2024-12-05 14:32:58,549 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 14:32:58,935 Running on GPU
2024-12-05 14:33:02,746 Found 6 citations for tools or databases
2024-12-05 14:33:02,746 Query 1/1: DTL_PFDN1 (length 852)
2024-12-05 14:33:03,030 Sleeping for 5s. Reason: PENDING
2024-12-05 14:33:08,298 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:33:17,556 Sleeping for 7s. Reason: RUNNING
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2024-12-05 14:33:36,334 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:33:46,604 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:33:51,865 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:34:01,128 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:34:10,384 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:34:15,647 Sleeping for 8s. Reason: RUNNING
2024-12-05 14:34:23,906 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:34:29,160 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:34:35,424 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:34:40,682 Sleeping for 8s. Reason: RUNNING
2024-12-05 14:34:48,947 Sleeping for 7s. Reason: RUNNING
2024-12-05 14:34:56,206 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:35:01,461 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:35:11,727 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:35:20,991 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:35:31,252 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:35:36,508 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:35:46,767 Sleeping for 7s. Reason: RUNNING
2024-12-05 14:35:54,033 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:36:04,777 Sleeping for 9s. Reason: PENDING
2024-12-05 14:36:14,033 Sleeping for 7s. Reason: RUNNING
2024-12-05 14:36:21,298 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:36:31,552 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:36:40,811 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:36:51,079 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:37:00,339 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:37:05,598 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:37:11,876 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:37:18,131 Sleeping for 8s. Reason: RUNNING
2024-12-05 14:37:29,288 Setting max_seq=508, max_extra_seq=2048
2024-12-05 14:40:31,601 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.2 pTM=0.506 ipTM=0.154
2024-12-05 14:40:50,070 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.8 pTM=0.503 ipTM=0.145 tol=9.11
2024-12-05 14:41:08,594 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57.5 pTM=0.502 ipTM=0.154 tol=9.02
2024-12-05 14:41:27,140 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57.7 pTM=0.503 ipTM=0.179 tol=6.07
2024-12-05 14:41:45,715 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.6 pTM=0.503 ipTM=0.2 tol=5
2024-12-05 14:42:04,321 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.6 pTM=0.505 ipTM=0.219 tol=4.47
2024-12-05 14:42:22,947 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.6 pTM=0.501 ipTM=0.21 tol=5.47
2024-12-05 14:42:41,586 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57.7 pTM=0.506 ipTM=0.237 tol=5.12
2024-12-05 14:43:00,243 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57.9 pTM=0.51 ipTM=0.255 tol=3.26
2024-12-05 14:43:18,899 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58.1 pTM=0.513 ipTM=0.268 tol=7.75
2024-12-05 14:43:37,573 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.2 pTM=0.516 ipTM=0.281 tol=6.65
2024-12-05 14:43:56,247 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=58.2 pTM=0.512 ipTM=0.267 tol=4.1
2024-12-05 14:44:14,929 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58.4 pTM=0.517 ipTM=0.302 tol=2.28
2024-12-05 14:44:33,607 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.4 pTM=0.516 ipTM=0.289 tol=2.89
2024-12-05 14:44:52,286 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.5 pTM=0.518 ipTM=0.294 tol=3.18
2024-12-05 14:45:10,971 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.5 pTM=0.517 ipTM=0.302 tol=3.74
2024-12-05 14:45:29,644 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.7 pTM=0.518 ipTM=0.304 tol=4.46
2024-12-05 14:45:48,315 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.8 pTM=0.518 ipTM=0.295 tol=4.9
2024-12-05 14:46:06,963 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58.5 pTM=0.518 ipTM=0.292 tol=4.94
2024-12-05 14:46:25,628 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.6 pTM=0.521 ipTM=0.313 tol=3.29
2024-12-05 14:46:44,303 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.7 pTM=0.52 ipTM=0.317 tol=3.24
2024-12-05 14:47:02,983 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.8 pTM=0.521 ipTM=0.325 tol=2.25
2024-12-05 14:47:21,661 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58.7 pTM=0.52 ipTM=0.317 tol=3.3
2024-12-05 14:47:40,335 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58.5 pTM=0.517 ipTM=0.298 tol=3.05
2024-12-05 14:47:59,015 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=58.8 pTM=0.519 ipTM=0.31 tol=5.42
2024-12-05 14:48:17,704 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=58.5 pTM=0.517 ipTM=0.304 tol=3.52
2024-12-05 14:48:36,434 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58.4 pTM=0.515 ipTM=0.294 tol=4.6
2024-12-05 14:48:55,167 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.3 pTM=0.516 ipTM=0.298 tol=7.34
2024-12-05 14:49:13,902 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.4 pTM=0.517 ipTM=0.304 tol=6.62
2024-12-05 14:49:32,633 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.5 pTM=0.514 ipTM=0.28 tol=4.62
2024-12-05 14:49:51,342 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.4 pTM=0.515 ipTM=0.283 tol=5.61
2024-12-05 14:49:51,343 alphafold2_multimer_v3_model_1_seed_000 took 734.9s (30 recycles)
2024-12-05 14:50:10,620 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.9 pTM=0.51 ipTM=0.145
2024-12-05 14:50:29,342 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58 pTM=0.508 ipTM=0.162 tol=10.6
2024-12-05 14:50:48,043 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.6 pTM=0.526 ipTM=0.316 tol=13.4
2024-12-05 14:51:06,759 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.8 pTM=0.52 ipTM=0.275 tol=7.3
2024-12-05 14:51:25,478 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.5 pTM=0.524 ipTM=0.319 tol=4.01
2024-12-05 14:51:44,192 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.7 pTM=0.522 ipTM=0.314 tol=4.46
2024-12-05 14:52:02,901 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.5 pTM=0.526 ipTM=0.341 tol=6.22
2024-12-05 14:52:21,624 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59 pTM=0.52 ipTM=0.305 tol=3.62
2024-12-05 14:52:40,338 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.6 pTM=0.523 ipTM=0.323 tol=3.55
2024-12-05 14:52:59,059 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59 pTM=0.521 ipTM=0.303 tol=2.73
2024-12-05 14:53:17,765 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.8 pTM=0.524 ipTM=0.323 tol=5.23
2024-12-05 14:53:36,471 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59 pTM=0.52 ipTM=0.292 tol=5.38
2024-12-05 14:53:55,166 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.7 pTM=0.521 ipTM=0.303 tol=4.18
2024-12-05 14:54:13,864 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.9 pTM=0.519 ipTM=0.29 tol=3.48
2024-12-05 14:54:32,559 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.8 pTM=0.522 ipTM=0.313 tol=2.95
2024-12-05 14:54:51,263 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59 pTM=0.517 ipTM=0.271 tol=3.05
2024-12-05 14:55:09,965 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.9 pTM=0.518 ipTM=0.279 tol=2.82
2024-12-05 14:55:28,671 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.2 pTM=0.518 ipTM=0.276 tol=2.31
2024-12-05 14:55:47,372 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.9 pTM=0.521 ipTM=0.291 tol=4.33
2024-12-05 14:56:06,110 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=59.2 pTM=0.52 ipTM=0.288 tol=4.54
2024-12-05 14:56:24,846 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.8 pTM=0.522 ipTM=0.305 tol=4.17
2024-12-05 14:56:43,582 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=59.1 pTM=0.52 ipTM=0.289 tol=4.68
2024-12-05 14:57:02,316 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.7 pTM=0.522 ipTM=0.305 tol=4.45
2024-12-05 14:57:21,074 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=59 pTM=0.517 ipTM=0.274 tol=4.67
2024-12-05 14:57:39,800 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.7 pTM=0.521 ipTM=0.305 tol=3.03
2024-12-05 14:57:58,516 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.7 pTM=0.518 ipTM=0.277 tol=2.65
2024-12-05 14:58:17,249 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.7 pTM=0.516 ipTM=0.274 tol=4.22
2024-12-05 14:58:35,960 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.5 pTM=0.518 ipTM=0.266 tol=7.71
2024-12-05 14:58:54,662 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.6 pTM=0.518 ipTM=0.271 tol=2.82
2024-12-05 14:59:13,375 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.7 pTM=0.516 ipTM=0.268 tol=4.58
2024-12-05 14:59:32,081 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.7 pTM=0.52 ipTM=0.276 tol=4.67
2024-12-05 14:59:32,082 alphafold2_multimer_v3_model_2_seed_000 took 580.2s (30 recycles)
2024-12-05 14:59:51,427 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.5 pTM=0.503 ipTM=0.163
2024-12-05 15:00:10,248 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.2 pTM=0.505 ipTM=0.137 tol=15.9
2024-12-05 15:00:29,073 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.1 pTM=0.503 ipTM=0.138 tol=9.66
2024-12-05 15:00:47,907 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=58.1 pTM=0.504 ipTM=0.144 tol=15.3
2024-12-05 15:01:06,726 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.1 pTM=0.507 ipTM=0.169 tol=10.7
2024-12-05 15:01:25,560 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.3 pTM=0.503 ipTM=0.144 tol=7.41
2024-12-05 15:01:44,384 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.2 pTM=0.508 ipTM=0.178 tol=6.9
2024-12-05 15:02:03,225 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.6 pTM=0.507 ipTM=0.186 tol=4.22
2024-12-05 15:02:22,037 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=58.3 pTM=0.509 ipTM=0.186 tol=3.35
2024-12-05 15:02:40,860 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58.6 pTM=0.506 ipTM=0.166 tol=1.9
2024-12-05 15:02:59,685 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.4 pTM=0.509 ipTM=0.187 tol=3.25
2024-12-05 15:03:18,555 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58.6 pTM=0.505 ipTM=0.166 tol=3.21
2024-12-05 15:03:37,382 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.3 pTM=0.51 ipTM=0.195 tol=2.65
2024-12-05 15:03:56,230 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.6 pTM=0.504 ipTM=0.157 tol=2.61
2024-12-05 15:04:15,074 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58.4 pTM=0.506 ipTM=0.167 tol=2.89
2024-12-05 15:04:33,935 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58.4 pTM=0.504 ipTM=0.148 tol=2.39
2024-12-05 15:04:52,761 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.4 pTM=0.507 ipTM=0.167 tol=2.12
2024-12-05 15:05:11,595 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.7 pTM=0.505 ipTM=0.158 tol=2.62
2024-12-05 15:05:30,422 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.5 pTM=0.508 ipTM=0.177 tol=3.73
2024-12-05 15:05:49,271 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58.5 pTM=0.507 ipTM=0.165 tol=3.53
2024-12-05 15:06:08,095 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.5 pTM=0.513 ipTM=0.209 tol=4.18
2024-12-05 15:06:26,915 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.7 pTM=0.508 ipTM=0.183 tol=4.26
2024-12-05 15:06:45,726 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.4 pTM=0.508 ipTM=0.183 tol=4.85
2024-12-05 15:07:04,570 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.7 pTM=0.504 ipTM=0.15 tol=4.81
2024-12-05 15:07:23,394 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58.5 pTM=0.51 ipTM=0.193 tol=5.34
2024-12-05 15:07:42,231 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.7 pTM=0.504 ipTM=0.149 tol=2.94
2024-12-05 15:08:01,049 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58.4 pTM=0.509 ipTM=0.183 tol=2.95
2024-12-05 15:08:19,867 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.5 pTM=0.505 ipTM=0.157 tol=7.57
2024-12-05 15:08:38,696 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=58.5 pTM=0.509 ipTM=0.179 tol=6.21
2024-12-05 15:08:57,518 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.8 pTM=0.507 ipTM=0.181 tol=6.32
2024-12-05 15:09:16,318 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58.7 pTM=0.511 ipTM=0.192 tol=1.76
2024-12-05 15:09:16,319 alphafold2_multimer_v3_model_3_seed_000 took 583.7s (30 recycles)
2024-12-05 15:09:35,596 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.1 pTM=0.538 ipTM=0.43
2024-12-05 15:09:54,345 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.5 pTM=0.515 ipTM=0.3 tol=7.76
2024-12-05 15:10:13,104 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.6 pTM=0.504 ipTM=0.229 tol=5.68
2024-12-05 15:10:31,872 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.1 pTM=0.511 ipTM=0.281 tol=6.03
2024-12-05 15:10:50,660 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.6 pTM=0.501 ipTM=0.21 tol=8.08
2024-12-05 15:11:09,459 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.6 pTM=0.503 ipTM=0.218 tol=3.94
2024-12-05 15:11:28,274 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.3 pTM=0.497 ipTM=0.171 tol=2.91
2024-12-05 15:11:47,104 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.4 pTM=0.498 ipTM=0.184 tol=2.62
2024-12-05 15:12:05,954 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.2 pTM=0.495 ipTM=0.161 tol=2.19
2024-12-05 15:12:24,813 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.3 pTM=0.497 ipTM=0.166 tol=2.59
2024-12-05 15:12:43,642 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.1 pTM=0.495 ipTM=0.159 tol=4.42
2024-12-05 15:13:02,475 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.8 pTM=0.495 ipTM=0.158 tol=3.21
2024-12-05 15:13:21,291 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.4 pTM=0.495 ipTM=0.161 tol=3.82
2024-12-05 15:13:40,087 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.9 pTM=0.496 ipTM=0.165 tol=5.96
2024-12-05 15:13:58,885 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.9 pTM=0.496 ipTM=0.167 tol=6.43
2024-12-05 15:14:17,681 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.9 pTM=0.496 ipTM=0.162 tol=2.22
2024-12-05 15:14:36,475 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.1 pTM=0.497 ipTM=0.171 tol=2.9
2024-12-05 15:14:55,253 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.6 pTM=0.5 ipTM=0.207 tol=7.25
2024-12-05 15:15:14,031 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.3 pTM=0.498 ipTM=0.174 tol=7.39
2024-12-05 15:15:32,813 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.2 pTM=0.498 ipTM=0.174 tol=5.57
2024-12-05 15:15:51,591 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.1 pTM=0.498 ipTM=0.173 tol=3.07
2024-12-05 15:16:10,372 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.2 pTM=0.498 ipTM=0.179 tol=2
2024-12-05 15:16:29,163 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57 pTM=0.497 ipTM=0.174 tol=5.69
2024-12-05 15:16:47,953 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.9 pTM=0.497 ipTM=0.173 tol=1.33
2024-12-05 15:17:06,733 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57 pTM=0.497 ipTM=0.169 tol=5.8
2024-12-05 15:17:25,514 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.1 pTM=0.497 ipTM=0.17 tol=1.71
2024-12-05 15:17:44,300 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.2 pTM=0.497 ipTM=0.176 tol=1.6
2024-12-05 15:18:03,073 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.9 pTM=0.498 ipTM=0.177 tol=2.09
2024-12-05 15:18:21,860 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57 pTM=0.497 ipTM=0.17 tol=1.7
2024-12-05 15:18:40,672 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.1 pTM=0.498 ipTM=0.174 tol=2.01
2024-12-05 15:18:59,492 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.9 pTM=0.498 ipTM=0.172 tol=5.79
2024-12-05 15:18:59,493 alphafold2_multimer_v3_model_4_seed_000 took 582.6s (30 recycles)
2024-12-05 15:19:18,853 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.3 pTM=0.501 ipTM=0.164
2024-12-05 15:19:37,687 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.8 pTM=0.5 ipTM=0.124 tol=19.4
2024-12-05 15:19:56,502 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.8 pTM=0.503 ipTM=0.13 tol=11.5
2024-12-05 15:20:15,325 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.2 pTM=0.504 ipTM=0.131 tol=6.43
2024-12-05 15:20:34,134 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.2 pTM=0.504 ipTM=0.126 tol=2.64
2024-12-05 15:20:52,943 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.1 pTM=0.504 ipTM=0.123 tol=2.43
2024-12-05 15:21:11,750 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.9 pTM=0.504 ipTM=0.123 tol=2.64
2024-12-05 15:21:30,543 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.7 pTM=0.501 ipTM=0.123 tol=5.84
2024-12-05 15:21:49,340 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.5 pTM=0.501 ipTM=0.132 tol=6.38
2024-12-05 15:22:08,143 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.5 pTM=0.501 ipTM=0.128 tol=5.81
2024-12-05 15:22:26,950 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59 pTM=0.5 ipTM=0.124 tol=9.66
2024-12-05 15:22:45,751 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59 pTM=0.5 ipTM=0.129 tol=7.11
2024-12-05 15:23:04,526 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.9 pTM=0.501 ipTM=0.125 tol=6.5
2024-12-05 15:23:23,304 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.8 pTM=0.502 ipTM=0.124 tol=3.06
2024-12-05 15:23:42,076 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.6 pTM=0.503 ipTM=0.122 tol=5.16
2024-12-05 15:24:00,852 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.5 pTM=0.5 ipTM=0.122 tol=4.93
2024-12-05 15:24:19,637 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.6 pTM=0.5 ipTM=0.122 tol=4.41
2024-12-05 15:24:38,427 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.4 pTM=0.499 ipTM=0.124 tol=7.19
2024-12-05 15:24:57,218 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.5 pTM=0.5 ipTM=0.126 tol=5.15
2024-12-05 15:25:16,018 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.3 pTM=0.499 ipTM=0.127 tol=7.07
2024-12-05 15:25:34,811 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.2 pTM=0.499 ipTM=0.129 tol=4.18
2024-12-05 15:25:53,603 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.2 pTM=0.498 ipTM=0.137 tol=7.1
2024-12-05 15:26:12,415 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.4 pTM=0.498 ipTM=0.121 tol=7.91
2024-12-05 15:26:31,237 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.7 pTM=0.498 ipTM=0.127 tol=9.55
2024-12-05 15:26:50,055 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59 pTM=0.5 ipTM=0.124 tol=4.1
2024-12-05 15:27:08,858 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.8 pTM=0.5 ipTM=0.124 tol=5.12
2024-12-05 15:27:27,664 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.6 pTM=0.499 ipTM=0.125 tol=4.02
2024-12-05 15:27:46,478 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.2 pTM=0.499 ipTM=0.133 tol=6.59
2024-12-05 15:28:05,296 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.4 pTM=0.5 ipTM=0.13 tol=6.25
2024-12-05 15:28:24,098 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.4 pTM=0.499 ipTM=0.132 tol=7.41
2024-12-05 15:28:42,899 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.6 pTM=0.5 ipTM=0.125 tol=7.45
2024-12-05 15:28:42,900 alphafold2_multimer_v3_model_5_seed_000 took 582.8s (30 recycles)
2024-12-05 15:28:43,482 reranking models by 'multimer' metric
2024-12-05 15:28:46,919 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 15:29:43,923 Relaxation took 60.4s
2024-12-05 15:29:43,923 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.4 pTM=0.515 ipTM=0.283
2024-12-05 15:30:40,450 Relaxation took 56.5s
2024-12-05 15:30:40,451 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.7 pTM=0.52 ipTM=0.276
2024-12-05 15:31:34,557 Relaxation took 54.1s
2024-12-05 15:31:34,557 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58.7 pTM=0.511 ipTM=0.192
2024-12-05 15:32:42,269 Relaxation took 67.7s
2024-12-05 15:32:42,269 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.9 pTM=0.498 ipTM=0.172
2024-12-05 15:33:47,994 Relaxation took 65.7s
2024-12-05 15:33:47,994 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.6 pTM=0.5 ipTM=0.125
2024-12-05 15:33:49,701 Done