2024-12-05 14:16:09,678 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 14:16:10,152 Running on GPU
2024-12-05 14:16:14,153 Found 6 citations for tools or databases
2024-12-05 14:16:14,153 Query 1/1: DDB2_PDRG1 (length 560)
2024-12-05 14:16:14,438 Sleeping for 5s. Reason: PENDING
2024-12-05 14:16:19,689 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:16:25,959 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:16:31,216 Sleeping for 8s. Reason: RUNNING
2024-12-05 14:16:39,474 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:16:48,736 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:16:58,004 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:17:07,265 Sleeping for 8s. Reason: RUNNING
2024-12-05 14:17:15,533 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:17:25,794 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:17:32,046 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:17:38,297 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:17:48,554 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:17:53,808 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:18:04,067 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:18:09,327 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:18:20,578 Sleeping for 10s. Reason: PENDING
2024-12-05 14:18:30,836 Sleeping for 10s. Reason: PENDING
2024-12-05 14:18:41,098 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:18:51,364 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:19:01,624 Sleeping for 8s. Reason: RUNNING
2024-12-05 14:19:09,882 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:19:16,143 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:19:22,395 Sleeping for 8s. Reason: RUNNING
2024-12-05 14:19:30,650 Sleeping for 8s. Reason: RUNNING
2024-12-05 14:19:40,477 Setting max_seq=508, max_extra_seq=2048
2024-12-05 14:21:39,961 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70.9 pTM=0.636 ipTM=0.187
2024-12-05 14:21:46,166 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.6 pTM=0.624 ipTM=0.131 tol=9.42
2024-12-05 14:21:52,377 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.1 pTM=0.624 ipTM=0.143 tol=13.3
2024-12-05 14:21:58,573 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.3 pTM=0.633 ipTM=0.179 tol=3.48
2024-12-05 14:22:04,779 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70 pTM=0.629 ipTM=0.161 tol=3.03
2024-12-05 14:22:10,987 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.7 pTM=0.626 ipTM=0.143 tol=2.09
2024-12-05 14:22:17,206 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.6 pTM=0.626 ipTM=0.144 tol=2.58
2024-12-05 14:22:23,429 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70 pTM=0.634 ipTM=0.178 tol=1.33
2024-12-05 14:22:29,647 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.4 pTM=0.635 ipTM=0.19 tol=2.06
2024-12-05 14:22:35,877 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.1 pTM=0.635 ipTM=0.178 tol=3.96
2024-12-05 14:22:42,099 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.4 pTM=0.631 ipTM=0.167 tol=1.53
2024-12-05 14:22:48,324 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.1 pTM=0.633 ipTM=0.178 tol=2.05
2024-12-05 14:22:54,563 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.9 pTM=0.63 ipTM=0.165 tol=1.39
2024-12-05 14:23:00,799 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.4 pTM=0.63 ipTM=0.162 tol=1.47
2024-12-05 14:23:07,042 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.6 pTM=0.628 ipTM=0.154 tol=3.48
2024-12-05 14:23:13,282 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68.6 pTM=0.633 ipTM=0.185 tol=8.64
2024-12-05 14:23:19,528 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.2 pTM=0.627 ipTM=0.152 tol=2.84
2024-12-05 14:23:25,764 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68.8 pTM=0.628 ipTM=0.164 tol=3.35
2024-12-05 14:23:32,011 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69 pTM=0.629 ipTM=0.163 tol=4.34
2024-12-05 14:23:38,252 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.1 pTM=0.626 ipTM=0.155 tol=2.82
2024-12-05 14:23:44,497 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.9 pTM=0.625 ipTM=0.146 tol=4.25
2024-12-05 14:23:50,741 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.9 pTM=0.627 ipTM=0.152 tol=4.88
2024-12-05 14:23:56,971 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.4 pTM=0.624 ipTM=0.144 tol=1.45
2024-12-05 14:24:03,213 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.9 pTM=0.626 ipTM=0.144 tol=2.36
2024-12-05 14:24:09,458 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.6 pTM=0.625 ipTM=0.14 tol=3.33
2024-12-05 14:24:15,674 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.2 pTM=0.625 ipTM=0.15 tol=3.43
2024-12-05 14:24:21,922 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.9 pTM=0.627 ipTM=0.155 tol=3.25
2024-12-05 14:24:28,168 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.6 pTM=0.628 ipTM=0.15 tol=3.62
2024-12-05 14:24:34,420 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.6 pTM=0.626 ipTM=0.149 tol=2.65
2024-12-05 14:24:40,659 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.4 pTM=0.627 ipTM=0.159 tol=1.83
2024-12-05 14:24:46,895 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.8 pTM=0.63 ipTM=0.168 tol=2.04
2024-12-05 14:24:46,896 alphafold2_multimer_v3_model_1_seed_000 took 301.2s (30 recycles)
2024-12-05 14:24:53,336 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.6 pTM=0.637 ipTM=0.16
2024-12-05 14:24:59,593 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.1 pTM=0.625 ipTM=0.147 tol=9.92
2024-12-05 14:25:05,817 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.2 pTM=0.628 ipTM=0.142 tol=8.21
2024-12-05 14:25:12,046 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.2 pTM=0.631 ipTM=0.156 tol=9.62
2024-12-05 14:25:18,289 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.2 pTM=0.629 ipTM=0.142 tol=2.88
2024-12-05 14:25:24,538 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72 pTM=0.63 ipTM=0.145 tol=3.64
2024-12-05 14:25:30,781 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.2 pTM=0.63 ipTM=0.145 tol=2.31
2024-12-05 14:25:37,023 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.1 pTM=0.626 ipTM=0.124 tol=1.62
2024-12-05 14:25:43,252 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=72.5 pTM=0.625 ipTM=0.118 tol=3.53
2024-12-05 14:25:49,482 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=72.4 pTM=0.627 ipTM=0.123 tol=1.76
2024-12-05 14:25:55,699 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.5 pTM=0.625 ipTM=0.124 tol=9.12
2024-12-05 14:26:01,920 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.4 pTM=0.625 ipTM=0.126 tol=8.78
2024-12-05 14:26:08,140 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.6 pTM=0.626 ipTM=0.122 tol=1.44
2024-12-05 14:26:14,367 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.3 pTM=0.627 ipTM=0.131 tol=3.47
2024-12-05 14:26:20,598 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.3 pTM=0.631 ipTM=0.136 tol=1.99
2024-12-05 14:26:26,814 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.2 pTM=0.632 ipTM=0.143 tol=1.2
2024-12-05 14:26:33,042 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72.5 pTM=0.631 ipTM=0.133 tol=2.16
2024-12-05 14:26:39,268 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.8 pTM=0.634 ipTM=0.146 tol=1.88
2024-12-05 14:26:45,505 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.6 pTM=0.635 ipTM=0.15 tol=3.65
2024-12-05 14:26:51,724 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.3 pTM=0.632 ipTM=0.143 tol=1.71
2024-12-05 14:26:57,949 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.5 pTM=0.631 ipTM=0.135 tol=2.08
2024-12-05 14:27:04,172 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.6 pTM=0.632 ipTM=0.141 tol=1.6
2024-12-05 14:27:10,387 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.4 pTM=0.629 ipTM=0.125 tol=2
2024-12-05 14:27:16,615 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.9 pTM=0.626 ipTM=0.125 tol=4.61
2024-12-05 14:27:22,833 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=72.7 pTM=0.624 ipTM=0.126 tol=2.85
2024-12-05 14:27:29,051 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=72.4 pTM=0.626 ipTM=0.134 tol=4.41
2024-12-05 14:27:35,279 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.7 pTM=0.629 ipTM=0.131 tol=2.36
2024-12-05 14:27:41,508 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.4 pTM=0.633 ipTM=0.137 tol=2.26
2024-12-05 14:27:47,734 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.5 pTM=0.63 ipTM=0.132 tol=2.67
2024-12-05 14:27:53,953 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72.6 pTM=0.629 ipTM=0.142 tol=2.27
2024-12-05 14:28:00,184 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.1 pTM=0.629 ipTM=0.131 tol=4.71
2024-12-05 14:28:00,185 alphafold2_multimer_v3_model_2_seed_000 took 193.1s (30 recycles)
2024-12-05 14:28:06,634 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70 pTM=0.648 ipTM=0.221
2024-12-05 14:28:12,920 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.4 pTM=0.641 ipTM=0.204 tol=6.21
2024-12-05 14:28:19,201 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.6 pTM=0.644 ipTM=0.214 tol=5.05
2024-12-05 14:28:25,475 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.8 pTM=0.638 ipTM=0.191 tol=1.46
2024-12-05 14:28:31,740 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.5 pTM=0.639 ipTM=0.193 tol=2.4
2024-12-05 14:28:38,015 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.1 pTM=0.639 ipTM=0.189 tol=1.6
2024-12-05 14:28:44,293 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.2 pTM=0.641 ipTM=0.193 tol=1.66
2024-12-05 14:28:50,575 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.3 pTM=0.643 ipTM=0.198 tol=1.83
2024-12-05 14:28:56,840 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.6 pTM=0.647 ipTM=0.224 tol=1.65
2024-12-05 14:29:03,121 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.3 pTM=0.644 ipTM=0.202 tol=1.37
2024-12-05 14:29:09,393 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.2 pTM=0.651 ipTM=0.243 tol=10
2024-12-05 14:29:15,676 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.2 pTM=0.64 ipTM=0.191 tol=3.83
2024-12-05 14:29:21,957 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.1 pTM=0.645 ipTM=0.21 tol=2.82
2024-12-05 14:29:28,240 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.6 pTM=0.637 ipTM=0.181 tol=2.47
2024-12-05 14:29:34,516 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.8 pTM=0.641 ipTM=0.197 tol=2.18
2024-12-05 14:29:40,789 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72.4 pTM=0.637 ipTM=0.187 tol=2.37
2024-12-05 14:29:47,077 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.8 pTM=0.638 ipTM=0.184 tol=2.57
2024-12-05 14:29:53,356 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72.3 pTM=0.637 ipTM=0.179 tol=3.18
2024-12-05 14:29:59,648 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.3 pTM=0.646 ipTM=0.215 tol=3.56
2024-12-05 14:30:05,927 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.4 pTM=0.636 ipTM=0.18 tol=2.93
2024-12-05 14:30:12,212 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.8 pTM=0.64 ipTM=0.196 tol=3
2024-12-05 14:30:18,501 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.5 pTM=0.636 ipTM=0.178 tol=2.66
2024-12-05 14:30:24,779 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.6 pTM=0.637 ipTM=0.187 tol=2.44
2024-12-05 14:30:31,065 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.4 pTM=0.637 ipTM=0.183 tol=2.35
2024-12-05 14:30:37,345 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.8 pTM=0.642 ipTM=0.202 tol=2.26
2024-12-05 14:30:43,627 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.8 pTM=0.636 ipTM=0.177 tol=9.12
2024-12-05 14:30:49,903 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.8 pTM=0.642 ipTM=0.202 tol=2.93
2024-12-05 14:30:56,185 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.8 pTM=0.645 ipTM=0.211 tol=3.51
2024-12-05 14:31:02,448 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.8 pTM=0.651 ipTM=0.245 tol=2.51
2024-12-05 14:31:08,725 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.1 pTM=0.641 ipTM=0.195 tol=1.79
2024-12-05 14:31:15,005 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.2 pTM=0.642 ipTM=0.198 tol=1.73
2024-12-05 14:31:15,005 alphafold2_multimer_v3_model_3_seed_000 took 194.6s (30 recycles)
2024-12-05 14:31:21,484 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.4 pTM=0.653 ipTM=0.23
2024-12-05 14:31:27,752 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.9 pTM=0.641 ipTM=0.203 tol=6.96
2024-12-05 14:31:34,034 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.2 pTM=0.639 ipTM=0.194 tol=3.71
2024-12-05 14:31:40,291 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.9 pTM=0.636 ipTM=0.181 tol=2.42
2024-12-05 14:31:46,572 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.8 pTM=0.635 ipTM=0.172 tol=2.83
2024-12-05 14:31:52,829 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.8 pTM=0.641 ipTM=0.207 tol=6.18
2024-12-05 14:31:59,095 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71 pTM=0.637 ipTM=0.184 tol=3.72
2024-12-05 14:32:05,369 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.7 pTM=0.637 ipTM=0.178 tol=3.17
2024-12-05 14:32:11,630 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.1 pTM=0.64 ipTM=0.195 tol=3
2024-12-05 14:32:17,906 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.8 pTM=0.639 ipTM=0.19 tol=2.11
2024-12-05 14:32:24,163 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.1 pTM=0.642 ipTM=0.201 tol=1.67
2024-12-05 14:32:30,436 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.6 pTM=0.639 ipTM=0.188 tol=2.87
2024-12-05 14:32:36,714 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.5 pTM=0.643 ipTM=0.203 tol=3.41
2024-12-05 14:32:43,016 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.9 pTM=0.638 ipTM=0.18 tol=2.16
2024-12-05 14:32:49,304 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.2 pTM=0.644 ipTM=0.207 tol=2.07
2024-12-05 14:32:55,582 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.9 pTM=0.639 ipTM=0.186 tol=2.95
2024-12-05 14:33:01,849 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=71.7 pTM=0.638 ipTM=0.182 tol=3.11
2024-12-05 14:33:08,136 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.2 pTM=0.641 ipTM=0.191 tol=2.35
2024-12-05 14:33:14,426 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.2 pTM=0.646 ipTM=0.211 tol=2.4
2024-12-05 14:33:20,711 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.9 pTM=0.64 ipTM=0.189 tol=4.45
2024-12-05 14:33:26,982 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.9 pTM=0.651 ipTM=0.246 tol=5.44
2024-12-05 14:33:33,267 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.2 pTM=0.638 ipTM=0.185 tol=2.35
2024-12-05 14:33:39,540 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.6 pTM=0.642 ipTM=0.203 tol=2.74
2024-12-05 14:33:45,822 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.1 pTM=0.639 ipTM=0.187 tol=3.11
2024-12-05 14:33:52,095 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.8 pTM=0.644 ipTM=0.209 tol=2.43
2024-12-05 14:33:58,378 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.2 pTM=0.639 ipTM=0.185 tol=2.85
2024-12-05 14:34:04,658 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.6 pTM=0.642 ipTM=0.202 tol=2.26
2024-12-05 14:34:10,952 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71 pTM=0.641 ipTM=0.187 tol=3.18
2024-12-05 14:34:17,235 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.2 pTM=0.642 ipTM=0.199 tol=2.01
2024-12-05 14:34:23,529 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71 pTM=0.641 ipTM=0.195 tol=1.49
2024-12-05 14:34:29,802 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.2 pTM=0.644 ipTM=0.21 tol=2.71
2024-12-05 14:34:29,803 alphafold2_multimer_v3_model_4_seed_000 took 194.6s (30 recycles)
2024-12-05 14:34:36,284 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.1 pTM=0.63 ipTM=0.173
2024-12-05 14:34:42,570 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.2 pTM=0.646 ipTM=0.227 tol=9.35
2024-12-05 14:34:48,865 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.7 pTM=0.636 ipTM=0.188 tol=8.73
2024-12-05 14:34:55,157 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.9 pTM=0.634 ipTM=0.169 tol=4.39
2024-12-05 14:35:01,451 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71.4 pTM=0.641 ipTM=0.204 tol=3.14
2024-12-05 14:35:07,749 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=71.6 pTM=0.635 ipTM=0.171 tol=9.46
2024-12-05 14:35:14,049 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.7 pTM=0.641 ipTM=0.194 tol=7.42
2024-12-05 14:35:20,349 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71.4 pTM=0.638 ipTM=0.183 tol=4.19
2024-12-05 14:35:26,645 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.2 pTM=0.642 ipTM=0.2 tol=3.16
2024-12-05 14:35:32,946 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.2 pTM=0.643 ipTM=0.199 tol=4.02
2024-12-05 14:35:39,231 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.2 pTM=0.646 ipTM=0.229 tol=5.18
2024-12-05 14:35:45,528 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.4 pTM=0.641 ipTM=0.193 tol=4.56
2024-12-05 14:35:51,828 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.7 pTM=0.647 ipTM=0.222 tol=4.39
2024-12-05 14:35:58,126 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.5 pTM=0.64 ipTM=0.189 tol=4.51
2024-12-05 14:36:04,429 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.4 pTM=0.642 ipTM=0.197 tol=3.05
2024-12-05 14:36:10,729 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.2 pTM=0.642 ipTM=0.194 tol=2.11
2024-12-05 14:36:17,026 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.8 pTM=0.646 ipTM=0.213 tol=1.21
2024-12-05 14:36:23,321 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.6 pTM=0.641 ipTM=0.19 tol=4.25
2024-12-05 14:36:29,627 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.8 pTM=0.646 ipTM=0.215 tol=5.18
2024-12-05 14:36:35,917 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.7 pTM=0.636 ipTM=0.177 tol=4.31
2024-12-05 14:36:42,216 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.9 pTM=0.641 ipTM=0.194 tol=3.14
2024-12-05 14:36:48,511 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.6 pTM=0.641 ipTM=0.195 tol=3.73
2024-12-05 14:36:54,818 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.6 pTM=0.642 ipTM=0.198 tol=4.04
2024-12-05 14:37:01,105 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.8 pTM=0.643 ipTM=0.197 tol=4.6
2024-12-05 14:37:07,405 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.3 pTM=0.64 ipTM=0.189 tol=3.47
2024-12-05 14:37:13,700 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.7 pTM=0.647 ipTM=0.219 tol=3.74
2024-12-05 14:37:19,998 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.7 pTM=0.64 ipTM=0.189 tol=2.19
2024-12-05 14:37:26,286 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.6 pTM=0.643 ipTM=0.199 tol=3.01
2024-12-05 14:37:32,584 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.8 pTM=0.64 ipTM=0.185 tol=3.48
2024-12-05 14:37:38,880 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.5 pTM=0.641 ipTM=0.188 tol=1.54
2024-12-05 14:37:45,182 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.8 pTM=0.641 ipTM=0.188 tol=3.88
2024-12-05 14:37:45,182 alphafold2_multimer_v3_model_5_seed_000 took 195.2s (30 recycles)
2024-12-05 14:37:45,388 reranking models by 'multimer' metric
2024-12-05 14:37:48,316 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 14:38:32,471 Relaxation took 47.1s
2024-12-05 14:38:32,471 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.2 pTM=0.644 ipTM=0.21
2024-12-05 14:39:07,665 Relaxation took 35.2s
2024-12-05 14:39:07,666 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.2 pTM=0.642 ipTM=0.198
2024-12-05 14:39:36,363 Relaxation took 28.7s
2024-12-05 14:39:36,363 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.8 pTM=0.641 ipTM=0.188
2024-12-05 14:40:14,078 Relaxation took 37.7s
2024-12-05 14:40:14,078 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.8 pTM=0.63 ipTM=0.168
2024-12-05 14:40:50,057 Relaxation took 36.0s
2024-12-05 14:40:50,057 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.1 pTM=0.629 ipTM=0.131
2024-12-05 14:40:51,137 Done