2024-12-05 10:39:18,688 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 10:39:19,004 Running on GPU
2024-12-05 10:39:22,599 Found 6 citations for tools or databases
2024-12-05 10:39:22,599 Query 1/1: DCAF13_TPX2 (length 1192)
2024-12-05 10:39:22,884 Sleeping for 9s. Reason: PENDING
2024-12-05 10:39:32,152 Sleeping for 6s. Reason: RUNNING
2024-12-05 10:39:38,412 Sleeping for 6s. Reason: RUNNING
2024-12-05 10:39:44,663 Sleeping for 9s. Reason: RUNNING
2024-12-05 10:39:53,932 Sleeping for 6s. Reason: RUNNING
2024-12-05 10:40:00,184 Sleeping for 9s. Reason: RUNNING
2024-12-05 10:40:09,449 Sleeping for 6s. Reason: RUNNING
2024-12-05 10:40:15,705 Sleeping for 9s. Reason: RUNNING
2024-12-05 10:40:24,962 Sleeping for 6s. Reason: RUNNING
2024-12-05 10:40:31,224 Sleeping for 7s. Reason: RUNNING
2024-12-05 10:40:38,480 Sleeping for 7s. Reason: RUNNING
2024-12-05 10:40:45,737 Sleeping for 5s. Reason: RUNNING
2024-12-05 10:40:50,995 Sleeping for 7s. Reason: RUNNING
2024-12-05 10:40:58,252 Sleeping for 10s. Reason: RUNNING
2024-12-05 10:41:08,509 Sleeping for 9s. Reason: RUNNING
2024-12-05 10:41:17,782 Sleeping for 6s. Reason: RUNNING
2024-12-05 10:41:24,046 Sleeping for 6s. Reason: RUNNING
2024-12-05 10:41:31,601 Sleeping for 7s. Reason: PENDING
2024-12-05 10:41:38,865 Sleeping for 6s. Reason: RUNNING
2024-12-05 10:41:45,127 Sleeping for 6s. Reason: RUNNING
2024-12-05 10:41:51,389 Sleeping for 9s. Reason: RUNNING
2024-12-05 10:42:00,650 Sleeping for 5s. Reason: RUNNING
2024-12-05 10:42:05,907 Sleeping for 6s. Reason: RUNNING
2024-12-05 10:42:12,171 Sleeping for 10s. Reason: RUNNING
2024-12-05 10:42:22,437 Sleeping for 7s. Reason: RUNNING
2024-12-05 10:42:29,849 Sleeping for 5s. Reason: RUNNING
2024-12-05 10:42:35,107 Sleeping for 9s. Reason: RUNNING
2024-12-05 10:42:46,646 Setting max_seq=508, max_extra_seq=2048
2024-12-05 10:45:14,425 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.2 pTM=0.407 ipTM=0.144
2024-12-05 10:45:46,767 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=52.9 pTM=0.413 ipTM=0.19 tol=13.6
2024-12-05 10:46:19,165 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=52.7 pTM=0.412 ipTM=0.171 tol=8.65
2024-12-05 10:46:51,611 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53 pTM=0.413 ipTM=0.185 tol=4.59
2024-12-05 10:47:24,109 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=52.5 pTM=0.413 ipTM=0.16 tol=5.85
2024-12-05 10:47:56,623 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=52.5 pTM=0.411 ipTM=0.154 tol=4.4
2024-12-05 10:48:29,171 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.6 pTM=0.412 ipTM=0.155 tol=3.82
2024-12-05 10:49:01,697 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.9 pTM=0.412 ipTM=0.166 tol=5.93
2024-12-05 10:49:34,227 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.4 pTM=0.415 ipTM=0.242 tol=9.02
2024-12-05 10:50:06,779 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.7 pTM=0.413 ipTM=0.167 tol=5.95
2024-12-05 10:50:39,293 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.2 pTM=0.413 ipTM=0.169 tol=3.57
2024-12-05 10:51:11,832 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.9 pTM=0.413 ipTM=0.176 tol=2.92
2024-12-05 10:51:44,385 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53 pTM=0.413 ipTM=0.159 tol=4.43
2024-12-05 10:52:16,927 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53 pTM=0.415 ipTM=0.249 tol=6.89
2024-12-05 10:52:49,456 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53 pTM=0.412 ipTM=0.169 tol=4.88
2024-12-05 10:53:22,044 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.2 pTM=0.411 ipTM=0.159 tol=3.67
2024-12-05 10:53:54,575 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=53.2 pTM=0.413 ipTM=0.192 tol=3.96
2024-12-05 10:54:27,105 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.2 pTM=0.413 ipTM=0.182 tol=2.3
2024-12-05 10:54:59,626 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=53.2 pTM=0.415 ipTM=0.226 tol=3.77
2024-12-05 10:55:32,140 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.4 pTM=0.414 ipTM=0.18 tol=3.03
2024-12-05 10:56:04,670 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.3 pTM=0.415 ipTM=0.18 tol=2.16
2024-12-05 10:56:37,193 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.2 pTM=0.414 ipTM=0.177 tol=2.03
2024-12-05 10:57:09,712 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=53 pTM=0.413 ipTM=0.192 tol=3.02
2024-12-05 10:57:42,247 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.9 pTM=0.415 ipTM=0.186 tol=4.12
2024-12-05 10:58:14,778 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.9 pTM=0.414 ipTM=0.202 tol=3.09
2024-12-05 10:58:47,284 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.3 pTM=0.412 ipTM=0.171 tol=3.37
2024-12-05 10:59:19,849 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53.2 pTM=0.413 ipTM=0.168 tol=3.21
2024-12-05 10:59:52,368 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53 pTM=0.413 ipTM=0.159 tol=2.81
2024-12-05 11:00:24,902 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.2 pTM=0.413 ipTM=0.156 tol=3.62
2024-12-05 11:00:57,423 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53.1 pTM=0.413 ipTM=0.163 tol=2.71
2024-12-05 11:01:29,944 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.3 pTM=0.414 ipTM=0.162 tol=2.9
2024-12-05 11:01:29,945 alphafold2_multimer_v3_model_1_seed_000 took 1118.2s (30 recycles)
2024-12-05 11:02:03,410 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.1 pTM=0.416 ipTM=0.179
2024-12-05 11:02:35,996 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.8 pTM=0.42 ipTM=0.209 tol=14.9
2024-12-05 11:03:08,646 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.2 pTM=0.419 ipTM=0.196 tol=11.9
2024-12-05 11:03:41,257 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52.2 pTM=0.419 ipTM=0.192 tol=7.71
2024-12-05 11:04:13,893 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.1 pTM=0.42 ipTM=0.196 tol=8.02
2024-12-05 11:04:46,508 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.3 pTM=0.421 ipTM=0.205 tol=5
2024-12-05 11:05:19,158 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.4 pTM=0.419 ipTM=0.205 tol=4.34
2024-12-05 11:05:51,846 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.9 pTM=0.416 ipTM=0.198 tol=21.2
2024-12-05 11:06:24,534 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.1 pTM=0.418 ipTM=0.197 tol=11
2024-12-05 11:06:57,217 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.5 pTM=0.426 ipTM=0.275 tol=9.48
2024-12-05 11:07:29,858 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52 pTM=0.425 ipTM=0.272 tol=4.85
2024-12-05 11:08:02,541 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.9 pTM=0.433 ipTM=0.397 tol=6.02
2024-12-05 11:08:35,165 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.3 pTM=0.438 ipTM=0.49 tol=6.92
2024-12-05 11:09:07,793 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.8 pTM=0.441 ipTM=0.536 tol=6.2
2024-12-05 11:09:40,402 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.8 pTM=0.441 ipTM=0.537 tol=5.77
2024-12-05 11:10:13,038 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.6 pTM=0.439 ipTM=0.518 tol=5.23
2024-12-05 11:10:45,675 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.5 pTM=0.438 ipTM=0.497 tol=3.35
2024-12-05 11:11:18,297 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.8 pTM=0.441 ipTM=0.545 tol=3.24
2024-12-05 11:11:50,912 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.6 pTM=0.441 ipTM=0.542 tol=2.5
2024-12-05 11:12:23,513 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.9 pTM=0.44 ipTM=0.547 tol=2.82
2024-12-05 11:12:56,135 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.9 pTM=0.441 ipTM=0.543 tol=4.51
2024-12-05 11:13:28,806 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.8 pTM=0.438 ipTM=0.498 tol=2.95
2024-12-05 11:14:01,415 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.1 pTM=0.438 ipTM=0.519 tol=2.88
2024-12-05 11:14:34,028 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.7 pTM=0.435 ipTM=0.481 tol=2.23
2024-12-05 11:15:06,648 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.2 pTM=0.432 ipTM=0.427 tol=2.12
2024-12-05 11:15:39,227 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.2 pTM=0.435 ipTM=0.479 tol=3.34
2024-12-05 11:16:11,812 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.1 pTM=0.436 ipTM=0.476 tol=2.25
2024-12-05 11:16:44,428 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.3 pTM=0.44 ipTM=0.542 tol=2.21
2024-12-05 11:17:17,051 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.3 pTM=0.439 ipTM=0.519 tol=2.38
2024-12-05 11:17:49,674 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.4 pTM=0.44 ipTM=0.547 tol=2.04
2024-12-05 11:18:22,310 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.2 pTM=0.437 ipTM=0.499 tol=2.65
2024-12-05 11:18:22,311 alphafold2_multimer_v3_model_2_seed_000 took 1011.5s (30 recycles)
2024-12-05 11:18:55,939 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51.3 pTM=0.414 ipTM=0.162
2024-12-05 11:19:28,691 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=50.7 pTM=0.417 ipTM=0.193 tol=17.4
2024-12-05 11:20:01,418 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=50.9 pTM=0.417 ipTM=0.186 tol=10.9
2024-12-05 11:20:34,095 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.9 pTM=0.421 ipTM=0.179 tol=12.4
2024-12-05 11:21:06,726 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.9 pTM=0.42 ipTM=0.166 tol=5.84
2024-12-05 11:21:39,352 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.4 pTM=0.424 ipTM=0.17 tol=5.15
2024-12-05 11:22:11,965 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.7 pTM=0.425 ipTM=0.172 tol=4.92
2024-12-05 11:22:44,595 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.3 pTM=0.425 ipTM=0.179 tol=5.46
2024-12-05 11:23:17,210 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.5 pTM=0.424 ipTM=0.182 tol=3.54
2024-12-05 11:23:49,800 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.4 pTM=0.428 ipTM=0.202 tol=4.65
2024-12-05 11:24:22,395 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52 pTM=0.427 ipTM=0.229 tol=5.07
2024-12-05 11:24:54,972 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.3 pTM=0.432 ipTM=0.24 tol=5.13
2024-12-05 11:25:27,546 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.6 pTM=0.433 ipTM=0.317 tol=6.6
2024-12-05 11:26:00,084 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=52.9 pTM=0.437 ipTM=0.33 tol=4.29
2024-12-05 11:26:32,617 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.2 pTM=0.439 ipTM=0.395 tol=3.5
2024-12-05 11:27:05,162 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.2 pTM=0.44 ipTM=0.4 tol=2.67
2024-12-05 11:27:37,742 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53 pTM=0.438 ipTM=0.417 tol=3.46
2024-12-05 11:28:10,269 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.5 pTM=0.445 ipTM=0.449 tol=3.54
2024-12-05 11:28:42,805 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.4 pTM=0.446 ipTM=0.442 tol=2.76
2024-12-05 11:29:15,320 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.6 pTM=0.448 ipTM=0.45 tol=2.54
2024-12-05 11:29:47,842 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.6 pTM=0.448 ipTM=0.46 tol=2.85
2024-12-05 11:30:20,371 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.7 pTM=0.449 ipTM=0.457 tol=2.06
2024-12-05 11:30:52,896 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.8 pTM=0.448 ipTM=0.447 tol=1.59
2024-12-05 11:31:25,426 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.2 pTM=0.447 ipTM=0.454 tol=1.7
2024-12-05 11:31:57,957 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.5 pTM=0.447 ipTM=0.44 tol=1.51
2024-12-05 11:32:30,479 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.3 pTM=0.449 ipTM=0.458 tol=1.56
2024-12-05 11:33:02,985 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54 pTM=0.451 ipTM=0.484 tol=1.08
2024-12-05 11:33:35,480 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.8 pTM=0.448 ipTM=0.454 tol=1.56
2024-12-05 11:34:07,955 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.1 pTM=0.451 ipTM=0.46 tol=1.73
2024-12-05 11:34:40,464 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.3 pTM=0.444 ipTM=0.434 tol=2.88
2024-12-05 11:35:12,960 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.6 pTM=0.449 ipTM=0.457 tol=2.65
2024-12-05 11:35:12,961 alphafold2_multimer_v3_model_3_seed_000 took 1009.8s (30 recycles)
2024-12-05 11:35:46,623 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.2 pTM=0.401 ipTM=0.222
2024-12-05 11:36:19,443 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.6 pTM=0.402 ipTM=0.219 tol=18.4
2024-12-05 11:36:52,215 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.9 pTM=0.4 ipTM=0.237 tol=10.2
2024-12-05 11:37:24,988 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.7 pTM=0.403 ipTM=0.219 tol=8.34
2024-12-05 11:37:57,750 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.9 pTM=0.406 ipTM=0.199 tol=11.4
2024-12-05 11:38:30,523 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.8 pTM=0.406 ipTM=0.199 tol=12.3
2024-12-05 11:39:03,327 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49 pTM=0.407 ipTM=0.19 tol=9.65
2024-12-05 11:39:36,191 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.4 pTM=0.407 ipTM=0.205 tol=17.7
2024-12-05 11:40:09,043 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.2 pTM=0.405 ipTM=0.203 tol=10.5
2024-12-05 11:40:41,882 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.4 pTM=0.408 ipTM=0.202 tol=9.63
2024-12-05 11:41:14,683 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.1 pTM=0.408 ipTM=0.211 tol=9.25
2024-12-05 11:41:47,540 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.3 pTM=0.408 ipTM=0.225 tol=10.5
2024-12-05 11:42:20,345 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.6 pTM=0.408 ipTM=0.234 tol=8.64
2024-12-05 11:42:53,151 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.6 pTM=0.407 ipTM=0.23 tol=5.11
2024-12-05 11:43:25,957 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.5 pTM=0.408 ipTM=0.225 tol=6.42
2024-12-05 11:43:58,783 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.6 pTM=0.409 ipTM=0.225 tol=3.95
2024-12-05 11:44:31,605 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.6 pTM=0.408 ipTM=0.228 tol=5.48
2024-12-05 11:45:04,440 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.7 pTM=0.408 ipTM=0.216 tol=7.07
2024-12-05 11:45:37,236 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.7 pTM=0.409 ipTM=0.225 tol=6.25
2024-12-05 11:46:10,043 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.7 pTM=0.41 ipTM=0.24 tol=14
2024-12-05 11:46:42,836 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49 pTM=0.412 ipTM=0.243 tol=5.75
2024-12-05 11:47:15,648 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.4 pTM=0.407 ipTM=0.218 tol=4.46
2024-12-05 11:47:48,487 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.3 pTM=0.406 ipTM=0.216 tol=12.8
2024-12-05 11:48:21,315 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.4 pTM=0.407 ipTM=0.201 tol=9.14
2024-12-05 11:48:54,124 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.4 pTM=0.407 ipTM=0.171 tol=6.26
2024-12-05 11:49:26,900 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.7 pTM=0.406 ipTM=0.183 tol=5.37
2024-12-05 11:49:59,673 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.4 pTM=0.407 ipTM=0.192 tol=5.54
2024-12-05 11:50:32,483 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.5 pTM=0.409 ipTM=0.207 tol=5.57
2024-12-05 11:51:05,283 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.2 pTM=0.408 ipTM=0.205 tol=5.46
2024-12-05 11:51:38,111 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.3 pTM=0.409 ipTM=0.223 tol=5.99
2024-12-05 11:52:10,959 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48 pTM=0.408 ipTM=0.224 tol=4.77
2024-12-05 11:52:10,960 alphafold2_multimer_v3_model_4_seed_000 took 1017.1s (30 recycles)
2024-12-05 11:52:44,665 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48.4 pTM=0.405 ipTM=0.159
2024-12-05 11:53:17,531 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=48.9 pTM=0.405 ipTM=0.152 tol=17.8
2024-12-05 11:53:50,322 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=49.8 pTM=0.411 ipTM=0.224 tol=17.5
2024-12-05 11:54:23,075 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.3 pTM=0.414 ipTM=0.198 tol=6.6
2024-12-05 11:54:55,817 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.4 pTM=0.414 ipTM=0.204 tol=7.49
2024-12-05 11:55:28,579 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.7 pTM=0.414 ipTM=0.178 tol=5.39
2024-12-05 11:56:01,368 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=50.6 pTM=0.413 ipTM=0.166 tol=7.59
2024-12-05 11:56:34,171 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=50.6 pTM=0.413 ipTM=0.154 tol=6.75
2024-12-05 11:57:06,939 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=50.4 pTM=0.412 ipTM=0.155 tol=7.8
2024-12-05 11:57:39,738 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.3 pTM=0.413 ipTM=0.154 tol=4.93
2024-12-05 11:58:12,504 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.7 pTM=0.413 ipTM=0.157 tol=3.76
2024-12-05 11:58:45,246 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50 pTM=0.413 ipTM=0.156 tol=3.46
2024-12-05 11:59:18,001 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=50.3 pTM=0.412 ipTM=0.149 tol=5.21
2024-12-05 11:59:50,767 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.8 pTM=0.412 ipTM=0.15 tol=2.97
2024-12-05 12:00:23,513 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=50.7 pTM=0.412 ipTM=0.147 tol=4.88
2024-12-05 12:00:56,281 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=50.7 pTM=0.412 ipTM=0.145 tol=3.55
2024-12-05 12:01:29,060 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=50.2 pTM=0.412 ipTM=0.146 tol=3.79
2024-12-05 12:02:01,850 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.3 pTM=0.412 ipTM=0.153 tol=2.77
2024-12-05 12:02:34,621 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.3 pTM=0.413 ipTM=0.147 tol=3.17
2024-12-05 12:03:07,441 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50.2 pTM=0.41 ipTM=0.148 tol=7.06
2024-12-05 12:03:40,239 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.9 pTM=0.412 ipTM=0.15 tol=5.48
2024-12-05 12:04:13,028 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50.3 pTM=0.412 ipTM=0.149 tol=4.89
2024-12-05 12:04:45,778 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.8 pTM=0.412 ipTM=0.154 tol=5.96
2024-12-05 12:05:18,551 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.3 pTM=0.413 ipTM=0.158 tol=3.28
2024-12-05 12:05:51,293 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.5 pTM=0.413 ipTM=0.156 tol=4.43
2024-12-05 12:06:24,017 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=51.1 pTM=0.413 ipTM=0.157 tol=5.57
2024-12-05 12:06:56,733 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.6 pTM=0.415 ipTM=0.176 tol=4.32
2024-12-05 12:07:29,456 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.9 pTM=0.414 ipTM=0.169 tol=4.58
2024-12-05 12:08:02,165 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.9 pTM=0.416 ipTM=0.179 tol=4.87
2024-12-05 12:08:34,900 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.9 pTM=0.415 ipTM=0.177 tol=4
2024-12-05 12:09:07,642 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.5 pTM=0.416 ipTM=0.196 tol=1.68
2024-12-05 12:09:07,643 alphafold2_multimer_v3_model_5_seed_000 took 1015.8s (30 recycles)
2024-12-05 12:09:08,505 reranking models by 'multimer' metric
2024-12-05 12:09:12,251 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 12:11:04,115 Relaxation took 115.6s
2024-12-05 12:11:04,115 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.2 pTM=0.437 ipTM=0.499
2024-12-05 12:12:38,327 Relaxation took 94.2s
2024-12-05 12:12:38,327 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.6 pTM=0.449 ipTM=0.457
2024-12-05 12:15:15,008 Relaxation took 156.7s
2024-12-05 12:15:15,008 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48 pTM=0.408 ipTM=0.224
2024-12-05 12:16:43,727 Relaxation took 88.7s
2024-12-05 12:16:43,728 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.5 pTM=0.416 ipTM=0.196
2024-12-05 12:18:46,020 Relaxation took 122.3s
2024-12-05 12:18:46,020 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.3 pTM=0.414 ipTM=0.162
2024-12-05 12:18:48,356 Done