2024-12-05 11:06:58,920 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 11:06:59,212 Running on GPU
2024-12-05 11:07:03,080 Found 6 citations for tools or databases
2024-12-05 11:07:03,080 Query 1/1: DCAF4_HSPD1 (length 1068)
2024-12-05 11:07:03,375 Sleeping for 6s. Reason: PENDING
2024-12-05 11:07:09,633 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:07:17,892 Sleeping for 10s. Reason: RUNNING
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2024-12-05 11:07:52,929 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:08:02,204 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:08:11,457 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:08:17,716 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:08:22,970 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:08:29,223 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:08:38,490 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:08:43,742 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:08:49,004 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:08:58,268 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:09:07,528 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:09:16,793 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:09:26,052 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:09:31,309 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:09:43,595 Sleeping for 9s. Reason: PENDING
2024-12-05 11:09:52,855 Sleeping for 8s. Reason: PENDING
2024-12-05 11:10:01,112 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:10:11,369 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:10:20,627 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:10:28,898 Sleeping for 7s. Reason: RUNNING
2024-12-05 11:10:36,155 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:10:45,415 Sleeping for 7s. Reason: RUNNING
2024-12-05 11:10:52,669 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:10:57,934 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:11:07,198 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:11:17,461 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:11:26,723 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:11:35,982 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:11:42,235 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:11:47,489 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:11:59,484 Setting max_seq=508, max_extra_seq=2048
2024-12-05 11:14:33,590 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70.9 pTM=0.44 ipTM=0.163
2024-12-05 11:14:59,660 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.5 pTM=0.441 ipTM=0.168 tol=3.84
2024-12-05 11:15:25,876 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.1 pTM=0.428 ipTM=0.15 tol=3.57
2024-12-05 11:15:52,131 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.7 pTM=0.43 ipTM=0.159 tol=3.16
2024-12-05 11:16:18,455 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.5 pTM=0.425 ipTM=0.154 tol=3.93
2024-12-05 11:16:44,826 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.9 pTM=0.426 ipTM=0.156 tol=2.91
2024-12-05 11:17:11,210 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.2 pTM=0.429 ipTM=0.157 tol=2.59
2024-12-05 11:17:37,597 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.7 pTM=0.43 ipTM=0.156 tol=3.44
2024-12-05 11:18:04,022 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.4 pTM=0.428 ipTM=0.153 tol=3.91
2024-12-05 11:18:30,441 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.6 pTM=0.428 ipTM=0.155 tol=1.92
2024-12-05 11:18:56,894 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.6 pTM=0.428 ipTM=0.151 tol=4.05
2024-12-05 11:19:23,341 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.7 pTM=0.431 ipTM=0.157 tol=3.84
2024-12-05 11:19:49,757 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.9 pTM=0.433 ipTM=0.159 tol=1.93
2024-12-05 11:20:16,130 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.7 pTM=0.434 ipTM=0.163 tol=1.71
2024-12-05 11:20:42,533 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.6 pTM=0.433 ipTM=0.164 tol=3.11
2024-12-05 11:21:08,903 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.8 pTM=0.432 ipTM=0.161 tol=1.43
2024-12-05 11:21:35,318 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.9 pTM=0.434 ipTM=0.166 tol=1.44
2024-12-05 11:22:01,715 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.9 pTM=0.433 ipTM=0.164 tol=3.66
2024-12-05 11:22:28,129 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.9 pTM=0.432 ipTM=0.162 tol=1.94
2024-12-05 11:22:54,523 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.5 pTM=0.432 ipTM=0.161 tol=2.22
2024-12-05 11:23:20,923 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.4 pTM=0.431 ipTM=0.161 tol=2.38
2024-12-05 11:23:47,325 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.8 pTM=0.433 ipTM=0.161 tol=2.12
2024-12-05 11:24:13,759 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.5 pTM=0.433 ipTM=0.162 tol=2.61
2024-12-05 11:24:40,194 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.4 pTM=0.434 ipTM=0.157 tol=1.86
2024-12-05 11:25:06,645 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.7 pTM=0.431 ipTM=0.157 tol=3.43
2024-12-05 11:25:33,041 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.1 pTM=0.431 ipTM=0.158 tol=2.27
2024-12-05 11:25:59,458 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.7 pTM=0.43 ipTM=0.159 tol=1.97
2024-12-05 11:26:25,862 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.9 pTM=0.43 ipTM=0.158 tol=1.84
2024-12-05 11:26:52,277 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.7 pTM=0.433 ipTM=0.162 tol=2.61
2024-12-05 11:27:18,676 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.8 pTM=0.43 ipTM=0.16 tol=2.62
2024-12-05 11:27:45,082 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.2 pTM=0.434 ipTM=0.165 tol=2.15
2024-12-05 11:27:45,083 alphafold2_multimer_v3_model_1_seed_000 took 940.1s (30 recycles)
2024-12-05 11:28:12,151 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.2 pTM=0.444 ipTM=0.159
2024-12-05 11:28:38,537 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.3 pTM=0.448 ipTM=0.166 tol=7.64
2024-12-05 11:29:04,922 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.7 pTM=0.445 ipTM=0.162 tol=3.97
2024-12-05 11:29:31,315 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.4 pTM=0.442 ipTM=0.157 tol=4.75
2024-12-05 11:29:57,681 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.6 pTM=0.443 ipTM=0.158 tol=1.19
2024-12-05 11:30:24,061 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.6 pTM=0.442 ipTM=0.16 tol=1.28
2024-12-05 11:30:50,430 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.6 pTM=0.442 ipTM=0.161 tol=1.67
2024-12-05 11:31:16,801 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.6 pTM=0.443 ipTM=0.162 tol=1.39
2024-12-05 11:31:43,182 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.8 pTM=0.445 ipTM=0.177 tol=0.919
2024-12-05 11:32:09,555 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74 pTM=0.445 ipTM=0.178 tol=1.97
2024-12-05 11:32:35,958 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.1 pTM=0.443 ipTM=0.161 tol=2.91
2024-12-05 11:33:02,369 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.9 pTM=0.446 ipTM=0.195 tol=2.55
2024-12-05 11:33:28,785 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.2 pTM=0.447 ipTM=0.175 tol=1.8
2024-12-05 11:33:55,203 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.3 pTM=0.448 ipTM=0.181 tol=1.15
2024-12-05 11:34:21,610 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.1 pTM=0.447 ipTM=0.183 tol=1.34
2024-12-05 11:34:48,036 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.2 pTM=0.447 ipTM=0.191 tol=1.84
2024-12-05 11:35:14,470 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.3 pTM=0.446 ipTM=0.182 tol=1.16
2024-12-05 11:35:40,905 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.6 pTM=0.448 ipTM=0.185 tol=0.925
2024-12-05 11:36:07,359 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.5 pTM=0.446 ipTM=0.186 tol=0.605
2024-12-05 11:36:33,824 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.1 pTM=0.443 ipTM=0.169 tol=1.18
2024-12-05 11:37:00,274 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.2 pTM=0.443 ipTM=0.162 tol=1.14
2024-12-05 11:37:26,721 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.4 pTM=0.445 ipTM=0.174 tol=0.809
2024-12-05 11:37:53,161 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.3 pTM=0.443 ipTM=0.167 tol=1.34
2024-12-05 11:38:19,618 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.8 pTM=0.445 ipTM=0.157 tol=1.18
2024-12-05 11:38:46,077 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.8 pTM=0.443 ipTM=0.157 tol=1.49
2024-12-05 11:39:12,505 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.8 pTM=0.445 ipTM=0.156 tol=1.56
2024-12-05 11:39:38,955 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.5 pTM=0.444 ipTM=0.158 tol=1.38
2024-12-05 11:40:05,397 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.2 pTM=0.442 ipTM=0.159 tol=1.87
2024-12-05 11:40:31,812 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.3 pTM=0.444 ipTM=0.158 tol=1.5
2024-12-05 11:40:58,226 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.8 pTM=0.441 ipTM=0.156 tol=1.31
2024-12-05 11:41:24,642 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.9 pTM=0.443 ipTM=0.156 tol=1.38
2024-12-05 11:41:24,643 alphafold2_multimer_v3_model_2_seed_000 took 818.9s (30 recycles)
2024-12-05 11:41:51,797 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.9 pTM=0.434 ipTM=0.148
2024-12-05 11:42:18,217 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.9 pTM=0.435 ipTM=0.158 tol=12.9
2024-12-05 11:42:44,666 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.4 pTM=0.423 ipTM=0.146 tol=10.1
2024-12-05 11:43:11,121 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72.1 pTM=0.433 ipTM=0.143 tol=10.8
2024-12-05 11:43:37,593 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.1 pTM=0.429 ipTM=0.142 tol=3.13
2024-12-05 11:44:04,076 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.9 pTM=0.432 ipTM=0.146 tol=5.91
2024-12-05 11:44:30,549 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.4 pTM=0.436 ipTM=0.147 tol=3.95
2024-12-05 11:44:57,021 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.6 pTM=0.44 ipTM=0.145 tol=3.21
2024-12-05 11:45:23,510 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.3 pTM=0.437 ipTM=0.148 tol=2.56
2024-12-05 11:45:49,978 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.2 pTM=0.439 ipTM=0.145 tol=3.04
2024-12-05 11:46:16,440 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.6 pTM=0.444 ipTM=0.155 tol=11.1
2024-12-05 11:46:42,895 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.6 pTM=0.443 ipTM=0.144 tol=7.37
2024-12-05 11:47:09,372 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.6 pTM=0.447 ipTM=0.149 tol=4.03
2024-12-05 11:47:35,843 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.5 pTM=0.447 ipTM=0.148 tol=1.92
2024-12-05 11:48:02,287 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.4 pTM=0.447 ipTM=0.15 tol=1.33
2024-12-05 11:48:28,728 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72.4 pTM=0.447 ipTM=0.148 tol=1.49
2024-12-05 11:48:55,208 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.2 pTM=0.439 ipTM=0.146 tol=3.71
2024-12-05 11:49:21,658 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72.2 pTM=0.444 ipTM=0.145 tol=2.82
2024-12-05 11:49:48,127 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72.2 pTM=0.437 ipTM=0.147 tol=2.67
2024-12-05 11:50:14,575 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.2 pTM=0.442 ipTM=0.144 tol=2.94
2024-12-05 11:50:41,045 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.6 pTM=0.438 ipTM=0.144 tol=14.2
2024-12-05 11:51:07,526 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.2 pTM=0.438 ipTM=0.142 tol=12.1
2024-12-05 11:51:33,972 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.4 pTM=0.439 ipTM=0.141 tol=5.59
2024-12-05 11:52:00,404 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.7 pTM=0.444 ipTM=0.141 tol=3.81
2024-12-05 11:52:26,848 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.5 pTM=0.439 ipTM=0.144 tol=3.49
2024-12-05 11:52:53,273 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72.6 pTM=0.444 ipTM=0.141 tol=4.86
2024-12-05 11:53:19,726 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.8 pTM=0.436 ipTM=0.141 tol=13.5
2024-12-05 11:53:46,197 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.2 pTM=0.435 ipTM=0.145 tol=10.8
2024-12-05 11:54:12,626 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.6 pTM=0.442 ipTM=0.143 tol=4.88
2024-12-05 11:54:39,066 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72 pTM=0.442 ipTM=0.139 tol=2.62
2024-12-05 11:55:05,541 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.2 pTM=0.434 ipTM=0.147 tol=11.8
2024-12-05 11:55:05,541 alphafold2_multimer_v3_model_3_seed_000 took 820.2s (30 recycles)
2024-12-05 11:55:32,632 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=71.3 pTM=0.439 ipTM=0.181
2024-12-05 11:55:59,045 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.1 pTM=0.438 ipTM=0.17 tol=7.09
2024-12-05 11:56:25,446 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.7 pTM=0.433 ipTM=0.162 tol=3.89
2024-12-05 11:56:51,853 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.2 pTM=0.431 ipTM=0.156 tol=3.29
2024-12-05 11:57:18,266 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.8 pTM=0.427 ipTM=0.151 tol=2.34
2024-12-05 11:57:44,676 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.4 pTM=0.425 ipTM=0.152 tol=2.41
2024-12-05 11:58:11,100 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.6 pTM=0.429 ipTM=0.149 tol=2.6
2024-12-05 11:58:37,554 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.6 pTM=0.428 ipTM=0.148 tol=3.68
2024-12-05 11:59:04,039 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.9 pTM=0.427 ipTM=0.152 tol=2.62
2024-12-05 11:59:30,514 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.9 pTM=0.428 ipTM=0.148 tol=1.18
2024-12-05 11:59:56,962 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.6 pTM=0.427 ipTM=0.151 tol=3.15
2024-12-05 12:00:23,447 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.9 pTM=0.43 ipTM=0.148 tol=2.9
2024-12-05 12:00:49,934 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.9 pTM=0.427 ipTM=0.15 tol=0.886
2024-12-05 12:01:16,421 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.6 pTM=0.425 ipTM=0.148 tol=3.92
2024-12-05 12:01:42,905 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.9 pTM=0.429 ipTM=0.151 tol=4.48
2024-12-05 12:02:09,376 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.3 pTM=0.424 ipTM=0.147 tol=3.1
2024-12-05 12:02:35,869 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.3 pTM=0.429 ipTM=0.153 tol=3.77
2024-12-05 12:03:02,350 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.1 pTM=0.427 ipTM=0.154 tol=4.68
2024-12-05 12:03:28,825 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.9 pTM=0.426 ipTM=0.153 tol=2.96
2024-12-05 12:03:55,302 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.9 pTM=0.42 ipTM=0.152 tol=2.34
2024-12-05 12:04:21,771 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.6 pTM=0.423 ipTM=0.15 tol=1.16
2024-12-05 12:04:48,243 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.3 pTM=0.422 ipTM=0.148 tol=2.26
2024-12-05 12:05:14,716 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.4 pTM=0.423 ipTM=0.147 tol=2.17
2024-12-05 12:05:41,195 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.5 pTM=0.425 ipTM=0.147 tol=1.65
2024-12-05 12:06:07,673 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.5 pTM=0.424 ipTM=0.15 tol=2.04
2024-12-05 12:06:34,181 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.6 pTM=0.427 ipTM=0.15 tol=2.21
2024-12-05 12:07:00,635 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.4 pTM=0.423 ipTM=0.151 tol=2.55
2024-12-05 12:07:27,088 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.3 pTM=0.427 ipTM=0.15 tol=2.27
2024-12-05 12:07:53,598 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.5 pTM=0.425 ipTM=0.15 tol=2.63
2024-12-05 12:08:20,044 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.9 pTM=0.422 ipTM=0.148 tol=2.49
2024-12-05 12:08:46,519 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.7 pTM=0.422 ipTM=0.147 tol=1.96
2024-12-05 12:08:46,520 alphafold2_multimer_v3_model_4_seed_000 took 820.3s (30 recycles)
2024-12-05 12:09:13,655 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.4 pTM=0.44 ipTM=0.15
2024-12-05 12:09:40,109 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.7 pTM=0.442 ipTM=0.151 tol=3.89
2024-12-05 12:10:06,588 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.9 pTM=0.445 ipTM=0.148 tol=3
2024-12-05 12:10:33,089 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.8 pTM=0.449 ipTM=0.158 tol=3.61
2024-12-05 12:10:59,594 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.2 pTM=0.452 ipTM=0.151 tol=3.71
2024-12-05 12:11:26,079 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.7 pTM=0.453 ipTM=0.153 tol=1.05
2024-12-05 12:11:52,563 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.4 pTM=0.454 ipTM=0.147 tol=3.06
2024-12-05 12:12:19,039 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.1 pTM=0.457 ipTM=0.151 tol=3.42
2024-12-05 12:12:45,507 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.2 pTM=0.454 ipTM=0.145 tol=3.27
2024-12-05 12:13:12,006 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.2 pTM=0.457 ipTM=0.149 tol=2.47
2024-12-05 12:13:38,505 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.6 pTM=0.445 ipTM=0.144 tol=4.73
2024-12-05 12:14:04,986 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.2 pTM=0.458 ipTM=0.147 tol=3.47
2024-12-05 12:14:31,497 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.7 pTM=0.445 ipTM=0.144 tol=4.86
2024-12-05 12:14:57,994 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.1 pTM=0.458 ipTM=0.147 tol=3.84
2024-12-05 12:15:24,500 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.2 pTM=0.45 ipTM=0.144 tol=3.88
2024-12-05 12:15:51,000 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.8 pTM=0.456 ipTM=0.148 tol=4.48
2024-12-05 12:16:17,531 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.1 pTM=0.451 ipTM=0.146 tol=3.77
2024-12-05 12:16:44,012 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.8 pTM=0.457 ipTM=0.149 tol=3.87
2024-12-05 12:17:10,476 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73 pTM=0.45 ipTM=0.145 tol=3.24
2024-12-05 12:17:36,948 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.9 pTM=0.455 ipTM=0.15 tol=2.75
2024-12-05 12:18:03,449 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=73 pTM=0.45 ipTM=0.145 tol=3.8
2024-12-05 12:18:29,921 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.1 pTM=0.453 ipTM=0.146 tol=3.79
2024-12-05 12:18:56,416 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.5 pTM=0.445 ipTM=0.143 tol=3.59
2024-12-05 12:19:22,900 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.9 pTM=0.459 ipTM=0.145 tol=4.47
2024-12-05 12:19:49,387 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.8 pTM=0.449 ipTM=0.141 tol=3.63
2024-12-05 12:20:15,806 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.9 pTM=0.457 ipTM=0.146 tol=3.61
2024-12-05 12:20:42,274 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.7 pTM=0.449 ipTM=0.146 tol=3.66
2024-12-05 12:21:08,750 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.9 pTM=0.455 ipTM=0.146 tol=2.34
2024-12-05 12:21:35,281 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.4 pTM=0.447 ipTM=0.149 tol=3.76
2024-12-05 12:22:01,740 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.5 pTM=0.453 ipTM=0.147 tol=4.43
2024-12-05 12:22:28,258 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72 pTM=0.443 ipTM=0.147 tol=3.06
2024-12-05 12:22:28,259 alphafold2_multimer_v3_model_5_seed_000 took 821.0s (30 recycles)
2024-12-05 12:22:28,960 reranking models by 'multimer' metric
2024-12-05 12:22:33,331 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 12:24:03,158 Relaxation took 94.2s
2024-12-05 12:24:03,159 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.2 pTM=0.434 ipTM=0.165
2024-12-05 12:25:21,574 Relaxation took 78.4s
2024-12-05 12:25:21,574 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.9 pTM=0.443 ipTM=0.156
2024-12-05 12:26:52,189 Relaxation took 90.6s
2024-12-05 12:26:52,189 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72 pTM=0.443 ipTM=0.147
2024-12-05 12:28:09,045 Relaxation took 76.9s
2024-12-05 12:28:09,045 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.2 pTM=0.434 ipTM=0.147
2024-12-05 12:29:18,827 Relaxation took 69.8s
2024-12-05 12:29:18,827 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.7 pTM=0.422 ipTM=0.147
2024-12-05 12:29:20,830 Done