05 07:12:00,792 Sleeping for 10s. Reason: RUNNING
2024-12-05 07:12:11,066 Sleeping for 6s. Reason: RUNNING
2024-12-05 07:12:17,321 Sleeping for 5s. Reason: RUNNING
2024-12-05 07:12:22,577 Sleeping for 9s. Reason: RUNNING
2024-12-05 07:12:31,836 Sleeping for 8s. Reason: RUNNING
2024-12-05 07:12:41,094 Sleeping for 7s. Reason: PENDING
2024-12-05 07:12:48,355 Sleeping for 7s. Reason: RUNNING
2024-12-05 07:12:55,613 Sleeping for 8s. Reason: RUNNING
2024-12-05 07:13:03,868 Sleeping for 7s. Reason: RUNNING
2024-12-05 07:13:12,422 Setting max_seq=508, max_extra_seq=2048
2024-12-05 07:15:55,739 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=40.2 pTM=0.385 ipTM=0.298
2024-12-05 07:16:02,551 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=39.7 pTM=0.374 ipTM=0.297 tol=15.5
2024-12-05 07:16:09,387 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=42.4 pTM=0.391 ipTM=0.394 tol=15.3
2024-12-05 07:16:16,215 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=41.6 pTM=0.372 ipTM=0.37 tol=5.28
2024-12-05 07:16:23,072 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=41.7 pTM=0.368 ipTM=0.282 tol=5.26
2024-12-05 07:16:29,936 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=41.3 pTM=0.378 ipTM=0.272 tol=7.15
2024-12-05 07:16:36,801 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=41.1 pTM=0.371 ipTM=0.336 tol=5.44
2024-12-05 07:16:43,659 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41.3 pTM=0.378 ipTM=0.318 tol=7.35
2024-12-05 07:16:50,526 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=42.2 pTM=0.382 ipTM=0.307 tol=11
2024-12-05 07:16:57,406 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=41 pTM=0.371 ipTM=0.294 tol=13.3
2024-12-05 07:17:04,287 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=40.4 pTM=0.368 ipTM=0.301 tol=6.98
2024-12-05 07:17:11,167 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=41 pTM=0.375 ipTM=0.291 tol=8.46
2024-12-05 07:17:18,047 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=40.8 pTM=0.371 ipTM=0.285 tol=5.46
2024-12-05 07:17:24,933 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=41.5 pTM=0.381 ipTM=0.317 tol=4.75
2024-12-05 07:17:31,826 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=41 pTM=0.371 ipTM=0.307 tol=4.92
2024-12-05 07:17:38,711 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=41.5 pTM=0.378 ipTM=0.314 tol=3.08
2024-12-05 07:17:45,607 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=41.5 pTM=0.376 ipTM=0.322 tol=2.3
2024-12-05 07:17:52,496 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=41.3 pTM=0.378 ipTM=0.31 tol=2.11
2024-12-05 07:17:59,388 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=40.8 pTM=0.371 ipTM=0.267 tol=2.34
2024-12-05 07:18:06,275 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=41.1 pTM=0.385 ipTM=0.29 tol=3.55
2024-12-05 07:18:13,172 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=41.1 pTM=0.375 ipTM=0.288 tol=2.76
2024-12-05 07:18:20,061 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=41.2 pTM=0.379 ipTM=0.269 tol=2.51
2024-12-05 07:18:26,952 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=41 pTM=0.373 ipTM=0.263 tol=2.51
2024-12-05 07:18:33,849 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=41.7 pTM=0.386 ipTM=0.346 tol=2.61
2024-12-05 07:18:40,740 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=41.1 pTM=0.373 ipTM=0.268 tol=3.26
2024-12-05 07:18:47,638 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=41.4 pTM=0.384 ipTM=0.267 tol=3.48
2024-12-05 07:18:54,539 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=41.3 pTM=0.377 ipTM=0.316 tol=2.05
2024-12-05 07:19:01,442 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=41.7 pTM=0.383 ipTM=0.305 tol=2.06
2024-12-05 07:19:08,338 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=41.4 pTM=0.378 ipTM=0.293 tol=1.46
2024-12-05 07:19:15,237 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=41.9 pTM=0.386 ipTM=0.316 tol=1.54
2024-12-05 07:19:22,139 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=41.3 pTM=0.378 ipTM=0.296 tol=2.18
2024-12-05 07:19:22,140 alphafold2_multimer_v3_model_1_seed_000 took 364.3s (30 recycles)
2024-12-05 07:19:29,264 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=40.5 pTM=0.359 ipTM=0.126
2024-12-05 07:19:36,164 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=41 pTM=0.354 ipTM=0.137 tol=15
2024-12-05 07:19:43,068 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.4 pTM=0.354 ipTM=0.126 tol=9.8
2024-12-05 07:19:49,980 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=41.4 pTM=0.354 ipTM=0.132 tol=4.84
2024-12-05 07:19:56,894 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=41.4 pTM=0.355 ipTM=0.137 tol=9.02
2024-12-05 07:20:03,832 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=41.5 pTM=0.354 ipTM=0.135 tol=3.84
2024-12-05 07:20:10,749 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=41.2 pTM=0.355 ipTM=0.138 tol=6.52
2024-12-05 07:20:17,659 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=41.2 pTM=0.356 ipTM=0.137 tol=3.8
2024-12-05 07:20:24,576 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=41.3 pTM=0.357 ipTM=0.139 tol=6.46
2024-12-05 07:20:31,495 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=41.3 pTM=0.356 ipTM=0.14 tol=3.84
2024-12-05 07:20:38,423 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=41.4 pTM=0.357 ipTM=0.142 tol=2.71
2024-12-05 07:20:45,340 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=41.3 pTM=0.357 ipTM=0.135 tol=2.97
2024-12-05 07:20:52,255 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=41.2 pTM=0.358 ipTM=0.138 tol=3.16
2024-12-05 07:20:59,172 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41.3 pTM=0.355 ipTM=0.132 tol=2.77
2024-12-05 07:21:06,091 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=41.4 pTM=0.357 ipTM=0.135 tol=3.24
2024-12-05 07:21:13,013 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41.3 pTM=0.356 ipTM=0.133 tol=2.47
2024-12-05 07:21:19,935 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=41.4 pTM=0.358 ipTM=0.138 tol=2.5
2024-12-05 07:21:26,857 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=41.3 pTM=0.358 ipTM=0.132 tol=2.42
2024-12-05 07:21:33,776 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=41.3 pTM=0.358 ipTM=0.138 tol=2.78
2024-12-05 07:21:40,698 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=41.3 pTM=0.356 ipTM=0.135 tol=3.75
2024-12-05 07:21:47,617 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.3 pTM=0.356 ipTM=0.133 tol=2.95
2024-12-05 07:21:54,537 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=41.4 pTM=0.356 ipTM=0.133 tol=3.1
2024-12-05 07:22:01,461 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=41.3 pTM=0.357 ipTM=0.138 tol=3.13
2024-12-05 07:22:08,384 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=41.4 pTM=0.358 ipTM=0.137 tol=2.57
2024-12-05 07:22:15,305 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=41.3 pTM=0.356 ipTM=0.137 tol=2.5
2024-12-05 07:22:22,227 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=41.3 pTM=0.358 ipTM=0.14 tol=2.66
2024-12-05 07:22:29,152 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=41.3 pTM=0.357 ipTM=0.138 tol=2.88
2024-12-05 07:22:36,077 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=41.3 pTM=0.357 ipTM=0.142 tol=3.7
2024-12-05 07:22:43,004 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=41.3 pTM=0.357 ipTM=0.142 tol=3.83
2024-12-05 07:22:49,931 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=41.4 pTM=0.356 ipTM=0.138 tol=3.7
2024-12-05 07:22:56,849 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=41.2 pTM=0.358 ipTM=0.138 tol=4.6
2024-12-05 07:22:56,850 alphafold2_multimer_v3_model_2_seed_000 took 214.5s (30 recycles)
2024-12-05 07:23:03,999 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=39.8 pTM=0.366 ipTM=0.207
2024-12-05 07:23:10,946 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=40.2 pTM=0.365 ipTM=0.162 tol=21.4
2024-12-05 07:23:17,905 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=40.4 pTM=0.362 ipTM=0.16 tol=13.3
2024-12-05 07:23:24,871 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=40.3 pTM=0.361 ipTM=0.172 tol=5.12
2024-12-05 07:23:31,834 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=40.4 pTM=0.358 ipTM=0.153 tol=8.12
2024-12-05 07:23:38,792 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=40.2 pTM=0.359 ipTM=0.156 tol=7.11
2024-12-05 07:23:45,749 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=40.3 pTM=0.361 ipTM=0.158 tol=4.21
2024-12-05 07:23:52,704 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=40.5 pTM=0.362 ipTM=0.173 tol=6.89
2024-12-05 07:23:59,666 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=40.4 pTM=0.358 ipTM=0.151 tol=4.38
2024-12-05 07:24:06,617 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=40.4 pTM=0.36 ipTM=0.155 tol=5.03
2024-12-05 07:24:13,573 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=40.4 pTM=0.36 ipTM=0.155 tol=3.01
2024-12-05 07:24:20,527 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=40.2 pTM=0.358 ipTM=0.156 tol=4.28
2024-12-05 07:24:27,481 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=40.2 pTM=0.357 ipTM=0.146 tol=4.38
2024-12-05 07:24:34,438 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=40.1 pTM=0.358 ipTM=0.154 tol=5.19
2024-12-05 07:24:41,388 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=40.5 pTM=0.357 ipTM=0.149 tol=4.71
2024-12-05 07:24:48,346 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=40 pTM=0.357 ipTM=0.145 tol=4.44
2024-12-05 07:24:55,297 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=40.1 pTM=0.359 ipTM=0.145 tol=4.2
2024-12-05 07:25:02,257 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=40.2 pTM=0.359 ipTM=0.145 tol=6.01
2024-12-05 07:25:09,216 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=40.5 pTM=0.356 ipTM=0.154 tol=6.11
2024-12-05 07:25:16,172 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=40 pTM=0.359 ipTM=0.148 tol=4.71
2024-12-05 07:25:23,126 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=40.5 pTM=0.359 ipTM=0.153 tol=4.8
2024-12-05 07:25:30,080 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=40.1 pTM=0.359 ipTM=0.145 tol=4.03
2024-12-05 07:25:37,040 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=40.4 pTM=0.358 ipTM=0.155 tol=3.44
2024-12-05 07:25:44,005 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=40.2 pTM=0.359 ipTM=0.147 tol=2.7
2024-12-05 07:25:50,963 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=40.4 pTM=0.357 ipTM=0.155 tol=3.04
2024-12-05 07:25:57,920 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=40.4 pTM=0.362 ipTM=0.152 tol=3.26
2024-12-05 07:26:04,874 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=40.3 pTM=0.359 ipTM=0.153 tol=3.28
2024-12-05 07:26:11,829 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=40.3 pTM=0.361 ipTM=0.156 tol=3.88
2024-12-05 07:26:18,791 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=40.3 pTM=0.358 ipTM=0.146 tol=5.88
2024-12-05 07:26:25,749 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=40.4 pTM=0.361 ipTM=0.148 tol=6.27
2024-12-05 07:26:32,709 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=40.2 pTM=0.36 ipTM=0.157 tol=5.36
2024-12-05 07:26:32,709 alphafold2_multimer_v3_model_3_seed_000 took 215.6s (30 recycles)
2024-12-05 07:26:39,844 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=41.3 pTM=0.354 ipTM=0.134
2024-12-05 07:26:46,767 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=41.8 pTM=0.357 ipTM=0.15 tol=8.76
2024-12-05 07:26:53,700 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=41.9 pTM=0.355 ipTM=0.133 tol=8.16
2024-12-05 07:27:00,641 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=42.4 pTM=0.357 ipTM=0.145 tol=5.48
2024-12-05 07:27:07,584 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=43.4 pTM=0.378 ipTM=0.421 tol=7.64
2024-12-05 07:27:14,534 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=42.8 pTM=0.365 ipTM=0.271 tol=4.63
2024-12-05 07:27:21,478 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=42.8 pTM=0.368 ipTM=0.266 tol=3.77
2024-12-05 07:27:28,444 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=42.8 pTM=0.362 ipTM=0.244 tol=7.47
2024-12-05 07:27:35,399 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=42.6 pTM=0.362 ipTM=0.207 tol=7.37
2024-12-05 07:27:42,356 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=42.3 pTM=0.357 ipTM=0.176 tol=2.93
2024-12-05 07:27:49,314 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=42.4 pTM=0.359 ipTM=0.165 tol=3.11
2024-12-05 07:27:56,275 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=42.4 pTM=0.364 ipTM=0.26 tol=5.5
2024-12-05 07:28:03,222 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=42.5 pTM=0.36 ipTM=0.192 tol=3.02
2024-12-05 07:28:10,175 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=42.5 pTM=0.362 ipTM=0.219 tol=4.24
2024-12-05 07:28:17,135 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=42.5 pTM=0.357 ipTM=0.177 tol=2.73
2024-12-05 07:28:24,094 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=42.3 pTM=0.355 ipTM=0.143 tol=3.42
2024-12-05 07:28:31,050 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=42 pTM=0.355 ipTM=0.148 tol=4.33
2024-12-05 07:28:38,010 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=42.2 pTM=0.356 ipTM=0.151 tol=4.74
2024-12-05 07:28:44,963 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=42.3 pTM=0.357 ipTM=0.19 tol=5.16
2024-12-05 07:28:51,910 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=42 pTM=0.355 ipTM=0.165 tol=5.04
2024-12-05 07:28:58,848 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=42.3 pTM=0.36 ipTM=0.163 tol=3.1
2024-12-05 07:29:05,793 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=42.2 pTM=0.356 ipTM=0.172 tol=2.54
2024-12-05 07:29:12,735 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42.3 pTM=0.365 ipTM=0.198 tol=2.72
2024-12-05 07:29:19,676 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=42.6 pTM=0.362 ipTM=0.229 tol=2.84
2024-12-05 07:29:26,618 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=42.3 pTM=0.357 ipTM=0.148 tol=4.74
2024-12-05 07:29:33,558 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=42.3 pTM=0.357 ipTM=0.145 tol=3.95
2024-12-05 07:29:40,495 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=42.2 pTM=0.355 ipTM=0.136 tol=3.17
2024-12-05 07:29:47,435 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=42.4 pTM=0.361 ipTM=0.161 tol=3.05
2024-12-05 07:29:54,375 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=42.5 pTM=0.369 ipTM=0.265 tol=5.6
2024-12-05 07:30:01,318 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=42.2 pTM=0.36 ipTM=0.191 tol=3.88
2024-12-05 07:30:08,259 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=42.2 pTM=0.353 ipTM=0.129 tol=3.84
2024-12-05 07:30:08,259 alphafold2_multimer_v3_model_4_seed_000 took 215.3s (30 recycles)
2024-12-05 07:30:15,426 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=40 pTM=0.358 ipTM=0.136
2024-12-05 07:30:22,386 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=40.9 pTM=0.352 ipTM=0.139 tol=10.7
2024-12-05 07:30:29,350 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=41.4 pTM=0.365 ipTM=0.195 tol=8.71
2024-12-05 07:30:36,309 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=40.8 pTM=0.359 ipTM=0.142 tol=5.27
2024-12-05 07:30:43,283 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=41.3 pTM=0.356 ipTM=0.136 tol=6.32
2024-12-05 07:30:50,251 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=41.2 pTM=0.363 ipTM=0.176 tol=8.62
2024-12-05 07:30:57,214 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=41 pTM=0.36 ipTM=0.144 tol=6.81
2024-12-05 07:31:04,188 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.1 pTM=0.356 ipTM=0.136 tol=4.04
2024-12-05 07:31:11,158 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=41.2 pTM=0.355 ipTM=0.134 tol=4.04
2024-12-05 07:31:18,126 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=41.3 pTM=0.356 ipTM=0.135 tol=3.41
2024-12-05 07:31:25,098 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=41.2 pTM=0.354 ipTM=0.129 tol=5.69
2024-12-05 07:31:32,068 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=41.2 pTM=0.358 ipTM=0.141 tol=5.22
2024-12-05 07:31:39,038 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=41.1 pTM=0.354 ipTM=0.131 tol=3.86
2024-12-05 07:31:46,013 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41.3 pTM=0.356 ipTM=0.136 tol=3.24
2024-12-05 07:31:52,986 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.2 pTM=0.351 ipTM=0.124 tol=6.53
2024-12-05 07:31:59,953 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=41.1 pTM=0.355 ipTM=0.134 tol=5.69
2024-12-05 07:32:06,919 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=41.1 pTM=0.354 ipTM=0.131 tol=3.34
2024-12-05 07:32:13,884 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=41.1 pTM=0.356 ipTM=0.137 tol=5.91
2024-12-05 07:32:20,854 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=41.2 pTM=0.351 ipTM=0.125 tol=2.44
2024-12-05 07:32:27,814 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=41 pTM=0.353 ipTM=0.133 tol=5.14
2024-12-05 07:32:34,781 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=41.2 pTM=0.354 ipTM=0.13 tol=4.85
2024-12-05 07:32:41,756 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=41.2 pTM=0.354 ipTM=0.132 tol=6.87
2024-12-05 07:32:48,732 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=41.1 pTM=0.354 ipTM=0.133 tol=2.42
2024-12-05 07:32:55,706 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=41.1 pTM=0.352 ipTM=0.132 tol=2.23
2024-12-05 07:33:02,679 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=40.9 pTM=0.352 ipTM=0.129 tol=2.78
2024-12-05 07:33:09,651 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=41 pTM=0.353 ipTM=0.131 tol=2.96
2024-12-05 07:33:16,621 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=41 pTM=0.353 ipTM=0.13 tol=2.75
2024-12-05 07:33:23,588 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=40.9 pTM=0.355 ipTM=0.138 tol=2.7
2024-12-05 07:33:30,561 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=40.9 pTM=0.353 ipTM=0.129 tol=9.51
2024-12-05 07:33:37,529 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=41.2 pTM=0.354 ipTM=0.131 tol=6.73
2024-12-05 07:33:44,508 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=41 pTM=0.352 ipTM=0.125 tol=8.2
2024-12-05 07:33:44,509 alphafold2_multimer_v3_model_5_seed_000 took 216.0s (30 recycles)
2024-12-05 07:33:44,728 reranking models by 'multimer' metric
2024-12-05 07:33:47,676 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 07:34:24,195 Relaxation took 39.5s
2024-12-05 07:34:24,195 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=41.3 pTM=0.378 ipTM=0.296
2024-12-05 07:37:04,188 Relaxation took 160.0s
2024-12-05 07:37:04,188 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=40.2 pTM=0.36 ipTM=0.157
2024-12-05 07:37:33,410 Relaxation took 29.2s
2024-12-05 07:37:33,410 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=41.2 pTM=0.358 ipTM=0.138
2024-12-05 07:38:01,542 Relaxation took 28.1s
2024-12-05 07:38:01,542 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=42.2 pTM=0.353 ipTM=0.129
2024-12-05 07:38:39,734 Relaxation took 38.2s
2024-12-05 07:38:39,734 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=41 pTM=0.352 ipTM=0.125
2024-12-05 07:38:40,790 Done