2024-12-05 14:05:06,213 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-05 14:05:06,535 Running on GPU 2024-12-05 14:05:08,229 Found 6 citations for tools or databases 2024-12-05 14:05:08,229 Query 1/1: DDB2_FGL1 (length 739) 2024-12-05 14:05:08,534 Sleeping for 8s. Reason: PENDING 2024-12-05 14:05:16,795 Sleeping for 5s. Reason: PENDING 2024-12-05 14:05:22,051 Sleeping for 8s. Reason: PENDING 2024-12-05 14:05:30,316 Sleeping for 7s. Reason: PENDING 2024-12-05 14:05:37,589 Sleeping for 5s. Reason: RUNNING 2024-12-05 14:05:42,841 Sleeping for 5s. Reason: RUNNING 2024-12-05 14:05:48,096 Sleeping for 10s. Reason: RUNNING 2024-12-05 14:05:58,353 Sleeping for 8s. Reason: RUNNING 2024-12-05 14:06:06,615 Sleeping for 7s. Reason: RUNNING 2024-12-05 14:06:13,876 Sleeping for 5s. Reason: RUNNING 2024-12-05 14:06:19,128 Sleeping for 9s. Reason: RUNNING 2024-12-05 14:06:28,392 Sleeping for 10s. Reason: RUNNING 2024-12-05 14:06:38,658 Sleeping for 8s. Reason: RUNNING 2024-12-05 14:06:46,933 Sleeping for 6s. Reason: RUNNING 2024-12-05 14:06:53,187 Sleeping for 8s. Reason: RUNNING 2024-12-05 14:07:01,444 Sleeping for 7s. Reason: RUNNING 2024-12-05 14:07:08,703 Sleeping for 6s. Reason: RUNNING 2024-12-05 14:07:14,955 Sleeping for 6s. Reason: RUNNING 2024-12-05 14:07:21,218 Sleeping for 10s. Reason: RUNNING 2024-12-05 14:07:31,477 Sleeping for 8s. Reason: RUNNING 2024-12-05 14:07:39,728 Sleeping for 8s. Reason: RUNNING 2024-12-05 14:07:47,981 Sleeping for 10s. Reason: RUNNING 2024-12-05 14:07:58,241 Sleeping for 9s. Reason: RUNNING 2024-12-05 14:08:07,499 Sleeping for 5s. Reason: RUNNING 2024-12-05 14:08:13,810 Sleeping for 5s. Reason: PENDING 2024-12-05 14:08:19,065 Sleeping for 7s. Reason: RUNNING 2024-12-05 14:08:26,322 Sleeping for 7s. Reason: RUNNING 2024-12-05 14:08:33,575 Sleeping for 7s. Reason: RUNNING 2024-12-05 14:08:40,839 Sleeping for 5s. Reason: RUNNING 2024-12-05 14:08:46,095 Sleeping for 6s. Reason: RUNNING 2024-12-05 14:08:52,354 Sleeping for 9s. Reason: RUNNING 2024-12-05 14:09:01,614 Sleeping for 6s. Reason: RUNNING 2024-12-05 14:09:07,877 Sleeping for 8s. Reason: RUNNING 2024-12-05 14:09:16,133 Sleeping for 10s. Reason: RUNNING 2024-12-05 14:09:26,399 Sleeping for 7s. Reason: RUNNING 2024-12-05 14:09:36,299 Setting max_seq=508, max_extra_seq=2048 2024-12-05 14:12:22,509 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=76.8 pTM=0.509 ipTM=0.149 2024-12-05 14:12:33,485 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=77.9 pTM=0.503 ipTM=0.147 tol=15.5 2024-12-05 14:12:44,406 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=77.8 pTM=0.51 ipTM=0.224 tol=3.95 2024-12-05 14:12:55,342 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=77.8 pTM=0.511 ipTM=0.165 tol=2.65 2024-12-05 14:13:06,334 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78.2 pTM=0.514 ipTM=0.174 tol=2.18 2024-12-05 14:13:17,336 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=77.9 pTM=0.512 ipTM=0.168 tol=2.46 2024-12-05 14:13:28,349 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=78.1 pTM=0.516 ipTM=0.172 tol=2.43 2024-12-05 14:13:39,369 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=78 pTM=0.511 ipTM=0.163 tol=0.924 2024-12-05 14:13:50,392 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77.9 pTM=0.513 ipTM=0.17 tol=0.681 2024-12-05 14:14:01,452 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=78.4 pTM=0.511 ipTM=0.179 tol=0.794 2024-12-05 14:14:12,487 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=78 pTM=0.515 ipTM=0.17 tol=1.04 2024-12-05 14:14:23,548 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=78.3 pTM=0.512 ipTM=0.164 tol=1.17 2024-12-05 14:14:34,595 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=77.9 pTM=0.513 ipTM=0.171 tol=3.45 2024-12-05 14:14:45,676 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=78.2 pTM=0.511 ipTM=0.161 tol=4.25 2024-12-05 14:14:56,737 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=78 pTM=0.517 ipTM=0.178 tol=2.96 2024-12-05 14:15:07,812 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=78.2 pTM=0.511 ipTM=0.161 tol=2.17 2024-12-05 14:15:18,870 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=78 pTM=0.517 ipTM=0.175 tol=1.82 2024-12-05 14:15:29,945 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=78.3 pTM=0.513 ipTM=0.182 tol=0.773 2024-12-05 14:15:41,022 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=78.2 pTM=0.519 ipTM=0.177 tol=1.01 2024-12-05 14:15:52,101 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=78.4 pTM=0.512 ipTM=0.169 tol=1.37 2024-12-05 14:16:03,151 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=78 pTM=0.516 ipTM=0.172 tol=2.7 2024-12-05 14:16:14,217 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=78.2 pTM=0.512 ipTM=0.203 tol=3.21 2024-12-05 14:16:25,300 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=78.2 pTM=0.517 ipTM=0.198 tol=1.02 2024-12-05 14:16:36,407 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=78.1 pTM=0.511 ipTM=0.185 tol=1.87 2024-12-05 14:16:47,520 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=78.3 pTM=0.517 ipTM=0.189 tol=1.51 2024-12-05 14:16:58,628 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=78.1 pTM=0.511 ipTM=0.191 tol=1.98 2024-12-05 14:17:09,721 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=78.1 pTM=0.515 ipTM=0.182 tol=0.846 2024-12-05 14:17:20,826 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=78.2 pTM=0.511 ipTM=0.17 tol=1.16 2024-12-05 14:17:31,927 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=78.1 pTM=0.516 ipTM=0.172 tol=0.903 2024-12-05 14:17:43,015 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=78.1 pTM=0.512 ipTM=0.164 tol=1.08 2024-12-05 14:17:54,112 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=78 pTM=0.515 ipTM=0.171 tol=1.77 2024-12-05 14:17:54,113 alphafold2_multimer_v3_model_1_seed_000 took 492.6s (30 recycles) 2024-12-05 14:18:05,599 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=76.9 pTM=0.518 ipTM=0.166 2024-12-05 14:18:16,717 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=78.2 pTM=0.527 ipTM=0.174 tol=8.11 2024-12-05 14:18:27,854 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=78.4 pTM=0.518 ipTM=0.166 tol=3.94 2024-12-05 14:18:38,972 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=78.7 pTM=0.522 ipTM=0.171 tol=3.6 2024-12-05 14:18:50,086 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=78.9 pTM=0.521 ipTM=0.171 tol=4.16 2024-12-05 14:19:01,203 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.8 pTM=0.521 ipTM=0.179 tol=4.07 2024-12-05 14:19:12,335 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.6 pTM=0.519 ipTM=0.171 tol=3.52 2024-12-05 14:19:23,454 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=78.6 pTM=0.522 ipTM=0.179 tol=2.99 2024-12-05 14:19:34,560 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=78.6 pTM=0.518 ipTM=0.176 tol=2.39 2024-12-05 14:19:45,676 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=78.7 pTM=0.521 ipTM=0.178 tol=2.57 2024-12-05 14:19:56,779 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=78.6 pTM=0.52 ipTM=0.175 tol=1.92 2024-12-05 14:20:07,894 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=78.6 pTM=0.522 ipTM=0.178 tol=1.17 2024-12-05 14:20:19,017 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=78.8 pTM=0.518 ipTM=0.171 tol=1.56 2024-12-05 14:20:30,136 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.8 pTM=0.522 ipTM=0.177 tol=1.81 2024-12-05 14:20:41,240 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=78.8 pTM=0.52 ipTM=0.175 tol=2.02 2024-12-05 14:20:52,328 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.7 pTM=0.523 ipTM=0.18 tol=2.71 2024-12-05 14:21:03,410 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.7 pTM=0.519 ipTM=0.174 tol=3.12 2024-12-05 14:21:14,499 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=78.8 pTM=0.525 ipTM=0.181 tol=2.31 2024-12-05 14:21:25,598 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=78.9 pTM=0.521 ipTM=0.176 tol=2.75 2024-12-05 14:21:36,703 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=78.7 pTM=0.525 ipTM=0.18 tol=2.22 2024-12-05 14:21:47,787 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78.7 pTM=0.52 ipTM=0.173 tol=1.39 2024-12-05 14:21:58,871 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=78.6 pTM=0.523 ipTM=0.176 tol=2.47 2024-12-05 14:22:09,975 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.7 pTM=0.52 ipTM=0.17 tol=4.28 2024-12-05 14:22:21,065 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.6 pTM=0.521 ipTM=0.182 tol=5.5 2024-12-05 14:22:32,147 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=78.8 pTM=0.52 ipTM=0.174 tol=3.49 2024-12-05 14:22:43,218 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78.6 pTM=0.521 ipTM=0.172 tol=2.37 2024-12-05 14:22:54,295 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.7 pTM=0.52 ipTM=0.17 tol=4.41 2024-12-05 14:23:05,371 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.6 pTM=0.521 ipTM=0.172 tol=2.7 2024-12-05 14:23:16,463 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=78.7 pTM=0.52 ipTM=0.167 tol=2.64 2024-12-05 14:23:27,535 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=78.6 pTM=0.522 ipTM=0.173 tol=1.65 2024-12-05 14:23:38,610 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.6 pTM=0.52 ipTM=0.17 tol=1.66 2024-12-05 14:23:38,611 alphafold2_multimer_v3_model_2_seed_000 took 344.1s (30 recycles) 2024-12-05 14:23:50,091 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.3 pTM=0.553 ipTM=0.266 2024-12-05 14:24:01,220 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.6 pTM=0.511 ipTM=0.148 tol=8.41 2024-12-05 14:24:12,311 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=76.9 pTM=0.533 ipTM=0.188 tol=5.32 2024-12-05 14:24:23,420 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=76.8 pTM=0.521 ipTM=0.18 tol=5.4 2024-12-05 14:24:34,525 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=77.2 pTM=0.543 ipTM=0.203 tol=4.27 2024-12-05 14:24:45,651 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.9 pTM=0.524 ipTM=0.176 tol=4.5 2024-12-05 14:24:56,787 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=77 pTM=0.525 ipTM=0.171 tol=4.31 2024-12-05 14:25:07,911 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=76.8 pTM=0.526 ipTM=0.173 tol=6.5 2024-12-05 14:25:19,034 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=77 pTM=0.538 ipTM=0.192 tol=2.65 2024-12-05 14:25:30,145 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=76.9 pTM=0.527 ipTM=0.175 tol=1.72 2024-12-05 14:25:41,259 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=76.8 pTM=0.537 ipTM=0.185 tol=2.54 2024-12-05 14:25:52,378 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=76.9 pTM=0.523 ipTM=0.164 tol=3.98 2024-12-05 14:26:03,498 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=76.8 pTM=0.538 ipTM=0.191 tol=2.9 2024-12-05 14:26:14,627 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=76.9 pTM=0.525 ipTM=0.167 tol=5.3 2024-12-05 14:26:25,739 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=76.9 pTM=0.543 ipTM=0.207 tol=6.26 2024-12-05 14:26:36,877 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=76.9 pTM=0.522 ipTM=0.155 tol=9.21 2024-12-05 14:26:47,986 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=76.9 pTM=0.542 ipTM=0.205 tol=5.19 2024-12-05 14:26:59,103 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77 pTM=0.527 ipTM=0.165 tol=5.95 2024-12-05 14:27:10,196 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=76.8 pTM=0.536 ipTM=0.183 tol=2.78 2024-12-05 14:27:21,300 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=76.6 pTM=0.526 ipTM=0.171 tol=2.04 2024-12-05 14:27:32,423 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=76.8 pTM=0.535 ipTM=0.182 tol=2.67 2024-12-05 14:27:43,538 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=76.6 pTM=0.526 ipTM=0.166 tol=1.47 2024-12-05 14:27:54,665 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=76.9 pTM=0.535 ipTM=0.178 tol=1.84 2024-12-05 14:28:05,781 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=76.7 pTM=0.527 ipTM=0.171 tol=5.45 2024-12-05 14:28:16,886 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.1 pTM=0.538 ipTM=0.187 tol=2.02 2024-12-05 14:28:27,989 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76.7 pTM=0.523 ipTM=0.169 tol=1.68 2024-12-05 14:28:39,093 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76.7 pTM=0.529 ipTM=0.178 tol=2.6 2024-12-05 14:28:50,209 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=76.8 pTM=0.521 ipTM=0.168 tol=4.74 2024-12-05 14:29:01,315 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=76.7 pTM=0.535 ipTM=0.182 tol=4.99 2024-12-05 14:29:12,469 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=76.7 pTM=0.527 ipTM=0.172 tol=4.24 2024-12-05 14:29:23,645 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=76.9 pTM=0.541 ipTM=0.195 tol=3.56 2024-12-05 14:29:23,645 alphafold2_multimer_v3_model_3_seed_000 took 344.7s (30 recycles) 2024-12-05 14:29:35,155 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.4 pTM=0.556 ipTM=0.261 2024-12-05 14:29:46,329 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.1 pTM=0.51 ipTM=0.148 tol=4.86 2024-12-05 14:29:57,483 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=76.9 pTM=0.515 ipTM=0.156 tol=8.05 2024-12-05 14:30:08,627 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=76.8 pTM=0.514 ipTM=0.16 tol=7.82 2024-12-05 14:30:19,796 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=77.1 pTM=0.514 ipTM=0.157 tol=3.65 2024-12-05 14:30:30,939 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=76.7 pTM=0.515 ipTM=0.161 tol=2.56 2024-12-05 14:30:42,090 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=77.1 pTM=0.513 ipTM=0.157 tol=4.57 2024-12-05 14:30:53,233 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77.1 pTM=0.517 ipTM=0.159 tol=2.79 2024-12-05 14:31:04,370 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=77 pTM=0.515 ipTM=0.165 tol=10.1 2024-12-05 14:31:15,484 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.1 pTM=0.518 ipTM=0.167 tol=2.59 2024-12-05 14:31:26,625 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.2 pTM=0.518 ipTM=0.162 tol=5.35 2024-12-05 14:31:37,770 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.2 pTM=0.521 ipTM=0.163 tol=4.38 2024-12-05 14:31:48,907 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.1 pTM=0.515 ipTM=0.162 tol=2.83 2024-12-05 14:32:00,068 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.4 pTM=0.519 ipTM=0.164 tol=3.68 2024-12-05 14:32:11,212 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=77.2 pTM=0.519 ipTM=0.163 tol=3.92 2024-12-05 14:32:22,357 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=77.5 pTM=0.52 ipTM=0.161 tol=5.62 2024-12-05 14:32:33,480 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.6 pTM=0.521 ipTM=0.165 tol=4.87 2024-12-05 14:32:44,597 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.6 pTM=0.528 ipTM=0.164 tol=5.67 2024-12-05 14:32:55,736 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=77.9 pTM=0.521 ipTM=0.16 tol=2.44 2024-12-05 14:33:06,867 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.7 pTM=0.527 ipTM=0.17 tol=3.23 2024-12-05 14:33:17,992 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.6 pTM=0.519 ipTM=0.161 tol=3.04 2024-12-05 14:33:29,133 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.5 pTM=0.525 ipTM=0.168 tol=3.53 2024-12-05 14:33:40,274 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.5 pTM=0.522 ipTM=0.163 tol=2.03 2024-12-05 14:33:51,410 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=77.4 pTM=0.522 ipTM=0.164 tol=2.32 2024-12-05 14:34:02,541 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.6 pTM=0.522 ipTM=0.166 tol=1.27 2024-12-05 14:34:13,643 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.2 pTM=0.522 ipTM=0.166 tol=5.72 2024-12-05 14:34:24,764 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.4 pTM=0.525 ipTM=0.164 tol=3.12 2024-12-05 14:34:35,901 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=77.7 pTM=0.523 ipTM=0.162 tol=3.76 2024-12-05 14:34:47,029 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=77.5 pTM=0.53 ipTM=0.169 tol=2.81 2024-12-05 14:34:58,153 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.6 pTM=0.524 ipTM=0.162 tol=2.96 2024-12-05 14:35:09,257 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.4 pTM=0.526 ipTM=0.167 tol=2.43 2024-12-05 14:35:09,258 alphafold2_multimer_v3_model_4_seed_000 took 345.3s (30 recycles) 2024-12-05 14:35:20,746 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75 pTM=0.535 ipTM=0.194 2024-12-05 14:35:31,890 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=76.9 pTM=0.517 ipTM=0.281 tol=11.8 2024-12-05 14:35:43,029 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=77.3 pTM=0.554 ipTM=0.224 tol=4.25 2024-12-05 14:35:54,196 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=77.5 pTM=0.53 ipTM=0.166 tol=2.42 2024-12-05 14:36:05,353 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=77.3 pTM=0.528 ipTM=0.171 tol=1.72 2024-12-05 14:36:16,513 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=77.4 pTM=0.525 ipTM=0.26 tol=2.34 2024-12-05 14:36:27,676 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=77.4 pTM=0.531 ipTM=0.176 tol=2.11 2024-12-05 14:36:38,842 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=77.3 pTM=0.521 ipTM=0.16 tol=2.91 2024-12-05 14:36:49,998 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=77.1 pTM=0.523 ipTM=0.177 tol=2.2 2024-12-05 14:37:01,159 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=77.3 pTM=0.52 ipTM=0.202 tol=2.19 2024-12-05 14:37:12,308 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76.9 pTM=0.526 ipTM=0.174 tol=1.65 2024-12-05 14:37:23,461 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=77 pTM=0.522 ipTM=0.175 tol=1.96 2024-12-05 14:37:34,631 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=77 pTM=0.52 ipTM=0.167 tol=2.06 2024-12-05 14:37:45,826 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=77.2 pTM=0.524 ipTM=0.192 tol=0.812 2024-12-05 14:37:57,006 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=77.1 pTM=0.525 ipTM=0.172 tol=1.29 2024-12-05 14:38:08,192 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=77.1 pTM=0.524 ipTM=0.213 tol=1.62 2024-12-05 14:38:19,364 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76.9 pTM=0.531 ipTM=0.181 tol=1.41 2024-12-05 14:38:30,550 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=77.1 pTM=0.526 ipTM=0.175 tol=2.47 2024-12-05 14:38:41,728 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=77.2 pTM=0.524 ipTM=0.166 tol=1.74 2024-12-05 14:38:52,903 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=77.1 pTM=0.525 ipTM=0.177 tol=2.49 2024-12-05 14:39:04,069 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=76.9 pTM=0.523 ipTM=0.17 tol=1.41 2024-12-05 14:39:15,247 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=76.9 pTM=0.524 ipTM=0.175 tol=1.06 2024-12-05 14:39:26,428 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=77.1 pTM=0.523 ipTM=0.174 tol=1.93 2024-12-05 14:39:37,593 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=77 pTM=0.52 ipTM=0.174 tol=1.29 2024-12-05 14:39:48,769 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=76.9 pTM=0.524 ipTM=0.181 tol=2.45 2024-12-05 14:39:59,957 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76.9 pTM=0.521 ipTM=0.172 tol=1.74 2024-12-05 14:40:11,134 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=76.9 pTM=0.521 ipTM=0.175 tol=1.66 2024-12-05 14:40:22,308 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=77 pTM=0.519 ipTM=0.17 tol=1.43 2024-12-05 14:40:33,481 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=77 pTM=0.525 ipTM=0.176 tol=1.81 2024-12-05 14:40:44,662 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=77 pTM=0.525 ipTM=0.174 tol=1.82 2024-12-05 14:40:55,835 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.9 pTM=0.522 ipTM=0.205 tol=1.28 2024-12-05 14:40:55,836 alphafold2_multimer_v3_model_5_seed_000 took 346.2s (30 recycles) 2024-12-05 14:40:56,182 reranking models by 'multimer' metric 2024-12-05 14:40:59,384 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-05 14:41:55,561 Relaxation took 59.4s 2024-12-05 14:41:55,561 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.9 pTM=0.522 ipTM=0.205 2024-12-05 14:42:22,738 Relaxation took 27.2s 2024-12-05 14:42:22,739 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.9 pTM=0.541 ipTM=0.195 2024-12-05 14:42:45,200 Relaxation took 22.5s 2024-12-05 14:42:45,200 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=78 pTM=0.515 ipTM=0.171 2024-12-05 14:43:35,239 Relaxation took 50.0s 2024-12-05 14:43:35,239 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.6 pTM=0.52 ipTM=0.17 2024-12-05 14:44:20,048 Relaxation took 44.8s 2024-12-05 14:44:20,048 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.4 pTM=0.526 ipTM=0.167 2024-12-05 14:44:21,433 Done