2024-12-05 13:25:40,957 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 13:25:41,341 Running on GPU
2024-12-05 13:25:46,122 Found 6 citations for tools or databases
2024-12-05 13:25:46,122 Query 1/1: DCUN1D2_CARM1 (length 867)
2024-12-05 13:25:46,395 Sleeping for 5s. Reason: PENDING
2024-12-05 13:25:51,650 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:25:56,904 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:26:02,160 Sleeping for 10s. Reason: RUNNING
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2024-12-05 13:26:18,688 Sleeping for 7s. Reason: RUNNING
2024-12-05 13:26:25,946 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:26:31,206 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:26:37,463 Sleeping for 7s. Reason: RUNNING
2024-12-05 13:26:44,722 Sleeping for 8s. Reason: RUNNING
2024-12-05 13:26:52,979 Sleeping for 8s. Reason: RUNNING
2024-12-05 13:27:01,235 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:27:07,501 Sleeping for 8s. Reason: RUNNING
2024-12-05 13:27:15,760 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:27:21,016 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:27:27,278 Sleeping for 10s. Reason: RUNNING
2024-12-05 13:27:37,538 Sleeping for 8s. Reason: RUNNING
2024-12-05 13:27:45,801 Sleeping for 8s. Reason: RUNNING
2024-12-05 13:27:54,062 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:27:59,318 Sleeping for 10s. Reason: RUNNING
2024-12-05 13:28:11,302 Sleeping for 6s. Reason: PENDING
2024-12-05 13:28:17,558 Sleeping for 10s. Reason: RUNNING
2024-12-05 13:28:27,817 Sleeping for 7s. Reason: RUNNING
2024-12-05 13:28:35,075 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:28:41,329 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:28:46,585 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:28:51,847 Sleeping for 7s. Reason: RUNNING
2024-12-05 13:28:59,108 Sleeping for 8s. Reason: RUNNING
2024-12-05 13:29:07,373 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:29:13,628 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:29:19,896 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:29:26,147 Sleeping for 8s. Reason: RUNNING
2024-12-05 13:29:34,408 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:29:40,662 Sleeping for 8s. Reason: RUNNING
2024-12-05 13:29:48,918 Sleeping for 9s. Reason: RUNNING
2024-12-05 13:30:02,071 Setting max_seq=508, max_extra_seq=2048
2024-12-05 13:33:37,331 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71 pTM=0.456 ipTM=0.202
2024-12-05 13:33:57,350 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.9 pTM=0.45 ipTM=0.206 tol=9.05
2024-12-05 13:34:17,419 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.6 pTM=0.452 ipTM=0.145 tol=6.64
2024-12-05 13:34:37,530 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.1 pTM=0.457 ipTM=0.143 tol=3.83
2024-12-05 13:34:57,695 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.6 pTM=0.458 ipTM=0.14 tol=4.04
2024-12-05 13:35:17,891 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.1 pTM=0.459 ipTM=0.138 tol=3.13
2024-12-05 13:35:38,103 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72 pTM=0.462 ipTM=0.152 tol=4.26
2024-12-05 13:35:58,331 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72 pTM=0.459 ipTM=0.138 tol=3.6
2024-12-05 13:36:18,569 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.1 pTM=0.462 ipTM=0.148 tol=3.04
2024-12-05 13:36:38,808 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.9 pTM=0.46 ipTM=0.141 tol=2.6
2024-12-05 13:36:59,041 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.1 pTM=0.461 ipTM=0.15 tol=4.54
2024-12-05 13:37:19,304 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71.8 pTM=0.465 ipTM=0.14 tol=8.66
2024-12-05 13:37:39,564 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.8 pTM=0.476 ipTM=0.154 tol=7.73
2024-12-05 13:37:59,832 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.3 pTM=0.47 ipTM=0.141 tol=5.42
2024-12-05 13:38:20,106 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.8 pTM=0.476 ipTM=0.158 tol=3.47
2024-12-05 13:38:40,370 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.6 pTM=0.473 ipTM=0.146 tol=3.12
2024-12-05 13:39:00,641 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.9 pTM=0.477 ipTM=0.159 tol=3.08
2024-12-05 13:39:20,943 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.7 pTM=0.474 ipTM=0.148 tol=3.11
2024-12-05 13:39:41,249 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.8 pTM=0.477 ipTM=0.155 tol=3.18
2024-12-05 13:40:01,561 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.9 pTM=0.475 ipTM=0.145 tol=3.65
2024-12-05 13:40:21,867 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.1 pTM=0.479 ipTM=0.153 tol=9.84
2024-12-05 13:40:42,188 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.1 pTM=0.476 ipTM=0.148 tol=3.88
2024-12-05 13:41:02,481 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.1 pTM=0.478 ipTM=0.151 tol=2.24
2024-12-05 13:41:22,779 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.2 pTM=0.475 ipTM=0.142 tol=1.9
2024-12-05 13:41:43,078 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.3 pTM=0.478 ipTM=0.151 tol=1.4
2024-12-05 13:42:03,387 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73 pTM=0.476 ipTM=0.147 tol=1.73
2024-12-05 13:42:23,683 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73 pTM=0.476 ipTM=0.152 tol=1.49
2024-12-05 13:42:43,956 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.9 pTM=0.475 ipTM=0.148 tol=1.71
2024-12-05 13:43:04,239 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.2 pTM=0.479 ipTM=0.155 tol=1.18
2024-12-05 13:43:24,530 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.1 pTM=0.476 ipTM=0.145 tol=1.76
2024-12-05 13:43:44,829 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.2 pTM=0.478 ipTM=0.152 tol=1.53
2024-12-05 13:43:44,830 alphafold2_multimer_v3_model_1_seed_000 took 817.3s (30 recycles)
2024-12-05 13:44:05,707 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.9 pTM=0.46 ipTM=0.143
2024-12-05 13:44:25,988 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.9 pTM=0.46 ipTM=0.131 tol=7.17
2024-12-05 13:44:46,270 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.2 pTM=0.461 ipTM=0.135 tol=6.9
2024-12-05 13:45:06,573 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.5 pTM=0.462 ipTM=0.132 tol=4.69
2024-12-05 13:45:26,889 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=75 pTM=0.464 ipTM=0.138 tol=2.58
2024-12-05 13:45:47,186 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.9 pTM=0.464 ipTM=0.14 tol=2.47
2024-12-05 13:46:07,496 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=75 pTM=0.465 ipTM=0.142 tol=2.55
2024-12-05 13:46:27,799 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75.1 pTM=0.466 ipTM=0.142 tol=2.24
2024-12-05 13:46:48,105 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.9 pTM=0.465 ipTM=0.142 tol=1.74
2024-12-05 13:47:08,458 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=75.1 pTM=0.466 ipTM=0.142 tol=2.46
2024-12-05 13:47:28,833 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.1 pTM=0.466 ipTM=0.142 tol=2.09
2024-12-05 13:47:49,204 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75 pTM=0.465 ipTM=0.143 tol=1.35
2024-12-05 13:48:09,582 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.9 pTM=0.465 ipTM=0.142 tol=1.13
2024-12-05 13:48:29,935 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.9 pTM=0.464 ipTM=0.141 tol=1.42
2024-12-05 13:48:50,277 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.9 pTM=0.465 ipTM=0.142 tol=1.59
2024-12-05 13:49:10,612 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.9 pTM=0.465 ipTM=0.145 tol=1.97
2024-12-05 13:49:30,934 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.9 pTM=0.465 ipTM=0.144 tol=1.79
2024-12-05 13:49:51,253 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.8 pTM=0.464 ipTM=0.142 tol=1.75
2024-12-05 13:50:11,584 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.9 pTM=0.464 ipTM=0.14 tol=1.93
2024-12-05 13:50:31,899 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.9 pTM=0.464 ipTM=0.142 tol=1.43
2024-12-05 13:50:52,212 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.8 pTM=0.465 ipTM=0.142 tol=1.49
2024-12-05 13:51:12,516 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.9 pTM=0.465 ipTM=0.143 tol=1.38
2024-12-05 13:51:32,823 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.7 pTM=0.464 ipTM=0.142 tol=1.59
2024-12-05 13:51:53,134 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.9 pTM=0.464 ipTM=0.139 tol=1.63
2024-12-05 13:52:13,450 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75 pTM=0.465 ipTM=0.138 tol=1.49
2024-12-05 13:52:33,761 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.9 pTM=0.464 ipTM=0.141 tol=1.5
2024-12-05 13:52:54,070 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.9 pTM=0.464 ipTM=0.139 tol=2.06
2024-12-05 13:53:14,365 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.9 pTM=0.464 ipTM=0.14 tol=2
2024-12-05 13:53:34,650 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.7 pTM=0.464 ipTM=0.141 tol=1.32
2024-12-05 13:53:54,945 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.8 pTM=0.465 ipTM=0.14 tol=3.18
2024-12-05 13:54:15,252 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.8 pTM=0.465 ipTM=0.142 tol=2.4
2024-12-05 13:54:15,253 alphafold2_multimer_v3_model_2_seed_000 took 629.8s (30 recycles)
2024-12-05 13:54:36,198 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.2 pTM=0.468 ipTM=0.146
2024-12-05 13:54:56,618 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.1 pTM=0.487 ipTM=0.175 tol=10.9
2024-12-05 13:55:17,035 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.4 pTM=0.486 ipTM=0.18 tol=7.03
2024-12-05 13:55:37,463 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.7 pTM=0.487 ipTM=0.181 tol=5.78
2024-12-05 13:55:57,891 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.9 pTM=0.49 ipTM=0.19 tol=4.8
2024-12-05 13:56:18,318 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.9 pTM=0.491 ipTM=0.193 tol=3.79
2024-12-05 13:56:38,722 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.9 pTM=0.492 ipTM=0.195 tol=1.75
2024-12-05 13:56:59,142 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.1 pTM=0.493 ipTM=0.196 tol=1.73
2024-12-05 13:57:19,556 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74.1 pTM=0.495 ipTM=0.197 tol=1.27
2024-12-05 13:57:39,971 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=74.1 pTM=0.495 ipTM=0.199 tol=2.38
2024-12-05 13:58:00,390 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.2 pTM=0.496 ipTM=0.201 tol=1.46
2024-12-05 13:58:20,788 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=74.1 pTM=0.494 ipTM=0.197 tol=1.01
2024-12-05 13:58:41,184 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.1 pTM=0.496 ipTM=0.203 tol=3.46
2024-12-05 13:59:01,567 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=74.1 pTM=0.496 ipTM=0.2 tol=3.08
2024-12-05 13:59:21,985 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.9 pTM=0.495 ipTM=0.205 tol=3.39
2024-12-05 13:59:42,414 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.2 pTM=0.493 ipTM=0.196 tol=3.11
2024-12-05 14:00:02,829 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.2 pTM=0.496 ipTM=0.2 tol=1.86
2024-12-05 14:00:23,243 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.2 pTM=0.495 ipTM=0.199 tol=3.4
2024-12-05 14:00:43,662 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.9 pTM=0.494 ipTM=0.204 tol=3.25
2024-12-05 14:01:04,060 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.2 pTM=0.495 ipTM=0.198 tol=2.81
2024-12-05 14:01:24,466 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74 pTM=0.494 ipTM=0.201 tol=2.74
2024-12-05 14:01:44,909 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.9 pTM=0.488 ipTM=0.199 tol=5.51
2024-12-05 14:02:05,339 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.7 pTM=0.488 ipTM=0.2 tol=4.05
2024-12-05 14:02:25,809 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.8 pTM=0.488 ipTM=0.199 tol=5.59
2024-12-05 14:02:46,301 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.8 pTM=0.488 ipTM=0.197 tol=2.88
2024-12-05 14:03:06,790 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.8 pTM=0.489 ipTM=0.203 tol=2.59
2024-12-05 14:03:27,256 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.8 pTM=0.487 ipTM=0.197 tol=1.65
2024-12-05 14:03:47,725 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.9 pTM=0.491 ipTM=0.209 tol=1.91
2024-12-05 14:04:08,196 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.7 pTM=0.49 ipTM=0.204 tol=3.2
2024-12-05 14:04:28,662 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74 pTM=0.491 ipTM=0.207 tol=1.87
2024-12-05 14:04:49,137 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74 pTM=0.49 ipTM=0.203 tol=1.78
2024-12-05 14:04:49,138 alphafold2_multimer_v3_model_3_seed_000 took 633.3s (30 recycles)
2024-12-05 14:05:10,089 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.1 pTM=0.459 ipTM=0.138
2024-12-05 14:05:30,471 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.2 pTM=0.462 ipTM=0.147 tol=13
2024-12-05 14:05:50,838 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.9 pTM=0.457 ipTM=0.133 tol=7.3
2024-12-05 14:06:11,219 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.3 pTM=0.459 ipTM=0.137 tol=7.09
2024-12-05 14:06:31,624 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.2 pTM=0.459 ipTM=0.133 tol=4.14
2024-12-05 14:06:52,020 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.3 pTM=0.461 ipTM=0.136 tol=9.48
2024-12-05 14:07:12,455 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.2 pTM=0.461 ipTM=0.132 tol=7.41
2024-12-05 14:07:32,872 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=73.2 pTM=0.463 ipTM=0.134 tol=3.66
2024-12-05 14:07:53,278 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.2 pTM=0.462 ipTM=0.134 tol=2.12
2024-12-05 14:08:13,708 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=73.4 pTM=0.465 ipTM=0.136 tol=2.15
2024-12-05 14:08:34,133 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.3 pTM=0.464 ipTM=0.134 tol=2.84
2024-12-05 14:08:54,534 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.5 pTM=0.469 ipTM=0.137 tol=3.83
2024-12-05 14:09:14,930 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=73.4 pTM=0.474 ipTM=0.137 tol=3.58
2024-12-05 14:09:35,334 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=73.5 pTM=0.479 ipTM=0.136 tol=2.45
2024-12-05 14:09:55,769 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=73.7 pTM=0.483 ipTM=0.14 tol=4.32
2024-12-05 14:10:16,180 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=73.7 pTM=0.483 ipTM=0.136 tol=3.29
2024-12-05 14:10:36,587 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=73.8 pTM=0.486 ipTM=0.136 tol=2.19
2024-12-05 14:10:56,989 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.6 pTM=0.484 ipTM=0.139 tol=2.47
2024-12-05 14:11:17,394 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=73.7 pTM=0.486 ipTM=0.136 tol=3.12
2024-12-05 14:11:37,786 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=73.9 pTM=0.489 ipTM=0.138 tol=2.92
2024-12-05 14:11:58,173 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=73.7 pTM=0.482 ipTM=0.134 tol=3.06
2024-12-05 14:12:18,571 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73.9 pTM=0.486 ipTM=0.136 tol=3.37
2024-12-05 14:12:38,973 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=74 pTM=0.489 ipTM=0.136 tol=2.63
2024-12-05 14:12:59,355 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74 pTM=0.488 ipTM=0.138 tol=1.52
2024-12-05 14:13:19,742 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=74 pTM=0.489 ipTM=0.135 tol=1.45
2024-12-05 14:13:40,127 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=73.9 pTM=0.489 ipTM=0.137 tol=2.41
2024-12-05 14:14:00,520 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=73.9 pTM=0.49 ipTM=0.137 tol=1.28
2024-12-05 14:14:20,898 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=73.9 pTM=0.49 ipTM=0.135 tol=2.38
2024-12-05 14:14:41,278 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=73.9 pTM=0.491 ipTM=0.137 tol=2.77
2024-12-05 14:15:01,662 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=73.9 pTM=0.489 ipTM=0.138 tol=4.43
2024-12-05 14:15:22,029 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=73.6 pTM=0.495 ipTM=0.142 tol=4.66
2024-12-05 14:15:22,030 alphafold2_multimer_v3_model_4_seed_000 took 632.3s (30 recycles)
2024-12-05 14:15:42,982 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.2 pTM=0.457 ipTM=0.143
2024-12-05 14:16:03,378 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.4 pTM=0.475 ipTM=0.141 tol=13.8
2024-12-05 14:16:23,782 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=74.1 pTM=0.477 ipTM=0.146 tol=10.7
2024-12-05 14:16:44,211 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=74.2 pTM=0.477 ipTM=0.149 tol=5.99
2024-12-05 14:17:04,636 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=74.8 pTM=0.478 ipTM=0.148 tol=4.79
2024-12-05 14:17:25,107 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=74.7 pTM=0.479 ipTM=0.152 tol=3.77
2024-12-05 14:17:45,588 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=74.6 pTM=0.478 ipTM=0.151 tol=4.8
2024-12-05 14:18:06,101 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=74.9 pTM=0.478 ipTM=0.146 tol=4.78
2024-12-05 14:18:26,591 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.8 pTM=0.478 ipTM=0.147 tol=3.8
2024-12-05 14:18:47,110 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.8 pTM=0.477 ipTM=0.143 tol=3.35
2024-12-05 14:19:07,601 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.7 pTM=0.477 ipTM=0.14 tol=4.58
2024-12-05 14:19:28,087 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.6 pTM=0.476 ipTM=0.137 tol=4.34
2024-12-05 14:19:48,551 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.5 pTM=0.476 ipTM=0.14 tol=4.91
2024-12-05 14:20:09,022 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.4 pTM=0.476 ipTM=0.14 tol=3.37
2024-12-05 14:20:29,478 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.2 pTM=0.476 ipTM=0.139 tol=3.37
2024-12-05 14:20:49,939 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.2 pTM=0.475 ipTM=0.139 tol=4.93
2024-12-05 14:21:10,399 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74.4 pTM=0.475 ipTM=0.137 tol=4.68
2024-12-05 14:21:30,843 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.4 pTM=0.476 ipTM=0.138 tol=5.25
2024-12-05 14:21:51,296 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.7 pTM=0.477 ipTM=0.138 tol=2.4
2024-12-05 14:22:11,734 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.6 pTM=0.476 ipTM=0.139 tol=2.1
2024-12-05 14:22:32,171 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.8 pTM=0.477 ipTM=0.14 tol=3.61
2024-12-05 14:22:52,626 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.9 pTM=0.478 ipTM=0.142 tol=5.3
2024-12-05 14:23:13,044 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.9 pTM=0.478 ipTM=0.141 tol=5.35
2024-12-05 14:23:33,480 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=75 pTM=0.476 ipTM=0.136 tol=1.63
2024-12-05 14:23:53,927 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=75 pTM=0.478 ipTM=0.139 tol=1.98
2024-12-05 14:24:14,383 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.3 pTM=0.468 ipTM=0.137 tol=4.77
2024-12-05 14:24:34,825 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.4 pTM=0.468 ipTM=0.136 tol=6.06
2024-12-05 14:24:55,263 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.6 pTM=0.469 ipTM=0.135 tol=3.35
2024-12-05 14:25:15,744 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.6 pTM=0.469 ipTM=0.136 tol=3.64
2024-12-05 14:25:36,200 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74.6 pTM=0.468 ipTM=0.135 tol=1.51
2024-12-05 14:25:56,718 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.6 pTM=0.468 ipTM=0.134 tol=2.96
2024-12-05 14:25:56,719 alphafold2_multimer_v3_model_5_seed_000 took 634.1s (30 recycles)
2024-12-05 14:25:57,329 reranking models by 'multimer' metric
2024-12-05 14:25:58,412 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 14:27:11,136 Relaxation took 73.8s
2024-12-05 14:27:11,136 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74 pTM=0.49 ipTM=0.203
2024-12-05 14:28:00,387 Relaxation took 49.2s
2024-12-05 14:28:00,387 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.2 pTM=0.478 ipTM=0.152
2024-12-05 14:29:57,346 Relaxation took 117.0s
2024-12-05 14:29:57,346 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=73.6 pTM=0.495 ipTM=0.142
2024-12-05 14:31:00,273 Relaxation took 62.9s
2024-12-05 14:31:00,273 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.8 pTM=0.465 ipTM=0.142
2024-12-05 14:32:16,986 Relaxation took 76.7s
2024-12-05 14:32:16,986 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.6 pTM=0.468 ipTM=0.134
2024-12-05 14:32:18,850 Done