2024-12-05 10:08:29,279 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-05 10:08:29,640 Running on GPU 2024-12-05 10:08:36,107 Found 6 citations for tools or databases 2024-12-05 10:08:36,107 Query 1/1: DCAF12_SHARPIN (length 840) 2024-12-05 10:08:37,275 Sleeping for 8s. Reason: PENDING 2024-12-05 10:08:45,533 Sleeping for 8s. Reason: RUNNING 2024-12-05 10:08:53,792 Sleeping for 10s. Reason: RUNNING 2024-12-05 10:09:04,054 Sleeping for 8s. Reason: RUNNING 2024-12-05 10:09:12,313 Sleeping for 7s. Reason: RUNNING 2024-12-05 10:09:19,719 Sleeping for 8s. Reason: RUNNING 2024-12-05 10:09:27,977 Sleeping for 9s. Reason: RUNNING 2024-12-05 10:09:38,904 Setting max_seq=508, max_extra_seq=2048 2024-12-05 10:12:21,169 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.6 pTM=0.554 ipTM=0.339 2024-12-05 10:12:37,204 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.8 pTM=0.62 ipTM=0.633 tol=14.4 2024-12-05 10:12:53,278 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.8 pTM=0.615 ipTM=0.675 tol=11 2024-12-05 10:13:09,398 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.6 pTM=0.628 ipTM=0.729 tol=4.42 2024-12-05 10:13:25,523 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.1 pTM=0.643 ipTM=0.728 tol=11.9 2024-12-05 10:13:41,670 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.1 pTM=0.633 ipTM=0.737 tol=2.92 2024-12-05 10:13:57,829 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.9 pTM=0.631 ipTM=0.728 tol=2.18 2024-12-05 10:14:13,982 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.9 pTM=0.636 ipTM=0.725 tol=1.31 2024-12-05 10:14:30,155 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.6 pTM=0.63 ipTM=0.728 tol=3.44 2024-12-05 10:14:46,323 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.9 pTM=0.636 ipTM=0.734 tol=6.73 2024-12-05 10:15:02,498 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.9 pTM=0.643 ipTM=0.739 tol=2.72 2024-12-05 10:15:18,666 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71.1 pTM=0.641 ipTM=0.741 tol=1.04 2024-12-05 10:15:34,834 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.9 pTM=0.639 ipTM=0.736 tol=1.74 2024-12-05 10:15:51,036 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.9 pTM=0.641 ipTM=0.735 tol=1.85 2024-12-05 10:16:07,225 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.1 pTM=0.641 ipTM=0.739 tol=1.11 2024-12-05 10:16:23,417 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=71.4 pTM=0.641 ipTM=0.743 tol=1.38 2024-12-05 10:16:39,601 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.1 pTM=0.643 ipTM=0.741 tol=1.28 2024-12-05 10:16:55,798 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.6 pTM=0.639 ipTM=0.741 tol=1.86 2024-12-05 10:17:11,969 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.2 pTM=0.644 ipTM=0.742 tol=2.03 2024-12-05 10:17:28,155 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71 pTM=0.641 ipTM=0.739 tol=1.15 2024-12-05 10:17:44,335 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.8 pTM=0.639 ipTM=0.733 tol=1.66 2024-12-05 10:18:00,512 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=71 pTM=0.638 ipTM=0.737 tol=1.51 2024-12-05 10:18:16,696 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71 pTM=0.64 ipTM=0.738 tol=1.44 2024-12-05 10:18:32,880 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71.1 pTM=0.638 ipTM=0.738 tol=2.14 2024-12-05 10:18:49,052 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.8 pTM=0.637 ipTM=0.736 tol=1.31 2024-12-05 10:19:05,238 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.9 pTM=0.638 ipTM=0.738 tol=1.37 2024-12-05 10:19:21,421 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.9 pTM=0.637 ipTM=0.74 tol=1.07 2024-12-05 10:19:37,594 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.8 pTM=0.637 ipTM=0.738 tol=1.65 2024-12-05 10:19:53,759 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.9 pTM=0.636 ipTM=0.736 tol=1.45 2024-12-05 10:20:09,944 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70.9 pTM=0.636 ipTM=0.741 tol=0.66 2024-12-05 10:20:26,121 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.9 pTM=0.636 ipTM=0.733 tol=0.69 2024-12-05 10:20:26,121 alphafold2_multimer_v3_model_1_seed_000 took 639.6s (30 recycles) 2024-12-05 10:20:42,868 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.9 pTM=0.511 ipTM=0.258 2024-12-05 10:20:59,070 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.1 pTM=0.596 ipTM=0.635 tol=12 2024-12-05 10:21:15,267 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.1 pTM=0.618 ipTM=0.673 tol=7.62 2024-12-05 10:21:31,468 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.9 pTM=0.621 ipTM=0.678 tol=4.19 2024-12-05 10:21:47,671 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.2 pTM=0.631 ipTM=0.708 tol=3.69 2024-12-05 10:22:03,881 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.4 pTM=0.635 ipTM=0.714 tol=2.22 2024-12-05 10:22:20,081 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.2 pTM=0.637 ipTM=0.718 tol=2.28 2024-12-05 10:22:36,293 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.2 pTM=0.638 ipTM=0.718 tol=1.18 2024-12-05 10:22:52,500 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.2 pTM=0.636 ipTM=0.714 tol=1.02 2024-12-05 10:23:08,706 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.6 pTM=0.639 ipTM=0.722 tol=2.22 2024-12-05 10:23:24,909 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.4 pTM=0.638 ipTM=0.719 tol=1.54 2024-12-05 10:23:41,127 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.9 pTM=0.643 ipTM=0.735 tol=1.06 2024-12-05 10:23:57,327 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.4 pTM=0.637 ipTM=0.715 tol=1.16 2024-12-05 10:24:13,533 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.3 pTM=0.635 ipTM=0.717 tol=1.8 2024-12-05 10:24:29,739 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.6 pTM=0.64 ipTM=0.721 tol=1.94 2024-12-05 10:24:45,941 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72 pTM=0.636 ipTM=0.716 tol=11 2024-12-05 10:25:02,153 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.8 pTM=0.631 ipTM=0.722 tol=2.01 2024-12-05 10:25:18,356 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.1 pTM=0.639 ipTM=0.725 tol=2.25 2024-12-05 10:25:34,566 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.9 pTM=0.635 ipTM=0.726 tol=1.86 2024-12-05 10:25:50,776 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.1 pTM=0.64 ipTM=0.725 tol=1.41 2024-12-05 10:26:06,978 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.7 pTM=0.635 ipTM=0.723 tol=1.54 2024-12-05 10:26:23,180 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.2 pTM=0.638 ipTM=0.719 tol=2.23 2024-12-05 10:26:39,379 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.8 pTM=0.634 ipTM=0.724 tol=2.39 2024-12-05 10:26:55,572 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.2 pTM=0.645 ipTM=0.721 tol=3.31 2024-12-05 10:27:11,757 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.5 pTM=0.633 ipTM=0.724 tol=2.81 2024-12-05 10:27:27,946 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=72.6 pTM=0.648 ipTM=0.725 tol=1.27 2024-12-05 10:27:44,150 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.9 pTM=0.641 ipTM=0.734 tol=1.14 2024-12-05 10:28:00,373 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.2 pTM=0.646 ipTM=0.728 tol=1.49 2024-12-05 10:28:16,575 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.9 pTM=0.638 ipTM=0.729 tol=1.53 2024-12-05 10:28:32,786 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72.1 pTM=0.643 ipTM=0.73 tol=1.54 2024-12-05 10:28:48,999 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.8 pTM=0.635 ipTM=0.728 tol=1.31 2024-12-05 10:28:49,000 alphafold2_multimer_v3_model_2_seed_000 took 502.3s (30 recycles) 2024-12-05 10:29:05,794 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.4 pTM=0.541 ipTM=0.252 2024-12-05 10:29:22,039 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64 pTM=0.521 ipTM=0.227 tol=9.79 2024-12-05 10:29:38,256 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.7 pTM=0.522 ipTM=0.226 tol=8.22 2024-12-05 10:29:54,478 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.3 pTM=0.542 ipTM=0.244 tol=7.32 2024-12-05 10:30:10,693 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.9 pTM=0.521 ipTM=0.207 tol=9.85 2024-12-05 10:30:26,918 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.7 pTM=0.513 ipTM=0.231 tol=7.91 2024-12-05 10:30:43,128 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.8 pTM=0.527 ipTM=0.214 tol=7.18 2024-12-05 10:30:59,359 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.8 pTM=0.522 ipTM=0.226 tol=8.26 2024-12-05 10:31:15,572 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65 pTM=0.522 ipTM=0.221 tol=3.77 2024-12-05 10:31:31,795 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.6 pTM=0.526 ipTM=0.228 tol=5.07 2024-12-05 10:31:48,019 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65 pTM=0.526 ipTM=0.227 tol=7.83 2024-12-05 10:32:04,241 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.6 pTM=0.529 ipTM=0.233 tol=7.3 2024-12-05 10:32:20,463 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.6 pTM=0.528 ipTM=0.225 tol=2.65 2024-12-05 10:32:36,686 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.1 pTM=0.539 ipTM=0.228 tol=5.55 2024-12-05 10:32:52,904 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.5 pTM=0.526 ipTM=0.218 tol=6.87 2024-12-05 10:33:09,123 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.1 pTM=0.515 ipTM=0.215 tol=6.74 2024-12-05 10:33:25,339 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.2 pTM=0.527 ipTM=0.225 tol=5.43 2024-12-05 10:33:41,561 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.4 pTM=0.529 ipTM=0.221 tol=3.61 2024-12-05 10:33:57,791 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.6 pTM=0.526 ipTM=0.219 tol=2.4 2024-12-05 10:34:14,015 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.2 pTM=0.526 ipTM=0.224 tol=2.75 2024-12-05 10:34:30,229 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.3 pTM=0.525 ipTM=0.223 tol=3.04 2024-12-05 10:34:46,437 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65 pTM=0.518 ipTM=0.236 tol=6.25 2024-12-05 10:35:02,651 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.4 pTM=0.523 ipTM=0.216 tol=4.15 2024-12-05 10:35:18,866 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.1 pTM=0.522 ipTM=0.234 tol=4.39 2024-12-05 10:35:35,077 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.7 pTM=0.523 ipTM=0.217 tol=2.22 2024-12-05 10:35:51,314 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.4 pTM=0.526 ipTM=0.222 tol=3.78 2024-12-05 10:36:07,552 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.8 pTM=0.525 ipTM=0.215 tol=6.09 2024-12-05 10:36:23,809 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.4 pTM=0.52 ipTM=0.213 tol=5.15 2024-12-05 10:36:40,029 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68 pTM=0.581 ipTM=0.514 tol=15.4 2024-12-05 10:36:56,261 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.1 pTM=0.613 ipTM=0.633 tol=3.83 2024-12-05 10:37:12,467 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.5 pTM=0.606 ipTM=0.62 tol=10.3 2024-12-05 10:37:12,468 alphafold2_multimer_v3_model_3_seed_000 took 502.9s (30 recycles) 2024-12-05 10:37:29,233 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.9 pTM=0.552 ipTM=0.33 2024-12-05 10:37:45,455 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.4 pTM=0.523 ipTM=0.271 tol=15.7 2024-12-05 10:38:01,679 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.2 pTM=0.513 ipTM=0.227 tol=11.7 2024-12-05 10:38:17,910 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.2 pTM=0.53 ipTM=0.244 tol=6.63 2024-12-05 10:38:34,151 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.7 pTM=0.525 ipTM=0.22 tol=7.78 2024-12-05 10:38:50,389 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64 pTM=0.528 ipTM=0.232 tol=4.6 2024-12-05 10:39:06,624 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.6 pTM=0.53 ipTM=0.22 tol=2.33 2024-12-05 10:39:22,859 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.1 pTM=0.527 ipTM=0.225 tol=2.26 2024-12-05 10:39:39,097 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.3 pTM=0.529 ipTM=0.219 tol=6.54 2024-12-05 10:39:55,341 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.8 pTM=0.529 ipTM=0.217 tol=3.73 2024-12-05 10:40:11,580 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.7 pTM=0.529 ipTM=0.227 tol=3.12 2024-12-05 10:40:27,831 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.9 pTM=0.528 ipTM=0.228 tol=2.52 2024-12-05 10:40:44,065 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.6 pTM=0.533 ipTM=0.225 tol=1.76 2024-12-05 10:41:00,312 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64 pTM=0.527 ipTM=0.229 tol=2.28 2024-12-05 10:41:16,561 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.2 pTM=0.531 ipTM=0.241 tol=3.31 2024-12-05 10:41:32,802 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.3 pTM=0.529 ipTM=0.224 tol=1.8 2024-12-05 10:41:49,035 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.4 pTM=0.534 ipTM=0.227 tol=1.5 2024-12-05 10:42:05,278 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.6 pTM=0.53 ipTM=0.224 tol=2.82 2024-12-05 10:42:21,522 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.2 pTM=0.533 ipTM=0.234 tol=2.1 2024-12-05 10:42:37,761 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.2 pTM=0.529 ipTM=0.225 tol=4.32 2024-12-05 10:42:54,000 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.2 pTM=0.533 ipTM=0.232 tol=4.22 2024-12-05 10:43:10,247 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.3 pTM=0.528 ipTM=0.23 tol=2.09 2024-12-05 10:43:26,486 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.7 pTM=0.534 ipTM=0.236 tol=1.77 2024-12-05 10:43:42,740 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.3 pTM=0.533 ipTM=0.224 tol=2.58 2024-12-05 10:43:59,006 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.4 pTM=0.533 ipTM=0.23 tol=3.64 2024-12-05 10:44:15,273 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.5 pTM=0.532 ipTM=0.226 tol=1.6 2024-12-05 10:44:31,517 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.2 pTM=0.533 ipTM=0.228 tol=2.08 2024-12-05 10:44:47,776 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.5 pTM=0.538 ipTM=0.221 tol=3.3 2024-12-05 10:45:04,029 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.8 pTM=0.537 ipTM=0.231 tol=3.27 2024-12-05 10:45:20,281 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.2 pTM=0.531 ipTM=0.224 tol=3.24 2024-12-05 10:45:36,532 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.2 pTM=0.532 ipTM=0.224 tol=1.05 2024-12-05 10:45:36,533 alphafold2_multimer_v3_model_4_seed_000 took 503.5s (30 recycles) 2024-12-05 10:45:53,316 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.4 pTM=0.514 ipTM=0.236 2024-12-05 10:46:09,586 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.9 pTM=0.513 ipTM=0.278 tol=14.3 2024-12-05 10:46:25,824 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.1 pTM=0.521 ipTM=0.22 tol=6.62 2024-12-05 10:46:42,090 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.4 pTM=0.52 ipTM=0.232 tol=7.09 2024-12-05 10:46:58,361 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.6 pTM=0.522 ipTM=0.242 tol=4.31 2024-12-05 10:47:14,626 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.3 pTM=0.522 ipTM=0.235 tol=5.16 2024-12-05 10:47:30,886 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.5 pTM=0.524 ipTM=0.219 tol=2.86 2024-12-05 10:47:47,149 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.4 pTM=0.521 ipTM=0.226 tol=4.07 2024-12-05 10:48:03,416 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.6 pTM=0.524 ipTM=0.213 tol=2.65 2024-12-05 10:48:19,684 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.8 pTM=0.519 ipTM=0.23 tol=3.22 2024-12-05 10:48:35,934 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.2 pTM=0.522 ipTM=0.235 tol=3.48 2024-12-05 10:48:52,198 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.6 pTM=0.519 ipTM=0.228 tol=2.79 2024-12-05 10:49:08,470 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.4 pTM=0.519 ipTM=0.215 tol=2.44 2024-12-05 10:49:24,734 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.2 pTM=0.519 ipTM=0.218 tol=6.02 2024-12-05 10:49:41,009 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.2 pTM=0.519 ipTM=0.231 tol=1.88 2024-12-05 10:49:57,265 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.2 pTM=0.513 ipTM=0.216 tol=4.45 2024-12-05 10:50:13,519 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.2 pTM=0.519 ipTM=0.21 tol=2.94 2024-12-05 10:50:29,793 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.2 pTM=0.517 ipTM=0.216 tol=3.58 2024-12-05 10:50:46,061 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.5 pTM=0.52 ipTM=0.217 tol=3.72 2024-12-05 10:51:02,328 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.2 pTM=0.518 ipTM=0.217 tol=3.7 2024-12-05 10:51:18,610 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.3 pTM=0.517 ipTM=0.225 tol=4.27 2024-12-05 10:51:34,892 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.1 pTM=0.516 ipTM=0.225 tol=2.22 2024-12-05 10:51:51,178 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.2 pTM=0.517 ipTM=0.225 tol=4.04 2024-12-05 10:52:07,459 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.2 pTM=0.519 ipTM=0.216 tol=3.34 2024-12-05 10:52:23,727 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.9 pTM=0.515 ipTM=0.213 tol=3.25 2024-12-05 10:52:39,996 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.1 pTM=0.518 ipTM=0.21 tol=3.25 2024-12-05 10:52:56,258 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.9 pTM=0.52 ipTM=0.216 tol=3.48 2024-12-05 10:53:12,531 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.3 pTM=0.52 ipTM=0.217 tol=5.54 2024-12-05 10:53:28,796 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.2 pTM=0.519 ipTM=0.229 tol=4.92 2024-12-05 10:53:45,069 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.1 pTM=0.515 ipTM=0.229 tol=3.98 2024-12-05 10:54:01,323 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.1 pTM=0.519 ipTM=0.226 tol=4.2 2024-12-05 10:54:01,323 alphafold2_multimer_v3_model_5_seed_000 took 504.2s (30 recycles) 2024-12-05 10:54:01,891 reranking models by 'multimer' metric 2024-12-05 10:54:05,172 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-05 10:54:39,184 Relaxation took 37.3s 2024-12-05 10:54:39,184 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.9 pTM=0.636 ipTM=0.733 2024-12-05 10:55:08,553 Relaxation took 29.4s 2024-12-05 10:55:08,553 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.8 pTM=0.635 ipTM=0.728 2024-12-05 10:55:55,353 Relaxation took 46.8s 2024-12-05 10:55:55,353 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.5 pTM=0.606 ipTM=0.62 2024-12-05 10:57:19,844 Relaxation took 84.5s 2024-12-05 10:57:19,844 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.2 pTM=0.532 ipTM=0.224 2024-12-05 10:59:34,153 Relaxation took 134.3s 2024-12-05 10:59:34,154 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.1 pTM=0.519 ipTM=0.226 2024-12-05 10:59:35,898 Done