2024-12-05 14:04:32,778 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 14:04:34,781 Running on GPU
2024-12-05 14:04:39,320 Found 6 citations for tools or databases
2024-12-05 14:04:39,320 Query 1/1: DDB1_DET1 (length 1690)
2024-12-05 14:04:44,797 Setting max_seq=508, max_extra_seq=2048
2024-12-05 14:09:56,336 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=88.1 pTM=0.841 ipTM=0.873
2024-12-05 14:11:17,244 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=90.1 pTM=0.875 ipTM=0.897 tol=1.52
2024-12-05 14:12:38,186 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=89.9 pTM=0.863 ipTM=0.899 tol=0.347
2024-12-05 14:12:38,188 alphafold2_multimer_v3_model_1_seed_000 took 452.3s (2 recycles)
2024-12-05 14:14:01,567 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=88.7 pTM=0.855 ipTM=0.88
2024-12-05 14:15:22,620 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=90 pTM=0.875 ipTM=0.899 tol=2.6
2024-12-05 14:16:43,555 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=90.2 pTM=0.876 ipTM=0.895 tol=1.07
2024-12-05 14:18:04,506 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=90.4 pTM=0.876 ipTM=0.897 tol=0.182
2024-12-05 14:18:04,507 alphafold2_multimer_v3_model_2_seed_000 took 324.0s (3 recycles)
2024-12-05 14:19:27,767 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=89.1 pTM=0.857 ipTM=0.876
2024-12-05 14:20:48,705 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=90.3 pTM=0.875 ipTM=0.894 tol=2.68
2024-12-05 14:22:09,628 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=90.6 pTM=0.874 ipTM=0.895 tol=1.12
2024-12-05 14:23:30,462 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=90.6 pTM=0.872 ipTM=0.895 tol=0.344
2024-12-05 14:23:30,464 alphafold2_multimer_v3_model_3_seed_000 took 323.6s (3 recycles)
2024-12-05 14:24:53,286 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=87.1 pTM=0.839 ipTM=0.871
2024-12-05 14:26:14,132 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=89.2 pTM=0.855 ipTM=0.894 tol=1.48
2024-12-05 14:27:34,925 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=89.7 pTM=0.855 ipTM=0.895 tol=0.815
2024-12-05 14:28:55,578 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=89.4 pTM=0.857 ipTM=0.891 tol=0.206
2024-12-05 14:28:55,580 alphafold2_multimer_v3_model_4_seed_000 took 322.7s (3 recycles)
2024-12-05 14:30:18,731 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=88.4 pTM=0.849 ipTM=0.883
2024-12-05 14:31:39,628 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=89.6 pTM=0.853 ipTM=0.896 tol=1.3
2024-12-05 14:33:00,524 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=89.9 pTM=0.86 ipTM=0.897 tol=1.17
2024-12-05 14:34:21,292 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=89.9 pTM=0.859 ipTM=0.896 tol=0.287
2024-12-05 14:34:21,294 alphafold2_multimer_v3_model_5_seed_000 took 323.3s (3 recycles)
2024-12-05 14:34:23,676 reranking models by 'multimer' metric
2024-12-05 14:34:29,214 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 14:36:22,615 Relaxation took 118.9s
2024-12-05 14:36:22,615 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=90.4 pTM=0.876 ipTM=0.897
2024-12-05 14:38:13,398 Relaxation took 110.8s
2024-12-05 14:38:13,398 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=89.9 pTM=0.863 ipTM=0.899
2024-12-05 14:40:03,821 Relaxation took 110.4s
2024-12-05 14:40:03,821 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=90.6 pTM=0.872 ipTM=0.895
2024-12-05 14:42:20,295 Relaxation took 136.5s
2024-12-05 14:42:20,295 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=89.9 pTM=0.859 ipTM=0.896
2024-12-05 14:45:06,603 Relaxation took 166.3s
2024-12-05 14:45:06,603 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=89.4 pTM=0.857 ipTM=0.891
2024-12-05 14:45:11,460 Done