2024-12-05 13:38:08,095 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 13:38:08,476 Running on GPU
2024-12-05 13:38:12,764 Found 6 citations for tools or databases
2024-12-05 13:38:12,764 Query 1/1: DCUN1D2_KCTD3 (length 1074)
2024-12-05 13:38:13,053 Sleeping for 9s. Reason: PENDING
2024-12-05 13:38:22,311 Sleeping for 7s. Reason: PENDING
2024-12-05 13:38:29,573 Sleeping for 5s. Reason: PENDING
2024-12-05 13:38:34,828 Sleeping for 7s. Reason: PENDING
2024-12-05 13:38:42,091 Sleeping for 8s. Reason: PENDING
2024-12-05 13:38:50,358 Sleeping for 9s. Reason: PENDING
2024-12-05 13:38:59,616 Sleeping for 5s. Reason: PENDING
2024-12-05 13:39:04,873 Sleeping for 6s. Reason: PENDING
2024-12-05 13:39:11,135 Sleeping for 5s. Reason: PENDING
2024-12-05 13:39:16,395 Sleeping for 8s. Reason: PENDING
2024-12-05 13:39:24,652 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:39:30,905 Sleeping for 10s. Reason: RUNNING
2024-12-05 13:39:41,159 Sleeping for 10s. Reason: RUNNING
2024-12-05 13:39:51,422 Sleeping for 7s. Reason: RUNNING
2024-12-05 13:39:58,683 Sleeping for 9s. Reason: RUNNING
2024-12-05 13:40:07,939 Sleeping for 10s. Reason: RUNNING
2024-12-05 13:40:18,205 Sleeping for 7s. Reason: RUNNING
2024-12-05 13:40:25,469 Sleeping for 10s. Reason: RUNNING
2024-12-05 13:40:35,730 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:40:41,982 Sleeping for 9s. Reason: RUNNING
2024-12-05 13:40:51,270 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:40:56,522 Sleeping for 10s. Reason: RUNNING
2024-12-05 13:41:06,788 Sleeping for 10s. Reason: RUNNING
2024-12-05 13:41:17,053 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:41:23,307 Sleeping for 9s. Reason: RUNNING
2024-12-05 13:41:32,572 Sleeping for 9s. Reason: RUNNING
2024-12-05 13:41:41,827 Sleeping for 9s. Reason: RUNNING
2024-12-05 13:41:51,093 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:41:57,357 Sleeping for 7s. Reason: RUNNING
2024-12-05 13:42:04,621 Sleeping for 7s. Reason: RUNNING
2024-12-05 13:42:11,880 Sleeping for 10s. Reason: RUNNING
2024-12-05 13:42:23,640 Sleeping for 8s. Reason: PENDING
2024-12-05 13:42:31,896 Sleeping for 7s. Reason: RUNNING
2024-12-05 13:42:39,153 Sleeping for 9s. Reason: RUNNING
2024-12-05 13:42:48,409 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:42:53,663 Sleeping for 9s. Reason: RUNNING
2024-12-05 13:43:02,914 Sleeping for 9s. Reason: RUNNING
2024-12-05 13:43:12,177 Sleeping for 7s. Reason: RUNNING
2024-12-05 13:43:19,439 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:43:24,697 Sleeping for 6s. Reason: RUNNING
2024-12-05 13:43:30,957 Sleeping for 7s. Reason: RUNNING
2024-12-05 13:43:38,212 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:43:43,471 Sleeping for 8s. Reason: RUNNING
2024-12-05 13:43:51,737 Sleeping for 5s. Reason: RUNNING
2024-12-05 13:43:56,992 Sleeping for 10s. Reason: RUNNING
2024-12-05 13:44:10,102 Setting max_seq=508, max_extra_seq=2048
2024-12-05 13:47:03,906 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.5 pTM=0.547 ipTM=0.479
2024-12-05 13:47:30,616 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.4 pTM=0.519 ipTM=0.216 tol=13.8
2024-12-05 13:47:57,427 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.8 pTM=0.513 ipTM=0.172 tol=14.3
2024-12-05 13:48:24,323 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.6 pTM=0.507 ipTM=0.162 tol=9.27
2024-12-05 13:48:51,246 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.6 pTM=0.511 ipTM=0.185 tol=7.49
2024-12-05 13:49:18,225 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.3 pTM=0.501 ipTM=0.163 tol=5.28
2024-12-05 13:49:45,226 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.7 pTM=0.506 ipTM=0.163 tol=4.17
2024-12-05 13:50:12,240 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.6 pTM=0.503 ipTM=0.166 tol=1.91
2024-12-05 13:50:39,286 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.8 pTM=0.504 ipTM=0.164 tol=1.88
2024-12-05 13:51:06,331 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.6 pTM=0.503 ipTM=0.17 tol=2.59
2024-12-05 13:51:33,383 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.8 pTM=0.502 ipTM=0.169 tol=2.56
2024-12-05 13:52:00,435 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.5 pTM=0.501 ipTM=0.163 tol=2.09
2024-12-05 13:52:27,493 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.5 pTM=0.501 ipTM=0.168 tol=1.89
2024-12-05 13:52:54,553 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.5 pTM=0.501 ipTM=0.163 tol=2.7
2024-12-05 13:53:21,629 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.6 pTM=0.504 ipTM=0.174 tol=3.85
2024-12-05 13:53:48,730 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.6 pTM=0.503 ipTM=0.164 tol=4.36
2024-12-05 13:54:15,828 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.6 pTM=0.503 ipTM=0.167 tol=4.18
2024-12-05 13:54:42,934 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.6 pTM=0.5 ipTM=0.166 tol=3.84
2024-12-05 13:55:10,014 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.6 pTM=0.501 ipTM=0.174 tol=3.92
2024-12-05 13:55:37,117 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.6 pTM=0.5 ipTM=0.167 tol=3.46
2024-12-05 13:56:04,193 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.2 pTM=0.498 ipTM=0.17 tol=3.5
2024-12-05 13:56:31,271 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.6 pTM=0.5 ipTM=0.164 tol=1.73
2024-12-05 13:56:58,364 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.8 pTM=0.505 ipTM=0.176 tol=3.62
2024-12-05 13:57:25,441 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.7 pTM=0.502 ipTM=0.163 tol=4.36
2024-12-05 13:57:52,515 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.4 pTM=0.501 ipTM=0.168 tol=3.41
2024-12-05 13:58:19,574 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.2 pTM=0.499 ipTM=0.162 tol=2.51
2024-12-05 13:58:46,637 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.2 pTM=0.499 ipTM=0.171 tol=3.98
2024-12-05 13:59:13,699 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.4 pTM=0.501 ipTM=0.165 tol=3.91
2024-12-05 13:59:40,773 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.2 pTM=0.5 ipTM=0.164 tol=3.94
2024-12-05 14:00:07,826 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.2 pTM=0.5 ipTM=0.164 tol=4.26
2024-12-05 14:00:34,895 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.4 pTM=0.502 ipTM=0.166 tol=3.71
2024-12-05 14:00:34,896 alphafold2_multimer_v3_model_1_seed_000 took 979.4s (30 recycles)
2024-12-05 14:01:02,736 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.7 pTM=0.493 ipTM=0.168
2024-12-05 14:01:29,850 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.7 pTM=0.538 ipTM=0.212 tol=17.9
2024-12-05 14:01:56,969 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.5 pTM=0.532 ipTM=0.196 tol=8.55
2024-12-05 14:02:24,091 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.3 pTM=0.528 ipTM=0.193 tol=6.54
2024-12-05 14:02:51,221 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.4 pTM=0.53 ipTM=0.189 tol=7.82
2024-12-05 14:03:18,325 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.2 pTM=0.526 ipTM=0.18 tol=7.87
2024-12-05 14:03:45,436 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.6 pTM=0.535 ipTM=0.189 tol=3.42
2024-12-05 14:04:12,563 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.7 pTM=0.532 ipTM=0.184 tol=1.77
2024-12-05 14:04:39,673 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.7 pTM=0.529 ipTM=0.176 tol=1.54
2024-12-05 14:05:06,783 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.9 pTM=0.529 ipTM=0.175 tol=1.19
2024-12-05 14:05:33,886 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.9 pTM=0.529 ipTM=0.17 tol=1.36
2024-12-05 14:06:00,995 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.8 pTM=0.53 ipTM=0.172 tol=1.78
2024-12-05 14:06:28,088 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.6 pTM=0.529 ipTM=0.172 tol=1.03
2024-12-05 14:06:55,184 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.6 pTM=0.528 ipTM=0.169 tol=1.05
2024-12-05 14:07:22,296 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.8 pTM=0.532 ipTM=0.177 tol=1.03
2024-12-05 14:07:49,404 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69 pTM=0.533 ipTM=0.179 tol=1.44
2024-12-05 14:08:16,514 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.9 pTM=0.531 ipTM=0.173 tol=1.05
2024-12-05 14:08:43,628 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.7 pTM=0.53 ipTM=0.178 tol=0.897
2024-12-05 14:09:10,729 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.7 pTM=0.53 ipTM=0.176 tol=1.2
2024-12-05 14:09:37,816 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.8 pTM=0.531 ipTM=0.177 tol=1.27
2024-12-05 14:10:04,902 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.8 pTM=0.532 ipTM=0.185 tol=0.721
2024-12-05 14:10:31,976 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.8 pTM=0.53 ipTM=0.177 tol=1.07
2024-12-05 14:10:59,071 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.8 pTM=0.534 ipTM=0.184 tol=1.6
2024-12-05 14:11:26,150 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.8 pTM=0.531 ipTM=0.175 tol=1.01
2024-12-05 14:11:53,231 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.7 pTM=0.532 ipTM=0.182 tol=1.04
2024-12-05 14:12:20,342 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.7 pTM=0.53 ipTM=0.172 tol=1.53
2024-12-05 14:12:47,443 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.8 pTM=0.53 ipTM=0.178 tol=1.26
2024-12-05 14:13:14,551 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.6 pTM=0.531 ipTM=0.176 tol=0.786
2024-12-05 14:13:41,667 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.9 pTM=0.533 ipTM=0.18 tol=1.59
2024-12-05 14:14:08,761 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.7 pTM=0.53 ipTM=0.173 tol=1.93
2024-12-05 14:14:35,854 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.8 pTM=0.533 ipTM=0.181 tol=1.91
2024-12-05 14:14:35,855 alphafold2_multimer_v3_model_2_seed_000 took 840.2s (30 recycles)
2024-12-05 14:15:03,735 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.2 pTM=0.537 ipTM=0.474
2024-12-05 14:15:30,901 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.7 pTM=0.479 ipTM=0.159 tol=20
2024-12-05 14:15:57,999 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.1 pTM=0.518 ipTM=0.234 tol=12
2024-12-05 14:16:25,147 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.2 pTM=0.497 ipTM=0.152 tol=10.3
2024-12-05 14:16:52,344 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.5 pTM=0.501 ipTM=0.168 tol=5.61
2024-12-05 14:17:19,541 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.9 pTM=0.505 ipTM=0.173 tol=3.25
2024-12-05 14:17:46,711 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.2 pTM=0.513 ipTM=0.185 tol=3.04
2024-12-05 14:18:13,875 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.2 pTM=0.513 ipTM=0.19 tol=2.4
2024-12-05 14:18:40,973 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.2 pTM=0.518 ipTM=0.212 tol=2.27
2024-12-05 14:19:08,062 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.6 pTM=0.524 ipTM=0.23 tol=2.09
2024-12-05 14:19:35,189 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.4 pTM=0.517 ipTM=0.204 tol=2.63
2024-12-05 14:20:02,256 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.4 pTM=0.523 ipTM=0.228 tol=2
2024-12-05 14:20:29,306 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.4 pTM=0.519 ipTM=0.217 tol=2.25
2024-12-05 14:20:56,345 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.3 pTM=0.521 ipTM=0.224 tol=2.04
2024-12-05 14:21:23,417 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.4 pTM=0.52 ipTM=0.212 tol=2.29
2024-12-05 14:21:50,495 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.6 pTM=0.524 ipTM=0.231 tol=2.57
2024-12-05 14:22:17,581 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.4 pTM=0.518 ipTM=0.207 tol=2.6
2024-12-05 14:22:44,675 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.4 pTM=0.521 ipTM=0.229 tol=3.76
2024-12-05 14:23:11,770 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.2 pTM=0.517 ipTM=0.212 tol=3.49
2024-12-05 14:23:38,845 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.5 pTM=0.524 ipTM=0.241 tol=3.46
2024-12-05 14:24:05,939 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.4 pTM=0.521 ipTM=0.217 tol=3.07
2024-12-05 14:24:33,045 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.5 pTM=0.524 ipTM=0.234 tol=3.15
2024-12-05 14:25:00,174 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.4 pTM=0.52 ipTM=0.213 tol=2.61
2024-12-05 14:25:27,277 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.6 pTM=0.526 ipTM=0.243 tol=3.54
2024-12-05 14:25:54,382 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.3 pTM=0.519 ipTM=0.209 tol=1.92
2024-12-05 14:26:21,497 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.4 pTM=0.524 ipTM=0.238 tol=2.67
2024-12-05 14:26:48,612 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.2 pTM=0.514 ipTM=0.198 tol=2.18
2024-12-05 14:27:15,708 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.6 pTM=0.528 ipTM=0.241 tol=2.36
2024-12-05 14:27:42,806 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.6 pTM=0.521 ipTM=0.217 tol=1.66
2024-12-05 14:28:09,896 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.6 pTM=0.527 ipTM=0.246 tol=2
2024-12-05 14:28:37,006 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.6 pTM=0.52 ipTM=0.214 tol=1.49
2024-12-05 14:28:37,007 alphafold2_multimer_v3_model_3_seed_000 took 840.4s (30 recycles)
2024-12-05 14:29:04,769 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.2 pTM=0.495 ipTM=0.295
2024-12-05 14:29:31,913 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.4 pTM=0.469 ipTM=0.155 tol=10.2
2024-12-05 14:29:59,057 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.4 pTM=0.503 ipTM=0.158 tol=15.6
2024-12-05 14:30:26,191 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.6 pTM=0.504 ipTM=0.166 tol=6.96
2024-12-05 14:30:53,325 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.5 pTM=0.503 ipTM=0.168 tol=9.41
2024-12-05 14:31:20,460 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.4 pTM=0.504 ipTM=0.172 tol=3.11
2024-12-05 14:31:47,605 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.4 pTM=0.501 ipTM=0.157 tol=4.96
2024-12-05 14:32:14,755 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.7 pTM=0.505 ipTM=0.162 tol=5.51
2024-12-05 14:32:41,899 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.7 pTM=0.503 ipTM=0.164 tol=4.97
2024-12-05 14:33:09,036 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.6 pTM=0.505 ipTM=0.17 tol=3.03
2024-12-05 14:33:36,201 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.5 pTM=0.499 ipTM=0.157 tol=5.65
2024-12-05 14:34:03,345 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.8 pTM=0.504 ipTM=0.169 tol=4.29
2024-12-05 14:34:30,495 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.6 pTM=0.506 ipTM=0.177 tol=3.07
2024-12-05 14:34:57,660 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.9 pTM=0.51 ipTM=0.179 tol=2.28
2024-12-05 14:35:24,816 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.7 pTM=0.512 ipTM=0.182 tol=2.2
2024-12-05 14:35:51,971 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.7 pTM=0.509 ipTM=0.178 tol=1.73
2024-12-05 14:36:19,114 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.8 pTM=0.51 ipTM=0.178 tol=1.89
2024-12-05 14:36:46,256 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.8 pTM=0.508 ipTM=0.179 tol=2.6
2024-12-05 14:37:13,406 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.7 pTM=0.507 ipTM=0.174 tol=2.36
2024-12-05 14:37:40,529 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.6 pTM=0.506 ipTM=0.168 tol=8.25
2024-12-05 14:38:07,652 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.6 pTM=0.507 ipTM=0.174 tol=4.79
2024-12-05 14:38:34,783 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.6 pTM=0.507 ipTM=0.178 tol=5.01
2024-12-05 14:39:01,919 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.4 pTM=0.506 ipTM=0.169 tol=5.86
2024-12-05 14:39:29,052 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.6 pTM=0.508 ipTM=0.175 tol=2.24
2024-12-05 14:39:56,189 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.3 pTM=0.504 ipTM=0.164 tol=3.32
2024-12-05 14:40:23,318 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.4 pTM=0.509 ipTM=0.176 tol=2.36
2024-12-05 14:40:50,469 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.4 pTM=0.506 ipTM=0.171 tol=2.53
2024-12-05 14:41:17,639 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.6 pTM=0.511 ipTM=0.176 tol=3.64
2024-12-05 14:41:44,790 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.7 pTM=0.51 ipTM=0.179 tol=3.06
2024-12-05 14:42:11,938 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.6 pTM=0.508 ipTM=0.177 tol=2.46
2024-12-05 14:42:39,089 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.5 pTM=0.505 ipTM=0.165 tol=3.88
2024-12-05 14:42:39,090 alphafold2_multimer_v3_model_4_seed_000 took 841.4s (30 recycles)
2024-12-05 14:43:06,971 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.8 pTM=0.468 ipTM=0.177
2024-12-05 14:43:34,065 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.4 pTM=0.5 ipTM=0.165 tol=20.1
2024-12-05 14:44:01,116 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.8 pTM=0.512 ipTM=0.175 tol=10.9
2024-12-05 14:44:28,211 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.9 pTM=0.508 ipTM=0.151 tol=9.15
2024-12-05 14:44:55,286 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67 pTM=0.514 ipTM=0.178 tol=7.32
2024-12-05 14:45:22,366 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.1 pTM=0.512 ipTM=0.161 tol=8.44
2024-12-05 14:45:49,453 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67 pTM=0.511 ipTM=0.151 tol=7.3
2024-12-05 14:46:16,525 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.2 pTM=0.514 ipTM=0.155 tol=6.08
2024-12-05 14:46:43,596 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.2 pTM=0.514 ipTM=0.154 tol=5.69
2024-12-05 14:47:10,667 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.3 pTM=0.514 ipTM=0.163 tol=2.44
2024-12-05 14:47:37,741 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.2 pTM=0.51 ipTM=0.151 tol=6.89
2024-12-05 14:48:04,840 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.4 pTM=0.512 ipTM=0.154 tol=7.18
2024-12-05 14:48:31,924 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.1 pTM=0.511 ipTM=0.154 tol=3.54
2024-12-05 14:48:59,081 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.2 pTM=0.51 ipTM=0.151 tol=4.72
2024-12-05 14:49:26,219 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.3 pTM=0.514 ipTM=0.159 tol=6.89
2024-12-05 14:49:53,350 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.3 pTM=0.514 ipTM=0.159 tol=3.32
2024-12-05 14:50:20,493 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.1 pTM=0.512 ipTM=0.158 tol=4.54
2024-12-05 14:50:47,632 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67 pTM=0.511 ipTM=0.159 tol=3.78
2024-12-05 14:51:14,778 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67 pTM=0.511 ipTM=0.159 tol=2.4
2024-12-05 14:51:41,899 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.1 pTM=0.512 ipTM=0.155 tol=3.18
2024-12-05 14:52:09,006 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.1 pTM=0.513 ipTM=0.16 tol=2.78
2024-12-05 14:52:36,091 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.2 pTM=0.512 ipTM=0.159 tol=3.63
2024-12-05 14:53:03,180 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.1 pTM=0.512 ipTM=0.157 tol=5.01
2024-12-05 14:53:30,255 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.9 pTM=0.512 ipTM=0.155 tol=4.2
2024-12-05 14:53:57,335 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.1 pTM=0.515 ipTM=0.156 tol=3.11
2024-12-05 14:54:24,419 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.1 pTM=0.513 ipTM=0.156 tol=2.81
2024-12-05 14:54:51,508 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.1 pTM=0.513 ipTM=0.157 tol=4.46
2024-12-05 14:55:18,608 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.1 pTM=0.514 ipTM=0.158 tol=4.54
2024-12-05 14:55:45,713 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.2 pTM=0.512 ipTM=0.156 tol=4.62
2024-12-05 14:56:12,810 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.9 pTM=0.51 ipTM=0.153 tol=3.72
2024-12-05 14:56:39,922 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67 pTM=0.512 ipTM=0.155 tol=5.02
2024-12-05 14:56:39,923 alphafold2_multimer_v3_model_5_seed_000 took 840.1s (30 recycles)
2024-12-05 14:56:40,632 reranking models by 'multimer' metric
2024-12-05 14:56:44,214 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 14:58:08,902 Relaxation took 88.3s
2024-12-05 14:58:08,902 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.6 pTM=0.52 ipTM=0.214
2024-12-05 14:59:22,939 Relaxation took 74.0s
2024-12-05 14:59:22,939 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.8 pTM=0.533 ipTM=0.181
2024-12-05 15:01:09,818 Relaxation took 106.9s
2024-12-05 15:01:09,818 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.5 pTM=0.505 ipTM=0.165
2024-12-05 15:02:26,074 Relaxation took 76.3s
2024-12-05 15:02:26,075 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.4 pTM=0.502 ipTM=0.166
2024-12-05 15:03:47,245 Relaxation took 81.2s
2024-12-05 15:03:47,245 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67 pTM=0.512 ipTM=0.155
2024-12-05 15:03:49,379 Done