2024-12-05 11:32:18,925 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 11:32:19,240 Running on GPU
2024-12-05 11:32:23,237 Found 6 citations for tools or databases
2024-12-05 11:32:23,237 Query 1/1: DCAF5_PLCD3 (length 1731)
2024-12-05 11:32:23,557 Sleeping for 8s. Reason: PENDING
2024-12-05 11:32:31,816 Sleeping for 10s. Reason: RUNNING
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2024-12-05 11:33:44,143 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:33:50,400 Sleeping for 6s. Reason: RUNNING
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2024-12-05 11:34:05,921 Sleeping for 7s. Reason: RUNNING
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2024-12-05 11:34:19,468 Sleeping for 8s. Reason: RUNNING
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2024-12-05 11:35:05,000 Sleeping for 6s. Reason: RUNNING
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2024-12-05 11:35:18,516 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:35:24,773 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:35:35,036 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:35:43,302 Sleeping for 7s. Reason: RUNNING
2024-12-05 11:35:50,559 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:36:00,828 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:36:11,086 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:36:16,341 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:36:22,604 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:36:27,857 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:36:38,119 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:36:43,372 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:36:48,624 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:36:56,884 Sleeping for 7s. Reason: RUNNING
2024-12-05 11:37:05,960 Sleeping for 10s. Reason: PENDING
2024-12-05 11:37:16,221 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:37:21,472 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:37:30,729 Sleeping for 7s. Reason: RUNNING
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2024-12-05 11:37:43,278 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:37:52,534 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:38:01,788 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:38:11,048 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:38:21,307 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:38:29,567 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:38:38,828 Sleeping for 6s. Reason: RUNNING
2024-12-05 11:38:45,083 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:38:50,342 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:38:59,598 Sleeping for 5s. Reason: RUNNING
2024-12-05 11:39:04,852 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:39:13,109 Sleeping for 8s. Reason: RUNNING
2024-12-05 11:39:21,369 Sleeping for 10s. Reason: RUNNING
2024-12-05 11:39:31,627 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:39:40,903 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:39:50,173 Sleeping for 9s. Reason: RUNNING
2024-12-05 11:40:04,508 Setting max_seq=508, max_extra_seq=2048
2024-12-05 11:44:32,033 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62 pTM=0.503 ipTM=0.205
2024-12-05 11:46:13,860 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.4 pTM=0.493 ipTM=0.204 tol=14.1
2024-12-05 11:47:55,736 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.2 pTM=0.489 ipTM=0.207 tol=7.82
2024-12-05 11:49:37,603 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.1 pTM=0.485 ipTM=0.21 tol=6.07
2024-12-05 11:51:19,465 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.2 pTM=0.483 ipTM=0.256 tol=7.89
2024-12-05 11:53:01,293 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.9 pTM=0.476 ipTM=0.314 tol=6.37
2024-12-05 11:54:43,113 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.1 pTM=0.475 ipTM=0.319 tol=3.05
2024-12-05 11:56:24,935 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60.9 pTM=0.47 ipTM=0.316 tol=4.15
2024-12-05 11:58:06,761 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.8 pTM=0.469 ipTM=0.318 tol=5.5
2024-12-05 11:59:48,657 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.8 pTM=0.467 ipTM=0.318 tol=6.12
2024-12-05 12:01:30,613 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.9 pTM=0.47 ipTM=0.31 tol=5.09
2024-12-05 12:03:12,551 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.8 pTM=0.467 ipTM=0.301 tol=4.9
2024-12-05 12:04:54,413 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.8 pTM=0.468 ipTM=0.303 tol=3.93
2024-12-05 12:06:36,323 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.5 pTM=0.466 ipTM=0.283 tol=3.29
2024-12-05 12:08:18,207 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.8 pTM=0.472 ipTM=0.28 tol=3.57
2024-12-05 12:10:00,064 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.7 pTM=0.465 ipTM=0.287 tol=4.67
2024-12-05 12:11:41,918 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61 pTM=0.471 ipTM=0.292 tol=3.53
2024-12-05 12:13:23,798 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.8 pTM=0.467 ipTM=0.291 tol=3.27
2024-12-05 12:15:05,637 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.9 pTM=0.471 ipTM=0.291 tol=3.91
2024-12-05 12:16:47,558 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.7 pTM=0.465 ipTM=0.281 tol=4.87
2024-12-05 12:18:29,429 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.1 pTM=0.472 ipTM=0.296 tol=4.43
2024-12-05 12:20:11,273 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.9 pTM=0.469 ipTM=0.295 tol=2.88
2024-12-05 12:21:53,082 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61 pTM=0.472 ipTM=0.3 tol=2.31
2024-12-05 12:23:35,000 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.8 pTM=0.468 ipTM=0.295 tol=2.82
2024-12-05 12:25:16,829 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61 pTM=0.471 ipTM=0.301 tol=2.24
2024-12-05 12:26:58,723 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.9 pTM=0.469 ipTM=0.286 tol=2.68
2024-12-05 12:28:40,491 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.9 pTM=0.472 ipTM=0.298 tol=6
2024-12-05 12:30:22,337 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.1 pTM=0.469 ipTM=0.304 tol=5.36
2024-12-05 12:32:04,051 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61 pTM=0.472 ipTM=0.296 tol=3.46
2024-12-05 12:33:45,864 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.9 pTM=0.467 ipTM=0.298 tol=5.66
2024-12-05 12:35:27,702 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61 pTM=0.472 ipTM=0.305 tol=5.83
2024-12-05 12:35:27,704 alphafold2_multimer_v3_model_1_seed_000 took 3317.8s (30 recycles)
2024-12-05 12:37:11,415 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.1 pTM=0.521 ipTM=0.242
2024-12-05 12:38:53,394 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62 pTM=0.497 ipTM=0.344 tol=10.7
2024-12-05 12:40:35,389 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.9 pTM=0.49 ipTM=0.355 tol=7.28
2024-12-05 12:42:17,433 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62 pTM=0.487 ipTM=0.361 tol=4.87
2024-12-05 12:43:59,432 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.2 pTM=0.491 ipTM=0.345 tol=3.67
2024-12-05 12:45:41,416 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.1 pTM=0.485 ipTM=0.346 tol=2.96
2024-12-05 12:47:23,445 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.2 pTM=0.486 ipTM=0.35 tol=2.48
2024-12-05 12:49:05,425 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.2 pTM=0.485 ipTM=0.35 tol=2.35
2024-12-05 12:50:47,381 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.2 pTM=0.486 ipTM=0.348 tol=2.28
2024-12-05 12:52:29,395 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.1 pTM=0.483 ipTM=0.351 tol=1.94
2024-12-05 12:54:11,393 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.2 pTM=0.484 ipTM=0.349 tol=2.27
2024-12-05 12:55:53,448 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.2 pTM=0.484 ipTM=0.348 tol=2.94
2024-12-05 12:57:35,441 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.3 pTM=0.486 ipTM=0.354 tol=2.54
2024-12-05 12:59:17,360 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.1 pTM=0.483 ipTM=0.349 tol=2.57
2024-12-05 13:00:59,366 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.3 pTM=0.487 ipTM=0.351 tol=2.24
2024-12-05 13:02:41,340 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.3 pTM=0.485 ipTM=0.354 tol=2.06
2024-12-05 13:04:23,314 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.2 pTM=0.486 ipTM=0.349 tol=2.04
2024-12-05 13:06:05,328 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.3 pTM=0.485 ipTM=0.355 tol=3.38
2024-12-05 13:07:47,355 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.2 pTM=0.486 ipTM=0.353 tol=1.93
2024-12-05 13:09:29,311 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.2 pTM=0.486 ipTM=0.355 tol=2.58
2024-12-05 13:11:11,310 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.5 pTM=0.488 ipTM=0.353 tol=3.56
2024-12-05 13:12:53,263 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.3 pTM=0.488 ipTM=0.353 tol=1.62
2024-12-05 13:14:35,199 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.4 pTM=0.489 ipTM=0.351 tol=2.33
2024-12-05 13:16:17,220 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.4 pTM=0.487 ipTM=0.358 tol=2.38
2024-12-05 13:17:59,227 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.4 pTM=0.489 ipTM=0.352 tol=2.29
2024-12-05 13:19:41,242 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.3 pTM=0.487 ipTM=0.349 tol=2.37
2024-12-05 13:21:23,188 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.4 pTM=0.488 ipTM=0.358 tol=1.49
2024-12-05 13:23:05,151 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.5 pTM=0.489 ipTM=0.357 tol=2.29
2024-12-05 13:24:47,129 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.3 pTM=0.486 ipTM=0.35 tol=2.78
2024-12-05 13:26:29,087 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.2 pTM=0.486 ipTM=0.353 tol=1.51
2024-12-05 13:28:11,032 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.4 pTM=0.486 ipTM=0.354 tol=1.8
2024-12-05 13:28:11,034 alphafold2_multimer_v3_model_2_seed_000 took 3161.6s (30 recycles)
2024-12-05 13:29:54,858 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.1 pTM=0.505 ipTM=0.197
2024-12-05 13:31:36,809 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.7 pTM=0.504 ipTM=0.232 tol=12.5
2024-12-05 13:33:18,763 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.4 pTM=0.518 ipTM=0.32 tol=6.34
2024-12-05 13:35:00,774 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.2 pTM=0.506 ipTM=0.335 tol=8.19
2024-12-05 13:36:42,760 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.7 pTM=0.518 ipTM=0.333 tol=3.24
2024-12-05 13:38:24,819 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.5 pTM=0.507 ipTM=0.336 tol=3.1
2024-12-05 13:40:06,801 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.5 pTM=0.515 ipTM=0.327 tol=2.95
2024-12-05 13:41:48,922 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.4 pTM=0.506 ipTM=0.325 tol=2.94
2024-12-05 13:43:30,955 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.6 pTM=0.513 ipTM=0.332 tol=3.14
2024-12-05 13:45:12,990 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.5 pTM=0.508 ipTM=0.328 tol=2.46
2024-12-05 13:46:55,000 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.7 pTM=0.516 ipTM=0.326 tol=2.37
2024-12-05 13:48:37,085 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.6 pTM=0.508 ipTM=0.329 tol=1.6
2024-12-05 13:50:19,115 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.6 pTM=0.511 ipTM=0.327 tol=1.48
2024-12-05 13:52:01,151 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.5 pTM=0.509 ipTM=0.319 tol=1.53
2024-12-05 13:53:43,239 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.6 pTM=0.509 ipTM=0.333 tol=4.64
2024-12-05 13:55:25,289 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.5 pTM=0.51 ipTM=0.334 tol=1.98
2024-12-05 13:57:07,317 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.4 pTM=0.509 ipTM=0.33 tol=1.79
2024-12-05 13:58:49,293 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.6 pTM=0.509 ipTM=0.331 tol=1.83
2024-12-05 14:00:31,275 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.5 pTM=0.51 ipTM=0.335 tol=1.49
2024-12-05 14:02:13,273 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.5 pTM=0.51 ipTM=0.331 tol=1.33
2024-12-05 14:03:55,378 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.6 pTM=0.514 ipTM=0.337 tol=1.49
2024-12-05 14:05:37,458 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.6 pTM=0.511 ipTM=0.338 tol=1.56
2024-12-05 14:07:19,428 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.4 pTM=0.511 ipTM=0.34 tol=1.61
2024-12-05 14:09:01,515 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.6 pTM=0.511 ipTM=0.342 tol=1.31
2024-12-05 14:10:43,594 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.6 pTM=0.511 ipTM=0.34 tol=1.39
2024-12-05 14:12:25,660 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.7 pTM=0.514 ipTM=0.338 tol=1.58
2024-12-05 14:14:07,728 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.6 pTM=0.512 ipTM=0.339 tol=1.92
2024-12-05 14:15:49,826 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.5 pTM=0.511 ipTM=0.337 tol=1.99
2024-12-05 14:17:31,902 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.5 pTM=0.511 ipTM=0.332 tol=1.86
2024-12-05 14:19:13,982 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.4 pTM=0.509 ipTM=0.338 tol=1.94
2024-12-05 14:20:56,089 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.6 pTM=0.512 ipTM=0.335 tol=1.41
2024-12-05 14:20:56,090 alphafold2_multimer_v3_model_3_seed_000 took 3163.3s (30 recycles)
2024-12-05 14:22:40,025 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.4 pTM=0.505 ipTM=0.232
2024-12-05 14:24:22,085 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.9 pTM=0.493 ipTM=0.307 tol=13.6
2024-12-05 14:26:04,158 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.6 pTM=0.489 ipTM=0.378 tol=10.1
2024-12-05 14:27:46,219 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.4 pTM=0.482 ipTM=0.376 tol=7.14
2024-12-05 14:29:28,305 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.5 pTM=0.485 ipTM=0.367 tol=4.25
2024-12-05 14:31:10,415 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.4 pTM=0.478 ipTM=0.371 tol=3.29
2024-12-05 14:32:52,573 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.3 pTM=0.481 ipTM=0.368 tol=6.21
2024-12-05 14:34:34,793 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.5 pTM=0.475 ipTM=0.37 tol=4.66
2024-12-05 14:36:17,109 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.4 pTM=0.478 ipTM=0.369 tol=4.93
2024-12-05 14:37:59,327 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.2 pTM=0.472 ipTM=0.363 tol=4.28
2024-12-05 14:39:41,613 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.4 pTM=0.483 ipTM=0.365 tol=5.49
2024-12-05 14:41:23,783 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.1 pTM=0.475 ipTM=0.368 tol=7.47
2024-12-05 14:43:05,911 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.6 pTM=0.483 ipTM=0.365 tol=5.59
2024-12-05 14:44:48,054 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60 pTM=0.472 ipTM=0.364 tol=5.74
2024-12-05 14:46:30,183 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.4 pTM=0.486 ipTM=0.364 tol=7.04
2024-12-05 14:48:12,253 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.3 pTM=0.476 ipTM=0.363 tol=8.8
2024-12-05 14:49:54,347 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.5 pTM=0.483 ipTM=0.362 tol=8.27
2024-12-05 14:51:36,396 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.3 pTM=0.475 ipTM=0.362 tol=6.68
2024-12-05 14:53:18,497 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.2 pTM=0.481 ipTM=0.367 tol=7.48
2024-12-05 14:55:00,588 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.2 pTM=0.475 ipTM=0.363 tol=5.95
2024-12-05 14:56:42,859 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.3 pTM=0.479 ipTM=0.371 tol=5.93
2024-12-05 14:58:25,100 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60 pTM=0.473 ipTM=0.374 tol=7.89
2024-12-05 15:00:07,329 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.2 pTM=0.484 ipTM=0.369 tol=7.14
2024-12-05 15:01:49,512 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.3 pTM=0.476 ipTM=0.371 tol=5.63
2024-12-05 15:03:31,767 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.5 pTM=0.483 ipTM=0.368 tol=6.49
2024-12-05 15:05:13,981 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.2 pTM=0.473 ipTM=0.368 tol=6.24
2024-12-05 15:06:56,252 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.5 pTM=0.486 ipTM=0.373 tol=5.11
2024-12-05 15:08:38,428 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.2 pTM=0.475 ipTM=0.366 tol=3.96
2024-12-05 15:10:20,658 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.3 pTM=0.483 ipTM=0.36 tol=5.83
2024-12-05 15:12:02,836 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.1 pTM=0.474 ipTM=0.364 tol=4.17
2024-12-05 15:13:45,037 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.5 pTM=0.485 ipTM=0.372 tol=7
2024-12-05 15:13:45,039 alphafold2_multimer_v3_model_4_seed_000 took 3167.0s (30 recycles)
2024-12-05 15:15:28,965 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.8 pTM=0.503 ipTM=0.231
2024-12-05 15:17:11,004 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.5 pTM=0.49 ipTM=0.238 tol=17
2024-12-05 15:18:53,137 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62 pTM=0.5 ipTM=0.272 tol=5.01
2024-12-05 15:20:35,245 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.9 pTM=0.502 ipTM=0.251 tol=4.89
2024-12-05 15:22:17,367 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.9 pTM=0.502 ipTM=0.208 tol=8.95
2024-12-05 15:23:59,447 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.7 pTM=0.499 ipTM=0.203 tol=9.2
2024-12-05 15:25:41,656 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.2 pTM=0.502 ipTM=0.201 tol=5.91
2024-12-05 15:27:23,805 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.7 pTM=0.498 ipTM=0.208 tol=8.32
2024-12-05 15:29:05,841 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.1 pTM=0.504 ipTM=0.299 tol=6.16
2024-12-05 15:30:47,944 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62 pTM=0.502 ipTM=0.213 tol=5.68
2024-12-05 15:32:30,028 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62 pTM=0.504 ipTM=0.235 tol=4.94
2024-12-05 15:34:12,178 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.9 pTM=0.502 ipTM=0.236 tol=5.01
2024-12-05 15:35:54,340 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.3 pTM=0.507 ipTM=0.261 tol=2.37
2024-12-05 15:37:36,414 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.9 pTM=0.505 ipTM=0.284 tol=4.09
2024-12-05 15:39:18,603 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.3 pTM=0.506 ipTM=0.24 tol=5.23
2024-12-05 15:41:00,726 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.2 pTM=0.506 ipTM=0.239 tol=2.54
2024-12-05 15:42:42,863 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.2 pTM=0.505 ipTM=0.281 tol=5.55
2024-12-05 15:44:24,949 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62 pTM=0.503 ipTM=0.221 tol=4.22
2024-12-05 15:46:07,030 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.9 pTM=0.498 ipTM=0.212 tol=4.99
2024-12-05 15:47:49,055 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.9 pTM=0.501 ipTM=0.211 tol=4.79
2024-12-05 15:49:31,167 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.2 pTM=0.502 ipTM=0.214 tol=5.43
2024-12-05 15:51:13,258 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.1 pTM=0.505 ipTM=0.244 tol=4.09
2024-12-05 15:52:55,339 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62 pTM=0.504 ipTM=0.263 tol=3.53
2024-12-05 15:54:37,459 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.2 pTM=0.505 ipTM=0.244 tol=2.66
2024-12-05 15:56:19,599 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.2 pTM=0.504 ipTM=0.248 tol=4.71
2024-12-05 15:58:01,765 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.4 pTM=0.51 ipTM=0.274 tol=2.89
2024-12-05 15:59:43,929 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.5 pTM=0.508 ipTM=0.26 tol=2.38
2024-12-05 16:01:26,018 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.2 pTM=0.507 ipTM=0.253 tol=6.34
2024-12-05 16:03:08,136 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.3 pTM=0.507 ipTM=0.248 tol=4.79
2024-12-05 16:04:50,203 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.1 pTM=0.505 ipTM=0.253 tol=3.61
2024-12-05 16:06:32,295 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.4 pTM=0.507 ipTM=0.271 tol=2.79
2024-12-05 16:06:32,297 alphafold2_multimer_v3_model_5_seed_000 took 3165.5s (30 recycles)
2024-12-05 16:06:34,041 reranking models by 'multimer' metric
2024-12-05 16:06:35,624 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 16:11:57,192 Relaxation took 323.2s
2024-12-05 16:11:57,192 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.5 pTM=0.485 ipTM=0.372
2024-12-05 16:16:06,881 Relaxation took 249.7s
2024-12-05 16:16:06,881 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.4 pTM=0.486 ipTM=0.354
2024-12-05 16:19:59,806 Relaxation took 232.9s
2024-12-05 16:19:59,806 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.6 pTM=0.512 ipTM=0.335
2024-12-05 16:23:18,168 Relaxation took 198.4s
2024-12-05 16:23:18,168 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61 pTM=0.472 ipTM=0.305
2024-12-05 16:26:10,728 Relaxation took 172.6s
2024-12-05 16:26:10,728 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.4 pTM=0.507 ipTM=0.271
2024-12-05 16:26:15,048 Done