2024-12-05 14:41:24,691 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 14:41:25,012 Running on GPU
2024-12-05 14:41:26,632 Found 6 citations for tools or databases
2024-12-05 14:41:26,632 Query 1/1: DTX3L_PARP9 (length 1594)
2024-12-05 14:41:26,890 Sleeping for 10s. Reason: PENDING
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2024-12-05 14:42:08,191 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:42:18,462 Sleeping for 7s. Reason: RUNNING
2024-12-05 14:42:25,721 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:42:31,971 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:42:38,224 Sleeping for 7s. Reason: RUNNING
2024-12-05 14:42:45,482 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:42:54,739 Sleeping for 10s. Reason: RUNNING
2024-12-05 14:43:05,006 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:43:14,262 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:43:19,678 Sleeping for 7s. Reason: RUNNING
2024-12-05 14:43:26,940 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:43:33,201 Sleeping for 7s. Reason: RUNNING
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2024-12-05 14:44:15,793 Sleeping for 8s. Reason: PENDING
2024-12-05 14:44:24,051 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:44:33,313 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:44:38,569 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:44:44,824 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:44:50,077 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:44:56,353 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:45:05,618 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:45:14,877 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:45:20,140 Sleeping for 5s. Reason: RUNNING
2024-12-05 14:45:25,395 Sleeping for 6s. Reason: RUNNING
2024-12-05 14:45:31,655 Sleeping for 7s. Reason: RUNNING
2024-12-05 14:45:38,913 Sleeping for 9s. Reason: RUNNING
2024-12-05 14:45:53,268 Setting max_seq=508, max_extra_seq=2048
2024-12-05 14:49:45,301 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.9 pTM=0.441 ipTM=0.518
2024-12-05 14:51:02,376 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.6 pTM=0.436 ipTM=0.511 tol=7.62
2024-12-05 14:52:19,453 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.5 pTM=0.436 ipTM=0.514 tol=14.1
2024-12-05 14:53:36,523 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.9 pTM=0.434 ipTM=0.505 tol=5
2024-12-05 14:54:53,596 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.8 pTM=0.431 ipTM=0.501 tol=2.9
2024-12-05 14:56:10,670 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.2 pTM=0.433 ipTM=0.504 tol=1.84
2024-12-05 14:57:27,738 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.4 pTM=0.432 ipTM=0.504 tol=2.49
2024-12-05 14:58:44,825 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.2 pTM=0.432 ipTM=0.503 tol=2.6
2024-12-05 15:00:01,899 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.1 pTM=0.431 ipTM=0.501 tol=2.2
2024-12-05 15:01:18,971 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.3 pTM=0.432 ipTM=0.501 tol=1.44
2024-12-05 15:02:36,084 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.2 pTM=0.431 ipTM=0.501 tol=2.15
2024-12-05 15:03:53,203 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.1 pTM=0.431 ipTM=0.501 tol=2.36
2024-12-05 15:05:10,281 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.8 pTM=0.431 ipTM=0.5 tol=3.07
2024-12-05 15:06:27,376 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.8 pTM=0.432 ipTM=0.501 tol=3.13
2024-12-05 15:07:44,460 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.6 pTM=0.431 ipTM=0.501 tol=2.89
2024-12-05 15:09:01,579 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.6 pTM=0.433 ipTM=0.502 tol=3.55
2024-12-05 15:10:18,683 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.5 pTM=0.433 ipTM=0.504 tol=4.32
2024-12-05 15:11:35,796 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.4 pTM=0.432 ipTM=0.506 tol=4.79
2024-12-05 15:12:52,918 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.8 pTM=0.433 ipTM=0.508 tol=4.24
2024-12-05 15:14:10,044 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.8 pTM=0.434 ipTM=0.509 tol=3.65
2024-12-05 15:15:27,146 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68 pTM=0.435 ipTM=0.51 tol=3.26
2024-12-05 15:16:44,247 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.2 pTM=0.437 ipTM=0.512 tol=2.96
2024-12-05 15:18:01,366 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.3 pTM=0.436 ipTM=0.511 tol=2.24
2024-12-05 15:19:18,457 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.1 pTM=0.435 ipTM=0.509 tol=2.35
2024-12-05 15:20:35,535 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.4 pTM=0.436 ipTM=0.512 tol=1.83
2024-12-05 15:21:52,654 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.3 pTM=0.435 ipTM=0.509 tol=1.53
2024-12-05 15:23:09,751 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.4 pTM=0.436 ipTM=0.51 tol=1.06
2024-12-05 15:24:26,839 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.4 pTM=0.435 ipTM=0.509 tol=1.15
2024-12-05 15:25:43,918 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.2 pTM=0.436 ipTM=0.509 tol=1.34
2024-12-05 15:27:00,995 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.4 pTM=0.435 ipTM=0.509 tol=2.34
2024-12-05 15:28:18,060 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.3 pTM=0.436 ipTM=0.509 tol=2.49
2024-12-05 15:28:18,062 alphafold2_multimer_v3_model_1_seed_000 took 2539.6s (30 recycles)
2024-12-05 15:29:36,752 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.9 pTM=0.452 ipTM=0.525
2024-12-05 15:30:53,862 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.7 pTM=0.447 ipTM=0.515 tol=11
2024-12-05 15:32:10,970 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.8 pTM=0.445 ipTM=0.515 tol=3.28
2024-12-05 15:33:28,075 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.2 pTM=0.445 ipTM=0.517 tol=1.59
2024-12-05 15:34:45,202 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70.4 pTM=0.444 ipTM=0.515 tol=1.72
2024-12-05 15:36:02,329 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=70.6 pTM=0.447 ipTM=0.519 tol=1.47
2024-12-05 15:37:19,447 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.8 pTM=0.448 ipTM=0.521 tol=1.34
2024-12-05 15:38:36,580 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=70.8 pTM=0.446 ipTM=0.518 tol=1.85
2024-12-05 15:39:53,692 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70.5 pTM=0.446 ipTM=0.517 tol=5.57
2024-12-05 15:41:10,798 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.6 pTM=0.447 ipTM=0.518 tol=2.3
2024-12-05 15:42:27,923 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.7 pTM=0.445 ipTM=0.516 tol=1.18
2024-12-05 15:43:45,031 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.7 pTM=0.446 ipTM=0.516 tol=1.02
2024-12-05 15:45:02,133 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.5 pTM=0.444 ipTM=0.517 tol=1.05
2024-12-05 15:46:19,268 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.6 pTM=0.444 ipTM=0.517 tol=1.46
2024-12-05 15:47:36,396 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.5 pTM=0.444 ipTM=0.516 tol=1.77
2024-12-05 15:48:53,497 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.4 pTM=0.444 ipTM=0.516 tol=1.72
2024-12-05 15:50:10,635 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.6 pTM=0.443 ipTM=0.515 tol=1.8
2024-12-05 15:51:27,759 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.6 pTM=0.444 ipTM=0.515 tol=1.42
2024-12-05 15:52:44,879 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.5 pTM=0.443 ipTM=0.515 tol=0.927
2024-12-05 15:54:02,031 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70.5 pTM=0.444 ipTM=0.515 tol=1.59
2024-12-05 15:55:19,171 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.4 pTM=0.443 ipTM=0.515 tol=1.14
2024-12-05 15:56:36,301 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=70.8 pTM=0.445 ipTM=0.517 tol=1.5
2024-12-05 15:57:53,422 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.6 pTM=0.443 ipTM=0.515 tol=1.41
2024-12-05 15:59:10,516 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=70.5 pTM=0.442 ipTM=0.514 tol=0.736
2024-12-05 16:00:27,646 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=70.7 pTM=0.444 ipTM=0.517 tol=1.13
2024-12-05 16:01:44,796 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=70.4 pTM=0.443 ipTM=0.513 tol=1.66
2024-12-05 16:03:01,946 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.5 pTM=0.442 ipTM=0.513 tol=1.41
2024-12-05 16:04:19,082 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=70.8 pTM=0.442 ipTM=0.515 tol=1.14
2024-12-05 16:05:36,219 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70.5 pTM=0.442 ipTM=0.514 tol=1.13
2024-12-05 16:06:53,353 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=70.6 pTM=0.442 ipTM=0.513 tol=1.28
2024-12-05 16:08:10,510 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=70.7 pTM=0.442 ipTM=0.514 tol=1.52
2024-12-05 16:08:10,511 alphafold2_multimer_v3_model_2_seed_000 took 2390.9s (30 recycles)
2024-12-05 16:09:29,407 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.2 pTM=0.442 ipTM=0.515
2024-12-05 16:10:46,699 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.6 pTM=0.442 ipTM=0.516 tol=13
2024-12-05 16:12:03,922 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.6 pTM=0.442 ipTM=0.521 tol=5.66
2024-12-05 16:13:21,081 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.9 pTM=0.446 ipTM=0.525 tol=3.35
2024-12-05 16:14:38,230 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=69.8 pTM=0.449 ipTM=0.529 tol=2.42
2024-12-05 16:15:55,364 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.9 pTM=0.456 ipTM=0.54 tol=2.15
2024-12-05 16:17:12,505 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.1 pTM=0.461 ipTM=0.545 tol=3.03
2024-12-05 16:18:29,642 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.1 pTM=0.464 ipTM=0.549 tol=1.42
2024-12-05 16:19:46,775 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70 pTM=0.463 ipTM=0.547 tol=1.24
2024-12-05 16:21:03,891 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70 pTM=0.464 ipTM=0.549 tol=1.04
2024-12-05 16:22:21,023 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.2 pTM=0.465 ipTM=0.55 tol=2.11
2024-12-05 16:23:38,135 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.2 pTM=0.465 ipTM=0.55 tol=1.8
2024-12-05 16:24:55,255 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.1 pTM=0.463 ipTM=0.546 tol=0.883
2024-12-05 16:26:12,377 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.1 pTM=0.462 ipTM=0.545 tol=0.766
2024-12-05 16:27:29,461 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.1 pTM=0.462 ipTM=0.542 tol=0.798
2024-12-05 16:28:46,572 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.1 pTM=0.465 ipTM=0.548 tol=0.849
2024-12-05 16:30:03,686 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.2 pTM=0.466 ipTM=0.55 tol=1.04
2024-12-05 16:31:20,815 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.1 pTM=0.463 ipTM=0.546 tol=1.03
2024-12-05 16:32:37,936 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.1 pTM=0.463 ipTM=0.546 tol=0.631
2024-12-05 16:33:55,058 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.1 pTM=0.464 ipTM=0.547 tol=0.749
2024-12-05 16:35:12,155 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=69.9 pTM=0.464 ipTM=0.547 tol=0.669
2024-12-05 16:36:29,260 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.2 pTM=0.465 ipTM=0.547 tol=0.77
2024-12-05 16:37:46,365 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70 pTM=0.466 ipTM=0.548 tol=0.812
2024-12-05 16:39:03,453 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.7 pTM=0.464 ipTM=0.547 tol=2.62
2024-12-05 16:40:20,573 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.1 pTM=0.466 ipTM=0.547 tol=2.27
2024-12-05 16:41:37,668 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70 pTM=0.465 ipTM=0.547 tol=0.635
2024-12-05 16:42:54,774 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.8 pTM=0.467 ipTM=0.549 tol=12.7
2024-12-05 16:44:11,997 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.8 pTM=0.436 ipTM=0.504 tol=10.6
2024-12-05 16:45:29,253 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.3 pTM=0.437 ipTM=0.505 tol=6.64
2024-12-05 16:46:46,478 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.5 pTM=0.441 ipTM=0.507 tol=4.31
2024-12-05 16:48:03,700 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.5 pTM=0.442 ipTM=0.509 tol=6.49
2024-12-05 16:48:03,701 alphafold2_multimer_v3_model_3_seed_000 took 2391.7s (30 recycles)
2024-12-05 16:49:22,603 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.1 pTM=0.449 ipTM=0.527
2024-12-05 16:50:39,898 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68 pTM=0.45 ipTM=0.519 tol=13.9
2024-12-05 16:51:57,171 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.5 pTM=0.446 ipTM=0.519 tol=4.54
2024-12-05 16:53:14,399 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.8 pTM=0.454 ipTM=0.533 tol=2.79
2024-12-05 16:54:31,603 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.9 pTM=0.454 ipTM=0.536 tol=4.78
2024-12-05 16:55:48,827 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.9 pTM=0.457 ipTM=0.538 tol=4.37
2024-12-05 16:57:06,058 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.9 pTM=0.457 ipTM=0.543 tol=4.19
2024-12-05 16:58:23,300 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.1 pTM=0.459 ipTM=0.544 tol=4.44
2024-12-05 16:59:40,545 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68 pTM=0.456 ipTM=0.544 tol=2.85
2024-12-05 17:00:57,820 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.1 pTM=0.456 ipTM=0.541 tol=3
2024-12-05 17:02:15,067 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.2 pTM=0.458 ipTM=0.544 tol=3.84
2024-12-05 17:03:32,352 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.2 pTM=0.456 ipTM=0.541 tol=2.86
2024-12-05 17:04:49,619 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.4 pTM=0.457 ipTM=0.543 tol=3.11
2024-12-05 17:06:06,887 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.2 pTM=0.454 ipTM=0.536 tol=4.02
2024-12-05 17:07:24,141 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.1 pTM=0.452 ipTM=0.536 tol=2.31
2024-12-05 17:08:41,405 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.1 pTM=0.454 ipTM=0.537 tol=3.03
2024-12-05 17:09:58,677 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.4 pTM=0.455 ipTM=0.538 tol=2.15
2024-12-05 17:11:15,990 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.1 pTM=0.451 ipTM=0.533 tol=2.86
2024-12-05 17:12:33,259 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.2 pTM=0.451 ipTM=0.534 tol=3.26
2024-12-05 17:13:50,544 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.2 pTM=0.453 ipTM=0.535 tol=3.13
2024-12-05 17:15:07,830 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.2 pTM=0.453 ipTM=0.536 tol=3.19
2024-12-05 17:16:25,113 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.2 pTM=0.451 ipTM=0.532 tol=2.19
2024-12-05 17:17:42,407 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68 pTM=0.453 ipTM=0.537 tol=3.32
2024-12-05 17:18:59,698 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.1 pTM=0.452 ipTM=0.533 tol=2.28
2024-12-05 17:20:16,956 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.1 pTM=0.453 ipTM=0.536 tol=1.89
2024-12-05 17:21:34,248 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68 pTM=0.454 ipTM=0.534 tol=2.32
2024-12-05 17:22:51,523 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.1 pTM=0.454 ipTM=0.536 tol=3.36
2024-12-05 17:24:08,764 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.9 pTM=0.453 ipTM=0.534 tol=1.69
2024-12-05 17:25:25,979 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.9 pTM=0.455 ipTM=0.537 tol=1.98
2024-12-05 17:26:43,221 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68 pTM=0.457 ipTM=0.536 tol=2.9
2024-12-05 17:28:00,489 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.3 pTM=0.454 ipTM=0.535 tol=3.41
2024-12-05 17:28:00,490 alphafold2_multimer_v3_model_4_seed_000 took 2395.3s (30 recycles)
2024-12-05 17:29:19,264 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.1 pTM=0.438 ipTM=0.514
2024-12-05 17:30:36,489 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.7 pTM=0.441 ipTM=0.516 tol=9.3
2024-12-05 17:31:53,659 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.6 pTM=0.44 ipTM=0.519 tol=6.11
2024-12-05 17:33:10,792 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.9 pTM=0.444 ipTM=0.525 tol=6.48
2024-12-05 17:34:27,889 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.9 pTM=0.448 ipTM=0.529 tol=5.14
2024-12-05 17:35:44,994 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.2 pTM=0.458 ipTM=0.547 tol=3.47
2024-12-05 17:37:02,090 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.4 pTM=0.463 ipTM=0.556 tol=2.56
2024-12-05 17:38:19,161 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.4 pTM=0.467 ipTM=0.561 tol=2.17
2024-12-05 17:39:36,267 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.1 pTM=0.459 ipTM=0.551 tol=3.09
2024-12-05 17:40:53,320 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.4 pTM=0.466 ipTM=0.559 tol=2.2
2024-12-05 17:42:10,385 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.4 pTM=0.466 ipTM=0.561 tol=1.81
2024-12-05 17:43:27,435 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.6 pTM=0.472 ipTM=0.57 tol=1.44
2024-12-05 17:44:44,493 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.6 pTM=0.468 ipTM=0.564 tol=2.2
2024-12-05 17:46:01,534 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.7 pTM=0.473 ipTM=0.572 tol=2.11
2024-12-05 17:47:18,570 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.6 pTM=0.469 ipTM=0.565 tol=2.72
2024-12-05 17:48:35,630 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.6 pTM=0.47 ipTM=0.567 tol=1.64
2024-12-05 17:49:52,706 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.6 pTM=0.468 ipTM=0.562 tol=1.85
2024-12-05 17:51:09,747 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.6 pTM=0.472 ipTM=0.571 tol=2.71
2024-12-05 17:52:26,809 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.7 pTM=0.465 ipTM=0.56 tol=2.18
2024-12-05 17:53:43,854 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.8 pTM=0.47 ipTM=0.565 tol=1.77
2024-12-05 17:55:00,938 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.6 pTM=0.467 ipTM=0.562 tol=1.48
2024-12-05 17:56:18,004 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.7 pTM=0.469 ipTM=0.564 tol=1.44
2024-12-05 17:57:35,087 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.7 pTM=0.468 ipTM=0.565 tol=2.47
2024-12-05 17:58:52,159 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.6 pTM=0.466 ipTM=0.56 tol=1.93
2024-12-05 18:00:09,220 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.8 pTM=0.467 ipTM=0.561 tol=1.52
2024-12-05 18:01:26,271 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.8 pTM=0.465 ipTM=0.557 tol=1.25
2024-12-05 18:02:43,317 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.8 pTM=0.467 ipTM=0.562 tol=1.74
2024-12-05 18:04:00,354 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.8 pTM=0.47 ipTM=0.568 tol=2.18
2024-12-05 18:05:17,377 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.6 pTM=0.463 ipTM=0.554 tol=2.6
2024-12-05 18:06:34,382 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.8 pTM=0.471 ipTM=0.566 tol=2.48
2024-12-05 18:07:51,420 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.9 pTM=0.463 ipTM=0.555 tol=1.87
2024-12-05 18:07:51,421 alphafold2_multimer_v3_model_5_seed_000 took 2389.4s (30 recycles)
2024-12-05 18:07:52,909 reranking models by 'multimer' metric
2024-12-05 18:07:54,379 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 18:10:52,621 Relaxation took 179.7s
2024-12-05 18:10:52,622 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.9 pTM=0.463 ipTM=0.555
2024-12-05 18:14:03,735 Relaxation took 191.1s
2024-12-05 18:14:03,735 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.3 pTM=0.454 ipTM=0.535
2024-12-05 18:19:26,567 Relaxation took 322.8s
2024-12-05 18:19:26,568 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.7 pTM=0.442 ipTM=0.514
2024-12-05 18:22:46,690 Relaxation took 200.1s
2024-12-05 18:22:46,690 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.5 pTM=0.442 ipTM=0.509
2024-12-05 18:26:45,952 Relaxation took 239.3s
2024-12-05 18:26:45,952 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.3 pTM=0.436 ipTM=0.509
2024-12-05 18:26:49,792 Done