2024-12-05 08:25:13,446 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 08:25:13,775 Running on GPU
2024-12-05 08:25:14,771 Found 6 citations for tools or databases
2024-12-05 08:25:14,771 Query 1/1: CREBBP_CDK2 (length 2740)
2024-12-05 08:25:15,033 Sleeping for 8s. Reason: PENDING
2024-12-05 08:25:23,293 Sleeping for 8s. Reason: RUNNING
2024-12-05 08:25:31,547 Sleeping for 8s. Reason: RUNNING
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2024-12-05 08:26:34,382 Sleeping for 6s. Reason: RUNNING
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2024-12-05 08:28:09,480 Sleeping for 9s. Reason: RUNNING
2024-12-05 08:28:18,736 Sleeping for 5s. Reason: RUNNING
2024-12-05 08:28:23,987 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:28:31,239 Sleeping for 10s. Reason: RUNNING
2024-12-05 08:28:41,500 Sleeping for 6s. Reason: RUNNING
2024-12-05 08:28:47,763 Sleeping for 8s. Reason: RUNNING
2024-12-05 08:28:56,025 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:29:03,291 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:29:10,550 Sleeping for 6s. Reason: RUNNING
2024-12-05 08:29:16,803 Sleeping for 10s. Reason: RUNNING
2024-12-05 08:29:27,068 Sleeping for 5s. Reason: RUNNING
2024-12-05 08:29:32,327 Sleeping for 9s. Reason: RUNNING
2024-12-05 08:29:41,585 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:29:48,846 Sleeping for 5s. Reason: RUNNING
2024-12-05 08:29:54,104 Sleeping for 8s. Reason: RUNNING
2024-12-05 08:30:02,361 Sleeping for 10s. Reason: RUNNING
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2024-12-05 08:30:29,133 Sleeping for 8s. Reason: RUNNING
2024-12-05 08:30:42,792 Sleeping for 5s. Reason: PENDING
2024-12-05 08:30:48,050 Sleeping for 8s. Reason: RUNNING
2024-12-05 08:30:56,315 Sleeping for 5s. Reason: RUNNING
2024-12-05 08:31:01,579 Sleeping for 8s. Reason: RUNNING
2024-12-05 08:31:09,837 Sleeping for 10s. Reason: RUNNING
2024-12-05 08:31:20,098 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:31:27,360 Sleeping for 9s. Reason: RUNNING
2024-12-05 08:31:36,624 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:31:43,880 Sleeping for 9s. Reason: RUNNING
2024-12-05 08:31:53,139 Sleeping for 5s. Reason: RUNNING
2024-12-05 08:31:58,387 Sleeping for 5s. Reason: RUNNING
2024-12-05 08:32:03,638 Sleeping for 9s. Reason: RUNNING
2024-12-05 08:32:12,891 Sleeping for 9s. Reason: RUNNING
2024-12-05 08:32:22,151 Sleeping for 10s. Reason: RUNNING
2024-12-05 08:32:32,410 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:32:39,663 Sleeping for 10s. Reason: RUNNING
2024-12-05 08:32:49,922 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:32:57,183 Sleeping for 8s. Reason: RUNNING
2024-12-05 08:33:05,444 Sleeping for 6s. Reason: RUNNING
2024-12-05 08:33:11,713 Sleeping for 9s. Reason: RUNNING
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2024-12-05 08:33:29,235 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:33:36,492 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:33:43,760 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:33:51,030 Sleeping for 5s. Reason: RUNNING
2024-12-05 08:33:56,289 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:34:03,548 Sleeping for 8s. Reason: RUNNING
2024-12-05 08:34:11,808 Sleeping for 9s. Reason: RUNNING
2024-12-05 08:34:21,065 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:34:28,330 Sleeping for 8s. Reason: RUNNING
2024-12-05 08:34:36,591 Sleeping for 7s. Reason: RUNNING
2024-12-05 08:34:43,852 Sleeping for 10s. Reason: RUNNING
2024-12-05 08:34:54,110 Sleeping for 6s. Reason: RUNNING
2024-12-05 08:35:00,379 Sleeping for 10s. Reason: RUNNING
2024-12-05 08:35:10,646 Sleeping for 10s. Reason: RUNNING
2024-12-05 08:35:31,149 Setting max_seq=508, max_extra_seq=2048
2024-12-05 08:44:53,782 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=41.6 pTM=0.377 ipTM=0.295
2024-12-05 08:51:38,301 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=43 pTM=0.388 ipTM=0.314 tol=29.3
2024-12-05 08:58:22,931 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=42.6 pTM=0.388 ipTM=0.292 tol=20.9
2024-12-05 09:05:07,419 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=42.6 pTM=0.386 ipTM=0.295 tol=16.7
2024-12-05 09:11:51,989 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=42.8 pTM=0.389 ipTM=0.305 tol=11.7
2024-12-05 09:18:36,537 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=42.7 pTM=0.387 ipTM=0.298 tol=18.8
2024-12-05 09:25:21,020 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=42.4 pTM=0.385 ipTM=0.314 tol=16.8
2024-12-05 09:32:05,565 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=42.5 pTM=0.384 ipTM=0.304 tol=10.3
2024-12-05 09:38:50,203 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=42.7 pTM=0.388 ipTM=0.308 tol=16
2024-12-05 09:45:34,901 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=42.7 pTM=0.387 ipTM=0.3 tol=17.3
2024-12-05 09:52:19,548 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42.8 pTM=0.388 ipTM=0.301 tol=11.5
2024-12-05 09:59:04,149 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=42.9 pTM=0.388 ipTM=0.302 tol=18.3
2024-12-05 10:05:48,702 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=42.9 pTM=0.387 ipTM=0.295 tol=19.3
2024-12-05 10:12:33,110 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=42.9 pTM=0.388 ipTM=0.301 tol=19.2
2024-12-05 10:19:17,780 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42.8 pTM=0.389 ipTM=0.28 tol=11.5
2024-12-05 10:26:02,381 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=42.7 pTM=0.388 ipTM=0.3 tol=15.5
2024-12-05 10:32:46,953 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=42.4 pTM=0.386 ipTM=0.291 tol=14.6
2024-12-05 10:39:31,601 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=42.7 pTM=0.388 ipTM=0.291 tol=9.58
2024-12-05 10:46:16,121 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=42.8 pTM=0.388 ipTM=0.295 tol=14.4
2024-12-05 10:53:00,649 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42.8 pTM=0.388 ipTM=0.312 tol=15.5
2024-12-05 10:59:45,127 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=42.7 pTM=0.387 ipTM=0.302 tol=14.3
2024-12-05 11:06:29,652 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.9 pTM=0.388 ipTM=0.297 tol=9.98
2024-12-05 11:13:14,228 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42.9 pTM=0.388 ipTM=0.309 tol=9.75
2024-12-05 11:19:58,733 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=43.1 pTM=0.388 ipTM=0.309 tol=13.4
2024-12-05 11:26:43,344 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42.9 pTM=0.388 ipTM=0.3 tol=8.17
2024-12-05 11:33:27,777 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=42.9 pTM=0.389 ipTM=0.31 tol=13
2024-12-05 11:40:12,284 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=42.8 pTM=0.387 ipTM=0.295 tol=10.1
2024-12-05 11:46:56,881 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=42.9 pTM=0.389 ipTM=0.292 tol=8.83
2024-12-05 11:53:41,503 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=42.9 pTM=0.39 ipTM=0.299 tol=14
2024-12-05 12:00:26,117 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=42.9 pTM=0.388 ipTM=0.297 tol=14.1
2024-12-05 12:07:10,702 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=42.7 pTM=0.387 ipTM=0.295 tol=8.63
2024-12-05 12:07:10,706 alphafold2_multimer_v3_model_1_seed_000 took 12694.5s (30 recycles)
2024-12-05 12:13:59,746 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=42.4 pTM=0.381 ipTM=0.253
2024-12-05 12:20:45,074 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.8 pTM=0.404 ipTM=0.252 tol=23
2024-12-05 12:27:30,316 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=44.7 pTM=0.399 ipTM=0.258 tol=16.5
2024-12-05 12:34:15,564 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=44.8 pTM=0.399 ipTM=0.251 tol=13.5
2024-12-05 12:41:00,814 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=44.7 pTM=0.399 ipTM=0.246 tol=10.8
2024-12-05 12:47:46,112 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=44.7 pTM=0.401 ipTM=0.247 tol=9.99
2024-12-05 12:54:31,224 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=44.7 pTM=0.401 ipTM=0.247 tol=10.6
2024-12-05 13:01:16,452 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=44.7 pTM=0.401 ipTM=0.255 tol=8.69
2024-12-05 13:08:01,737 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=44.7 pTM=0.401 ipTM=0.254 tol=7.29
2024-12-05 13:14:47,050 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=44.8 pTM=0.402 ipTM=0.253 tol=7.23
2024-12-05 13:21:32,324 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=44.8 pTM=0.402 ipTM=0.253 tol=7.34
2024-12-05 13:28:17,513 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=44.8 pTM=0.401 ipTM=0.25 tol=7.34
2024-12-05 13:35:02,759 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=44.8 pTM=0.4 ipTM=0.246 tol=7.13
2024-12-05 13:41:48,040 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=44.8 pTM=0.401 ipTM=0.246 tol=6.13
2024-12-05 13:48:33,306 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=44.7 pTM=0.4 ipTM=0.249 tol=7.23
2024-12-05 13:55:18,566 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=44.6 pTM=0.4 ipTM=0.25 tol=7.56
2024-12-05 14:02:03,725 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=44.6 pTM=0.401 ipTM=0.25 tol=8.59
2024-12-05 14:08:48,869 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=44.7 pTM=0.403 ipTM=0.255 tol=14.1
2024-12-05 14:15:33,965 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=44.7 pTM=0.401 ipTM=0.253 tol=9.44
2024-12-05 14:22:19,148 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=44.7 pTM=0.402 ipTM=0.254 tol=7.03
2024-12-05 14:29:04,195 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=44.6 pTM=0.4 ipTM=0.252 tol=7.85
2024-12-05 14:35:49,400 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=44.7 pTM=0.4 ipTM=0.252 tol=6.77
2024-12-05 14:42:34,514 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=44.7 pTM=0.4 ipTM=0.251 tol=8.25
2024-12-05 14:49:19,735 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=44.8 pTM=0.401 ipTM=0.249 tol=9.18
2024-12-05 14:56:04,907 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=44.6 pTM=0.401 ipTM=0.248 tol=8.69
2024-12-05 15:02:49,966 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=44.7 pTM=0.401 ipTM=0.247 tol=8.45
2024-12-05 15:09:35,095 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=44.7 pTM=0.4 ipTM=0.248 tol=7.2
2024-12-05 15:16:20,287 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=44.7 pTM=0.401 ipTM=0.25 tol=6.86
2024-12-05 15:23:05,319 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=44.7 pTM=0.402 ipTM=0.247 tol=7.42
2024-12-05 15:29:50,322 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=44.8 pTM=0.402 ipTM=0.249 tol=10.1
2024-12-05 15:36:35,434 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=44.6 pTM=0.403 ipTM=0.252 tol=9.43
2024-12-05 15:36:35,437 alphafold2_multimer_v3_model_2_seed_000 took 12560.5s (30 recycles)
2024-12-05 15:43:25,319 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=41.7 pTM=0.372 ipTM=0.462
2024-12-05 15:50:11,144 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=41.1 pTM=0.38 ipTM=0.283 tol=24.7
2024-12-05 15:56:57,045 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=43.4 pTM=0.394 ipTM=0.42 tol=23.7
2024-12-05 16:03:42,944 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=43.2 pTM=0.391 ipTM=0.374 tol=17.8
2024-12-05 16:10:28,913 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=43.4 pTM=0.392 ipTM=0.359 tol=15.4
2024-12-05 16:17:14,941 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=43.7 pTM=0.395 ipTM=0.299 tol=13
2024-12-05 16:24:00,958 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.9 pTM=0.396 ipTM=0.383 tol=13.1
2024-12-05 16:30:46,928 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=43.7 pTM=0.396 ipTM=0.355 tol=11
2024-12-05 16:37:33,015 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=44 pTM=0.398 ipTM=0.328 tol=10.5
2024-12-05 16:44:19,069 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=44.2 pTM=0.399 ipTM=0.382 tol=10.7
2024-12-05 16:51:05,245 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=44.1 pTM=0.399 ipTM=0.317 tol=9.02
2024-12-05 16:57:51,359 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=44.4 pTM=0.399 ipTM=0.404 tol=9.27
2024-12-05 17:04:37,524 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=44.2 pTM=0.4 ipTM=0.276 tol=7.73
2024-12-05 17:11:23,646 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=44.4 pTM=0.401 ipTM=0.267 tol=6.39
2024-12-05 17:18:09,814 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=44.3 pTM=0.4 ipTM=0.279 tol=6.65
2024-12-05 17:24:55,936 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44.2 pTM=0.4 ipTM=0.297 tol=8.92
2024-12-05 17:31:42,046 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=44.2 pTM=0.4 ipTM=0.292 tol=9.45
2024-12-05 17:38:28,158 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=44.4 pTM=0.4 ipTM=0.292 tol=9.68
2024-12-05 17:45:14,280 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=44.4 pTM=0.4 ipTM=0.332 tol=9.05
2024-12-05 17:52:00,374 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=44.3 pTM=0.4 ipTM=0.295 tol=8.33
2024-12-05 17:58:46,473 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=44.2 pTM=0.401 ipTM=0.34 tol=9.56
2024-12-05 18:05:32,568 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=44.2 pTM=0.399 ipTM=0.315 tol=9.73
2024-12-05 18:12:18,605 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=44.5 pTM=0.401 ipTM=0.344 tol=12
2024-12-05 18:19:04,737 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=44.4 pTM=0.4 ipTM=0.305 tol=8.85
2024-12-05 18:25:50,828 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=44.3 pTM=0.4 ipTM=0.315 tol=9.62
2024-12-05 18:32:36,923 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=44.2 pTM=0.399 ipTM=0.385 tol=8.77
2024-12-05 18:39:23,060 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=44.2 pTM=0.4 ipTM=0.307 tol=9.02
2024-12-05 18:46:09,119 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=44.5 pTM=0.4 ipTM=0.417 tol=9.77
2024-12-05 18:52:55,295 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=44.3 pTM=0.4 ipTM=0.284 tol=14.8
2024-12-05 18:59:41,446 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=44.4 pTM=0.399 ipTM=0.27 tol=12.4
2024-12-05 19:06:27,480 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=44.4 pTM=0.399 ipTM=0.299 tol=9.42
2024-12-05 19:06:27,485 alphafold2_multimer_v3_model_3_seed_000 took 12587.8s (30 recycles)
2024-12-05 19:13:17,241 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=40 pTM=0.372 ipTM=0.404
2024-12-05 19:20:03,774 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=40.6 pTM=0.385 ipTM=0.552 tol=29.7
2024-12-05 19:26:50,280 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=41.1 pTM=0.387 ipTM=0.335 tol=22
2024-12-05 19:33:36,733 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=41.2 pTM=0.381 ipTM=0.268 tol=20.6
2024-12-05 19:40:23,265 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=41.2 pTM=0.384 ipTM=0.273 tol=18.3
2024-12-05 19:47:09,617 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=41 pTM=0.387 ipTM=0.31 tol=18.6
2024-12-05 19:53:55,925 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=41.1 pTM=0.384 ipTM=0.295 tol=18.1
2024-12-05 20:00:42,453 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=40.9 pTM=0.382 ipTM=0.295 tol=14.5
2024-12-05 20:07:28,803 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=41.4 pTM=0.387 ipTM=0.357 tol=18.8
2024-12-05 20:14:15,249 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.4 pTM=0.386 ipTM=0.312 tol=19.3
2024-12-05 20:21:01,579 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=41.7 pTM=0.392 ipTM=0.328 tol=20.5
2024-12-05 20:27:47,937 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=41.3 pTM=0.384 ipTM=0.282 tol=17.6
2024-12-05 20:34:34,336 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=41.5 pTM=0.386 ipTM=0.281 tol=19.9
2024-12-05 20:41:20,655 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=41.6 pTM=0.385 ipTM=0.387 tol=14
2024-12-05 20:48:06,904 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=41.5 pTM=0.385 ipTM=0.302 tol=15.3
2024-12-05 20:54:53,141 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=41.9 pTM=0.393 ipTM=0.322 tol=20
2024-12-05 21:01:39,468 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=41.7 pTM=0.385 ipTM=0.271 tol=17.5
2024-12-05 21:08:25,810 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=42 pTM=0.388 ipTM=0.399 tol=17.8
2024-12-05 21:15:12,078 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=41.5 pTM=0.384 ipTM=0.277 tol=20.1
2024-12-05 21:21:58,646 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=41.9 pTM=0.386 ipTM=0.271 tol=18.4
2024-12-05 21:28:44,889 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=41.6 pTM=0.384 ipTM=0.492 tol=16
2024-12-05 21:35:31,268 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=41.9 pTM=0.385 ipTM=0.298 tol=17.9
2024-12-05 21:42:17,541 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42 pTM=0.386 ipTM=0.281 tol=16.6
2024-12-05 21:49:03,759 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=42.3 pTM=0.395 ipTM=0.329 tol=15.9
2024-12-05 21:55:49,980 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=41.9 pTM=0.387 ipTM=0.285 tol=17.4
2024-12-05 22:02:36,504 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=41.8 pTM=0.389 ipTM=0.29 tol=19.8
2024-12-05 22:09:22,872 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=41.8 pTM=0.386 ipTM=0.365 tol=15.6
2024-12-05 22:16:09,247 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=42 pTM=0.389 ipTM=0.325 tol=12.5
2024-12-05 22:22:55,509 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=41.8 pTM=0.387 ipTM=0.301 tol=15.9
2024-12-05 22:29:41,851 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=41.8 pTM=0.387 ipTM=0.315 tol=12.8
2024-12-05 22:36:28,202 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=42 pTM=0.386 ipTM=0.361 tol=13.7
2024-12-05 22:36:28,206 alphafold2_multimer_v3_model_4_seed_000 took 12596.5s (30 recycles)
2024-12-05 22:43:18,077 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=40.9 pTM=0.377 ipTM=0.263
2024-12-05 22:50:04,080 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=42.5 pTM=0.399 ipTM=0.314 tol=23.6
2024-12-05 22:56:50,054 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=42.2 pTM=0.394 ipTM=0.278 tol=20.3
2024-12-05 23:03:36,193 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=42.1 pTM=0.391 ipTM=0.258 tol=19.2
2024-12-05 23:10:22,286 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=42.8 pTM=0.394 ipTM=0.261 tol=18.9
2024-12-05 23:17:08,379 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=43.2 pTM=0.396 ipTM=0.259 tol=23.1
2024-12-05 23:23:54,535 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=42.9 pTM=0.395 ipTM=0.258 tol=20.4
2024-12-05 23:30:40,666 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=42.8 pTM=0.395 ipTM=0.26 tol=18.8
2024-12-05 23:37:26,943 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=42.9 pTM=0.395 ipTM=0.256 tol=18
2024-12-05 23:44:13,230 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=43.1 pTM=0.395 ipTM=0.261 tol=15
2024-12-05 23:50:59,318 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.8 pTM=0.395 ipTM=0.258 tol=14.9
2024-12-05 23:57:45,418 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=43 pTM=0.395 ipTM=0.259 tol=13.4
2024-12-06 00:04:31,556 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42.8 pTM=0.393 ipTM=0.258 tol=14.4
2024-12-06 00:11:17,717 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=43.1 pTM=0.395 ipTM=0.255 tol=21.9
2024-12-06 00:18:03,825 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.6 pTM=0.392 ipTM=0.26 tol=18.6
2024-12-06 00:24:49,800 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.9 pTM=0.397 ipTM=0.258 tol=21.9
2024-12-06 00:31:35,888 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.7 pTM=0.394 ipTM=0.26 tol=13.8
2024-12-06 00:38:21,902 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43.2 pTM=0.398 ipTM=0.259 tol=13.3
2024-12-06 00:45:07,927 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=42.8 pTM=0.394 ipTM=0.261 tol=12.5
2024-12-06 00:51:54,042 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43 pTM=0.398 ipTM=0.256 tol=13.2
2024-12-06 00:58:40,156 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=42.5 pTM=0.393 ipTM=0.258 tol=12.2
2024-12-06 01:05:26,157 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43.2 pTM=0.399 ipTM=0.261 tol=14.2
2024-12-06 01:12:12,293 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.2 pTM=0.395 ipTM=0.263 tol=11.9
2024-12-06 01:18:58,426 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43.3 pTM=0.397 ipTM=0.253 tol=12.5
2024-12-06 01:25:44,589 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.6 pTM=0.392 ipTM=0.26 tol=12.1
2024-12-06 01:32:30,719 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=42.9 pTM=0.398 ipTM=0.257 tol=12.2
2024-12-06 01:39:16,791 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=42.8 pTM=0.395 ipTM=0.258 tol=12.2
2024-12-06 01:46:02,818 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.1 pTM=0.399 ipTM=0.258 tol=15.6
2024-12-06 01:52:48,836 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43 pTM=0.396 ipTM=0.259 tol=14.5
2024-12-06 01:59:34,965 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43 pTM=0.397 ipTM=0.257 tol=13
2024-12-06 02:06:21,140 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42.8 pTM=0.395 ipTM=0.274 tol=14.9
2024-12-06 02:06:21,144 alphafold2_multimer_v3_model_5_seed_000 took 12588.7s (30 recycles)
2024-12-06 02:06:25,397 reranking models by 'multimer' metric
2024-12-06 02:06:30,536 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 02:23:57,021 Relaxation took 1051.6s
2024-12-06 02:23:57,022 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=42 pTM=0.386 ipTM=0.361
2024-12-06 02:34:00,578 Relaxation took 603.6s
2024-12-06 02:34:00,578 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=44.4 pTM=0.399 ipTM=0.299
2024-12-06 02:50:18,047 Relaxation took 977.5s
2024-12-06 02:50:18,048 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=42.7 pTM=0.387 ipTM=0.295
2024-12-06 03:04:41,374 Relaxation took 863.3s
2024-12-06 03:04:41,376 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42.8 pTM=0.395 ipTM=0.274
2024-12-06 03:15:39,682 Relaxation took 658.3s
2024-12-06 03:15:39,682 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=44.6 pTM=0.403 ipTM=0.252
2024-12-06 03:15:48,776 Done