2024-12-05 11:20:45,022 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 11:20:45,327 Running on GPU
2024-12-05 11:20:48,962 Found 6 citations for tools or databases
2024-12-05 11:20:48,962 Query 1/1: DCAF5_NUAK2 (length 1570)
2024-12-05 11:20:49,273 Sleeping for 9s. Reason: PENDING
2024-12-05 11:20:58,681 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:21:07,941 Sleeping for 6s. Reason: RUNNING
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2024-12-05 11:22:50,315 Sleeping for 9s. Reason: RUNNING
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2024-12-05 11:23:58,391 Sleeping for 9s. Reason: RUNNING
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2024-12-05 11:25:06,691 Sleeping for 8s. Reason: RUNNING
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2024-12-05 11:25:20,212 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:25:30,473 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:25:36,727 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:25:44,981 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:25:55,239 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:26:05,185 Sleeping for 6s. Reason: PENDING
2024-12-05 11:26:11,440 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:26:16,696 Sleeping for 7s. Reason: RUNNING
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2024-12-05 11:26:34,208 Sleeping for 5s. Reason: RUNNING
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2024-12-05 11:26:48,726 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:26:54,989 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:27:04,250 Sleeping for 9s. Reason: RUNNING
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2024-12-05 11:27:21,767 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:27:28,028 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:27:34,282 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:27:40,541 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:27:48,806 Sleeping for 7s. Reason: RUNNING
2024-12-05 11:27:56,211 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:28:01,470 Sleeping for 7s. Reason: RUNNING
2024-12-05 11:28:08,729 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:28:17,994 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:28:23,249 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:28:32,506 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:28:42,771 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:28:48,024 Sleeping for 7s. Reason: RUNNING
2024-12-05 11:28:55,279 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:29:03,543 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:29:09,803 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:29:18,061 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:29:27,326 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:29:36,587 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:29:42,838 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:29:56,858 Setting max_seq=508, max_extra_seq=2048
2024-12-05 11:33:43,036 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=45.4 pTM=0.397 ipTM=0.23
2024-12-05 11:34:57,227 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.9 pTM=0.389 ipTM=0.268 tol=22.3
2024-12-05 11:36:11,467 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=46.2 pTM=0.39 ipTM=0.249 tol=11.6
2024-12-05 11:37:25,752 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.8 pTM=0.398 ipTM=0.249 tol=10.9
2024-12-05 11:38:40,089 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.8 pTM=0.399 ipTM=0.347 tol=8.43
2024-12-05 11:39:54,390 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47.3 pTM=0.4 ipTM=0.377 tol=7.23
2024-12-05 11:41:08,678 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=47.1 pTM=0.403 ipTM=0.385 tol=3.59
2024-12-05 11:42:22,982 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47.3 pTM=0.398 ipTM=0.38 tol=3.85
2024-12-05 11:43:37,288 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.1 pTM=0.399 ipTM=0.385 tol=6.66
2024-12-05 11:44:51,638 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.2 pTM=0.393 ipTM=0.385 tol=3.62
2024-12-05 11:46:06,007 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.1 pTM=0.397 ipTM=0.379 tol=6.99
2024-12-05 11:47:20,362 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.3 pTM=0.397 ipTM=0.381 tol=4.97
2024-12-05 11:48:34,753 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.2 pTM=0.401 ipTM=0.392 tol=5.31
2024-12-05 11:49:49,092 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=47.5 pTM=0.401 ipTM=0.393 tol=4
2024-12-05 11:51:03,416 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=47.2 pTM=0.406 ipTM=0.394 tol=4.68
2024-12-05 11:52:17,768 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.5 pTM=0.397 ipTM=0.399 tol=3.79
2024-12-05 11:53:32,046 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.3 pTM=0.404 ipTM=0.394 tol=4
2024-12-05 11:54:46,338 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=47.6 pTM=0.397 ipTM=0.385 tol=7.04
2024-12-05 11:56:00,665 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.3 pTM=0.402 ipTM=0.389 tol=7.41
2024-12-05 11:57:14,944 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.7 pTM=0.401 ipTM=0.388 tol=7.99
2024-12-05 11:58:29,228 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.6 pTM=0.409 ipTM=0.395 tol=10.2
2024-12-05 11:59:43,553 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47.7 pTM=0.399 ipTM=0.386 tol=5.12
2024-12-05 12:00:57,835 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47.4 pTM=0.401 ipTM=0.389 tol=6.54
2024-12-05 12:02:12,161 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.8 pTM=0.401 ipTM=0.39 tol=3.06
2024-12-05 12:03:26,447 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.5 pTM=0.406 ipTM=0.392 tol=3.04
2024-12-05 12:04:40,742 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.7 pTM=0.401 ipTM=0.38 tol=3.58
2024-12-05 12:05:54,996 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47.5 pTM=0.404 ipTM=0.379 tol=3.88
2024-12-05 12:07:09,261 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.8 pTM=0.4 ipTM=0.385 tol=3.12
2024-12-05 12:08:23,521 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.5 pTM=0.403 ipTM=0.396 tol=3.04
2024-12-05 12:09:37,810 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=47.5 pTM=0.397 ipTM=0.392 tol=3.24
2024-12-05 12:10:52,151 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.4 pTM=0.403 ipTM=0.393 tol=7.03
2024-12-05 12:10:52,153 alphafold2_multimer_v3_model_1_seed_000 took 2449.9s (30 recycles)
2024-12-05 12:12:07,882 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.1 pTM=0.394 ipTM=0.329
2024-12-05 12:13:22,352 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=47.1 pTM=0.397 ipTM=0.296 tol=13.9
2024-12-05 12:14:36,773 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47.7 pTM=0.4 ipTM=0.297 tol=9.12
2024-12-05 12:15:51,182 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=47.4 pTM=0.396 ipTM=0.408 tol=6.03
2024-12-05 12:17:05,563 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48 pTM=0.398 ipTM=0.393 tol=11.3
2024-12-05 12:18:19,963 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.7 pTM=0.397 ipTM=0.392 tol=8.18
2024-12-05 12:19:34,398 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.1 pTM=0.398 ipTM=0.402 tol=6.72
2024-12-05 12:20:48,829 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47.7 pTM=0.397 ipTM=0.39 tol=5.7
2024-12-05 12:22:03,265 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=48.2 pTM=0.399 ipTM=0.402 tol=7.39
2024-12-05 12:23:17,683 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.7 pTM=0.398 ipTM=0.394 tol=7.89
2024-12-05 12:24:32,084 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=48.1 pTM=0.398 ipTM=0.392 tol=7.83
2024-12-05 12:25:46,521 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.8 pTM=0.399 ipTM=0.391 tol=7.56
2024-12-05 12:27:00,923 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48 pTM=0.398 ipTM=0.402 tol=3.05
2024-12-05 12:28:15,337 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.6 pTM=0.396 ipTM=0.403 tol=4.77
2024-12-05 12:29:29,785 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48 pTM=0.396 ipTM=0.4 tol=7
2024-12-05 12:30:44,205 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47.6 pTM=0.398 ipTM=0.403 tol=6.97
2024-12-05 12:31:58,630 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.2 pTM=0.4 ipTM=0.399 tol=7.02
2024-12-05 12:33:13,039 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47.7 pTM=0.399 ipTM=0.395 tol=6.6
2024-12-05 12:34:27,455 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.1 pTM=0.396 ipTM=0.395 tol=7.02
2024-12-05 12:35:41,886 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.7 pTM=0.398 ipTM=0.396 tol=2.51
2024-12-05 12:36:56,338 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.2 pTM=0.395 ipTM=0.404 tol=2.5
2024-12-05 12:38:10,750 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47.8 pTM=0.399 ipTM=0.398 tol=2.65
2024-12-05 12:39:25,193 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.1 pTM=0.394 ipTM=0.403 tol=2.88
2024-12-05 12:40:39,607 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.9 pTM=0.401 ipTM=0.404 tol=7.33
2024-12-05 12:41:54,048 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.1 pTM=0.396 ipTM=0.4 tol=6.79
2024-12-05 12:43:08,447 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48 pTM=0.403 ipTM=0.395 tol=6.86
2024-12-05 12:44:22,861 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.1 pTM=0.395 ipTM=0.39 tol=7.05
2024-12-05 12:45:37,260 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.9 pTM=0.4 ipTM=0.407 tol=7.15
2024-12-05 12:46:51,687 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.1 pTM=0.395 ipTM=0.407 tol=6.97
2024-12-05 12:48:06,126 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=47.8 pTM=0.399 ipTM=0.403 tol=6.55
2024-12-05 12:49:20,562 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.1 pTM=0.395 ipTM=0.4 tol=6.74
2024-12-05 12:49:20,564 alphafold2_multimer_v3_model_2_seed_000 took 2306.9s (30 recycles)
2024-12-05 12:50:36,559 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.9 pTM=0.388 ipTM=0.21
2024-12-05 12:51:50,986 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.2 pTM=0.42 ipTM=0.354 tol=12.6
2024-12-05 12:53:05,533 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.1 pTM=0.39 ipTM=0.422 tol=9.6
2024-12-05 12:54:20,196 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.7 pTM=0.389 ipTM=0.403 tol=11
2024-12-05 12:55:34,788 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.3 pTM=0.399 ipTM=0.403 tol=8.19
2024-12-05 12:56:49,395 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.2 pTM=0.395 ipTM=0.405 tol=8.59
2024-12-05 12:58:04,011 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.1 pTM=0.406 ipTM=0.406 tol=5.5
2024-12-05 12:59:18,612 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.4 pTM=0.4 ipTM=0.404 tol=5.02
2024-12-05 13:00:33,243 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.1 pTM=0.396 ipTM=0.415 tol=3.9
2024-12-05 13:01:47,835 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.3 pTM=0.397 ipTM=0.412 tol=4.58
2024-12-05 13:03:02,484 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.1 pTM=0.391 ipTM=0.413 tol=4.09
2024-12-05 13:04:17,106 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.1 pTM=0.396 ipTM=0.409 tol=5.73
2024-12-05 13:05:31,763 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.2 pTM=0.395 ipTM=0.421 tol=4.57
2024-12-05 13:06:46,424 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47 pTM=0.391 ipTM=0.419 tol=3.85
2024-12-05 13:08:01,093 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47 pTM=0.394 ipTM=0.418 tol=4.47
2024-12-05 13:09:15,736 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.3 pTM=0.396 ipTM=0.419 tol=4.06
2024-12-05 13:10:30,396 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=46.9 pTM=0.397 ipTM=0.416 tol=7.07
2024-12-05 13:11:45,015 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.2 pTM=0.395 ipTM=0.408 tol=4.89
2024-12-05 13:12:59,669 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.1 pTM=0.401 ipTM=0.417 tol=5.25
2024-12-05 13:14:14,289 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.3 pTM=0.402 ipTM=0.408 tol=5.61
2024-12-05 13:15:28,955 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47.2 pTM=0.396 ipTM=0.416 tol=3.94
2024-12-05 13:16:43,593 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.2 pTM=0.397 ipTM=0.412 tol=2.48
2024-12-05 13:17:58,252 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47 pTM=0.396 ipTM=0.416 tol=3.3
2024-12-05 13:19:12,849 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.2 pTM=0.4 ipTM=0.411 tol=3.77
2024-12-05 13:20:27,471 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.1 pTM=0.398 ipTM=0.413 tol=4.18
2024-12-05 13:21:42,104 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47 pTM=0.396 ipTM=0.402 tol=2.58
2024-12-05 13:22:56,745 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47 pTM=0.395 ipTM=0.405 tol=3.39
2024-12-05 13:24:11,356 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=47.2 pTM=0.402 ipTM=0.415 tol=5.68
2024-12-05 13:25:25,973 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47.2 pTM=0.401 ipTM=0.416 tol=3.27
2024-12-05 13:26:40,563 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.1 pTM=0.395 ipTM=0.415 tol=3.22
2024-12-05 13:27:55,171 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47 pTM=0.398 ipTM=0.414 tol=3.76
2024-12-05 13:27:55,172 alphafold2_multimer_v3_model_3_seed_000 took 2313.1s (30 recycles)
2024-12-05 13:29:11,179 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.1 pTM=0.447 ipTM=0.358
2024-12-05 13:30:25,736 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=46.3 pTM=0.398 ipTM=0.24 tol=12.9
2024-12-05 13:31:40,360 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46 pTM=0.396 ipTM=0.248 tol=10.8
2024-12-05 13:32:55,032 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.1 pTM=0.387 ipTM=0.297 tol=8.16
2024-12-05 13:34:09,736 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.2 pTM=0.396 ipTM=0.243 tol=6.13
2024-12-05 13:35:24,402 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.4 pTM=0.387 ipTM=0.231 tol=5.95
2024-12-05 13:36:39,122 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46 pTM=0.383 ipTM=0.225 tol=8.24
2024-12-05 13:37:53,820 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.4 pTM=0.385 ipTM=0.234 tol=6.93
2024-12-05 13:39:08,534 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.4 pTM=0.393 ipTM=0.323 tol=4.33
2024-12-05 13:40:23,268 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.4 pTM=0.382 ipTM=0.336 tol=4.55
2024-12-05 13:41:38,056 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=46.2 pTM=0.378 ipTM=0.354 tol=7.22
2024-12-05 13:42:52,692 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.5 pTM=0.382 ipTM=0.327 tol=7.91
2024-12-05 13:44:07,385 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.2 pTM=0.386 ipTM=0.33 tol=7.14
2024-12-05 13:45:22,032 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.3 pTM=0.383 ipTM=0.332 tol=3.46
2024-12-05 13:46:36,741 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.1 pTM=0.385 ipTM=0.338 tol=3.13
2024-12-05 13:47:51,419 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.2 pTM=0.38 ipTM=0.328 tol=3.12
2024-12-05 13:49:06,087 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46 pTM=0.388 ipTM=0.332 tol=2.76
2024-12-05 13:50:20,743 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.4 pTM=0.382 ipTM=0.315 tol=3.37
2024-12-05 13:51:35,421 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.2 pTM=0.384 ipTM=0.331 tol=7.53
2024-12-05 13:52:50,058 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.5 pTM=0.385 ipTM=0.316 tol=5.76
2024-12-05 13:54:04,796 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=46.3 pTM=0.382 ipTM=0.334 tol=5.49
2024-12-05 13:55:19,528 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.2 pTM=0.38 ipTM=0.32 tol=3.73
2024-12-05 13:56:34,220 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.1 pTM=0.383 ipTM=0.334 tol=4.17
2024-12-05 13:57:48,861 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.4 pTM=0.381 ipTM=0.332 tol=3.71
2024-12-05 13:59:03,507 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46.2 pTM=0.384 ipTM=0.34 tol=2.94
2024-12-05 14:00:18,143 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.3 pTM=0.381 ipTM=0.33 tol=3.18
2024-12-05 14:01:32,920 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.1 pTM=0.373 ipTM=0.331 tol=14.9
2024-12-05 14:02:47,689 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46.1 pTM=0.377 ipTM=0.324 tol=9.85
2024-12-05 14:04:02,419 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.2 pTM=0.379 ipTM=0.318 tol=9.39
2024-12-05 14:05:17,125 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.4 pTM=0.382 ipTM=0.329 tol=14
2024-12-05 14:06:31,795 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=46.4 pTM=0.384 ipTM=0.329 tol=7.2
2024-12-05 14:06:31,797 alphafold2_multimer_v3_model_4_seed_000 took 2315.0s (30 recycles)
2024-12-05 14:07:47,790 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.7 pTM=0.425 ipTM=0.305
2024-12-05 14:09:02,395 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.8 pTM=0.398 ipTM=0.224 tol=14
2024-12-05 14:10:17,083 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.7 pTM=0.398 ipTM=0.254 tol=13.8
2024-12-05 14:11:31,762 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.3 pTM=0.386 ipTM=0.345 tol=10.5
2024-12-05 14:12:46,540 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.1 pTM=0.38 ipTM=0.344 tol=11.3
2024-12-05 14:14:01,194 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.5 pTM=0.387 ipTM=0.33 tol=10.8
2024-12-05 14:15:15,864 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.5 pTM=0.387 ipTM=0.34 tol=7.29
2024-12-05 14:16:30,573 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.4 pTM=0.384 ipTM=0.3 tol=11
2024-12-05 14:17:45,351 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.1 pTM=0.381 ipTM=0.314 tol=9.05
2024-12-05 14:19:00,043 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.4 pTM=0.384 ipTM=0.323 tol=10.6
2024-12-05 14:20:14,804 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.2 pTM=0.384 ipTM=0.329 tol=9.96
2024-12-05 14:21:29,503 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.5 pTM=0.386 ipTM=0.297 tol=5.31
2024-12-05 14:22:44,245 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.2 pTM=0.386 ipTM=0.311 tol=4.51
2024-12-05 14:23:58,952 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.3 pTM=0.383 ipTM=0.305 tol=4.78
2024-12-05 14:25:13,743 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.9 pTM=0.38 ipTM=0.313 tol=9.84
2024-12-05 14:26:28,448 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.3 pTM=0.382 ipTM=0.312 tol=4.69
2024-12-05 14:27:43,095 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.2 pTM=0.384 ipTM=0.325 tol=10.3
2024-12-05 14:28:57,759 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.5 pTM=0.384 ipTM=0.302 tol=4.32
2024-12-05 14:30:12,480 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.1 pTM=0.384 ipTM=0.328 tol=9.48
2024-12-05 14:31:27,209 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.3 pTM=0.383 ipTM=0.295 tol=7.41
2024-12-05 14:32:41,985 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.3 pTM=0.384 ipTM=0.333 tol=6.31
2024-12-05 14:33:56,734 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.4 pTM=0.383 ipTM=0.287 tol=5.54
2024-12-05 14:35:11,527 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.1 pTM=0.382 ipTM=0.308 tol=8.61
2024-12-05 14:36:26,305 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.4 pTM=0.382 ipTM=0.313 tol=5.19
2024-12-05 14:37:41,041 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.1 pTM=0.385 ipTM=0.299 tol=4.25
2024-12-05 14:38:55,773 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.4 pTM=0.384 ipTM=0.269 tol=3.99
2024-12-05 14:40:10,489 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.2 pTM=0.386 ipTM=0.283 tol=7.35
2024-12-05 14:41:25,247 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.3 pTM=0.381 ipTM=0.287 tol=5.29
2024-12-05 14:42:39,978 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.1 pTM=0.382 ipTM=0.299 tol=5.15
2024-12-05 14:43:54,694 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.5 pTM=0.381 ipTM=0.315 tol=4.66
2024-12-05 14:45:09,397 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.2 pTM=0.384 ipTM=0.322 tol=4.21
2024-12-05 14:45:09,398 alphafold2_multimer_v3_model_5_seed_000 took 2316.1s (30 recycles)
2024-12-05 14:45:10,872 reranking models by 'multimer' metric
2024-12-05 14:45:14,889 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 14:49:09,137 Relaxation took 238.3s
2024-12-05 14:49:09,137 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47 pTM=0.398 ipTM=0.414
2024-12-05 14:52:50,126 Relaxation took 221.0s
2024-12-05 14:52:50,126 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.1 pTM=0.395 ipTM=0.4
2024-12-05 14:55:57,655 Relaxation took 187.5s
2024-12-05 14:55:57,655 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.4 pTM=0.403 ipTM=0.393
2024-12-05 15:00:07,520 Relaxation took 249.9s
2024-12-05 15:00:07,521 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=46.4 pTM=0.384 ipTM=0.329
2024-12-05 15:21:42,703 Relaxation took 1295.2s
2024-12-05 15:21:42,703 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.2 pTM=0.384 ipTM=0.322
2024-12-05 15:21:46,010 Done