2024-12-05 07:16:57,291 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 07:16:57,595 Running on GPU
2024-12-05 07:17:01,067 Found 6 citations for tools or databases
2024-12-05 07:17:01,067 Query 1/1: CDCA3_GSX1 (length 532)
2024-12-05 07:17:01,387 Sleeping for 9s. Reason: PENDING
2024-12-05 07:17:10,646 Sleeping for 5s. Reason: RUNNING
2024-12-05 07:17:15,906 Sleeping for 10s. Reason: RUNNING
2024-12-05 07:17:26,165 Sleeping for 5s. Reason: RUNNING
2024-12-05 07:17:31,417 Sleeping for 5s. Reason: RUNNING
2024-12-05 07:17:36,674 Sleeping for 6s. Reason: RUNNING
2024-12-05 07:17:42,928 Sleeping for 8s. Reason: RUNNING
2024-12-05 07:17:52,668 Sleeping for 10s. Reason: PENDING
2024-12-05 07:18:02,936 Sleeping for 10s. Reason: RUNNING
2024-12-05 07:18:13,197 Sleeping for 6s. Reason: RUNNING
2024-12-05 07:18:19,458 Sleeping for 8s. Reason: RUNNING
2024-12-05 07:18:27,715 Sleeping for 10s. Reason: RUNNING
2024-12-05 07:18:39,931 Setting max_seq=508, max_extra_seq=2048
2024-12-05 07:20:54,686 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=32.1 pTM=0.198 ipTM=0.0887
2024-12-05 07:21:00,923 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=31.1 pTM=0.204 ipTM=0.0985 tol=10.6
2024-12-05 07:21:07,149 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=31.6 pTM=0.204 ipTM=0.101 tol=5.79
2024-12-05 07:21:13,371 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=31.2 pTM=0.204 ipTM=0.104 tol=5.8
2024-12-05 07:21:19,604 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=31.2 pTM=0.205 ipTM=0.107 tol=3.8
2024-12-05 07:21:25,831 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=31.7 pTM=0.207 ipTM=0.109 tol=4.3
2024-12-05 07:21:32,065 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=31.6 pTM=0.206 ipTM=0.11 tol=2.98
2024-12-05 07:21:38,288 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=31.5 pTM=0.206 ipTM=0.109 tol=4.36
2024-12-05 07:21:44,526 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=31.7 pTM=0.207 ipTM=0.11 tol=4.7
2024-12-05 07:21:50,758 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=31.5 pTM=0.206 ipTM=0.109 tol=2.84
2024-12-05 07:21:56,993 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=31.3 pTM=0.207 ipTM=0.112 tol=3.15
2024-12-05 07:22:03,232 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=31.5 pTM=0.208 ipTM=0.111 tol=4
2024-12-05 07:22:09,490 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=31.6 pTM=0.208 ipTM=0.111 tol=2.37
2024-12-05 07:22:15,728 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=31.6 pTM=0.207 ipTM=0.112 tol=2.26
2024-12-05 07:22:21,964 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=31.4 pTM=0.207 ipTM=0.112 tol=2.05
2024-12-05 07:22:28,211 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=31.4 pTM=0.207 ipTM=0.111 tol=2.54
2024-12-05 07:22:34,466 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=31.4 pTM=0.208 ipTM=0.113 tol=4.5
2024-12-05 07:22:40,706 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=30.9 pTM=0.208 ipTM=0.114 tol=3.97
2024-12-05 07:22:46,970 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=31 pTM=0.209 ipTM=0.115 tol=3.07
2024-12-05 07:22:53,222 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=31.1 pTM=0.208 ipTM=0.112 tol=3.46
2024-12-05 07:22:59,481 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=31.3 pTM=0.208 ipTM=0.113 tol=2.84
2024-12-05 07:23:05,725 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=31.4 pTM=0.206 ipTM=0.111 tol=2.47
2024-12-05 07:23:11,988 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=31.4 pTM=0.207 ipTM=0.113 tol=2.36
2024-12-05 07:23:18,240 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=31.5 pTM=0.206 ipTM=0.112 tol=2.35
2024-12-05 07:23:24,512 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=31.5 pTM=0.206 ipTM=0.113 tol=2.12
2024-12-05 07:23:30,758 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=31.9 pTM=0.205 ipTM=0.11 tol=2.37
2024-12-05 07:23:37,016 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=31.8 pTM=0.206 ipTM=0.11 tol=2.28
2024-12-05 07:23:43,264 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=31.5 pTM=0.207 ipTM=0.113 tol=2.58
2024-12-05 07:23:49,528 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=31.6 pTM=0.208 ipTM=0.114 tol=3.26
2024-12-05 07:23:55,773 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=31.5 pTM=0.208 ipTM=0.115 tol=2.31
2024-12-05 07:24:02,043 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=31.3 pTM=0.207 ipTM=0.115 tol=2.24
2024-12-05 07:24:02,043 alphafold2_multimer_v3_model_1_seed_000 took 317.4s (30 recycles)
2024-12-05 07:24:08,489 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=32.2 pTM=0.194 ipTM=0.0854
2024-12-05 07:24:14,755 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=33.3 pTM=0.194 ipTM=0.0888 tol=18.3
2024-12-05 07:24:21,007 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=33.3 pTM=0.195 ipTM=0.0905 tol=9.59
2024-12-05 07:24:27,273 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=32.9 pTM=0.195 ipTM=0.09 tol=6.49
2024-12-05 07:24:33,552 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=33.1 pTM=0.194 ipTM=0.0887 tol=4.42
2024-12-05 07:24:39,817 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=33.5 pTM=0.195 ipTM=0.0898 tol=4.26
2024-12-05 07:24:46,107 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=33.2 pTM=0.195 ipTM=0.0896 tol=3.23
2024-12-05 07:24:52,395 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=33.4 pTM=0.195 ipTM=0.0895 tol=4.05
2024-12-05 07:24:58,677 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=33.5 pTM=0.196 ipTM=0.0902 tol=3.54
2024-12-05 07:25:04,961 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=33.4 pTM=0.195 ipTM=0.0892 tol=1.99
2024-12-05 07:25:11,234 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=33.3 pTM=0.195 ipTM=0.0898 tol=3.01
2024-12-05 07:25:17,526 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=33.4 pTM=0.195 ipTM=0.0902 tol=2.85
2024-12-05 07:25:23,812 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=33.4 pTM=0.194 ipTM=0.089 tol=3.28
2024-12-05 07:25:30,084 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=33.6 pTM=0.194 ipTM=0.0896 tol=3.11
2024-12-05 07:25:36,359 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=33.6 pTM=0.194 ipTM=0.0895 tol=2.61
2024-12-05 07:25:42,642 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=33.5 pTM=0.195 ipTM=0.0897 tol=3.5
2024-12-05 07:25:48,926 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=33.7 pTM=0.195 ipTM=0.0897 tol=3.81
2024-12-05 07:25:55,209 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=33.3 pTM=0.195 ipTM=0.0903 tol=4.32
2024-12-05 07:26:01,481 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=33.2 pTM=0.195 ipTM=0.0897 tol=3.71
2024-12-05 07:26:07,785 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=33.1 pTM=0.195 ipTM=0.0898 tol=3.47
2024-12-05 07:26:14,072 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=33.2 pTM=0.195 ipTM=0.0906 tol=3.39
2024-12-05 07:26:20,345 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=33.4 pTM=0.194 ipTM=0.0898 tol=2.78
2024-12-05 07:26:26,616 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=33.4 pTM=0.195 ipTM=0.0909 tol=3.52
2024-12-05 07:26:32,886 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=33.3 pTM=0.195 ipTM=0.0903 tol=5.47
2024-12-05 07:26:39,168 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=33.6 pTM=0.195 ipTM=0.0903 tol=4.65
2024-12-05 07:26:45,446 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=33.6 pTM=0.195 ipTM=0.0906 tol=2.18
2024-12-05 07:26:51,714 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=33.6 pTM=0.195 ipTM=0.0897 tol=3.22
2024-12-05 07:26:57,991 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=33.4 pTM=0.196 ipTM=0.0903 tol=3.19
2024-12-05 07:27:04,269 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=33.2 pTM=0.195 ipTM=0.0902 tol=2.94
2024-12-05 07:27:10,545 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=33.3 pTM=0.195 ipTM=0.0905 tol=2.55
2024-12-05 07:27:16,814 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=33.2 pTM=0.195 ipTM=0.0903 tol=3.07
2024-12-05 07:27:16,815 alphafold2_multimer_v3_model_2_seed_000 took 194.6s (30 recycles)
2024-12-05 07:27:23,330 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=31.8 pTM=0.194 ipTM=0.0795
2024-12-05 07:27:29,637 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=31.2 pTM=0.204 ipTM=0.0922 tol=15.4
2024-12-05 07:27:35,953 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=31.3 pTM=0.212 ipTM=0.103 tol=12.6
2024-12-05 07:27:42,253 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=30.6 pTM=0.215 ipTM=0.109 tol=7.39
2024-12-05 07:27:48,565 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=29.8 pTM=0.215 ipTM=0.106 tol=13.1
2024-12-05 07:27:54,869 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=31.2 pTM=0.214 ipTM=0.108 tol=12.3
2024-12-05 07:28:01,184 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=31.2 pTM=0.217 ipTM=0.112 tol=4.6
2024-12-05 07:28:07,480 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=31.3 pTM=0.217 ipTM=0.111 tol=4.85
2024-12-05 07:28:13,784 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=31.5 pTM=0.218 ipTM=0.112 tol=4.61
2024-12-05 07:28:20,077 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=31.2 pTM=0.218 ipTM=0.111 tol=4.59
2024-12-05 07:28:26,383 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=31.3 pTM=0.219 ipTM=0.114 tol=5.72
2024-12-05 07:28:32,683 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=31.4 pTM=0.217 ipTM=0.111 tol=3.63
2024-12-05 07:28:38,991 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=31.5 pTM=0.219 ipTM=0.114 tol=2.38
2024-12-05 07:28:45,289 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=31.6 pTM=0.219 ipTM=0.115 tol=3.96
2024-12-05 07:28:51,593 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=31.7 pTM=0.218 ipTM=0.113 tol=8.19
2024-12-05 07:28:57,893 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=31.7 pTM=0.218 ipTM=0.115 tol=3.47
2024-12-05 07:29:04,205 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=31.6 pTM=0.219 ipTM=0.114 tol=9.21
2024-12-05 07:29:10,500 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=31.3 pTM=0.218 ipTM=0.113 tol=9.02
2024-12-05 07:29:16,802 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=31.4 pTM=0.219 ipTM=0.116 tol=8.7
2024-12-05 07:29:23,093 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=31.5 pTM=0.219 ipTM=0.115 tol=9.83
2024-12-05 07:29:29,398 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=31.3 pTM=0.219 ipTM=0.118 tol=4.79
2024-12-05 07:29:35,694 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=31.4 pTM=0.218 ipTM=0.112 tol=8.98
2024-12-05 07:29:42,001 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=31.4 pTM=0.22 ipTM=0.118 tol=18
2024-12-05 07:29:48,302 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=31.5 pTM=0.22 ipTM=0.116 tol=4.66
2024-12-05 07:29:54,604 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=31.4 pTM=0.219 ipTM=0.114 tol=3.59
2024-12-05 07:30:00,897 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=31.7 pTM=0.22 ipTM=0.117 tol=4.07
2024-12-05 07:30:07,213 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=31.6 pTM=0.217 ipTM=0.109 tol=3.43
2024-12-05 07:30:13,512 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=31.5 pTM=0.219 ipTM=0.113 tol=10.8
2024-12-05 07:30:19,812 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=31.4 pTM=0.22 ipTM=0.113 tol=3.44
2024-12-05 07:30:26,108 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=31.4 pTM=0.219 ipTM=0.113 tol=11.2
2024-12-05 07:30:32,408 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=31.3 pTM=0.218 ipTM=0.112 tol=3.08
2024-12-05 07:30:32,409 alphafold2_multimer_v3_model_3_seed_000 took 195.4s (30 recycles)
2024-12-05 07:30:38,939 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=31.6 pTM=0.184 ipTM=0.0732
2024-12-05 07:30:45,260 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=32.4 pTM=0.189 ipTM=0.082 tol=18.8
2024-12-05 07:30:51,568 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=32.8 pTM=0.19 ipTM=0.0823 tol=10.9
2024-12-05 07:30:57,875 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=32.8 pTM=0.191 ipTM=0.0835 tol=7.63
2024-12-05 07:31:04,192 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=33.3 pTM=0.191 ipTM=0.0833 tol=8.45
2024-12-05 07:31:10,516 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=33.5 pTM=0.191 ipTM=0.0837 tol=5.08
2024-12-05 07:31:16,826 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=33 pTM=0.193 ipTM=0.0867 tol=6.82
2024-12-05 07:31:23,144 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=33.5 pTM=0.192 ipTM=0.085 tol=6.51
2024-12-05 07:31:29,452 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=33.5 pTM=0.194 ipTM=0.0889 tol=3
2024-12-05 07:31:35,763 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=33.3 pTM=0.193 ipTM=0.0891 tol=6.26
2024-12-05 07:31:42,065 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=33.6 pTM=0.194 ipTM=0.0914 tol=5.64
2024-12-05 07:31:48,393 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=33.6 pTM=0.193 ipTM=0.0889 tol=3.64
2024-12-05 07:31:54,703 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=33.5 pTM=0.193 ipTM=0.0898 tol=6.18
2024-12-05 07:32:01,021 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=33.5 pTM=0.193 ipTM=0.0892 tol=2.95
2024-12-05 07:32:07,336 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=33.8 pTM=0.192 ipTM=0.087 tol=5.31
2024-12-05 07:32:13,657 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=33.8 pTM=0.191 ipTM=0.0847 tol=3.86
2024-12-05 07:32:19,969 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=33.8 pTM=0.193 ipTM=0.088 tol=5.28
2024-12-05 07:32:26,290 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=33.6 pTM=0.192 ipTM=0.0878 tol=3.35
2024-12-05 07:32:32,610 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=33.5 pTM=0.191 ipTM=0.0861 tol=5.07
2024-12-05 07:32:38,924 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=33.5 pTM=0.193 ipTM=0.0892 tol=2.72
2024-12-05 07:32:45,237 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=33.6 pTM=0.193 ipTM=0.0887 tol=2.55
2024-12-05 07:32:51,562 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=33.6 pTM=0.193 ipTM=0.0877 tol=4.03
2024-12-05 07:32:57,871 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=33.5 pTM=0.192 ipTM=0.0884 tol=4.68
2024-12-05 07:33:04,189 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=33.4 pTM=0.193 ipTM=0.0896 tol=4.46
2024-12-05 07:33:10,499 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=33.4 pTM=0.193 ipTM=0.0906 tol=3.83
2024-12-05 07:33:16,822 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=33.4 pTM=0.192 ipTM=0.0876 tol=2.98
2024-12-05 07:33:23,146 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=33.6 pTM=0.192 ipTM=0.0879 tol=5.09
2024-12-05 07:33:29,468 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=33.4 pTM=0.193 ipTM=0.0889 tol=3.78
2024-12-05 07:33:35,784 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=33.4 pTM=0.194 ipTM=0.0908 tol=5.11
2024-12-05 07:33:42,097 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=33.1 pTM=0.192 ipTM=0.0878 tol=4.35
2024-12-05 07:33:48,413 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=33.3 pTM=0.192 ipTM=0.0882 tol=2.86
2024-12-05 07:33:48,414 alphafold2_multimer_v3_model_4_seed_000 took 195.8s (30 recycles)
2024-12-05 07:33:54,952 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=31.6 pTM=0.187 ipTM=0.0681
2024-12-05 07:34:01,294 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=32.3 pTM=0.192 ipTM=0.077 tol=16
2024-12-05 07:34:07,641 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=32.5 pTM=0.193 ipTM=0.0802 tol=12.3
2024-12-05 07:34:13,974 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=32.2 pTM=0.196 ipTM=0.0844 tol=8.72
2024-12-05 07:34:20,318 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=32.4 pTM=0.196 ipTM=0.0838 tol=7.9
2024-12-05 07:34:26,647 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=32.5 pTM=0.196 ipTM=0.0857 tol=3.95
2024-12-05 07:34:32,996 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=32.2 pTM=0.197 ipTM=0.085 tol=6.14
2024-12-05 07:34:39,324 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=32.3 pTM=0.197 ipTM=0.085 tol=5.98
2024-12-05 07:34:45,682 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=32.3 pTM=0.198 ipTM=0.0859 tol=3.37
2024-12-05 07:34:52,015 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=32.2 pTM=0.197 ipTM=0.084 tol=3.81
2024-12-05 07:34:58,350 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=32.3 pTM=0.198 ipTM=0.0861 tol=5.63
2024-12-05 07:35:04,682 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=32.2 pTM=0.196 ipTM=0.0849 tol=6.23
2024-12-05 07:35:11,031 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=32.2 pTM=0.197 ipTM=0.0856 tol=6.64
2024-12-05 07:35:17,361 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=32.2 pTM=0.197 ipTM=0.0859 tol=5.97
2024-12-05 07:35:23,700 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=32.3 pTM=0.196 ipTM=0.085 tol=6.36
2024-12-05 07:35:30,040 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=32.4 pTM=0.196 ipTM=0.085 tol=6.38
2024-12-05 07:35:36,384 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=32.4 pTM=0.196 ipTM=0.0853 tol=7.25
2024-12-05 07:35:42,721 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=32.2 pTM=0.196 ipTM=0.0852 tol=6.23
2024-12-05 07:35:49,059 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=32.1 pTM=0.197 ipTM=0.0867 tol=3.61
2024-12-05 07:35:55,395 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=32.3 pTM=0.196 ipTM=0.0856 tol=6.49
2024-12-05 07:36:01,746 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=32.2 pTM=0.197 ipTM=0.0865 tol=5.59
2024-12-05 07:36:08,080 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=32.4 pTM=0.195 ipTM=0.0842 tol=4.79
2024-12-05 07:36:14,414 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=32.3 pTM=0.197 ipTM=0.0864 tol=5.67
2024-12-05 07:36:20,750 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=32.3 pTM=0.196 ipTM=0.0856 tol=6.45
2024-12-05 07:36:27,080 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=32.7 pTM=0.196 ipTM=0.0864 tol=9.49
2024-12-05 07:36:33,421 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=32.4 pTM=0.196 ipTM=0.0851 tol=7.8
2024-12-05 07:36:39,754 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=32.5 pTM=0.196 ipTM=0.0847 tol=6.3
2024-12-05 07:36:46,084 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=32.5 pTM=0.196 ipTM=0.0853 tol=4.73
2024-12-05 07:36:52,418 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=32.5 pTM=0.198 ipTM=0.0864 tol=3.44
2024-12-05 07:36:58,752 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=32.4 pTM=0.197 ipTM=0.0865 tol=2.52
2024-12-05 07:37:05,121 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=32.4 pTM=0.197 ipTM=0.0859 tol=4.96
2024-12-05 07:37:05,121 alphafold2_multimer_v3_model_5_seed_000 took 196.5s (30 recycles)
2024-12-05 07:37:05,314 reranking models by 'multimer' metric
2024-12-05 07:37:06,034 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 07:37:36,945 Relaxation took 31.6s
2024-12-05 07:37:36,945 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=31.3 pTM=0.207 ipTM=0.115
2024-12-05 07:37:58,037 Relaxation took 21.1s
2024-12-05 07:37:58,037 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=31.3 pTM=0.218 ipTM=0.112
2024-12-05 07:38:25,045 Relaxation took 27.0s
2024-12-05 07:38:25,045 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=33.2 pTM=0.195 ipTM=0.0903
2024-12-05 07:38:50,368 Relaxation took 25.3s
2024-12-05 07:38:50,368 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=33.3 pTM=0.192 ipTM=0.0882
2024-12-05 07:39:21,424 Relaxation took 31.1s
2024-12-05 07:39:21,424 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=32.4 pTM=0.197 ipTM=0.0859
2024-12-05 07:39:22,434 Done