2024-12-05 14:44:59,984 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 14:45:00,305 Running on GPU
2024-12-05 14:45:04,435 Found 6 citations for tools or databases
2024-12-05 14:45:04,436 Query 1/1: DTX4_HPCAL1 (length 812)
2024-12-05 14:45:06,388 Sleeping for 9s. Reason: PENDING
2024-12-05 14:45:15,659 Sleeping for 8s. Reason: PENDING
2024-12-05 14:45:23,914 Sleeping for 9s. Reason: PENDING
2024-12-05 14:45:33,172 Sleeping for 9s. Reason: PENDING
2024-12-05 14:45:42,463 Sleeping for 5s. Reason: PENDING
2024-12-05 14:45:47,719 Sleeping for 9s. Reason: PENDING
2024-12-05 14:45:56,978 Sleeping for 10s. Reason: PENDING
2024-12-05 14:46:07,237 Sleeping for 10s. Reason: PENDING
2024-12-05 14:46:17,500 Sleeping for 9s. Reason: PENDING
2024-12-05 14:46:26,758 Sleeping for 5s. Reason: PENDING
2024-12-05 14:46:32,015 Sleeping for 8s. Reason: PENDING
2024-12-05 14:46:40,279 Sleeping for 6s. Reason: PENDING
2024-12-05 14:46:46,535 Sleeping for 10s. Reason: PENDING
2024-12-05 14:46:56,800 Sleeping for 8s. Reason: PENDING
2024-12-05 14:47:05,054 Sleeping for 9s. Reason: PENDING
2024-12-05 14:47:14,312 Sleeping for 8s. Reason: PENDING
2024-12-05 14:47:22,573 Sleeping for 10s. Reason: PENDING
2024-12-05 14:47:38,610 Timeout while fetching status from MSA server. Retrying...
2024-12-05 14:47:44,637 Timeout while fetching status from MSA server. Retrying...
2024-12-05 14:47:50,664 Timeout while fetching status from MSA server. Retrying...
2024-12-05 14:47:56,692 Timeout while fetching status from MSA server. Retrying...
2024-12-05 14:48:02,719 Timeout while fetching status from MSA server. Retrying...
2024-12-05 14:48:03,971 Sleeping for 9s. Reason: PENDING
2024-12-05 14:48:13,242 Sleeping for 7s. Reason: PENDING
2024-12-05 14:48:20,505 Sleeping for 5s. Reason: PENDING
2024-12-05 14:48:25,764 Sleeping for 6s. Reason: PENDING
2024-12-05 14:48:32,026 Sleeping for 5s. Reason: PENDING
2024-12-05 14:48:37,279 Sleeping for 10s. Reason: PENDING
2024-12-05 14:48:47,553 Sleeping for 5s. Reason: PENDING
2024-12-05 14:48:52,812 Sleeping for 7s. Reason: PENDING
2024-12-05 14:49:00,071 Sleeping for 5s. Reason: PENDING
2024-12-05 14:49:05,584 Sleeping for 5s. Reason: PENDING
2024-12-05 14:49:10,833 Sleeping for 8s. Reason: PENDING
2024-12-05 14:49:19,095 Sleeping for 10s. Reason: PENDING
2024-12-05 14:49:29,357 Sleeping for 9s. Reason: PENDING
2024-12-05 14:49:38,620 Sleeping for 9s. Reason: PENDING
2024-12-05 14:49:47,886 Sleeping for 7s. Reason: PENDING
2024-12-05 14:49:55,146 Sleeping for 6s. Reason: PENDING
2024-12-05 14:50:01,404 Sleeping for 8s. Reason: PENDING
2024-12-05 14:50:09,656 Sleeping for 8s. Reason: PENDING
2024-12-05 14:50:17,920 Sleeping for 10s. Reason: PENDING
2024-12-05 14:50:28,178 Sleeping for 8s. Reason: PENDING
2024-12-05 14:50:36,437 Sleeping for 8s. Reason: PENDING
2024-12-05 14:50:44,690 Sleeping for 9s. Reason: PENDING
2024-12-05 14:50:53,948 Sleeping for 10s. Reason: PENDING
2024-12-05 14:51:04,209 Sleeping for 7s. Reason: PENDING
2024-12-05 14:51:11,466 Sleeping for 8s. Reason: PENDING
2024-12-05 14:51:19,722 Sleeping for 7s. Reason: PENDING
2024-12-05 14:51:26,976 Sleeping for 9s. Reason: PENDING
2024-12-05 14:51:36,235 Sleeping for 5s. Reason: PENDING
2024-12-05 14:51:41,495 Sleeping for 6s. Reason: PENDING
2024-12-05 14:51:47,757 Sleeping for 6s. Reason: PENDING
2024-12-05 14:51:54,017 Sleeping for 7s. Reason: PENDING
2024-12-05 14:52:01,273 Sleeping for 7s. Reason: PENDING
2024-12-05 14:52:08,524 Sleeping for 5s. Reason: PENDING
2024-12-05 14:52:13,779 Sleeping for 6s. Reason: PENDING
2024-12-05 14:52:20,033 Sleeping for 7s. Reason: PENDING
2024-12-05 14:52:27,286 Sleeping for 10s. Reason: PENDING
2024-12-05 14:52:37,555 Sleeping for 6s. Reason: PENDING
2024-12-05 14:52:43,813 Sleeping for 5s. Reason: PENDING
2024-12-05 14:52:49,071 Sleeping for 10s. Reason: PENDING
2024-12-05 14:52:59,334 Sleeping for 5s. Reason: PENDING
2024-12-05 14:53:04,597 Sleeping for 6s. Reason: PENDING
2024-12-05 14:53:10,854 Sleeping for 8s. Reason: PENDING
2024-12-05 14:53:19,112 Sleeping for 6s. Reason: PENDING
2024-12-05 14:53:25,369 Sleeping for 10s. Reason: PENDING
2024-12-05 14:53:35,639 Sleeping for 5s. Reason: PENDING
2024-12-05 14:53:40,898 Sleeping for 7s. Reason: PENDING
2024-12-05 14:53:48,164 Sleeping for 5s. Reason: PENDING
2024-12-05 14:53:53,416 Sleeping for 6s. Reason: PENDING
2024-12-05 14:53:59,670 Sleeping for 9s. Reason: PENDING
2024-12-05 14:54:08,928 Sleeping for 9s. Reason: PENDING
2024-12-05 14:54:18,186 Sleeping for 7s. Reason: PENDING
2024-12-05 14:54:25,445 Sleeping for 8s. Reason: PENDING
2024-12-05 14:54:33,699 Sleeping for 5s. Reason: PENDING
2024-12-05 14:54:38,956 Sleeping for 5s. Reason: PENDING
2024-12-05 14:54:44,212 Sleeping for 5s. Reason: PENDING
2024-12-05 14:54:49,483 Sleeping for 6s. Reason: PENDING
2024-12-05 14:54:55,743 Sleeping for 8s. Reason: PENDING
2024-12-05 14:55:04,004 Sleeping for 5s. Reason: PENDING
2024-12-05 14:55:09,257 Sleeping for 5s. Reason: PENDING
2024-12-05 14:55:14,514 Sleeping for 10s. Reason: PENDING
2024-12-05 14:55:24,772 Sleeping for 9s. Reason: PENDING
2024-12-05 14:55:34,035 Sleeping for 5s. Reason: PENDING
2024-12-05 14:55:39,296 Sleeping for 5s. Reason: PENDING
2024-12-05 14:55:44,559 Sleeping for 9s. Reason: PENDING
2024-12-05 14:55:53,823 Sleeping for 5s. Reason: PENDING
2024-12-05 14:55:59,082 Sleeping for 10s. Reason: PENDING
2024-12-05 14:56:09,335 Sleeping for 7s. Reason: PENDING
2024-12-05 14:56:16,590 Sleeping for 8s. Reason: PENDING
2024-12-05 14:56:24,844 Sleeping for 9s. Reason: PENDING
2024-12-05 14:56:34,111 Sleeping for 6s. Reason: PENDING
2024-12-05 14:56:40,369 Sleeping for 6s. Reason: PENDING
2024-12-05 14:56:46,626 Sleeping for 5s. Reason: PENDING
2024-12-05 14:56:51,886 Sleeping for 10s. Reason: PENDING
2024-12-05 14:57:02,148 Sleeping for 5s. Reason: PENDING
2024-12-05 14:57:07,415 Sleeping for 6s. Reason: PENDING
2024-12-05 14:57:13,695 Sleeping for 7s. Reason: PENDING
2024-12-05 14:57:20,966 Sleeping for 5s. Reason: PENDING
2024-12-05 14:57:26,232 Sleeping for 6s. Reason: PENDING
2024-12-05 14:57:32,483 Sleeping for 9s. Reason: PENDING
2024-12-05 14:57:41,741 Sleeping for 10s. Reason: PENDING
2024-12-05 14:57:52,004 Sleeping for 8s. Reason: PENDING
2024-12-05 14:58:00,261 Sleeping for 10s. Reason: PENDING
2024-12-05 14:58:10,525 Sleeping for 5s. Reason: PENDING
2024-12-05 14:58:15,781 Sleeping for 8s. Reason: PENDING
2024-12-05 14:58:24,035 Sleeping for 7s. Reason: PENDING
2024-12-05 14:58:31,293 Sleeping for 8s. Reason: PENDING
2024-12-05 14:58:39,556 Sleeping for 7s. Reason: PENDING
2024-12-05 14:58:46,815 Sleeping for 9s. Reason: PENDING
2024-12-05 14:58:56,088 Sleeping for 6s. Reason: PENDING
2024-12-05 14:59:02,349 Sleeping for 7s. Reason: PENDING
2024-12-05 14:59:09,611 Sleeping for 7s. Reason: PENDING
2024-12-05 14:59:17,040 Sleeping for 10s. Reason: PENDING
2024-12-05 14:59:27,302 Sleeping for 8s. Reason: PENDING
2024-12-05 14:59:35,559 Sleeping for 6s. Reason: PENDING
2024-12-05 14:59:41,810 Sleeping for 5s. Reason: PENDING
2024-12-05 14:59:47,061 Sleeping for 6s. Reason: PENDING
2024-12-05 14:59:53,321 Sleeping for 9s. Reason: RUNNING
2024-12-05 15:00:02,591 Sleeping for 8s. Reason: RUNNING
2024-12-05 15:00:10,848 Sleeping for 7s. Reason: RUNNING
2024-12-05 15:00:18,106 Sleeping for 9s. Reason: RUNNING
2024-12-05 15:00:27,381 Sleeping for 7s. Reason: RUNNING
2024-12-05 15:00:34,640 Sleeping for 7s. Reason: RUNNING
2024-12-05 15:00:42,057 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:00:52,322 Sleeping for 8s. Reason: RUNNING
2024-12-05 15:01:00,581 Sleeping for 7s. Reason: RUNNING
2024-12-05 15:01:11,478 Setting max_seq=508, max_extra_seq=2048
2024-12-05 15:03:31,523 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.4 pTM=0.401 ipTM=0.869
2024-12-05 15:03:44,880 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.6 pTM=0.384 ipTM=0.87 tol=8.07
2024-12-05 15:03:58,238 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71 pTM=0.387 ipTM=0.886 tol=5.33
2024-12-05 15:04:11,631 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71 pTM=0.384 ipTM=0.878 tol=3.25
2024-12-05 15:04:25,026 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.2 pTM=0.398 ipTM=0.884 tol=3.83
2024-12-05 15:04:38,432 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72 pTM=0.394 ipTM=0.879 tol=2.73
2024-12-05 15:04:51,856 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.5 pTM=0.402 ipTM=0.886 tol=3
2024-12-05 15:05:05,281 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.5 pTM=0.402 ipTM=0.882 tol=2.36
2024-12-05 15:05:18,705 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.9 pTM=0.409 ipTM=0.889 tol=2.49
2024-12-05 15:05:32,145 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.5 pTM=0.403 ipTM=0.882 tol=3.03
2024-12-05 15:05:45,585 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.9 pTM=0.408 ipTM=0.888 tol=1.89
2024-12-05 15:05:59,009 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.5 pTM=0.4 ipTM=0.885 tol=1.57
2024-12-05 15:06:12,458 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.8 pTM=0.408 ipTM=0.888 tol=1.58
2024-12-05 15:06:25,872 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.7 pTM=0.406 ipTM=0.884 tol=1.35
2024-12-05 15:06:39,324 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.6 pTM=0.406 ipTM=0.888 tol=1.22
2024-12-05 15:06:52,779 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.2 pTM=0.403 ipTM=0.884 tol=2.21
2024-12-05 15:07:06,244 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.4 pTM=0.405 ipTM=0.884 tol=2.32
2024-12-05 15:07:19,695 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.6 pTM=0.405 ipTM=0.884 tol=0.831
2024-12-05 15:07:33,113 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.8 pTM=0.411 ipTM=0.886 tol=0.817
2024-12-05 15:07:46,526 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.4 pTM=0.404 ipTM=0.884 tol=1.22
2024-12-05 15:07:59,993 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.2 pTM=0.403 ipTM=0.884 tol=1.57
2024-12-05 15:08:13,501 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.2 pTM=0.397 ipTM=0.885 tol=2.46
2024-12-05 15:08:27,009 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.3 pTM=0.401 ipTM=0.888 tol=1.18
2024-12-05 15:08:40,518 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.5 pTM=0.402 ipTM=0.887 tol=0.668
2024-12-05 15:08:53,996 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.4 pTM=0.405 ipTM=0.887 tol=1.01
2024-12-05 15:09:07,478 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72 pTM=0.4 ipTM=0.882 tol=1.09
2024-12-05 15:09:20,942 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.8 pTM=0.411 ipTM=0.889 tol=1.28
2024-12-05 15:09:34,418 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.6 pTM=0.405 ipTM=0.887 tol=0.86
2024-12-05 15:09:47,890 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.4 pTM=0.405 ipTM=0.886 tol=0.663
2024-12-05 15:10:01,375 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.6 pTM=0.407 ipTM=0.886 tol=0.771
2024-12-05 15:10:14,817 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.3 pTM=0.403 ipTM=0.887 tol=1.52
2024-12-05 15:10:14,818 alphafold2_multimer_v3_model_1_seed_000 took 538.1s (30 recycles)
2024-12-05 15:10:28,710 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=71.9 pTM=0.428 ipTM=0.887
2024-12-05 15:10:42,191 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72 pTM=0.407 ipTM=0.877 tol=8.4
2024-12-05 15:10:55,639 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.8 pTM=0.413 ipTM=0.879 tol=4.23
2024-12-05 15:11:09,094 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72 pTM=0.416 ipTM=0.876 tol=2.72
2024-12-05 15:11:22,547 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.1 pTM=0.418 ipTM=0.876 tol=1.43
2024-12-05 15:11:35,979 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.4 pTM=0.42 ipTM=0.878 tol=1.26
2024-12-05 15:11:49,429 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.3 pTM=0.423 ipTM=0.875 tol=0.768
2024-12-05 15:12:02,894 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.4 pTM=0.424 ipTM=0.878 tol=0.478
2024-12-05 15:12:02,894 alphafold2_multimer_v3_model_2_seed_000 took 107.7s (7 recycles)
2024-12-05 15:12:16,762 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.8 pTM=0.407 ipTM=0.843
2024-12-05 15:12:30,218 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=70.8 pTM=0.401 ipTM=0.852 tol=11.6
2024-12-05 15:12:43,671 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.6 pTM=0.438 ipTM=0.866 tol=7.98
2024-12-05 15:12:57,116 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.4 pTM=0.418 ipTM=0.854 tol=3.68
2024-12-05 15:13:10,560 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.9 pTM=0.428 ipTM=0.861 tol=2.92
2024-12-05 15:13:24,011 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.5 pTM=0.42 ipTM=0.859 tol=2.33
2024-12-05 15:13:37,434 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.6 pTM=0.424 ipTM=0.856 tol=1.45
2024-12-05 15:13:50,877 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.4 pTM=0.423 ipTM=0.856 tol=1.26
2024-12-05 15:14:04,301 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.6 pTM=0.426 ipTM=0.861 tol=1.64
2024-12-05 15:14:17,734 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.4 pTM=0.42 ipTM=0.856 tol=3.12
2024-12-05 15:14:31,183 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.7 pTM=0.427 ipTM=0.858 tol=3.47
2024-12-05 15:14:44,632 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71 pTM=0.414 ipTM=0.854 tol=3.69
2024-12-05 15:14:58,103 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.8 pTM=0.43 ipTM=0.862 tol=2.84
2024-12-05 15:15:11,564 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.4 pTM=0.422 ipTM=0.857 tol=2.31
2024-12-05 15:15:25,012 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72 pTM=0.435 ipTM=0.864 tol=2.33
2024-12-05 15:15:38,466 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.4 pTM=0.425 ipTM=0.858 tol=1.24
2024-12-05 15:15:51,928 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.9 pTM=0.433 ipTM=0.859 tol=1.33
2024-12-05 15:16:05,385 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.7 pTM=0.425 ipTM=0.863 tol=1.11
2024-12-05 15:16:18,841 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72 pTM=0.435 ipTM=0.862 tol=1.75
2024-12-05 15:16:32,303 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.2 pTM=0.417 ipTM=0.854 tol=1.7
2024-12-05 15:16:45,762 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.5 pTM=0.422 ipTM=0.859 tol=1.22
2024-12-05 15:16:59,231 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71 pTM=0.415 ipTM=0.855 tol=1.67
2024-12-05 15:17:12,629 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.6 pTM=0.428 ipTM=0.858 tol=1.68
2024-12-05 15:17:26,093 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.4 pTM=0.42 ipTM=0.858 tol=2.6
2024-12-05 15:17:39,554 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.8 pTM=0.433 ipTM=0.857 tol=1.89
2024-12-05 15:17:52,977 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.2 pTM=0.42 ipTM=0.851 tol=1.76
2024-12-05 15:18:06,426 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.8 pTM=0.429 ipTM=0.859 tol=2.46
2024-12-05 15:18:19,881 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.4 pTM=0.42 ipTM=0.858 tol=1.2
2024-12-05 15:18:33,321 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.7 pTM=0.43 ipTM=0.856 tol=1.39
2024-12-05 15:18:46,779 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.3 pTM=0.423 ipTM=0.857 tol=1.5
2024-12-05 15:19:00,247 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.9 pTM=0.434 ipTM=0.86 tol=1.13
2024-12-05 15:19:00,248 alphafold2_multimer_v3_model_3_seed_000 took 416.9s (30 recycles)
2024-12-05 15:19:14,128 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.5 pTM=0.415 ipTM=0.879
2024-12-05 15:19:27,625 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.5 pTM=0.386 ipTM=0.869 tol=11.5
2024-12-05 15:19:41,093 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.3 pTM=0.415 ipTM=0.873 tol=5.73
2024-12-05 15:19:54,575 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70 pTM=0.395 ipTM=0.858 tol=16.1
2024-12-05 15:20:08,056 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.9 pTM=0.419 ipTM=0.866 tol=15
2024-12-05 15:20:21,534 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.1 pTM=0.407 ipTM=0.86 tol=9.83
2024-12-05 15:20:34,962 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.8 pTM=0.43 ipTM=0.868 tol=5.28
2024-12-05 15:20:48,480 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.4 pTM=0.413 ipTM=0.864 tol=5.24
2024-12-05 15:21:01,990 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.4 pTM=0.425 ipTM=0.866 tol=6.12
2024-12-05 15:21:15,495 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.9 pTM=0.406 ipTM=0.859 tol=2.84
2024-12-05 15:21:28,999 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.7 pTM=0.428 ipTM=0.868 tol=2.74
2024-12-05 15:21:42,532 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.1 pTM=0.407 ipTM=0.861 tol=2.5
2024-12-05 15:21:56,024 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.9 pTM=0.436 ipTM=0.868 tol=2.63
2024-12-05 15:22:09,522 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.1 pTM=0.412 ipTM=0.861 tol=2.23
2024-12-05 15:22:23,009 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.6 pTM=0.432 ipTM=0.864 tol=2.22
2024-12-05 15:22:36,494 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.9 pTM=0.412 ipTM=0.862 tol=2.76
2024-12-05 15:22:49,978 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=71.3 pTM=0.428 ipTM=0.863 tol=2.32
2024-12-05 15:23:03,481 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71 pTM=0.414 ipTM=0.861 tol=2.42
2024-12-05 15:23:16,960 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.6 pTM=0.434 ipTM=0.864 tol=2.36
2024-12-05 15:23:30,445 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.8 pTM=0.41 ipTM=0.854 tol=1.91
2024-12-05 15:23:43,904 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.2 pTM=0.428 ipTM=0.861 tol=1.79
2024-12-05 15:23:57,375 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.7 pTM=0.408 ipTM=0.857 tol=2.92
2024-12-05 15:24:10,838 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.4 pTM=0.425 ipTM=0.858 tol=2.72
2024-12-05 15:24:24,329 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.9 pTM=0.411 ipTM=0.858 tol=1.79
2024-12-05 15:24:37,789 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.3 pTM=0.429 ipTM=0.859 tol=2.75
2024-12-05 15:24:51,267 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.6 pTM=0.412 ipTM=0.852 tol=2.92
2024-12-05 15:25:04,709 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.9 pTM=0.434 ipTM=0.867 tol=2.24
2024-12-05 15:25:18,199 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.1 pTM=0.413 ipTM=0.863 tol=1.89
2024-12-05 15:25:31,678 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.4 pTM=0.419 ipTM=0.861 tol=2.99
2024-12-05 15:25:45,163 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71 pTM=0.413 ipTM=0.862 tol=2.94
2024-12-05 15:25:58,633 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.4 pTM=0.422 ipTM=0.859 tol=1.84
2024-12-05 15:25:58,634 alphafold2_multimer_v3_model_4_seed_000 took 418.0s (30 recycles)
2024-12-05 15:26:12,534 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.5 pTM=0.402 ipTM=0.839
2024-12-05 15:26:26,030 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=70.8 pTM=0.403 ipTM=0.877 tol=9.55
2024-12-05 15:26:39,528 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.7 pTM=0.418 ipTM=0.886 tol=5.41
2024-12-05 15:26:53,026 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.2 pTM=0.417 ipTM=0.87 tol=5.11
2024-12-05 15:27:06,515 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.4 pTM=0.446 ipTM=0.88 tol=3.39
2024-12-05 15:27:20,008 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72 pTM=0.43 ipTM=0.873 tol=2.82
2024-12-05 15:27:33,466 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.9 pTM=0.435 ipTM=0.868 tol=2.67
2024-12-05 15:27:46,936 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71.8 pTM=0.424 ipTM=0.871 tol=1.78
2024-12-05 15:28:00,412 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.3 pTM=0.444 ipTM=0.876 tol=2.6
2024-12-05 15:28:13,889 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.9 pTM=0.427 ipTM=0.868 tol=1.49
2024-12-05 15:28:27,375 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.2 pTM=0.435 ipTM=0.875 tol=1.89
2024-12-05 15:28:40,857 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.6 pTM=0.423 ipTM=0.87 tol=2.56
2024-12-05 15:28:54,344 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.3 pTM=0.447 ipTM=0.876 tol=3.22
2024-12-05 15:29:07,816 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.4 pTM=0.428 ipTM=0.868 tol=15.4
2024-12-05 15:29:21,278 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.2 pTM=0.431 ipTM=0.876 tol=9.75
2024-12-05 15:29:34,735 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.5 pTM=0.421 ipTM=0.872 tol=5.11
2024-12-05 15:29:48,194 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.9 pTM=0.44 ipTM=0.873 tol=3.13
2024-12-05 15:30:01,669 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.9 pTM=0.429 ipTM=0.874 tol=2.54
2024-12-05 15:30:15,132 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.4 pTM=0.449 ipTM=0.875 tol=2.03
2024-12-05 15:30:28,599 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.7 pTM=0.427 ipTM=0.866 tol=3.04
2024-12-05 15:30:42,032 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.9 pTM=0.441 ipTM=0.871 tol=4.55
2024-12-05 15:30:55,483 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.6 pTM=0.422 ipTM=0.87 tol=4.9
2024-12-05 15:31:08,935 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72 pTM=0.442 ipTM=0.872 tol=4.59
2024-12-05 15:31:22,384 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.9 pTM=0.426 ipTM=0.868 tol=3.9
2024-12-05 15:31:35,844 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.1 pTM=0.447 ipTM=0.871 tol=5.09
2024-12-05 15:31:49,328 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.4 pTM=0.426 ipTM=0.863 tol=2.44
2024-12-05 15:32:02,776 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.2 pTM=0.446 ipTM=0.872 tol=3.67
2024-12-05 15:32:16,239 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.9 pTM=0.426 ipTM=0.869 tol=3.45
2024-12-05 15:32:29,716 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.9 pTM=0.439 ipTM=0.867 tol=2.27
2024-12-05 15:32:43,165 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.8 pTM=0.427 ipTM=0.868 tol=1.66
2024-12-05 15:32:56,627 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72.1 pTM=0.443 ipTM=0.868 tol=1.81
2024-12-05 15:32:56,627 alphafold2_multimer_v3_model_5_seed_000 took 417.6s (30 recycles)
2024-12-05 15:32:57,049 reranking models by 'multimer' metric
2024-12-05 15:33:01,135 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 15:33:56,098 Relaxation took 59.0s
2024-12-05 15:33:56,098 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.3 pTM=0.403 ipTM=0.887
2024-12-05 15:34:45,241 Relaxation took 49.1s
2024-12-05 15:34:45,241 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.4 pTM=0.424 ipTM=0.878
2024-12-05 15:35:20,892 Relaxation took 35.6s
2024-12-05 15:35:20,892 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72.1 pTM=0.443 ipTM=0.868
2024-12-05 15:36:07,560 Relaxation took 46.7s
2024-12-05 15:36:07,560 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.9 pTM=0.434 ipTM=0.86
2024-12-05 15:36:53,413 Relaxation took 45.9s
2024-12-05 15:36:53,413 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.4 pTM=0.422 ipTM=0.859
2024-12-05 15:36:54,885 Done