2024-12-05 15:23:33,159 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-05 15:23:33,473 Running on GPU
2024-12-05 15:23:37,559 Found 6 citations for tools or databases
2024-12-05 15:23:37,559 Query 1/1: E4F1_HIC2 (length 1399)
2024-12-05 15:23:39,336 Sleeping for 8s. Reason: PENDING
2024-12-05 15:23:47,600 Sleeping for 9s. Reason: RUNNING
2024-12-05 15:23:56,863 Sleeping for 8s. Reason: RUNNING
2024-12-05 15:24:05,120 Sleeping for 9s. Reason: RUNNING
2024-12-05 15:24:14,374 Sleeping for 9s. Reason: RUNNING
2024-12-05 15:24:23,631 Sleeping for 6s. Reason: RUNNING
2024-12-05 15:24:29,893 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:24:40,164 Sleeping for 7s. Reason: RUNNING
2024-12-05 15:24:47,428 Sleeping for 8s. Reason: RUNNING
2024-12-05 15:24:55,689 Sleeping for 9s. Reason: RUNNING
2024-12-05 15:25:04,947 Sleeping for 5s. Reason: RUNNING
2024-12-05 15:25:10,209 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:25:20,470 Sleeping for 8s. Reason: RUNNING
2024-12-05 15:25:28,721 Sleeping for 7s. Reason: RUNNING
2024-12-05 15:25:35,975 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:25:46,233 Sleeping for 9s. Reason: RUNNING
2024-12-05 15:25:55,489 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:26:05,762 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:26:16,027 Sleeping for 10s. Reason: RUNNING
2024-12-05 15:26:29,095 Setting max_seq=508, max_extra_seq=2048
2024-12-05 15:30:06,687 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=35.9 pTM=0.243 ipTM=0.182
2024-12-05 15:31:00,689 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=35.6 pTM=0.233 ipTM=0.172 tol=11.4
2024-12-05 15:31:54,971 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=35.9 pTM=0.228 ipTM=0.175 tol=7.48
2024-12-05 15:32:49,408 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=35.9 pTM=0.231 ipTM=0.172 tol=5.47
2024-12-05 15:33:43,925 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=35.7 pTM=0.231 ipTM=0.167 tol=4.34
2024-12-05 15:34:38,470 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=35.6 pTM=0.23 ipTM=0.166 tol=4.03
2024-12-05 15:35:33,029 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=35.5 pTM=0.231 ipTM=0.168 tol=4.7
2024-12-05 15:36:27,586 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=35.7 pTM=0.231 ipTM=0.17 tol=4.67
2024-12-05 15:37:22,148 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=35.6 pTM=0.231 ipTM=0.17 tol=4.39
2024-12-05 15:38:16,721 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=36 pTM=0.231 ipTM=0.17 tol=4.2
2024-12-05 15:39:11,276 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=35.2 pTM=0.231 ipTM=0.17 tol=3.11
2024-12-05 15:40:05,813 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=35.6 pTM=0.231 ipTM=0.168 tol=2.38
2024-12-05 15:41:00,392 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=35.7 pTM=0.23 ipTM=0.166 tol=2.98
2024-12-05 15:41:54,957 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=35.6 pTM=0.231 ipTM=0.167 tol=2.96
2024-12-05 15:42:49,502 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=35.6 pTM=0.232 ipTM=0.166 tol=2.98
2024-12-05 15:43:44,005 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=35.4 pTM=0.232 ipTM=0.167 tol=2.91
2024-12-05 15:44:38,477 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=36.2 pTM=0.231 ipTM=0.165 tol=3.21
2024-12-05 15:45:32,925 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=35.8 pTM=0.231 ipTM=0.165 tol=3.1
2024-12-05 15:46:27,349 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=35.5 pTM=0.232 ipTM=0.165 tol=3.06
2024-12-05 15:47:21,771 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=35.4 pTM=0.231 ipTM=0.166 tol=3.44
2024-12-05 15:48:16,201 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=35.6 pTM=0.229 ipTM=0.165 tol=6.86
2024-12-05 15:49:10,679 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=35.6 pTM=0.23 ipTM=0.166 tol=5.95
2024-12-05 15:50:05,186 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=35.5 pTM=0.23 ipTM=0.166 tol=3.92
2024-12-05 15:50:59,703 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=35.9 pTM=0.23 ipTM=0.165 tol=3.51
2024-12-05 15:51:54,203 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=35.5 pTM=0.23 ipTM=0.166 tol=3.39
2024-12-05 15:52:48,723 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=35.8 pTM=0.229 ipTM=0.165 tol=3.42
2024-12-05 15:53:43,276 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=35.7 pTM=0.229 ipTM=0.166 tol=3.43
2024-12-05 15:54:37,856 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=35.6 pTM=0.229 ipTM=0.165 tol=4.83
2024-12-05 15:55:32,441 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=35.5 pTM=0.228 ipTM=0.164 tol=5.42
2024-12-05 15:56:27,039 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=36.1 pTM=0.23 ipTM=0.166 tol=3.22
2024-12-05 15:57:21,649 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=35.5 pTM=0.23 ipTM=0.166 tol=2.87
2024-12-05 15:57:21,650 alphafold2_multimer_v3_model_1_seed_000 took 1842.8s (30 recycles)
2024-12-05 15:58:17,223 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=35.8 pTM=0.224 ipTM=0.171
2024-12-05 15:59:11,725 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=36.5 pTM=0.226 ipTM=0.166 tol=15.6
2024-12-05 16:00:06,280 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=37.1 pTM=0.221 ipTM=0.173 tol=11.8
2024-12-05 16:01:00,829 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=37.7 pTM=0.222 ipTM=0.171 tol=11.2
2024-12-05 16:01:55,378 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=38.3 pTM=0.222 ipTM=0.169 tol=5.15
2024-12-05 16:02:49,912 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=38.1 pTM=0.221 ipTM=0.163 tol=6.39
2024-12-05 16:03:44,445 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=38 pTM=0.221 ipTM=0.161 tol=5.38
2024-12-05 16:04:39,000 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=38.3 pTM=0.221 ipTM=0.162 tol=5.07
2024-12-05 16:05:33,536 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=38.7 pTM=0.222 ipTM=0.162 tol=4.27
2024-12-05 16:06:28,106 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=38.7 pTM=0.221 ipTM=0.161 tol=3.94
2024-12-05 16:07:22,679 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=38.3 pTM=0.221 ipTM=0.162 tol=4
2024-12-05 16:08:17,224 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=38.8 pTM=0.222 ipTM=0.163 tol=3.99
2024-12-05 16:09:11,742 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=38.9 pTM=0.221 ipTM=0.16 tol=4.52
2024-12-05 16:10:06,243 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=38.7 pTM=0.222 ipTM=0.162 tol=3.03
2024-12-05 16:11:00,726 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=38.8 pTM=0.221 ipTM=0.162 tol=2.52
2024-12-05 16:11:55,197 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=38.7 pTM=0.223 ipTM=0.163 tol=3.32
2024-12-05 16:12:49,700 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=39.1 pTM=0.221 ipTM=0.163 tol=2.96
2024-12-05 16:13:44,241 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=38.7 pTM=0.222 ipTM=0.162 tol=2.65
2024-12-05 16:14:38,802 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=38.3 pTM=0.222 ipTM=0.16 tol=2.84
2024-12-05 16:15:33,345 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=38.5 pTM=0.222 ipTM=0.161 tol=2.15
2024-12-05 16:16:27,926 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=38.5 pTM=0.222 ipTM=0.16 tol=2.56
2024-12-05 16:17:22,466 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=38.8 pTM=0.222 ipTM=0.159 tol=2.47
2024-12-05 16:18:16,963 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=38.7 pTM=0.222 ipTM=0.16 tol=2.5
2024-12-05 16:19:11,428 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=38.9 pTM=0.222 ipTM=0.158 tol=1.93
2024-12-05 16:20:05,839 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=38.2 pTM=0.222 ipTM=0.16 tol=2.39
2024-12-05 16:21:00,253 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=38.3 pTM=0.222 ipTM=0.161 tol=2.37
2024-12-05 16:21:54,621 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=38.1 pTM=0.222 ipTM=0.16 tol=2.36
2024-12-05 16:22:48,996 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=38.5 pTM=0.223 ipTM=0.161 tol=2.41
2024-12-05 16:23:43,406 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=38.2 pTM=0.222 ipTM=0.161 tol=2.58
2024-12-05 16:24:37,903 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=38.7 pTM=0.222 ipTM=0.16 tol=2.17
2024-12-05 16:25:32,367 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=38 pTM=0.222 ipTM=0.161 tol=2.6
2024-12-05 16:25:32,368 alphafold2_multimer_v3_model_2_seed_000 took 1689.5s (30 recycles)
2024-12-05 16:26:28,245 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=34.8 pTM=0.244 ipTM=0.195
2024-12-05 16:27:23,093 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=35.3 pTM=0.234 ipTM=0.182 tol=19.5
2024-12-05 16:28:18,003 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=35.5 pTM=0.226 ipTM=0.169 tol=17.8
2024-12-05 16:29:12,982 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=35.8 pTM=0.225 ipTM=0.167 tol=8.06
2024-12-05 16:30:08,005 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=35.7 pTM=0.225 ipTM=0.17 tol=7.29
2024-12-05 16:31:02,934 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=35.8 pTM=0.224 ipTM=0.164 tol=5.94
2024-12-05 16:31:57,758 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=35.8 pTM=0.224 ipTM=0.17 tol=6.38
2024-12-05 16:32:52,470 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=36 pTM=0.224 ipTM=0.165 tol=6.69
2024-12-05 16:33:47,145 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=36.2 pTM=0.224 ipTM=0.17 tol=7.21
2024-12-05 16:34:41,847 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=36.3 pTM=0.224 ipTM=0.165 tol=4.21
2024-12-05 16:35:36,665 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=36 pTM=0.225 ipTM=0.17 tol=3.81
2024-12-05 16:36:31,484 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=36.1 pTM=0.226 ipTM=0.166 tol=3.08
2024-12-05 16:37:26,368 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=36.3 pTM=0.224 ipTM=0.168 tol=3.65
2024-12-05 16:38:21,267 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=36.2 pTM=0.224 ipTM=0.167 tol=4.16
2024-12-05 16:39:16,167 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=36 pTM=0.224 ipTM=0.168 tol=6.05
2024-12-05 16:40:11,122 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=36.2 pTM=0.224 ipTM=0.164 tol=3.78
2024-12-05 16:41:06,080 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=36.4 pTM=0.223 ipTM=0.166 tol=6.66
2024-12-05 16:42:01,056 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=36 pTM=0.224 ipTM=0.164 tol=2.77
2024-12-05 16:42:55,928 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=36 pTM=0.224 ipTM=0.168 tol=2.63
2024-12-05 16:43:50,828 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=36 pTM=0.224 ipTM=0.165 tol=3.6
2024-12-05 16:44:45,713 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=36.2 pTM=0.224 ipTM=0.167 tol=6.25
2024-12-05 16:45:40,617 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=36.3 pTM=0.224 ipTM=0.165 tol=2.95
2024-12-05 16:46:35,540 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=36.2 pTM=0.224 ipTM=0.167 tol=8.12
2024-12-05 16:47:30,462 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=36.4 pTM=0.224 ipTM=0.167 tol=7.8
2024-12-05 16:48:25,396 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=36.3 pTM=0.224 ipTM=0.167 tol=5.62
2024-12-05 16:49:20,292 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=36.2 pTM=0.224 ipTM=0.166 tol=8.66
2024-12-05 16:50:15,136 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=36 pTM=0.224 ipTM=0.167 tol=9.52
2024-12-05 16:51:10,000 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=36.1 pTM=0.224 ipTM=0.166 tol=7.91
2024-12-05 16:52:04,862 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=36.1 pTM=0.224 ipTM=0.167 tol=4.21
2024-12-05 16:52:59,710 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=36.1 pTM=0.224 ipTM=0.166 tol=3.06
2024-12-05 16:53:54,581 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=35.8 pTM=0.224 ipTM=0.167 tol=3.22
2024-12-05 16:53:54,583 alphafold2_multimer_v3_model_3_seed_000 took 1701.0s (30 recycles)
2024-12-05 16:54:50,559 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=33.9 pTM=0.236 ipTM=0.221
2024-12-05 16:55:45,245 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=35.8 pTM=0.238 ipTM=0.228 tol=16.1
2024-12-05 16:56:40,031 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=36.8 pTM=0.234 ipTM=0.224 tol=10.4
2024-12-05 16:57:34,872 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=37.1 pTM=0.234 ipTM=0.205 tol=8.6
2024-12-05 16:58:29,792 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=36.9 pTM=0.23 ipTM=0.18 tol=4.89
2024-12-05 16:59:24,641 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=36.8 pTM=0.232 ipTM=0.184 tol=5.78
2024-12-05 17:00:19,537 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=37.2 pTM=0.231 ipTM=0.18 tol=7.43
2024-12-05 17:01:14,384 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=36.7 pTM=0.23 ipTM=0.182 tol=5.76
2024-12-05 17:02:09,274 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=37.1 pTM=0.234 ipTM=0.186 tol=6.8
2024-12-05 17:03:04,160 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=37.1 pTM=0.237 ipTM=0.192 tol=6.41
2024-12-05 17:03:59,048 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=36.6 pTM=0.231 ipTM=0.178 tol=10.8
2024-12-05 17:04:53,954 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=36.6 pTM=0.23 ipTM=0.179 tol=11
2024-12-05 17:05:48,825 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=36.7 pTM=0.231 ipTM=0.18 tol=8.23
2024-12-05 17:06:43,629 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=36.9 pTM=0.234 ipTM=0.184 tol=7.73
2024-12-05 17:07:38,336 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=36.5 pTM=0.232 ipTM=0.18 tol=7.4
2024-12-05 17:08:33,035 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=36.8 pTM=0.233 ipTM=0.181 tol=6.31
2024-12-05 17:09:27,875 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=36.7 pTM=0.232 ipTM=0.183 tol=6.48
2024-12-05 17:10:22,749 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=36.6 pTM=0.231 ipTM=0.18 tol=7.71
2024-12-05 17:11:17,649 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=36.7 pTM=0.231 ipTM=0.179 tol=6.13
2024-12-05 17:12:12,541 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=36.7 pTM=0.233 ipTM=0.183 tol=5.32
2024-12-05 17:13:07,403 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=37.1 pTM=0.233 ipTM=0.184 tol=4.12
2024-12-05 17:14:02,234 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=36.5 pTM=0.232 ipTM=0.183 tol=5.84
2024-12-05 17:14:57,036 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=36.9 pTM=0.233 ipTM=0.181 tol=5.05
2024-12-05 17:15:51,812 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=36.7 pTM=0.232 ipTM=0.182 tol=4.75
2024-12-05 17:16:46,607 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=37 pTM=0.233 ipTM=0.182 tol=7.48
2024-12-05 17:17:41,493 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=37 pTM=0.232 ipTM=0.18 tol=7.36
2024-12-05 17:18:36,466 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=37 pTM=0.231 ipTM=0.179 tol=6.3
2024-12-05 17:19:31,393 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=37.2 pTM=0.232 ipTM=0.181 tol=4.8
2024-12-05 17:20:26,270 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=37 pTM=0.232 ipTM=0.18 tol=6.93
2024-12-05 17:21:21,107 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=36.7 pTM=0.23 ipTM=0.179 tol=6.56
2024-12-05 17:22:15,870 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=36.8 pTM=0.232 ipTM=0.181 tol=3.74
2024-12-05 17:22:15,871 alphafold2_multimer_v3_model_4_seed_000 took 1700.1s (30 recycles)
2024-12-05 17:23:11,740 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=35.1 pTM=0.228 ipTM=0.172
2024-12-05 17:24:06,519 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=36.7 pTM=0.222 ipTM=0.197 tol=20.3
2024-12-05 17:25:01,474 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=36.2 pTM=0.222 ipTM=0.165 tol=18.6
2024-12-05 17:25:56,433 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=36.4 pTM=0.223 ipTM=0.171 tol=11.9
2024-12-05 17:26:51,424 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=36.8 pTM=0.223 ipTM=0.168 tol=8.71
2024-12-05 17:27:46,406 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=36.8 pTM=0.223 ipTM=0.165 tol=12.1
2024-12-05 17:28:41,399 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=37.1 pTM=0.224 ipTM=0.166 tol=12.8
2024-12-05 17:29:36,383 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=36.7 pTM=0.225 ipTM=0.164 tol=11.9
2024-12-05 17:30:31,335 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=36.8 pTM=0.225 ipTM=0.166 tol=10.5
2024-12-05 17:31:26,336 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=36.9 pTM=0.227 ipTM=0.168 tol=4.97
2024-12-05 17:32:21,315 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=36.7 pTM=0.228 ipTM=0.172 tol=5.11
2024-12-05 17:33:16,301 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=36.6 pTM=0.229 ipTM=0.168 tol=4.05
2024-12-05 17:34:11,259 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=36.8 pTM=0.227 ipTM=0.167 tol=3.4
2024-12-05 17:35:06,265 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=36.8 pTM=0.229 ipTM=0.173 tol=6.62
2024-12-05 17:36:01,251 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=36.7 pTM=0.229 ipTM=0.173 tol=5.61
2024-12-05 17:36:56,242 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=36.8 pTM=0.229 ipTM=0.172 tol=5.01
2024-12-05 17:37:51,257 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=36.8 pTM=0.226 ipTM=0.167 tol=5.71
2024-12-05 17:38:46,238 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=36.8 pTM=0.226 ipTM=0.165 tol=4.82
2024-12-05 17:39:41,228 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=36.9 pTM=0.227 ipTM=0.168 tol=4.87
2024-12-05 17:40:36,175 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=36.8 pTM=0.226 ipTM=0.167 tol=5.88
2024-12-05 17:41:31,106 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=37 pTM=0.227 ipTM=0.166 tol=6.24
2024-12-05 17:42:26,046 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=36.8 pTM=0.227 ipTM=0.166 tol=6.98
2024-12-05 17:43:20,929 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=36.7 pTM=0.228 ipTM=0.167 tol=5.21
2024-12-05 17:44:15,861 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=36.8 pTM=0.228 ipTM=0.167 tol=8.02
2024-12-05 17:45:10,803 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=36.8 pTM=0.228 ipTM=0.167 tol=6.61
2024-12-05 17:46:05,783 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=37.1 pTM=0.227 ipTM=0.167 tol=7.25
2024-12-05 17:47:00,747 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=36.8 pTM=0.227 ipTM=0.165 tol=5.33
2024-12-05 17:47:55,725 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=37.1 pTM=0.227 ipTM=0.167 tol=5.86
2024-12-05 17:48:50,720 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=36.8 pTM=0.226 ipTM=0.166 tol=4.09
2024-12-05 17:49:45,706 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=36.9 pTM=0.226 ipTM=0.167 tol=3.99
2024-12-05 17:50:40,610 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=36.7 pTM=0.227 ipTM=0.167 tol=3.31
2024-12-05 17:50:40,611 alphafold2_multimer_v3_model_5_seed_000 took 1703.6s (30 recycles)
2024-12-05 17:50:41,767 reranking models by 'multimer' metric
2024-12-05 17:50:45,909 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-05 17:54:00,642 Relaxation took 198.9s
2024-12-05 17:54:00,642 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=36.8 pTM=0.232 ipTM=0.181
2024-12-05 17:56:58,624 Relaxation took 178.0s
2024-12-05 17:56:58,624 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=35.5 pTM=0.23 ipTM=0.166
2024-12-05 17:59:16,493 Relaxation took 137.9s
2024-12-05 17:59:16,494 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=36.7 pTM=0.227 ipTM=0.167
2024-12-05 18:02:44,727 Relaxation took 208.2s
2024-12-05 18:02:44,727 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=35.8 pTM=0.224 ipTM=0.167
2024-12-05 18:06:14,078 Relaxation took 209.3s
2024-12-05 18:06:14,078 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=38 pTM=0.222 ipTM=0.161
2024-12-05 18:06:16,932 Done