2024-12-05 07:14:41,099 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 07:14:41,413 Running on GPU
2024-12-05 07:14:44,949 Found 6 citations for tools or databases
2024-12-05 07:14:44,949 Query 1/1: CDCA3_CTDSP2 (length 539)
2024-12-05 07:14:45,229 Sleeping for 9s. Reason: PENDING
2024-12-05 07:14:54,642 Sleeping for 8s. Reason: RUNNING
2024-12-05 07:15:02,900 Sleeping for 8s. Reason: RUNNING
2024-12-05 07:15:11,156 Sleeping for 10s. Reason: RUNNING
2024-12-05 07:15:21,427 Sleeping for 5s. Reason: RUNNING
2024-12-05 07:15:26,680 Sleeping for 7s. Reason: RUNNING
2024-12-05 07:15:33,940 Sleeping for 8s. Reason: RUNNING
2024-12-05 07:15:43,671 Sleeping for 6s. Reason: PENDING
2024-12-05 07:15:49,930 Sleeping for 6s. Reason: RUNNING
2024-12-05 07:15:56,191 Sleeping for 8s. Reason: RUNNING
2024-12-05 07:16:04,597 Sleeping for 10s. Reason: RUNNING
2024-12-05 07:16:14,856 Sleeping for 9s. Reason: RUNNING
2024-12-05 07:16:25,850 Setting max_seq=508, max_extra_seq=2048
2024-12-05 07:19:12,063 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=43.1 pTM=0.437 ipTM=0.306
2024-12-05 07:19:19,452 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=43.4 pTM=0.428 ipTM=0.187 tol=15.5
2024-12-05 07:19:26,863 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=44.3 pTM=0.43 ipTM=0.317 tol=10.9
2024-12-05 07:19:34,278 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=45.1 pTM=0.438 ipTM=0.33 tol=8.2
2024-12-05 07:19:41,702 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=45.6 pTM=0.438 ipTM=0.248 tol=6.48
2024-12-05 07:19:49,126 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=45.3 pTM=0.44 ipTM=0.314 tol=5.57
2024-12-05 07:19:56,550 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.4 pTM=0.448 ipTM=0.308 tol=4.53
2024-12-05 07:20:03,971 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.8 pTM=0.449 ipTM=0.413 tol=5.25
2024-12-05 07:20:11,398 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.4 pTM=0.449 ipTM=0.388 tol=4.02
2024-12-05 07:20:18,821 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.6 pTM=0.466 ipTM=0.448 tol=3.11
2024-12-05 07:20:26,249 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.8 pTM=0.463 ipTM=0.528 tol=3.02
2024-12-05 07:20:33,680 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.7 pTM=0.463 ipTM=0.546 tol=2.72
2024-12-05 07:20:41,112 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49 pTM=0.459 ipTM=0.561 tol=3.35
2024-12-05 07:20:48,547 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49 pTM=0.463 ipTM=0.572 tol=2.89
2024-12-05 07:20:55,994 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.1 pTM=0.459 ipTM=0.572 tol=3.01
2024-12-05 07:21:03,434 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.5 pTM=0.47 ipTM=0.574 tol=2.8
2024-12-05 07:21:10,878 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49 pTM=0.465 ipTM=0.573 tol=4.03
2024-12-05 07:21:18,328 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.2 pTM=0.469 ipTM=0.577 tol=2.47
2024-12-05 07:21:25,766 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49 pTM=0.461 ipTM=0.57 tol=2.54
2024-12-05 07:21:33,215 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.3 pTM=0.469 ipTM=0.569 tol=2.87
2024-12-05 07:21:40,659 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49 pTM=0.464 ipTM=0.578 tol=1.85
2024-12-05 07:21:48,103 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.2 pTM=0.466 ipTM=0.571 tol=2.99
2024-12-05 07:21:55,554 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.2 pTM=0.461 ipTM=0.571 tol=1.59
2024-12-05 07:22:02,998 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.4 pTM=0.47 ipTM=0.583 tol=2.4
2024-12-05 07:22:10,452 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.9 pTM=0.463 ipTM=0.576 tol=1.8
2024-12-05 07:22:17,896 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.3 pTM=0.467 ipTM=0.585 tol=2.54
2024-12-05 07:22:25,345 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.9 pTM=0.459 ipTM=0.569 tol=1.89
2024-12-05 07:22:32,804 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.3 pTM=0.47 ipTM=0.574 tol=2.7
2024-12-05 07:22:40,250 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49 pTM=0.464 ipTM=0.575 tol=2.41
2024-12-05 07:22:47,706 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.1 pTM=0.463 ipTM=0.569 tol=2.14
2024-12-05 07:22:55,156 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.1 pTM=0.462 ipTM=0.586 tol=1.71
2024-12-05 07:22:55,156 alphafold2_multimer_v3_model_1_seed_000 took 383.9s (30 recycles)
2024-12-05 07:23:02,788 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=43.8 pTM=0.423 ipTM=0.2
2024-12-05 07:23:10,234 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.2 pTM=0.422 ipTM=0.151 tol=10.9
2024-12-05 07:23:17,699 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=44.7 pTM=0.425 ipTM=0.248 tol=15.5
2024-12-05 07:23:25,163 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=44.3 pTM=0.426 ipTM=0.188 tol=8.75
2024-12-05 07:23:32,612 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=43.9 pTM=0.423 ipTM=0.146 tol=8.64
2024-12-05 07:23:40,072 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=45.8 pTM=0.444 ipTM=0.355 tol=11.8
2024-12-05 07:23:47,543 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46 pTM=0.438 ipTM=0.419 tol=9.05
2024-12-05 07:23:55,002 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=46.4 pTM=0.445 ipTM=0.455 tol=8.66
2024-12-05 07:24:02,463 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.7 pTM=0.454 ipTM=0.517 tol=8.04
2024-12-05 07:24:09,919 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.9 pTM=0.45 ipTM=0.561 tol=7.1
2024-12-05 07:24:17,374 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.8 pTM=0.452 ipTM=0.557 tol=4.37
2024-12-05 07:24:24,832 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48 pTM=0.452 ipTM=0.578 tol=4.77
2024-12-05 07:24:32,305 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48 pTM=0.448 ipTM=0.573 tol=5.27
2024-12-05 07:24:39,764 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48 pTM=0.448 ipTM=0.571 tol=4.76
2024-12-05 07:24:47,240 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.1 pTM=0.448 ipTM=0.565 tol=2.7
2024-12-05 07:24:54,714 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.1 pTM=0.45 ipTM=0.571 tol=2.47
2024-12-05 07:25:02,195 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.9 pTM=0.45 ipTM=0.563 tol=4
2024-12-05 07:25:09,663 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.8 pTM=0.457 ipTM=0.58 tol=3.49
2024-12-05 07:25:17,152 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.6 pTM=0.454 ipTM=0.582 tol=3.14
2024-12-05 07:25:24,628 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48.1 pTM=0.447 ipTM=0.568 tol=4.4
2024-12-05 07:25:32,097 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.9 pTM=0.448 ipTM=0.569 tol=4.67
2024-12-05 07:25:39,570 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47.7 pTM=0.445 ipTM=0.568 tol=3.28
2024-12-05 07:25:47,049 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.4 pTM=0.457 ipTM=0.582 tol=6.05
2024-12-05 07:25:54,521 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.6 pTM=0.445 ipTM=0.564 tol=5.38
2024-12-05 07:26:01,980 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.2 pTM=0.451 ipTM=0.573 tol=7.13
2024-12-05 07:26:09,463 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.4 pTM=0.451 ipTM=0.583 tol=2.23
2024-12-05 07:26:16,931 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.2 pTM=0.448 ipTM=0.58 tol=2.66
2024-12-05 07:26:24,394 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.7 pTM=0.447 ipTM=0.566 tol=2.97
2024-12-05 07:26:31,859 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49.1 pTM=0.461 ipTM=0.579 tol=4.33
2024-12-05 07:26:39,331 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.8 pTM=0.456 ipTM=0.591 tol=2.21
2024-12-05 07:26:46,809 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.9 pTM=0.454 ipTM=0.584 tol=2.56
2024-12-05 07:26:46,809 alphafold2_multimer_v3_model_2_seed_000 took 231.5s (30 recycles)
2024-12-05 07:26:54,473 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=44 pTM=0.455 ipTM=0.392
2024-12-05 07:27:01,954 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=44.4 pTM=0.438 ipTM=0.18 tol=8.38
2024-12-05 07:27:09,442 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=44.7 pTM=0.435 ipTM=0.205 tol=9.11
2024-12-05 07:27:16,918 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=44.7 pTM=0.436 ipTM=0.216 tol=7.35
2024-12-05 07:27:24,410 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=44.8 pTM=0.44 ipTM=0.236 tol=11.5
2024-12-05 07:27:31,887 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=45.1 pTM=0.439 ipTM=0.251 tol=5.31
2024-12-05 07:27:39,372 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=45 pTM=0.436 ipTM=0.251 tol=4.5
2024-12-05 07:27:46,850 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45 pTM=0.443 ipTM=0.27 tol=5.33
2024-12-05 07:27:54,321 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=44.8 pTM=0.437 ipTM=0.212 tol=4.26
2024-12-05 07:28:01,811 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45.1 pTM=0.438 ipTM=0.256 tol=5.19
2024-12-05 07:28:09,282 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=44.6 pTM=0.436 ipTM=0.205 tol=6.42
2024-12-05 07:28:16,757 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=44.6 pTM=0.433 ipTM=0.229 tol=5
2024-12-05 07:28:24,238 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.6 pTM=0.457 ipTM=0.394 tol=8.88
2024-12-05 07:28:31,710 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=44.8 pTM=0.437 ipTM=0.249 tol=5.5
2024-12-05 07:28:39,191 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=45.7 pTM=0.455 ipTM=0.368 tol=5.25
2024-12-05 07:28:46,669 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=45.4 pTM=0.445 ipTM=0.278 tol=7
2024-12-05 07:28:54,142 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=45.9 pTM=0.458 ipTM=0.422 tol=10.9
2024-12-05 07:29:01,624 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45.8 pTM=0.457 ipTM=0.324 tol=3.46
2024-12-05 07:29:09,093 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47 pTM=0.469 ipTM=0.533 tol=6.15
2024-12-05 07:29:16,569 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.8 pTM=0.454 ipTM=0.316 tol=6.62
2024-12-05 07:29:24,046 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=46.2 pTM=0.457 ipTM=0.309 tol=7.85
2024-12-05 07:29:31,523 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=45.9 pTM=0.45 ipTM=0.283 tol=2.88
2024-12-05 07:29:38,999 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=45.8 pTM=0.452 ipTM=0.276 tol=10.7
2024-12-05 07:29:46,475 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=45 pTM=0.438 ipTM=0.24 tol=9.73
2024-12-05 07:29:53,959 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=45.8 pTM=0.449 ipTM=0.303 tol=5.27
2024-12-05 07:30:01,433 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=45.2 pTM=0.444 ipTM=0.269 tol=4.42
2024-12-05 07:30:08,912 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.3 pTM=0.459 ipTM=0.454 tol=2.61
2024-12-05 07:30:16,391 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46 pTM=0.456 ipTM=0.31 tol=4.84
2024-12-05 07:30:23,874 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45.8 pTM=0.446 ipTM=0.409 tol=3.76
2024-12-05 07:30:31,367 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=45.9 pTM=0.442 ipTM=0.472 tol=4.83
2024-12-05 07:30:38,846 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=46.2 pTM=0.448 ipTM=0.487 tol=7.6
2024-12-05 07:30:38,847 alphafold2_multimer_v3_model_3_seed_000 took 231.8s (30 recycles)
2024-12-05 07:30:46,495 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=44.7 pTM=0.45 ipTM=0.388
2024-12-05 07:30:53,961 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.7 pTM=0.436 ipTM=0.199 tol=14.1
2024-12-05 07:31:01,428 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44.4 pTM=0.428 ipTM=0.188 tol=12.2
2024-12-05 07:31:08,908 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=44.5 pTM=0.427 ipTM=0.16 tol=9.12
2024-12-05 07:31:16,386 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=45.1 pTM=0.426 ipTM=0.174 tol=4.64
2024-12-05 07:31:23,870 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.6 pTM=0.424 ipTM=0.16 tol=11.1
2024-12-05 07:31:31,349 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=45 pTM=0.43 ipTM=0.302 tol=13.2
2024-12-05 07:31:38,818 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=45.9 pTM=0.452 ipTM=0.327 tol=15.7
2024-12-05 07:31:46,295 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46 pTM=0.452 ipTM=0.367 tol=9.87
2024-12-05 07:31:53,756 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.7 pTM=0.468 ipTM=0.417 tol=4.5
2024-12-05 07:32:01,237 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.7 pTM=0.46 ipTM=0.51 tol=7.88
2024-12-05 07:32:08,697 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.3 pTM=0.47 ipTM=0.514 tol=7.53
2024-12-05 07:32:16,168 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.2 pTM=0.469 ipTM=0.496 tol=7.62
2024-12-05 07:32:23,638 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.8 pTM=0.47 ipTM=0.565 tol=3.62
2024-12-05 07:32:31,107 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.8 pTM=0.469 ipTM=0.582 tol=3.05
2024-12-05 07:32:38,577 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=50.7 pTM=0.502 ipTM=0.609 tol=6.2
2024-12-05 07:32:46,035 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.6 pTM=0.464 ipTM=0.574 tol=6.54
2024-12-05 07:32:53,508 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.2 pTM=0.472 ipTM=0.587 tol=6.66
2024-12-05 07:33:00,971 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.2 pTM=0.479 ipTM=0.604 tol=3.78
2024-12-05 07:33:08,437 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.5 pTM=0.48 ipTM=0.604 tol=5.46
2024-12-05 07:33:15,905 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.5 pTM=0.469 ipTM=0.603 tol=4.68
2024-12-05 07:33:23,370 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50 pTM=0.492 ipTM=0.599 tol=4.63
2024-12-05 07:33:30,843 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.6 pTM=0.468 ipTM=0.607 tol=6.86
2024-12-05 07:33:38,309 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.8 pTM=0.485 ipTM=0.613 tol=10.2
2024-12-05 07:33:45,777 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48 pTM=0.459 ipTM=0.602 tol=4.49
2024-12-05 07:33:53,248 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=50 pTM=0.494 ipTM=0.608 tol=4.18
2024-12-05 07:34:00,707 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.7 pTM=0.457 ipTM=0.588 tol=4.74
2024-12-05 07:34:08,178 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=49.8 pTM=0.493 ipTM=0.611 tol=5.87
2024-12-05 07:34:15,635 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.6 pTM=0.47 ipTM=0.6 tol=7.47
2024-12-05 07:34:23,099 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=50.5 pTM=0.493 ipTM=0.619 tol=4.6
2024-12-05 07:34:30,564 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.2 pTM=0.463 ipTM=0.606 tol=3.02
2024-12-05 07:34:30,564 alphafold2_multimer_v3_model_4_seed_000 took 231.5s (30 recycles)
2024-12-05 07:34:38,239 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=43.8 pTM=0.438 ipTM=0.244
2024-12-05 07:34:45,749 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.3 pTM=0.436 ipTM=0.208 tol=17.4
2024-12-05 07:34:53,256 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=44.4 pTM=0.431 ipTM=0.167 tol=10.6
2024-12-05 07:35:00,767 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=45.6 pTM=0.444 ipTM=0.518 tol=10.8
2024-12-05 07:35:08,290 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=45.8 pTM=0.442 ipTM=0.582 tol=6.81
2024-12-05 07:35:15,802 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.3 pTM=0.442 ipTM=0.608 tol=4.35
2024-12-05 07:35:23,313 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.2 pTM=0.44 ipTM=0.552 tol=7.14
2024-12-05 07:35:30,822 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.3 pTM=0.442 ipTM=0.597 tol=6.83
2024-12-05 07:35:38,336 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.4 pTM=0.443 ipTM=0.591 tol=4.2
2024-12-05 07:35:45,851 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.5 pTM=0.441 ipTM=0.607 tol=3.06
2024-12-05 07:35:53,367 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.6 pTM=0.439 ipTM=0.617 tol=8.68
2024-12-05 07:36:00,882 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46.5 pTM=0.442 ipTM=0.592 tol=7.61
2024-12-05 07:36:08,391 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.8 pTM=0.441 ipTM=0.622 tol=2.81
2024-12-05 07:36:15,899 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.4 pTM=0.442 ipTM=0.595 tol=5.91
2024-12-05 07:36:23,406 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.6 pTM=0.442 ipTM=0.617 tol=3.37
2024-12-05 07:36:30,910 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.7 pTM=0.445 ipTM=0.597 tol=6.32
2024-12-05 07:36:38,422 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.4 pTM=0.44 ipTM=0.605 tol=7.37
2024-12-05 07:36:45,922 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=46.5 pTM=0.441 ipTM=0.6 tol=3.41
2024-12-05 07:36:53,430 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.2 pTM=0.44 ipTM=0.599 tol=4.91
2024-12-05 07:37:00,947 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46.5 pTM=0.439 ipTM=0.606 tol=3.91
2024-12-05 07:37:08,458 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=46.4 pTM=0.44 ipTM=0.593 tol=5.25
2024-12-05 07:37:15,954 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=46.6 pTM=0.444 ipTM=0.614 tol=2.67
2024-12-05 07:37:23,463 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46.3 pTM=0.44 ipTM=0.596 tol=4.14
2024-12-05 07:37:30,986 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.2 pTM=0.443 ipTM=0.597 tol=1.68
2024-12-05 07:37:38,515 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46.3 pTM=0.437 ipTM=0.605 tol=5.16
2024-12-05 07:37:46,021 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=46.4 pTM=0.439 ipTM=0.604 tol=4.29
2024-12-05 07:37:53,545 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=46.3 pTM=0.437 ipTM=0.597 tol=4.2
2024-12-05 07:38:01,074 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=46.4 pTM=0.443 ipTM=0.598 tol=5.8
2024-12-05 07:38:08,584 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=46 pTM=0.44 ipTM=0.606 tol=6.94
2024-12-05 07:38:16,100 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46.2 pTM=0.44 ipTM=0.595 tol=6.61
2024-12-05 07:38:23,616 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=46.3 pTM=0.441 ipTM=0.59 tol=7.1
2024-12-05 07:38:23,616 alphafold2_multimer_v3_model_5_seed_000 took 232.9s (30 recycles)
2024-12-05 07:38:23,811 reranking models by 'multimer' metric
2024-12-05 07:38:24,511 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 07:38:54,522 Relaxation took 30.7s
2024-12-05 07:38:54,522 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.2 pTM=0.463 ipTM=0.606
2024-12-05 07:41:00,347 Relaxation took 125.8s
2024-12-05 07:41:00,348 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.1 pTM=0.462 ipTM=0.586
2024-12-05 07:41:34,715 Relaxation took 34.4s
2024-12-05 07:41:34,716 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=46.3 pTM=0.441 ipTM=0.59
2024-12-05 07:42:00,100 Relaxation took 25.4s
2024-12-05 07:42:00,100 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.9 pTM=0.454 ipTM=0.584
2024-12-05 07:42:28,143 Relaxation took 28.0s
2024-12-05 07:42:28,143 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=46.2 pTM=0.448 ipTM=0.487
2024-12-05 07:42:29,255 Done